Citrus Sinensis ID: 023438

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHccccccccEEEEcccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccHHHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHcccccEEEEEccccccccccccccccEEEHEHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEcccHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHccc
Coil and Loop (DISEMBL)
mklwlfnrkgpsgfsasstaeevtdgidgsglTAIVTGATSGIGTETARVLALRGVHVVMGvrdiaagkdVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILInnagimgtpfmlskdnIELQFATNHLGHFLLTNLLLDTMKKTArksggegriinvsseghrlayhegirfdkindpsgyngfrAYSQSKLANILHANELARRLkedgvditansvhpgaiatniirhnsLFRSMNTILhalpgiagkcLLKNVQQVILNFQKQRNKI
Flexible Loop (DISEMBL)
mklwlfnrkgpsgfsassTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMgvrdiaagkdvketIVKEipsakvdaMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTarksggegriinvsseghRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDItansvhpgaiaTNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Low Complexity Region (SEG)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAtnhlghflltnlllDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Disordered region (IsUnstruct)
**************************IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKT*******GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNF*******
Disordered Region (DISOPRED)
*KLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQ******
Disordered Region (DISEMBL)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Disordered Region (DISPRO)
***************A*******TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRN**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILNFQKQRNKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.925	0.825	0.706	1e-105
A2RVM0	322	Short-chain dehydrogenase	no	no	0.929	0.813	0.671	1e-101
Q5F389	414	WW domain-containing oxid	yes	no	0.833	0.567	0.403	1e-43
Q91WL8	414	WW domain-containing oxid	yes	no	0.769	0.524	0.408	3e-42
Q9NZC7	414	WW domain-containing oxid	yes	no	0.833	0.567	0.392	4e-41
Q5R9W5	414	WW domain-containing oxid	yes	no	0.833	0.567	0.385	4e-40
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.765	0.679	0.434	9e-38
O74959	339	Uncharacterized oxidoredu	yes	no	0.829	0.690	0.386	5e-36
P59837	316	Retinol dehydrogenase 12	no	no	0.730	0.651	0.421	1e-35
Q9HBH5	336	Retinol dehydrogenase 14	no	no	0.716	0.601	0.435	1e-35

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  382 bits (982), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/269 (70%), Positives = 220/269 (81%), Gaps = 8/269 (2%)

Query: 3   LWLFN-RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG 61
           +W F+ +KG SGFS SSTAE+VT GID +GLTAIVTGA+SGIG ET RVLALRG HV+MG
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 62  VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           VR++ A KDVK+TI+K+IPSAKVDA+ELDLSSL SV+ FASE+N     LNILINNAGIM
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
             PF LSKDNIELQFATNH+GHFLLTNLLLDTMKKT R+S  EGRI+NV+SE HR AY E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           GIRFDKIND S YN +RAY QSKLAN+LHAN+L + LKEDGV+ITANS+HPG I TN+ R
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR 240

Query: 242 HNSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           HNS        ++ L  + GK +LKNVQQ
Sbjct: 241 HNS-------AVNGLINVIGKLVLKNVQQ 262

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  366 bits (940), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/268 (67%), Positives = 209/268 (77%), Gaps = 6/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F  KG SGFS+ STAEEVT G+DG+GLTAIVTGA+SGIG ETARVL+LRGVHVVM V
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+  +G  VKE IVK++P AK+D MELDLSS+ SVR FASEY      LN+LINNAGIM 
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDNIELQFATNHLGHFLLT LLLDTMK T+R+S  EGRI+N+SSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           +RFDKIND S Y+  RAY QSKL N+LHANEL ++LKEDGV+ITANS+HPGAI TN+ R+
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
                  N  L    G   K +LK+V Q
Sbjct: 241 ------FNPYLAVAVGAVAKYILKSVPQ 262

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 157/270 (58%), Gaps = 35/270 (12%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  +STA E+  G D SG   I+TGA SGIG ETA+  AL G +V++  R+++ G D  +
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+SL SV+NFA  +  ++  L+IL+ NA I G+ + L++D +E
Sbjct: 167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D +++++       R++ VSSE H        RF +I D SG
Sbjct: 227 STFQVNHLGHFYLVQLLEDILRRSS-----PARVVVVSSESH--------RFTEIKDSSG 273

Query: 194 -------------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
                        Y    AY++SKL NIL +NEL RRL   GV  T+NSVHPG    N+I
Sbjct: 274 KLDFSLLSPSKKEYWAMLAYNRSKLCNILFSNELNRRLSPHGV--TSNSVHPG----NMI 327

Query: 241 RHNSLFRSMNTILHALPGIAGKCLLKNVQQ 270
            ++S+ R  N  ++ L     +   K++QQ
Sbjct: 328 -YSSIHR--NWWVYTLLFTLARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 139/245 (56%), Gaps = 28/245 (11%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R+++   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+ L SV++FA  +  ++  L++L+ NAG    P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + +++       R+I VSSE H        RF  IND SG
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSS-----PARVIVVSSESH--------RFTDINDSSG 273

Query: 194 -------------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
                        Y    AY++SKL NIL +NEL RRL   GV  T+N+VHPG +  + I
Sbjct: 274 KLDLSRLSPPRSDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSAI 331

Query: 241 RHNSL 245
             NS 
Sbjct: 332 HRNSW 336

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  168 bits (425), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/270 (39%), Positives = 149/270 (55%), Gaps = 35/270 (12%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R++A   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+ L SV++FA  +  ++  L++L+ NA     P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + ++A       R+I VSSE H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 194 -------------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
                        Y    AY++SKL NIL +NEL RRL   GV  T+N+VHPG +  + I
Sbjct: 274 KLDFSRLSPTKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSNI 331

Query: 241 RHNSLFRSMNTILHALPGIAGKCLLKNVQQ 270
            H S +  + T+L  L     +   K++QQ
Sbjct: 332 -HRSWW--VYTLLFTL----ARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  165 bits (417), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 149/270 (55%), Gaps = 35/270 (12%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R++A   +   
Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+A+ LDL+ L SV++FA  +  ++  L++L+ NA     P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + ++A       R+I VSSE H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 194 -------------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
                        Y    AY++SKL N+L +NEL RRL   GV  T+N+VHPG +  + I
Sbjct: 274 KLDFSRLSPTKNDYWAMLAYNRSKLCNVLFSNELHRRLSPRGV--TSNAVHPGNMMYSNI 331

Query: 241 RHNSLFRSMNTILHALPGIAGKCLLKNVQQ 270
            H S +  + T+L  L     +   K++QQ
Sbjct: 332 -HRSWW--VYTLLFTL----ARPFTKSMQQ 354

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  157 bits (397), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 132/228 (57%), Gaps = 12/228 (5%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
            T  +   G   +VTGA +GIG ETA+ LA RG  V +  RD+  G+ V + I     + 
Sbjct: 33  CTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQ 92

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG 142
           +V   +LDLS   S+R FA  +  +   L++LINNAG+M  P+  + D  E+    NHLG
Sbjct: 93  QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLG 152

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDPSGYNGFRAYS 201
           HFLLT+LLL+ +K++A       RI+NVSS    LA+H G I F  +     YN   AY 
Sbjct: 153 HFLLTHLLLEKLKESA-----PSRIVNVSS----LAHHLGRIHFHNLQGEKFYNAGLAYC 203

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 249
            SKLANIL   ELARRLK  GV  T  SVHPG + + ++RH+S  R M
Sbjct: 204 HSKLANILFTQELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMRWM 249

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score =  151 bits (382), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 141/251 (56%), Gaps = 17/251 (6%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           D  D +G  A+VTG++ GIG  TA  LA +G  V +  R+    + V + I  E+  +K+
Sbjct: 36  DIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKI 95

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHF 144
             + LDL    SV   A  +  +  +L+IL+NNAGIM  PF L+KD  ELQ  TN+L H+
Sbjct: 96  RFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHY 155

Query: 145 LLTNLLLDTMKKTARKS-GGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG-FRAYSQ 202
           L T LLL T+++TA +   G+ RI++V+S  +  A + GI F  +N P    G F  Y Q
Sbjct: 156 LFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIYFPDLNLPHVLLGTFARYGQ 215

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 262
           SK A IL++  LA+RL++ G  I + S+HPG I T + R++             P  A K
Sbjct: 216 SKYAQILYSIALAKRLEKYG--IYSVSLHPGVIRTELTRYS-------------PTFALK 260

Query: 263 CLLKNVQQVIL 273
            L K+V Q +L
Sbjct: 261 LLEKSVFQYLL 271

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  150 bits (379), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/216 (42%), Positives = 126/216 (58%), Gaps = 10/216 (4%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   ++TGA +GIG ETAR LA RG  V +  RD+  G+     I  +  +++V   +LD
Sbjct: 39  GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           LS   S+R FA  +  +  QL+ILINNAG+M  P+  + D  E   A NHLGHFLLT+LL
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLL 158

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  +K++A       R++N+SS  H L     IRF  +     YN   AY  SKLAN+L 
Sbjct: 159 LGRLKESA-----PARVVNLSSVAHHLG---KIRFHDLQGDKYYNLGFAYCHSKLANVLF 210

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF 246
             ELA+RLK  G  +T  +VHPG + + ++RH+ L 
Sbjct: 211 TRELAKRLK--GTGVTTYAVHPGIVRSKLVRHSFLL 244

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  150 bits (379), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/225 (43%), Positives = 130/225 (57%), Gaps = 23/225 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-------PSAK 83
           G T ++TGA SG+G  TA  L   G  V+MG RD A  ++    + +E+       P   
Sbjct: 43  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 84  VDAM------ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA 137
           V  +      ELDL+SL SVR F  E   +  +L++LINNAGI   P+M ++D  E+QF 
Sbjct: 103 VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            NHLGHFLLTNLLL  +K +A       RI+ VSS   +L  +  I FD +N    YN  
Sbjct: 163 VNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSS---KLYKYGDINFDDLNSEQSYNKS 214

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             YS+SKLANIL   ELARRL  +G ++T N +HPG + TN+ RH
Sbjct: 215 FCYSRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRH 257

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
225464515	313	PREDICTED: short-chain dehydrogenase TIC	0.925	0.833	0.764	1e-113
363814467	313	uncharacterized protein LOC100796920 [Gl	0.925	0.833	0.731	1e-109
388510126	313	unknown [Lotus japonicus]	0.925	0.833	0.735	1e-108
224134877	319	predicted protein [Populus trichocarpa]	0.946	0.836	0.768	1e-108
359490491	313	PREDICTED: short-chain dehydrogenase TIC	0.921	0.830	0.746	1e-107
358248796	349	uncharacterized protein LOC100783465 [Gl	0.929	0.750	0.724	1e-107
359490488	313	PREDICTED: short-chain dehydrogenase TIC	0.925	0.833	0.727	1e-107
225426446	315	PREDICTED: short-chain dehydrogenase TIC	0.925	0.828	0.712	1e-106
255545238	313	short-chain dehydrogenase, putative [Ric	0.925	0.833	0.753	1e-105
224122326	344	predicted protein [Populus trichocarpa]	0.946	0.776	0.746	1e-105

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/268 (76%), Positives = 225/268 (83%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F+RKGPSGFSASSTAEEVT GIDG+GLTAIVTGA+SGIGTET RVLALRGVHVVMGV
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+++AGK+VKE IVKEIP+AKVDAMELDLSS+ASVR FASEYN     LNILINNAGIM 
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            P+MLSKDNIE+QFATNHLGHFLLTNLLLDTMKKT RKS  EGRI+NVSS  HR  Y EG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFDKIND SGY+   AY QSKLAN+LHANELARR KEDGVDITANS+HPGAI TN+ R 
Sbjct: 181 IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           +S       I+  L    GK +LKNVQQ
Sbjct: 241 SS-------IVSGLVNTVGKLVLKNVQQ 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814467|ref|NP_001242868.1| uncharacterized protein LOC100796920 [Glycine max] gi|255638702|gb|ACU19656.1| unknown [Glycine max]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/268 (73%), Positives = 223/268 (83%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF RKG SGFS+SSTAE+VT+GIDG+G TAIVTGA+SGIGTET RVLALRGVHV+MGV
Sbjct: 1   MWLFGRKGASGFSSSSTAEQVTEGIDGTGFTAIVTGASSGIGTETTRVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ A KDVKETI+KEIPSAKVDAMELDLSS+ SVR FASE+      LNILINNAGIM 
Sbjct: 61  RNMLAAKDVKETILKEIPSAKVDAMELDLSSMKSVRKFASEFKSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PF LSKD IELQFATNH+GHFLLTNLLLDT+KKT+R+S  EGRI+NVSSE HR AY EG
Sbjct: 121 CPFSLSKDKIELQFATNHIGHFLLTNLLLDTIKKTSRESKKEGRIVNVSSEAHRFAYSEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           I FDKIND S Y+ +RAY QSKLANILHANEL RRLKEDGVDI+ANS+HPG I TN+ RH
Sbjct: 181 ICFDKINDESSYDNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGTITTNLFRH 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           NS        ++ L  + G+ +LKNVQQ
Sbjct: 241 NS-------AVNGLINVIGRLVLKNVQQ 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510126|gb|AFK43129.1| unknown [Lotus japonicus]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/268 (73%), Positives = 226/268 (84%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F++KGPSGFS+SSTAE+VT GIDG+GLTA+VTGA+SGIGTET RVLA RGVHV+MGV
Sbjct: 1   MWPFSKKGPSGFSSSSTAEQVTQGIDGTGLTAVVTGASSGIGTETTRVLAKRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+ AAGKDVKETI+KE PSAKVDAMELDLSS+ SV+ FASEY      LNILINNAGIM 
Sbjct: 61  RNTAAGKDVKETILKENPSAKVDAMELDLSSMESVKKFASEYKSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDN ELQFATNHLGHFLLTNLLLDTMKKT+R+S  EGRI+ VSSE HR AY EG
Sbjct: 121 CPFMLSKDNHELQFATNHLGHFLLTNLLLDTMKKTSRESKKEGRIVIVSSEAHRFAYSEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFDKIND S YN +RAY QSKLANILHANEL + LKEDGVDITANS+HPG I TN+ R+
Sbjct: 181 IRFDKINDQSSYNNWRAYGQSKLANILHANELTKHLKEDGVDITANSLHPGTITTNLFRY 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           NS   ++N I++    + G+ ++KNVQQ
Sbjct: 241 NS---AVNGIIN----VVGRMVMKNVQQ 261

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134877|ref|XP_002321927.1| predicted protein [Populus trichocarpa] gi|222868923|gb|EEF06054.1| predicted protein [Populus trichocarpa]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/268 (76%), Positives = 228/268 (85%), Gaps = 1/268 (0%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLFNRKG SGFS+SSTAEEVT G+D SGLTAIVTGA+SGIGTETARVLALRGVHV+MGV
Sbjct: 1   MWLFNRKGSSGFSSSSTAEEVTHGVDASGLTAIVTGASSGIGTETARVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++AAG+DVKE IVKEIPSAKVDAMELDLSSLASVRNFAS++N   H LN+LINNAGIM 
Sbjct: 61  RNMAAGRDVKEAIVKEIPSAKVDAMELDLSSLASVRNFASDFNSSGHPLNLLINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDN+ELQFATN+LGHFLL NLLLDTMKKTA +S  EGRIINVSSE HR  Y EG
Sbjct: 121 PPFMLSKDNMELQFATNYLGHFLLANLLLDTMKKTALESNREGRIINVSSEFHRYPYPEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFDKIND SGY  F+AY QSKLAN+LHANEL RR KEDGV+ITANS+HPG IATN+ RH
Sbjct: 181 IRFDKINDQSGYKKFQAYGQSKLANVLHANELMRRFKEDGVNITANSLHPGVIATNLFRH 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           N+     N I   L   A + +LKNVQQ
Sbjct: 241 NTSLADDNPIRVFLES-AARLVLKNVQQ 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490491|ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed protein product [Vitis vinifera]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/268 (74%), Positives = 222/268 (82%), Gaps = 8/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF+RKG SGFS SSTAEEVT GIDG+GLTAIVTGA+SGIGTET RVLALRGVHVVMGV
Sbjct: 1   MWLFSRKGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++AAG++VKE IVKEIP+AKVD MELDLSS+ASVR FASE+N     LNILINNAG  G
Sbjct: 61  RNMAAGQEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNILINNAGTTG 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            P+MLSKDNIE+ FATNHLGHFLLT+LLLDTMKKT ++SG EGRI+ VSSEGHR  Y  G
Sbjct: 121 -PYMLSKDNIEMLFATNHLGHFLLTSLLLDTMKKTTQESGKEGRIVIVSSEGHRFTYRGG 179

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFD IND SGY+   AY QSKLAN+LHANELARR KEDGVDITANS+HPGAI TNI RH
Sbjct: 180 IRFDNINDKSGYSSPFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNIFRH 239

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           +S       IL  L    GK +LKNVQQ
Sbjct: 240 SS-------ILSGLVNTVGKYVLKNVQQ 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248796|ref|NP_001240197.1| uncharacterized protein LOC100783465 [Glycine max] gi|255644813|gb|ACU22908.1| unknown [Glycine max]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/269 (72%), Positives = 225/269 (83%), Gaps = 7/269 (2%)

Query: 2   KLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG 61
           K+W F+RKG SGFS+SSTAE+VT+GIDG+GLTAIVTGA+SGIGTET RVL+LRGVHV+MG
Sbjct: 36  KMWPFSRKGASGFSSSSTAEQVTEGIDGTGLTAIVTGASSGIGTETTRVLSLRGVHVIMG 95

Query: 62  VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           VR++ A KDVKET++KEIPSAKVDAMELDLSSL SV+ FASE+      LN+LINNAGIM
Sbjct: 96  VRNMLAAKDVKETLLKEIPSAKVDAMELDLSSLESVKKFASEFKSSGLPLNMLINNAGIM 155

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
             PF LSKD IELQFATNHLGHFLLTNLLLDTMKKT+R++  EGRI+NVSSE HR  Y E
Sbjct: 156 ACPFKLSKDKIELQFATNHLGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFTYSE 215

Query: 182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           GIRFDKIND S Y+ +RAY QSKLANILHANEL RRLKEDGVDI+ANS+HPG IATN+ R
Sbjct: 216 GIRFDKINDESSYSNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGVIATNLSR 275

Query: 242 HNSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           H S    +N +  A+     + +LKNVQQ
Sbjct: 276 HIS---PVNGLTKAI----ARLVLKNVQQ 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/268 (72%), Positives = 223/268 (83%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F R G SGFSASSTA EVT GIDG+GLTAIVTGA+SGIGTETARVLALRGVHVVM V
Sbjct: 1   MWWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++AAG++VKE I KEIP+AK+DAMELDLSS+ASVR FASE++     LN+LINNAG+M 
Sbjct: 61  RNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPFMLSKDNIELQFATNH+GHFLLTNLLL+TMKKTAR+S  EGRI+NVSS  HR +YHEG
Sbjct: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFD IND SGYN   AY QSKLAN+LHANEL+RRLK+DG +ITANS+HPGAIATN+ RH
Sbjct: 181 IRFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIATNLFRH 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
             L       +     I GK ++KNVQQ
Sbjct: 241 VPL-------VGGFIDIFGKYVVKNVQQ 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426446|ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform 1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed protein product [Vitis vinifera]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/268 (71%), Positives = 223/268 (83%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W+F RKGPSGFSA STAEEV  GIDG+GLTA+VTGA+SGIGTET+RVLAL GVHV+M V
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ AG++VKETI+KEIP+AKVD MELDLSSL SVR FASEY      LN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPF+LS DNIELQFATNHLGHFLLTNLLL+TMK TAR+SG EGRI+NVSSEGHR  Y EG
Sbjct: 121 TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           I FDKIND S YN   AY QSKLANILHANELA+RL+E+GV+ITANS+HPGAIATN++R+
Sbjct: 181 ICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNLLRY 240

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           +S        L  +  + GK +LKN+ Q
Sbjct: 241 HSF-------LDGIVNMVGKYVLKNIPQ 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545238|ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223547588|gb|EEF49083.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/268 (75%), Positives = 231/268 (86%), Gaps = 7/268 (2%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF++K PSGFS+SSTAE+VT GIDGSGLTAIVTGA+SGIGTET RVLA  GVHVVM V
Sbjct: 1   MWLFSKKSPSGFSSSSTAEQVTQGIDGSGLTAIVTGASSGIGTETTRVLASCGVHVVMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ +G++VKETI+KEIP+AKVDAMELDLSS+ASVR FAS++N     LNILINNAG+M 
Sbjct: 61  RNLVSGRNVKETIIKEIPTAKVDAMELDLSSMASVRKFASDFNSSGLPLNILINNAGVMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTA +S  EGRI+NVSSE HR +YHEG
Sbjct: 121 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSNREGRIVNVSSEAHRYSYHEG 180

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFDKIND SGY+ FRAY QSKLAN+LHANEL RRLKEDGV+ITANS+HPGAI TN    
Sbjct: 181 IRFDKINDRSGYSSFRAYGQSKLANVLHANELTRRLKEDGVNITANSLHPGAIVTN---- 236

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
             LFR MN I++ +  + GK +LKNVQQ
Sbjct: 237 --LFRHMN-IINGMVNVLGKLVLKNVQQ 261

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122326|ref|XP_002318807.1| predicted protein [Populus trichocarpa] gi|222859480|gb|EEE97027.1| predicted protein [Populus trichocarpa]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/268 (74%), Positives = 225/268 (83%), Gaps = 1/268 (0%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W FNR G SGFS+SSTAEEVT G+D SGLTAIVTGA+SGIGTETARVLALRGVHV+MGV
Sbjct: 41  MWFFNRNGSSGFSSSSTAEEVTRGVDASGLTAIVTGASSGIGTETARVLALRGVHVIMGV 100

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++A+G+DVK+ ++KEIP+AKVD MELDLSSLASVR FAS++N     LN+LINNAGIM 
Sbjct: 101 RNMASGRDVKDAMIKEIPTAKVDVMELDLSSLASVRKFASDFNSSGRPLNLLINNAGIMA 160

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR+S  EGRI+NVSSE HR  Y EG
Sbjct: 161 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARESDIEGRIVNVSSEFHRYPYPEG 220

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           IRFD IND SGY  F AY QSKLAN+LHANEL RR KEDGV+ITANS+HPG IATN+ RH
Sbjct: 221 IRFDNINDQSGYKRFLAYGQSKLANVLHANELTRRFKEDGVNITANSLHPGVIATNLFRH 280

Query: 243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
           N    + N I   L  +AG  +LKNVQQ
Sbjct: 281 NMSLANDNPIRVFLKSLAG-LVLKNVQQ 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.929	0.813	0.623	2.5e-81
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.925	0.823	0.619	6.8e-79
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.843	0.719	0.563	5.1e-67
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.907	0.797	0.503	3.3e-63
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.900	0.749	0.486	5.1e-51
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.843	0.716	0.429	2.3e-46
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.840	0.709	0.426	4.5e-43
ZFIN|ZDB-GENE-040718-9	320	rdh12 "retinol dehydrogenase 1	0.783	0.690	0.386	1.3e-34
UNIPROTKB|O53613	303	Rv0068 "PROBABLE OXIDOREDUCTAS	0.734	0.683	0.395	2.2e-34
FB|FBgn0033204	300	CG2065 [Drosophila melanogaste	0.748	0.703	0.393	4.6e-34

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 167/268 (62%), Positives = 196/268 (73%)

Query:     3 LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
             +W F  KG SGFS+ STAEEVT G+DG+GLTAIVTGA+SGIG ETARVL+LRGVHVVM V
Sbjct:     1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query:    63 RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
             R+  +G  VKE IVK++P AK+D MELDLSS+ SVR FASEY      LN+LINNAGIM 
Sbjct:    61 RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query:   123 TPFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
              PFMLSKDNIELQFA              DTMK T+R+S  EGRI+N+SSE HR +Y EG
Sbjct:   121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query:   183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             +RFDKIND S Y+  RAY QSKL N+LHANEL ++LKEDGV+ITANS+HPGAI TN+ R+
Sbjct:   181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query:   243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
                    N  L    G   K +LK+V Q
Sbjct:   241 ------FNPYLAVAVGAVAKYILKSVPQ 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
 Identities = 166/268 (61%), Positives = 200/268 (74%)

Query:     3 LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
             +W F  KG SGFSA STAEEVT GIDG+GLTAIVTGA+SGIG ET RVLALRGVHVVM V
Sbjct:     1 MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query:    63 RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
             R+  +G  V++ I+KEIP AK+D M+LDLSS+ASVR+FASEY      LN+LINNAGIM 
Sbjct:    61 RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query:   123 TPFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
              PF+LS DNIELQFA              + MKKTA +S  EGRI+ VSSEGHR AY EG
Sbjct:   121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query:   183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             ++FDKIND + YN  +AY QSKL NILHA ELAR  KE GV+ITANS+HPG+I TN++R+
Sbjct:   181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRY 240

Query:   243 NSLFRSMNTILHALPGIAGKCLLKNVQQ 270
             +S    +NTI +A+    GK +LK++ Q
Sbjct:   241 HSF---INTIGNAV----GKYVLKSIPQ 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 134/238 (56%), Positives = 173/238 (72%)

Query:     8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             R+GPSGF ++STAEEVT GID + LTAI+TG T GIG ETARVL+ RG HVV+G R++ A
Sbjct:    10 RRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGA 69

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
              ++ K  I+++  +A+V  ++LDLSS+ S++ F  E++  H  LN+LINNAG+M  P+ L
Sbjct:    70 AENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQL 129

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             S+D IELQFA              DTMK TA+ SG EGRI+NVSS  H   Y EGI+FD 
Sbjct:   130 SEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDS 189

Query:   188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
             IND   Y+  RAY QSKLANILHANEL+R+L+E+GV+ITANSVHPG I TN+ +H +L
Sbjct:   190 INDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQHTAL 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 132/262 (50%), Positives = 180/262 (68%)

Query:     8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             +KG SGF ++STAE+VT  ID S LTAI+TG TSGIG E ARVLA+RG HV++  R+  A
Sbjct:    10 KKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKA 69

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
               + KE I++  P+A+VD +++D+SS+ SVR+F  ++   +  LNILINNAG+M  PF L
Sbjct:    70 ANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKL 129

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             ++D IE QFA              D MK TAR+SG +GRI+N+SS  H   Y EGI+F  
Sbjct:   130 TEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQG 189

Query:   188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS--- 244
             INDP+GY+  RAY QSKL+N+LH+N L+RRL+E+GV+IT NSVHPG + TN+ R++    
Sbjct:   190 INDPAGYSERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLVTTNLFRYSGFSM 249

Query:   245 -LFRSMNTILHA-LP-GIAGKC 263
              +FR+M  +    +P G A  C
Sbjct:   250 KVFRAMTFLFWKNIPQGAATTC 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 129/265 (48%), Positives = 161/265 (60%)

Query:    10 GPSGFSASSTAEEVTDG--IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             GP+GF + STAE+VT       S LTAI+TG TSGIG ETARVLA RGV VVM VRD+  
Sbjct:    13 GPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKK 72

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
              + VKE I++E P A +   E+DLSSL+SV  F S++  Q   LNILINNAG+       
Sbjct:    73 AEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEF 132

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             S++ IEL FA              + M  TA KSG EGRIIN+SS  H     +   F K
Sbjct:   133 SEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPK 192

Query:   188 INDP-SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR-HNSL 245
             +  P S YNG RAY+QSKLA ILHA  L+++LK+   ++T N+VHPG + T IIR H  L
Sbjct:   193 LLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGIVKTGIIRAHKGL 252

Query:   246 FRSMNTILHALPGIAGKCLLKNVQQ 270
             F        +L  IA K LLK++ Q
Sbjct:   253 FTD------SLFLIASK-LLKSISQ 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 103/240 (42%), Positives = 149/240 (62%)

Query:     4 WLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR 63
             +L    G SGF + STAEEVT+  D   +TA++TGATSGIG ETARVLA RG  ++   R
Sbjct:     7 YLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGARLIFPAR 66

Query:    64 DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT 123
             ++ A ++ KE IV E P  ++  M+LDLSS+ASVRNF +++      LN+LINNAG +  
Sbjct:    67 NVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAH 126

Query:   124 PFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI 183
                +S+D IE+ FA              + M +TA ++G +GRI+NV+S  H     + I
Sbjct:   127 EHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGWFSGDLI 186

Query:   184 RFDK-INDPS-GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
              + + I+ P   ++  RAY+ SKLAN+LH  EL+ RL++ G ++T N VHPG + T + R
Sbjct:   187 EYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGVVRTRLTR 246

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 102/239 (42%), Positives = 139/239 (58%)

Query:     5 LFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD 64
             L    GPSGF + STA+ VT   D   LTAI+TGATSGIG ETARVLA RG  +V+  R 
Sbjct:     8 LIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARS 67

Query:    65 IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP 124
             +   ++ K  I+ E P A++  M LDLSSL SVR F  ++   +  LNILINNAG     
Sbjct:    68 VKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHK 127

Query:   125 FMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
               LS+D +E+ FA                M +TA ++G +GRI+NV+S  H     + ++
Sbjct:   128 HALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHSWFSGDMLQ 187

Query:   185 F--DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
             +  D   +   Y+  RAY+ SKLAN+LH  EL+R L +   ++TAN VHPG + T + R
Sbjct:   188 YLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGIVKTRLTR 246

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

ZFIN|ZDB-GENE-040718-9 rdh12 "retinol dehydrogenase 12 (all-trans and 9-cis)" [Danio rerio (taxid:7955)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 92/238 (38%), Positives = 128/238 (53%)

Query:     8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             RK  +G S  ST       +DG    A+VTGA SGIG ETA  LA RG  V++  RD+  
Sbjct:    27 RKYAAGGSCRSTVR-----LDGK--VALVTGANSGIGKETALDLASRGARVILACRDLEK 79

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
              ++    I   +  AKV+  ELDL+   S+R FA  +  +   L+ILINNAG+M  P+M 
Sbjct:    80 AEEAAAEIRTRVGGAKVEVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMMCPYMK 139

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             + D  E+Q                  +K++A       RI+ VSS  H   +   IRF  
Sbjct:   140 TADGFEMQIGVNHLGHYLLTYLLIGLLKRSA-----PSRIVVVSSLAHNFGW---IRFHD 191

Query:   188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
             ++    YN   AY QSKLAN+L   ELARRL+  G ++T NSVHPG + + ++RH++L
Sbjct:   192 LHSQGSYNSGLAYCQSKLANVLFTRELARRLQ--GSNVTVNSVHPGTVRSELVRHSTL 247

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|O53613 Rv0068 "PROBABLE OXIDOREDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 85/215 (39%), Positives = 117/215 (54%)

Query:    28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
             D +G TA++TGA +G+G ETA  LA  G HVV+ VR++  GK     I +  P A+V+  
Sbjct:    11 DQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQ 70

Query:    88 ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXX 147
             ELDL+SLASVR  A++    H ++++LINNAG+M TP   + D  E+QF           
Sbjct:    71 ELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALT 130

Query:   148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 D +   A    G  R++ +SS GHR+     I FD +     Y    AY Q+KLAN
Sbjct:   131 GLLIDRLLPVA----GS-RVVTISSVGHRI--RAAIHFDDLQWERRYRRVAAYGQAKLAN 183

Query:   208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             +L   EL RRL   G  I   S HPG   T ++R+
Sbjct:   184 LLFTYELQRRLAPGGTTIAVAS-HPGVSNTEVVRN 217

GO:0005886 "plasma membrane" evidence=IDA

FB|FBgn0033204 CG2065 [Drosophila melanogaster (taxid:7227)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 87/221 (39%), Positives = 124/221 (56%)

Query:    22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS 81
             + T   D +G   IVTGA +GIG ET   +A RG  V M  RD+   +  ++ I++E  +
Sbjct:     5 QFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNN 64

Query:    82 AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXX 141
               + + ELDLSSL S+R FA+ +  +  +L++LINNAG+M  P  L+KD  E+Q      
Sbjct:    65 QNIFSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHM 124

Query:   142 XXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
                       D +KKTA       RI+NVSS  H   +   I+   +N    Y+   AYS
Sbjct:   125 GHFLLTHLLLDVLKKTA-----PSRIVNVSSLVHTQGF---IKTADLNSEKSYSRIGAYS 176

Query:   202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             QSKLAN+L   ELA+RL  +G  +T NS+HPGA+ T + R+
Sbjct:   177 QSKLANVLFTRELAKRL--EGTGVTTNSLHPGAVDTELSRN 215

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.7063	0.9255	0.8259	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-91
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-77
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-76
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-73
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-54
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	4e-49
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	9e-44
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	1e-36
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-35
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	5e-34
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	9e-34
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-32
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-30
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-29
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	8e-25
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-23
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-22
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-22
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-22
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-22
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-22
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-22
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-21
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	8e-21
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-20
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-20
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	8e-20
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	8e-20
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-19
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-18
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-18
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-18
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-18
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-18
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-18
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-17
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	5e-17
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-17
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-17
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	1e-16
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-16
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-16
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-16
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	5e-16
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	8e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-15
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-15
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-15
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	5e-15
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-15
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	8e-15
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	9e-15
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-14
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	4e-14
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-14
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	7e-14
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-14
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	9e-14
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-13
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-13
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-13
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-13
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	3e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-13
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-13
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-13
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	9e-13
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-13
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-12
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-12
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-12
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-12
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-12
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-12
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	6e-12
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-12
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-12
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	8e-12
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-12
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	8e-12
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	8e-12
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-11
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-11
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-11
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-11
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	4e-11
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-11
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-11
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-11
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-11
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-11
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-10
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-10
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-10
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-10
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-10
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-10
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-10
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-10
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	6e-10
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	7e-10
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	7e-10
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-09
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-09
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-09
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-09
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-09
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-09
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	3e-09
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	4e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	5e-09
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	6e-09
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	7e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	8e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	8e-09
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	8e-09
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	9e-09
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-08
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-08
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-08
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-08
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-08
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-08
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-08
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	6e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-07
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-07
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-07
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-07
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-07
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-07
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	6e-07
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	6e-07
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-07
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-07
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	6e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	7e-07
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	9e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-06
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-06
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-06
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-06
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	5e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-06
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	9e-06
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-05
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-05
pfam08659	181	pfam08659, KR, KR domain	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-05
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	7e-05
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	7e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	9e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-04
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-04
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	4e-04
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-04
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	6e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-04
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.002
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	0.002
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	0.002
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.002
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	0.002
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.002
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	0.002
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	0.003
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.003
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.004
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  270 bits (692), Expect = 7e-91
 Identities = 108/223 (48%), Positives = 142/223 (63%), Gaps = 8/223 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   ++TGA SGIG ETAR LA RG HV++  R+   G++    I KE  +AKV+ ++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           LSSLASVR FA E+  +  +L+ILINNAGIM  P  L+KD  ELQFA N+LGHFLLTNLL
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  +K +A       RI+NVSS  HR           + +   Y+ ++AY QSKLANIL 
Sbjct: 121 LPVLKASA-----PSRIVNVSSIAHRAG-PIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 253
             ELARRL+  G  +T N++HPG + T ++R N  F  +  +L
Sbjct: 175 TRELARRLEGTG--VTVNALHPGVVRTELLRRNGSFFLLYKLL 215

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  236 bits (604), Expect = 3e-77
 Identities = 99/216 (45%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG  A+VTGA +G+G ETA  LA +G HVV+ VR++  GK     I    P A V   
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           ELDL+SLASVR  A      + ++++LINNAG+M TP   + D  ELQF TNHLGHF LT
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALT 132

Query: 148 NLLLDTMKKTARKSGGEG-RIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            LLLD +          G R++ VSS GHR+     I FD +     YN   AY QSKLA
Sbjct: 133 GLLLDRLLPV------PGSRVVTVSSGGHRI--RAAIHFDDLQWERRYNRVAAYGQSKLA 184

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           N+L   EL RRL   G    A + HPG   T + R+
Sbjct: 185 NLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN 220

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  235 bits (601), Expect = 1e-76
 Identities = 104/231 (45%), Positives = 130/231 (56%), Gaps = 16/231 (6%)

Query: 12  SGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV 71
           SGF A+STAEEV  G D SG TAIVTG  SG+G ET R LA  G HV++  R     ++ 
Sbjct: 7   SGFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA 66

Query: 72  KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN 131
               +  I   +V    LDL+ L SVR FA  +     +++ILINNAG+M  P     D 
Sbjct: 67  ----LAGIDGVEVV--MLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG 120

Query: 132 IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP 191
            E QFATNHLGHF L NLL       A  +G   R++ +SS GHR +    IR+D  +  
Sbjct: 121 WEAQFATNHLGHFALVNLLWP-----ALAAGAGARVVALSSAGHRRS---PIRWDDPHFT 172

Query: 192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            GY+ + AY QSK AN L A  L +  K+ GV   A SVHPG I T + RH
Sbjct: 173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGV--RAFSVHPGGILTPLQRH 221

Length = 315

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  224 bits (572), Expect = 7e-73
 Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 12/228 (5%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G T I+TGA +GIG ETAR LA RG  V+M  RD+A  ++    I ++  + +V    LD
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           L+SL S+R FA+E+  +  +L++LINNAG+M  P+  ++D  E+QF  NHLGHFLLTNLL
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDPSGYNGFRAYSQSKLANIL 209
           LD +KK+A       RI+NVSS    LA+  G I FD +N    YN   AY QSKLAN+L
Sbjct: 121 LDLLKKSA-----PSRIVNVSS----LAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVL 171

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 257
              ELARRL+  G  +T N++HPG + T + RH  +     + L    
Sbjct: 172 FTRELARRLQ--GTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPL 217

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  177 bits (451), Expect = 2e-54
 Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 29/236 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   I+TGA SGIG ETAR  AL G HV++  R+++        I++E   A+V+AM LD
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           L+SL SV+ FA  +  ++  L++L+ NA +   P+ L++D +E  F  NHLGHF L  LL
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-------------YNGF 197
            D ++++A       R+I VSSE H        RF  + D  G             Y   
Sbjct: 121 EDVLRRSAP-----ARVIVVSSESH--------RFTDLPDSCGNLDFSLLSPPKKKYWSM 167

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGA-IATNIIRHNSLFRSMNTI 252
            AY+++KL NIL +NEL RRL   G  IT+NS+HPG  + ++I R+  ++  + T+
Sbjct: 168 LAYNRAKLCNILFSNELHRRLSPRG--ITSNSLHPGNMMYSSIHRNWWVYTLLFTL 221

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  164 bits (417), Expect = 4e-49
 Identities = 90/213 (42%), Positives = 116/213 (54%), Gaps = 10/213 (4%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG  A+VTGA+ G+G   AR LA  G  V++ VR+ A G+     I   +P AK+   
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLL 146
            LDLSSLASV     +   +   +++LINNAG+M  P    + D  ELQF TNHLGHF L
Sbjct: 71  ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL 130

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T  LL  ++       G  R+ + SS     A    I +D +N    Y G RAYSQSK+A
Sbjct: 131 TAHLLPLLR------AGRARVTSQSSIA---ARRGAINWDDLNWERSYAGMRAYSQSKIA 181

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
             L A EL RR +  G  IT+N  HPG   TN+
Sbjct: 182 VGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214

Length = 313

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  150 bits (381), Expect = 9e-44
 Identities = 86/263 (32%), Positives = 118/263 (44%), Gaps = 37/263 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T ++TGA+SG+G   A+ LA RG  HVVM  RD    +   + +   +P      +  DL
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +SL SVR F   +      L+ L+ NA +          + D  EL    NHLGHFLLTN
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTN 120

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI------------------RFDKIND 190
           LLL+ ++   R      RI+ V S  H      G                    F+ + D
Sbjct: 121 LLLEDLQ---RSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMID 177

Query: 191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNSLFRS 248
              + G +AY  SK+ N+L   EL RRL E    IT NS++PG IA T + R H  LFR+
Sbjct: 178 GGEFEGAKAYKDSKVCNMLTTYELHRRLHE-ETGITFNSLYPGCIAETGLFREHYPLFRT 236

Query: 249 MNTILHALP-------GIAGKCL 264
           +                 AG+ L
Sbjct: 237 LFPPFQKYITKGYVSEEEAGERL 259

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  132 bits (334), Expect = 1e-36
 Identities = 84/244 (34%), Positives = 119/244 (48%), Gaps = 39/244 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELD 90
           T I+TGA+SG+G   A+ LA RG HV+M  R++       E   +E  IP      + +D
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA----EAAAQELGIPPDSYTIIHID 63

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLL 146
           L  L SVR F  ++      L+ L+ NA +    +  P + S    EL  ATNHLGHFLL
Sbjct: 64  LGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLGHFLL 122

Query: 147 TNLLLDTMKKTARKSGGEGRII---NVSSEGHRLAYHEGI--RFDKINDPSGY-NGFR-- 198
            NLLL+ +KK+      + R++    V++    L     I    D + D SG+  GF+  
Sbjct: 123 CNLLLEDLKKSPAP---DPRLVILGTVTANPKELGGKIPIPAPAD-LGDLSGFEAGFKAP 178

Query: 199 -------------AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HN 243
                        AY  SKL N+L   EL RR  E    IT +S++PG +A T + R   
Sbjct: 179 ISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES-TGITFSSLYPGCVADTPLFRNTP 237

Query: 244 SLFR 247
            LF+
Sbjct: 238 PLFQ 241

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  127 bits (320), Expect = 2e-35
 Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 27/226 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+SGIG   AR LA  G  VV+  R+    + + E    E       A++ D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRN---EEALAELAAIEALGGNAVAVQADVSD 57

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 151
              V     E   +  +L+IL+NNAGI     +  L+ ++ +     N  G FLLT   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             MKK      G GRI+N+SS                          AY+ SK A     
Sbjct: 118 PHMKK-----QGGGRIVNISSVAGLRPLPGQA---------------AYAASKAALEGLT 157

Query: 212 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 257
             LA  L   G  I  N+V PG + T ++       +   +  A+P
Sbjct: 158 RSLALELAPYG--IRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIP 201

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  125 bits (315), Expect = 5e-34
 Identities = 86/240 (35%), Positives = 118/240 (49%), Gaps = 34/240 (14%)

Query: 35  IVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           I+TGA+SG+G  TA+ LA  G  HVVM  RD    +   ++    +P      M LDL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLAS 58

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL 149
           L SVR F   +      L++L+ NA +       P   + D  EL   TNHLGHFLL+ L
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEP-TFTADGFELSVGTNHLGHFLLSRL 117

Query: 150 LLDTMKKTARKSGGEGRIINVSS--------EGH-----RLAYHEGIR--FDKIN----- 189
           LLD +KK+   S    R+I V S         G+      L    G+    + +N     
Sbjct: 118 LLDDLKKSDYPS---KRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMI 174

Query: 190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNSLFR 247
           D   ++G +AY  SK+ N+L   E  RR  E+   IT  S++PG IA T + R H  LFR
Sbjct: 175 DGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEE-TGITFASLYPGCIATTGLFREHIPLFR 233

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  124 bits (313), Expect = 9e-34
 Identities = 86/245 (35%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMEL 89
           T I+TGA+SG+G   A+ LA  G  HV+M  RD        E   K +  P      M L
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDF----LKAEQAAKSLGMPKDSYTIMHL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFL 145
           DL SL SVR F  ++      L+ L+ NA +       P   + D  EL   TNHLGHFL
Sbjct: 61  DLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEP-RFTADGFELSVGTNHLGHFL 119

Query: 146 LTNLLLDTMKKTARKSGGEGRII---NVSSEGHRLAYHEGIRFDKINDPSG--------- 193
           L NLLLD +K +  K     R+I   +++   + LA +   + + + D SG         
Sbjct: 120 LCNLLLDDLKNSPNKD---KRLIIVGSITGNTNTLAGNVPPKAN-LGDLSGLAAGFKAPI 175

Query: 194 -------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR-HNS 244
                  + G +AY  SK+ N+L   EL RR   D   IT  S++PG IA T + R H  
Sbjct: 176 AMIDGKEFKGAKAYKDSKVCNMLTVRELHRRF-HDETGITFASLYPGCIADTGLFREHVP 234

Query: 245 LFRSM 249
           LFR++
Sbjct: 235 LFRTL 239

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  119 bits (299), Expect = 2e-32
 Identities = 72/221 (32%), Positives = 98/221 (44%), Gaps = 30/221 (13%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVD 85
           +D SG  A+VTGA+SGIG   AR LA  G  VV+   R      +     +KE    +  
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60

Query: 86  AMELDLSS-LASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHL 141
           A+  D+S    SV    +    +  +++IL+NNAGI G   P   L++++ +     N L
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           G FLLT   L  MKK         RI+N+SS               +    G  G  AY+
Sbjct: 121 GAFLLTRAALPLMKK--------QRIVNISS---------------VAGLGGPPGQAAYA 157

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            SK A I     LA  L   G  I  N+V PG I T +   
Sbjct: 158 ASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAA 196

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  112 bits (283), Expect = 7e-30
 Identities = 61/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTGA+ GIG   A  LA  G  VV+   +  A + +   +       +   +  
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVF 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S  A+VR            L+IL+NNAGI        +S+++ +     N  G F + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M K        GRI+N+SS               ++  +G  G   YS +K   
Sbjct: 122 RAALPPMIKA-----RYGRIVNISS---------------VSGVTGNPGQTNYSAAKAGV 161

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           I     LA  L   G  IT N+V PG I T++  
Sbjct: 162 IGFTKALALELASRG--ITVNAVAPGFIDTDMTE 193

Length = 246

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  111 bits (280), Expect = 1e-29
 Identities = 65/210 (30%), Positives = 90/210 (42%), Gaps = 34/210 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTGA  GIG E  R LA  G   V++  RD+  G+   E +  E     V   +LD+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTN 148
           +  AS+   A     ++  L+IL+NNAGI          +++       TN  G   +T 
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 149 LLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            LL  +KK+       GRI+NVSS  G   +                    AY  SK A 
Sbjct: 120 ALLPLLKKSP-----AGRIVNVSSGLGSLTS--------------------AYGVSKAAL 154

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
                 LA+ LKE G  I  N+  PG + T
Sbjct: 155 NALTRILAKELKETG--IKVNACCPGWVKT 182

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 99.2 bits (248), Expect = 8e-25
 Identities = 64/210 (30%), Positives = 88/210 (41%), Gaps = 25/210 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG   A  LA  G  V++            E +      A+  A ++
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKAR--ARQV 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+   A+++   +       +L+IL+ NAGI   TPF  +  +  E     N  G FLLT
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLT 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  + +      G GRI+  SS    +A   G R        GY G   Y+ SK   
Sbjct: 123 QAALPALIR-----AGGGRIVLTSS----VA---GPRV-------GYPGLAHYAASKAGL 163

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +     LA  L      IT NSVHPG + T
Sbjct: 164 VGFTRALALELAARN--ITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 98.1 bits (244), Expect = 3e-24
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 13/212 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G + ++TGA SGIG   A  +A RG  V M  R+    ++ ++ I  E  +  +    +D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +S    V  F  E+  +  +L++LINNAG M     L++D +E  FATN LG ++LT  L
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG-YNGFRAYSQSKLANIL 209
           +  ++K       + R+I VSS G      + +  + +      ++G   Y+Q+K   ++
Sbjct: 121 IPVLEKEE-----DPRVITVSSGG---MLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVI 172

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIR 241
              + A++  E    I  + +HPG   T  +R
Sbjct: 173 MTEQWAKKHPE----IHFSVMHPGWADTPAVR 200

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 95.0 bits (237), Expect = 5e-23
 Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 25/209 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA++TGA+SGIG E A+ LA RG ++++  R     + + + +  +    +V+ +  DLS
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLS 66

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++     E   +   +++L+NNAG    G    LS D  E     N L    LT  +
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV 126

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  M +      G G IIN+ S                  P+ Y     YS +K   +  
Sbjct: 127 LPGMVE-----RGAGHIINIGSAA---GLI----------PTPYMA--VYSATKAFVLSF 166

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNI 239
           +  L   LK  GV +TA  V PG   T  
Sbjct: 167 SEALREELKGTGVKVTA--VCPGPTRTEF 193

Length = 265

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.4 bits (233), Expect = 1e-22
 Identities = 68/220 (30%), Positives = 95/220 (43%), Gaps = 37/220 (16%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDA 86
              G  AIVTGA+ GIG   A +LA  G  VV+    +  A +++    ++EI     DA
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL----LEEIKEEGGDA 57

Query: 87  M--ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLG 142
           +  + D+SS   V N   +   +  +++IL+NNAGI        ++ +  +     N  G
Sbjct: 58  IAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA--- 199
             LLT   L  M K  RKSG    I+N+SS                    G  G      
Sbjct: 118 VMLLTRYALPYMIK--RKSGV---IVNISSIW------------------GLIGASCEVL 154

Query: 200 YSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI 239
           YS SK A       LA+ L   G  I  N+V PGAI T +
Sbjct: 155 YSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEM 192

Length = 247

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 93.1 bits (232), Expect = 1e-22
 Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 32/211 (15%)

Query: 34  AIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            ++TGA+ GIG E  R L  RG   V+   RD +A  ++          +++  +ELD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 93  SL--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS---KDNIELQFATNHLGHFLLT 147
                S    A         L++LINNAGI+ +    S    +++   F  N LG  LLT
Sbjct: 58  DEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA- 206
              L  + K     G   +IIN+SS           R   I D +   G+ +Y  SK A 
Sbjct: 116 QAFLPLLLK-----GARAKIINISS-----------RVGSIGD-NTSGGWYSYRASKAAL 158

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
           N+L  + LA  LK DG  IT  S+HPG + T
Sbjct: 159 NMLTKS-LAVELKRDG--ITVVSLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 33/215 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TG +SGIG   A  LA +G  V+   R+      ++        + +V  +ELD++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNP---DKLESLGELLNDNLEV--LELDVT 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLL 150
              S++    E   +  ++++L+NNAG     P    S + +   F  N  G   +T   
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  M    RK G  GRI+NVSS    +             P+ + G   Y  SK A  L 
Sbjct: 117 LPLM----RKQGS-GRIVNVSSVAGLV-------------PTPFLG--PYCASKAA--LE 154

Query: 211 A--NELARRLKEDGVDITANSVHPGAIATNIIRHN 243
           A    L   L   G+ +T   + PG + T    + 
Sbjct: 155 ALSESLRLELAPFGIKVT--IIEPGPVRTGFADNA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 92.3 bits (230), Expect = 3e-22
 Identities = 66/209 (31%), Positives = 91/209 (43%), Gaps = 29/209 (13%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           I+TGA+SGIG E A  LA  G  +V+  R     ++VK     E+ +     + LD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSDL 65

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNLLL 151
                   E       L+ILINNAG +    +    +I++       N+ G   LT   L
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAG-ISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAAL 124

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANILH 210
             + +  R     G I+ VSS    +A   G    KI  P     FR AY+ SK A    
Sbjct: 125 PHLIE--RSQ---GSIVVVSS----IA---G----KIGVP-----FRTAYAASKHALQGF 163

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNI 239
            + L   L E  + +T   V PG I TNI
Sbjct: 164 FDSLRAELSEPNISVT--VVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 91.9 bits (229), Expect = 4e-22
 Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 36/219 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA+SGIG  TAR LA  G  VV+  R     ++  E +  EI +    A+ L
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALAL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++  A+V         +  +++IL+NNAG+  G P      D+ +    TN  G    T
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGT 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG----FRAYSQS 203
             +L  M    RKS   G IIN+ S   R  Y  G         + Y       RA+S  
Sbjct: 121 RAVLPGMV--ERKS---GHIINLGSIAGRYPYPGG---------AVYGATKAAVRAFSLG 166

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                     L + L   G+ +T   + PG + T     
Sbjct: 167 ----------LRQELAGTGIRVT--VISPGLVETTEFST 193

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.1 bits (227), Expect = 9e-22
 Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 27/215 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTGA  G+G   A  LA  G  VV+  R D  A +++ E +       +  A++
Sbjct: 5   MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQ 62

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D++  A++    +    +  +++IL+NNAGI    P   +S D  +     N  G F L
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHL 122

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              ++  M+K        GRI+N+SS         G+         G+ G   Y+ +K  
Sbjct: 123 LRAVVPPMRKQ-----RGGRIVNISSVA-------GLP--------GWPGRSNYAAAKAG 162

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +     LAR L E G  IT N V PG I T++  
Sbjct: 163 LVGLTKALARELAEYG--ITVNMVAPGDIDTDMKE 195

Length = 249

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.7 bits (221), Expect = 7e-21
 Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 28/211 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIVTGA+SGIG   AR  A  G  VV+  R+  A + V   I+      +  A+  
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAA 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLL 146
           D+S  A V    +    +   ++IL+NNAG      P + + +   +  FA N    +L 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T   +  M    R  GG G I+NV+S         G+R      P    G   Y+ SK A
Sbjct: 121 TQAAVPAM----RGEGG-GAIVNVASTA-------GLR------PRP--GLGWYNASKGA 160

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
            I     LA  L  D   I  N+V P  + T
Sbjct: 161 VITLTKALAAELGPDK--IRVNAVAPVVVET 189

Length = 251

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 88.7 bits (220), Expect = 8e-21
 Identities = 67/204 (32%), Positives = 93/204 (45%), Gaps = 26/204 (12%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TG++ G+G   AR L  +G  VV+  R      D K       P A    +  DLSSLA
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK----AACPGAAG-VLIGDLSSLA 66

Query: 96  SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD-NIELQFATNHLGHFLLTNLLLDTM 154
             R  A + N      + +I+NAGI+  P   + D  I    A N L  ++LT L+    
Sbjct: 67  ETRKLADQVNAIGR-FDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI--RR 123

Query: 155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN-DPSGYNGFRAYSQSKLANILHANE 213
            K         R+I +SS  HR         D I+    G N   AYS SKL  +  A  
Sbjct: 124 PK---------RLIYLSSGMHRGG---NASLDDIDWFNRGENDSPAYSDSKLHVLTLAAA 171

Query: 214 LARRLKEDGVDITANSVHPGAIAT 237
           +ARR K    D+++N+VHPG + T
Sbjct: 172 VARRWK----DVSSNAVHPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 69/219 (31%), Positives = 95/219 (43%), Gaps = 41/219 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA+ GIG   A  LA +G +VV+      AG    E +V EI +   K  A+
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAV 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFL 145
           + D+S   SV     E   +   ++IL+NNAGI      M + +++ +    TN  G F 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           LT  +   M K        GRIIN+SS               +    G  G   Y+ SK 
Sbjct: 121 LTKAVARPMMK-----QRSGRIINISS---------------VVGLMGNPGQANYAASKA 160

Query: 206 ANILH------ANELARRLKEDGVDITANSVHPGAIATN 238
              +       A ELA R       IT N+V PG I T+
Sbjct: 161 G--VIGFTKSLARELASR------GITVNAVAPGFIETD 191

Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 85.9 bits (213), Expect = 5e-20
 Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 32/209 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG E AR LA  G  V +G+R+     D+            V+A+  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPE---DLAALSASG---GDVEAVPYDAR 55

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
                R        +  ++++L++NAGI   T     S   +E  F+ N +    LT  L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           L  +++        GR++ ++S  G R                   G   YS SK A   
Sbjct: 116 LPALREAGS-----GRVVFLNSLSGKR----------------VLAGNAGYSASKFALRA 154

Query: 210 HANELARRLKEDGVDITANSVHPGAIATN 238
            A+ L +   + GV ++A  V PG + T 
Sbjct: 155 LAHALRQEGWDHGVRVSA--VCPGFVDTP 181

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 8e-20
 Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SG G  T   LA +G  V+  +R+    +++     +      +   +LD++
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLL 150
              S+ NF      +  ++++L+NNAG     F+  +  +    QF TN  G   +T  +
Sbjct: 65  DQNSIHNFQLVLK-EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  M+K        G+IIN+SS               I+   G+ G   Y  SK A    
Sbjct: 124 LPYMRKQ-----KSGKIINISS---------------ISGRVGFPGLSPYVSSKYALEGF 163

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNI 239
           +  L   LK  G+D+    + PG+  TNI
Sbjct: 164 SESLRLELKPFGIDVAL--IEPGSYNTNI 190

Length = 280

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 24/212 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AI+TG  SGIG  TA++L  +G  V   + D          +    P  K   ++ D++S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVA--ILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS----KDNIELQFATNHLGHFLLTNL 149
              +     +   +  +++ILINNAGI+     L         E     N  G    T L
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L  M K     G  G I+N+ S       +   +F              YS SK   + 
Sbjct: 121 ALHYMDKNKGGKG--GVIVNIGSVA---GLYPAPQFP------------VYSASKHGVVG 163

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIR 241
               LA  L+     +  N++ PG   T ++ 
Sbjct: 164 FTRSLADLLEYK-TGVRVNAICPGFTNTPLLP 194

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 34/215 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   A  LA  G  V +  R   A  +  E I          A+E D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLL 150
              +V     +   +   ++IL+NNAGI     ++  S+++ +     N  G F +T  +
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAV 119

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI-L 209
           +  M K  R+S   GRIIN+SS               +    G  G   Y+ SK   I  
Sbjct: 120 IRAMIK--RRS---GRIINISS---------------VVGLIGNPGQANYAASKAGVIGF 159

Query: 210 H---ANELARRLKEDGVDITANSVHPGAIATNIIR 241
               A ELA R       IT N+V PG I T++  
Sbjct: 160 TKSLAKELASR------GITVNAVAPGFIDTDMTD 188

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 31/212 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-- 87
           +G  A+VTGA+ GIG   A+ LA  G  VV+   + A+ K   E +V EI +A   A+  
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL--QFATNHLGHFL 145
           + D+S  + V             ++IL+NNAG+M    +      E    F  N  G F 
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                   +++ A++    GRIIN+SS                        + AY+ SK 
Sbjct: 119 -------VLQEAAKRLRDGGRIINISSSLTAA---------------YTPNYGAYAGSKA 156

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
           A       LA+ L   G  IT N+V PG + T
Sbjct: 157 AVEAFTRVLAKELG--GRGITVNAVAPGPVDT 186

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G T ++TG TSGIG   AR     G  V++  R     ++      KE+P+     + L
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKELPNIH--TIVL 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-----DNIELQFATNHLGHF 144
           D+    SV   A     ++  L+ILINNAGI   P  L       D  + +  TN +G  
Sbjct: 58  DVGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            L    L  +KK       E  I+NVSS
Sbjct: 117 RLIKAFLPHLKKQ-----PEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 81.3 bits (201), Expect = 3e-18
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 30/214 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--E 88
           G  A+VTGA+SGIG   A  LA  G +VV+  R   + +D  E +V+EI +    A+  +
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYR---SKEDAAEEVVEEIKAVGGKAIAVQ 59

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFL 145
            D+S    V         +   L+IL+NNAG+ G       ++ ++       N  G FL
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQG-DASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                +   +K+  K    G+IIN+SS       HE I       P  + G   Y+ SK 
Sbjct: 119 CAREAIKRFRKSKIK----GKIINMSS------VHEKI-------P--WPGHVNYAASKG 159

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNI 239
              +    LA+     G  I  N++ PGAI T I
Sbjct: 160 GVKMMTKTLAQEYAPKG--IRVNAIAPGAINTPI 191

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 64/215 (29%), Positives = 90/215 (41%), Gaps = 41/215 (19%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTGA+ GIG   A  LA  G  V++         ++V E +  +    K   +  D+S
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL--KAYGVKALGVVCDVS 58

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 143
               V+    E   +   ++IL+NNAGI       ++DN+     E  +     TN  G 
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAGI-------TRDNLLMRMKEEDWDAVIDTNLTGV 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           F LT  +L  M K  R     GRIIN+SS               +    G  G   Y+ S
Sbjct: 112 FNLTQAVLRIMIK-QRS----GRIINISS---------------VVGLMGNAGQANYAAS 151

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATN 238
           K   I     LA+ L      IT N+V PG I T+
Sbjct: 152 KAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 79.1 bits (196), Expect = 4e-18
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 16/145 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMEL 89
           T ++TG T G+G   AR LA  G  H+V+  R   A       +V E+ +  A+V     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGA--AELVAELEALGAEVTVAAC 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++   ++    +        L+ +++NAG+   G    L+ +  E   A    G + L 
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L  D            G  +  SS
Sbjct: 120 ELTRDL---------DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 81.3 bits (201), Expect = 4e-18
 Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 26/215 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAME 88
           SG  AI+TG++SGIG  TA + A  G  + +  RD    ++ +++ ++  +   K+  + 
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLL 146
            DL+         S    +  +L+IL+NNAG    G       +  +     N      L
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T L +  + KT      +G I+NVSS               +     + G   Y  SK A
Sbjct: 122 TKLAVPHLIKT------KGEIVNVSS---------------VAGGRSFPGVLYYCISKAA 160

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                   A  L   GV +  NSV PG I T   R
Sbjct: 161 LDQFTRCTALELAPKGVRV--NSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 5e-18
 Identities = 61/210 (29%), Positives = 86/210 (40%), Gaps = 26/210 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  G+G   A  LA  G  V       A  +++   +  E    +  A+  
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAA 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           DL+  ASV+ F          L+ L+NNAGI  +     L  D  +     N  G FL+ 
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLML 123

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  ++ + R     GRI+N++S+                   G     AY  SK A 
Sbjct: 124 RAALPHLRDSGR-----GRIVNLASDTALW---------------GAPKLGAYVASKGAV 163

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           I     LAR L   G  IT N++ PG  AT
Sbjct: 164 IGMTRSLARELGGRG--ITVNAIAPGLTAT 191

Length = 250

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 3e-17
 Identities = 61/211 (28%), Positives = 81/211 (38%), Gaps = 28/211 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            GL  +VTG  SGIG   A   A  G  V +     AA           +P AKV A   
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLL 146
           D++  A V         +   L++L+NNAGI G       ++ +  E   A N  G F  
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
               +  +K  A   GG   II +SS   RL               GY G   Y+ SK A
Sbjct: 126 ARAAVPLLK--ASGHGGV--IIALSSVAGRL---------------GYPGRTPYAASKWA 166

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
            +     LA  L   G  I  N++ PG +  
Sbjct: 167 VVGLVKSLAIELGPLG--IRVNAILPGIVRG 195

Length = 264

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 59/209 (28%), Positives = 84/209 (40%), Gaps = 26/209 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VT A+SGIG   AR LA  G  V +  R+    +     +      A V A+  D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTN 148
           L+    +     +      +++IL+NNAG    G    L+ ++    F    L    +  
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            +L  MK+      G GRI+N+SS             +     S  N  RA        I
Sbjct: 119 AVLPGMKER-----GWGRIVNISSLT-------VKEPEPNLVLS--NVARA------GLI 158

Query: 209 LHANELARRLKEDGVDITANSVHPGAIAT 237
                L+R L  DG  +T NSV PG I T
Sbjct: 159 GLVKTLSRELAPDG--VTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 78.1 bits (193), Expect = 5e-17
 Identities = 58/214 (27%), Positives = 78/214 (36%), Gaps = 27/214 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDL 91
             ++TG  SGIG   A   A RG  VV  + DI      +ET         KV   + D+
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVV--ILDINEKG-AEETANNVRKAGGKVHYYKCDV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S    V   A +   +   + ILINNAG++ G   + L  + IE  F  N L HF  T  
Sbjct: 58  SKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L  M +        G I+ ++S                       G   Y  SK A + 
Sbjct: 118 FLPDMLERNH-----GHIVTIASV---AGL------------ISPAGLADYCASKAAAVG 157

Query: 210 HANELARRLKEDGVD-ITANSVHPGAIATNIIRH 242
               L   LK  G   I    V P  I T + + 
Sbjct: 158 FHESLRLELKAYGKPGIKTTLVCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 33/213 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A++TGA++GIG  +A  LA  G +V+    DIA    V ET V +I S   K  A  +D
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAV--DIAEA--VSET-VDKIKSNGGKAKAYHVD 62

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLT 147
           +S    V++FASE   Q  ++++L NNAG+      + +  +++     A +  G FL+T
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            +LL  M +        G IIN SS   + A       D     SGYN       +K A 
Sbjct: 123 KMLLPLMMEQG------GSIINTSSFSGQAA-------DL--YRSGYNA------AKGAV 161

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNII 240
           I     +A     DG  I AN++ PG I T ++
Sbjct: 162 INFTKSIAIEYGRDG--IRANAIAPGTIETPLV 192

Length = 272

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 77.5 bits (191), Expect = 7e-17
 Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AI+TG  SGIG  TAR+ A  G  VV  + DI    D  + +  E+    +  +  D
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVV--IADID--DDAGQAVAAELGDPDISFVHCD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FML--SKDNIELQFATNHLGHFLL 146
           ++  A VR        +  +L+I+ NNAG++G P   +L  S +  E     N  G FL 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL- 118

Query: 147 TNLLLDTMKKTARKSGGEGR--IINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
                   K  AR      +  I++V+S         G+         G  G  AY+ SK
Sbjct: 119 ------GTKHAARVMIPAKKGSIVSVASVA-------GVV--------GGLGPHAYTASK 157

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 248
            A +      A  L E G+ +  N V P  +AT ++        
Sbjct: 158 HAVLGLTRSAATELGEHGIRV--NCVSPYGVATPLLTAGFGVED 199

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 77.4 bits (191), Expect = 1e-16
 Identities = 65/249 (26%), Positives = 99/249 (39%), Gaps = 54/249 (21%)

Query: 34  AIVTGATSGIGTETA-RVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DA 86
            +VTGA SG+G     R+LA       + +++  R++   +     ++   P A+V  D 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF--------------------- 125
           + +DLS++ SV   A E   ++ +L+ L  NAGIM  P                      
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 126 --------MLSK------DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS 171
                   +LS+      D +   F TN  GH+ L   L   +     +S G  +II  S
Sbjct: 124 TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLL----CRSDGGSQIIWTS 179

Query: 172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH 231
           S      Y     F  + D     G   YS SK    L +  L R+  + GV   +  VH
Sbjct: 180 SLNASPKY-----FS-LEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVY--SYVVH 231

Query: 232 PGAIATNII 240
           PG   TN+ 
Sbjct: 232 PGICTTNLT 240

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 17/142 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+SGIG  TA  LA  G  V    R+ A             P   V+ +ELD++
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVT 55

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             ASV+    E   +  ++++L+NNAG+   G     S    +  F TN  G   +T  +
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAV 115

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  M+       G GRIIN+SS
Sbjct: 116 LPHMRAQ-----GSGRIINISS 132

Length = 270

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 75.7 bits (186), Expect = 4e-16
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 26/212 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG + GIG  TA +LA  G  V V   +++ A ++V   I +     K   ++ D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADI 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTN 148
           S    V    +  +     L  L+NNAGI+ T      L+ + I    +TN  G+FL   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 149 LLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              + +K+ A K GG  G I+NVSS   RL             P  Y     Y+ SK A 
Sbjct: 121 ---EAVKRMALKHGGSGGAIVNVSSAASRLG-----------APGEYVD---YAASKGAI 163

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI 239
                 L+  +   G  I  N V PG I T +
Sbjct: 164 DTLTTGLSLEVAAQG--IRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 4e-16
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 26/222 (11%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I+  G  A+VTGA+SG+G   A+VLA  G  VV+  R +   K+++  I  E  +A V  
Sbjct: 5   INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV-- 62

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHF 144
           + LD++   S++   +    +   ++IL+NN+G+  T  ++  +  + +  F TN  G F
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122

Query: 145 LLTNLLLDTMKKTARKSGG---EGRIINVSSEGHRLAYHEGIR-FDKINDPSGYNGFRAY 200
            +   +   M   A+ +G     GRIIN++S         G+R   +I           Y
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASVA-------GLRVLPQIG---------LY 166

Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             SK A +     +A      G  I  N++ PG I T I  H
Sbjct: 167 CMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHH 206

Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 75.2 bits (185), Expect = 5e-16
 Identities = 61/215 (28%), Positives = 84/215 (39%), Gaps = 41/215 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTGA  GIG+  AR L   G  V+          KD  E         +V   ELD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA---------TNHLG 142
           +         +E   +   ++IL+NNAGI       ++D++  + +         TN   
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI-------TRDSVFKRMSHQEWNDVINTNLNS 114

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            F +T  L   M +      G GRIIN+SS               +N   G  G   YS 
Sbjct: 115 VFNVTQPLFAAMCEQ-----GYGRIINISS---------------VNGLKGQFGQTNYSA 154

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           +K   I     LA      G  IT N + PG IAT
Sbjct: 155 AKAGMIGFTKALASEGARYG--ITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 74.7 bits (184), Expect = 8e-16
 Identities = 60/210 (28%), Positives = 82/210 (39%), Gaps = 27/210 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIVTG   G+G   AR+L   G  VV+       G+        E+         L
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQ----AAAAEL-GDAARFFHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLT 147
           D++                 +L++L+NNAGI+    + +    E +     N  G FL T
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGT 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  MK+      G G IIN+SS        EG+    + DP       AY+ SK A 
Sbjct: 119 RAVIPPMKEA-----GGGSIINMSSI-------EGL----VGDP----ALAAYNASKGAV 158

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
                  A      G  I  NSVHPG I T
Sbjct: 159 RGLTKSAALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 55/216 (25%), Positives = 81/216 (37%), Gaps = 30/216 (13%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            D  G    +TG   GIG  TAR LA  G  V +G  D A  K+       E+    V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKET----AAELG--LVVG 54

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--IELQFATNHLGHF 144
             LD++  AS   F          +++L+NNAG+M     L + +         N  G  
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L + L    M    R   G G ++NV+S   ++                  G   Y  SK
Sbjct: 115 LGSKLAAPRM--VPR---GRGHVVNVASLAGKIP---------------VPGMATYCASK 154

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNII 240
            A +   +     L+  GV ++   V P  + T +I
Sbjct: 155 HAVVGFTDAARLELRGTGVHVSV--VLPSFVNTELI 188

Length = 273

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 67/208 (32%), Positives = 89/208 (42%), Gaps = 33/208 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           + ++TG +SGIG E A  L  RG  V+   R        K   V  + S     + LDL 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--------KPDDVARMNSLGFTGILLDLD 55

Query: 93  SLASVRNFASEY-NIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
              SV   A E   +  ++L  L NNAG  + G    +S+  +E QF+TN  G   LT L
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           LL  M        GEGRI+  SS               I+ P    G  AY+ SK A  L
Sbjct: 116 LLPAM-----LPHGEGRIVMTSSV-----------MGLISTP----GRGAYAASKYA--L 153

Query: 210 HANELARRLKEDGVDITANSVHPGAIAT 237
            A   A R++     I  + + PG I T
Sbjct: 154 EAWSDALRMELRHSGIKVSLIEPGPIRT 181

Length = 256

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 3e-15
 Identities = 52/213 (24%), Positives = 76/213 (35%), Gaps = 28/213 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G    +TG   G+G  TA  LA RG  V +    I  G       +  +P+  +    +D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVAL----IGRGAAPLSQTLPGVPADALRIGGID 62

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           L    + R    E N Q  +L+ L+N AG    GT      D  +  +  N       + 
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
             L  +  +     G GRI+N+ +                       G  AY+ +K    
Sbjct: 123 AALPALTAS-----GGGRIVNIGA---------------GAALKAGPGMGAYAAAKAGVA 162

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                LA  L + G  IT N+V P  I T   R
Sbjct: 163 RLTEALAAELLDRG--ITVNAVLPSIIDTPPNR 193

Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 74.5 bits (183), Expect = 5e-15
 Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +   A VTG   GIG ETAR LA  G HVV+   ++ A + V   I  +  + +  A+++
Sbjct: 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKM 472

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--LQFATNHLGHFLLT 147
           D++   +V+   ++  + +  ++I++NNAGI  +         E  L       G+FL+ 
Sbjct: 473 DVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVA 532

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 M    R+ G  G I+ ++S+    A                    AYS +K A 
Sbjct: 533 REAFRQM----REQGLGGNIVFIASKNAVYAGKNAS---------------AYSAAKAAE 573

Query: 208 ILHANELARRLKEDGVDITANSVHPGAI 235
              A  LA      G+ +  N+V+P A+
Sbjct: 574 AHLARCLAAEGGTYGIRV--NTVNPDAV 599

Length = 676

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 33/213 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELD 90
             I+TGA+ GIG   A  L  RG   VV+ + R       ++E   +  P  +V  ++ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEE---PLQELKEELRPGLRVTTVKAD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLL 146
           LS  A V            + ++LINNAG +G P      +  D ++  F  N      L
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T+ LL    +  +K G +  ++NVSS     A    +          + G+  Y  SK A
Sbjct: 117 TSTLL----RAFKKRGLKKTVVNVSS----GA---AVN--------PFKGWGLYCSSKAA 157

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
                +   R L  +  D+   S  PG + T++
Sbjct: 158 ----RDMFFRVLAAEEPDVRVLSYAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 71.9 bits (177), Expect = 8e-15
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 9/150 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA+SGIG  TAR  A  G  +++  R     +++ + +  + P  KV  ++LD+S
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP-VKVLPLQLDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI-MGTP--FMLSKDNIELQFATNHLGHFLLTNL 149
              S+         +   ++IL+NNAG+ +G         ++ E    TN  G   +T L
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           +L  M         +G IIN+ S   R  Y
Sbjct: 121 ILPIMIAR-----NQGHIINLGSIAGRYPY 145

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 72.0 bits (177), Expect = 9e-15
 Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 42/216 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELD 90
            AIVT + SGIG   A +LA +G  +  G+   +  +  KET  +E+ S   + +  +LD
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDI--GITWHSDEEGAKET-AEEVRSHGVRAEIRQLD 60

Query: 91  LSSL----ASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHF 144
           LS L     ++            ++++L+NNAG M   PF+ +  D     F  +  G F
Sbjct: 61  LSDLPEGAQALDKLIQRLG----RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAF 116

Query: 145 LLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           L         +  AR   K G  GRIIN++S       HE         P    G  AY+
Sbjct: 117 LC-------SQIAARHMVKQGQGGRIINITS------VHEHT-------PL--PGASAYT 154

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
            +K A       +A  L E G  I  N+V PGAIAT
Sbjct: 155 AAKHALGGLTKAMALELVEHG--ILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 37/217 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           S   AIVTGA+ GIG   AR LA  G  V +     A      + +V EI +A  +  A+
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNY---AGSAAAADELVAEIEAAGGRAIAV 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLG 142
           + D++  A+V            ++++L+NNAG+M    + +  + +L+      ATN  G
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM---PLGTIADFDLEDFDRTIATNLRG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            F+        +++ AR  G  GRIIN+S+    L             P    G  A S+
Sbjct: 118 AFV-------VLREAARHLGQGGRIINLSTSVIALPL-----------PGY--GPYAASK 157

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNI 239
           + +  ++H   LA  L+  G  IT N+V PG +AT +
Sbjct: 158 AAVEGLVHV--LANELR--GRGITVNAVAPGPVATEL 190

Length = 245

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 71.3 bits (175), Expect = 2e-14
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 15/156 (9%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
             +D +G   ++TGA+SGIG   A   A RG  VV     +A  +D+ + +   I  A  
Sbjct: 34  QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVA----VARREDLLDAVADRITRAGG 89

Query: 85  DAMEL--DLSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD---NIELQFAT 138
           DAM +  DLS L +V    ++   +   ++ILINNAG  +  P   S D   ++E     
Sbjct: 90  DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL 149

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG 174
           N+     L   L   M    R   G+G IINV++ G
Sbjct: 150 NYYAPLRLIRGLAPGM--LER---GDGHIINVATWG 180

Length = 293

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 36/213 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG  TA+ LA  G  VV+   D  A +     +       +   +  
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVAC 477

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE-------LQFATNHLG 142
           D++  A+V+    E  +    ++I+++NAGI      +S    E         F  N  G
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGI-----AISGPIEETSDEDWRRSFDVNATG 532

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
           HF    L+     +  +  G  G I+ ++S+               N  +    F AY  
Sbjct: 533 HF----LVAREAVRIMKAQGLGGSIVFIASK---------------NAVNPGPNFGAYGA 573

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAI 235
           +K A +    +LA  L  DG  I  N V+P A+
Sbjct: 574 AKAAELHLVRQLALELGPDG--IRVNGVNPDAV 604

Length = 681

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 67/219 (30%), Positives = 93/219 (42%), Gaps = 33/219 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG   +VTGA SGIG ETA   A  G  VV    D AA +   E I      A   A  +
Sbjct: 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRV 371

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           D+S   ++  FA     +H   +I++NNAGI M   F        L  +       L  N
Sbjct: 372 DVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGF--------LDTSAEDWDRVLDVN 423

Query: 149 L--LLDTMKKTARK---SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           L  ++   +   R+    G  G I+NV+S     AY           PS      AY+ S
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVASAA---AY----------APS--RSLPAYATS 468

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           K A ++ +  L   L   G+ +TA  + PG + TNI+  
Sbjct: 469 KAAVLMLSECLRAELAAAGIGVTA--ICPGFVDTNIVAT 505

Length = 582

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 40/225 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA   IG    + L   G  +++   +  A + +KE +   +   +V A+EL
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALEL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFM-LSKDNIELQFATNHLGHF 144
           D++S  S++     Y  +  +++ILINNA       G+ F     +        N  G F
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L +   +   KK      G+G IIN++S               +  P     FR Y  ++
Sbjct: 120 LCSQAFIKLFKKQ-----GKGSIINIAS------------IYGVIAPD----FRIYENTQ 158

Query: 205 L----------ANILHANE-LARRLKEDGVDITANSVHPGAIATN 238
           +          A I+H  + LA+   + G  I  N++ PG I  N
Sbjct: 159 MYSPVEYSVIKAGIIHLTKYLAKYYADTG--IRVNAISPGGILNN 201

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 70.0 bits (172), Expect = 5e-14
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+SGIG  TAR LA +G  V    R +   +D+         S  V  + LD++
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVT 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             AS++        +  ++++L+NNAG    G    +  D    QF  N  G   LT L+
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLA------YH 180
           L  M+         GRIIN+SS G ++       YH
Sbjct: 117 LPHMRAQ-----RSGRIINISSMGGKIYTPLGAWYH 147

Length = 273

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 7e-14
 Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 36/217 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           + ++TG +SGIG   AR L   G  V    R        KE  V  + +  ++A +LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCR--------KEEDVAALEAEGLEAFQLDYA 57

Query: 93  SLASVRNFASE-YNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTN 148
              S+    ++   +   +L+ L NN G  G P     L  + +  QF  N  G   LT 
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTR 116

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            ++  M+K      G+GRI+  SS    +                Y G  AY+ SK A  
Sbjct: 117 RVIPVMRKQ-----GQGRIVQCSSILGLVPMK-------------YRG--AYNASKFA-- 154

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
           +    L  R++  G  I  + + PG I T   R N+L
Sbjct: 155 IEGLSLTLRMELQGSGIHVSLIEPGPIETR-FRANAL 190

Length = 277

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.8 bits (171), Expect = 9e-14
 Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA- 82
           T+  D SG  A+VTGA +G+G   A  LA  G  VV  V D+A+  D  + +  EI +A 
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVV--VNDVASALDASDVL-DEIRAAG 61

Query: 83  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FMLSKDNIELQFATN 139
            K  A+  D+S  A+         +    L+I++NNAGI      F +S +  +   A +
Sbjct: 62  AKAVAVAGDISQRATADELV-ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVH 120

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGE--GRIINVSSE 173
             GHFLLT       +  A+ +GG   GRI+N SSE
Sbjct: 121 LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSE 156

Length = 306

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 68.8 bits (169), Expect = 9e-14
 Identities = 59/221 (26%), Positives = 81/221 (36%), Gaps = 49/221 (22%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G   +VTGA  GIG      L  RG   V    RD  +  D+           +V  ++L
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL---------GPRVVPLQL 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSK--DNIELQFATNHLGHFLL 146
           D++  ASV   A         + IL+NNAGI      +L    D +  +  TN+ G   +
Sbjct: 57  DVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                  +      +GG G I+NV S    +           N P        YS SK A
Sbjct: 113 ARAFAPVLA----ANGG-GAIVNVLSVLSWV-----------NFP----NLGTYSASKAA 152

Query: 207 -----NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  L A ELA +            VHPG I T++   
Sbjct: 153 AWSLTQALRA-ELAPQ------GTRVLGVHPGPIDTDMAAG 186

Length = 238

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 69.0 bits (169), Expect = 9e-14
 Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 26/207 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTG  SGIG   A+ LA  G  VV+   D    + V E         +   ++ D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE---AAQGGPRALGVQCD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTN 148
           ++S A V++   +  ++   L+I+++NAGI  + P    S ++       N  GHFL++ 
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                MK      G  G I+  +S+    A   G                AYS +K A  
Sbjct: 118 EAFRIMK----SQGIGGNIVFNASKN---AVAPGP------------NAAAYSAAKAAEA 158

Query: 209 LHANELARRLKEDGVDITANSVHPGAI 235
             A  LA    EDG  I  N+V+P A+
Sbjct: 159 HLARCLALEGGEDG--IRVNTVNPDAV 183

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 29/213 (13%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 91
           A+VTG + GIG   A  LA RG  VV+  R     KD    +  EI      A+ +  D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRK---SKDAAAEVAAEIEELGGKAVVVRADV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S    V    +    +  +L++L++NA      P   L+  + + +  TN          
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               M++      G GRI+ +SS G   A                  + A   +K A   
Sbjct: 118 AAKLMRER-----GGGRIVAISSLGSIRALP---------------NYLAVGTAKAALEA 157

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               LA  L   G  I  N+V PG I T+ + H
Sbjct: 158 LVRYLAVELGPRG--IRVNAVSPGVIDTDALAH 188

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 25/213 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
            ++TG + G+G   A  LA  G  V++       G+   + +   I +A  K   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
              A+ R        +  +L+IL+NNAGI     F  LS +  +     N  G F +T  
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQA 128

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L  M +        GRI+N++S         G+R        G  G   Y+ SK   I 
Sbjct: 129 ALPPMIRA----RRGGRIVNIASVA-------GVR--------GNRGQVNYAASKAGLIG 169

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               LA  L   G  IT N+V PGAI T +  +
Sbjct: 170 LTKTLANELAPRG--ITVNAVAPGAINTPMADN 200

Length = 249

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 39/235 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELD 90
            AI+TGA  GIG   A  LA  G ++V  + D+   +  K TI +EI  A  +A+    D
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIV--LADLNLEEAAKSTI-QEISEAGYNAVAVGAD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++    V     +   +    ++++NNAGI   TP + +++++++  +A N  G      
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 149 LLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 KK     G  G+IIN SS  G +                G+    AYS SK A 
Sbjct: 121 AAARQFKKL----GHGGKIINASSIAGVQ----------------GFPNLGAYSASKFAV 160

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 262
                  A+ L   G  IT N+  PG + T +          + I   +  IAGK
Sbjct: 161 RGLTQTAAQELAPKG--ITVNAYAPGIVKTEM---------WDYIDEEVGEIAGK 204

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 25/153 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA SGIG E A  LA  G  VV+   +  A     E + K     K   + +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAM 60

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATN--------H 140
           D++   ++ N   +Y ++    ++IL+NNAGI           IE  F T          
Sbjct: 61  DVTDEEAI-NAGIDYAVETFGGVDILVNNAGIQHV------APIE-DFPTEKWKKMIAIM 112

Query: 141 L-GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L G FL T   L  MK       G GRIIN++S
Sbjct: 113 LDGAFLTTKAALPIMKAQ-----GGGRIINMAS 140

Length = 258

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA SG G   AR  A  G  VV+   +    + V      +I  A + A++ D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV----AADIGEAAI-AIQAD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLT 147
           ++  A V         +  +L+IL+NNAGI      +    ++  +  FA N    +L  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
             L+  M++      G G IIN++S  
Sbjct: 120 QALVPHMEE-----QGGGVIINIASTA 141

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 35/209 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T +VTGA  GIG      L   G   V   VRD  +       +V +    KV  + LD+
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH----LVAKYGD-KVVPLRLDV 59

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE---LQFATNHLGHFLLTN 148
           +   S++  A+    Q   ++++INNAG++    +L +  +E    +   N  G   L  
Sbjct: 60  TDPESIKAAAA----QAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQ 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                +K       G G I+N++S               +     +     YS SK A  
Sbjct: 116 AFAPVLKAN-----GGGAIVNLNS---------------VASLKNFPAMGTYSASKSAAY 155

Query: 209 LHANELARRLKEDGVDITANSVHPGAIAT 237
                L   L   G  +   SVHPG I T
Sbjct: 156 SLTQGLRAELAAQGTLVL--SVHPGPIDT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 60/218 (27%), Positives = 83/218 (38%), Gaps = 36/218 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA+VTGA SGIG   AR LA  G +VV  V D           V       V  +  D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVV--VNDFGEEGAEAAAKVAGDAGGSVIYLPAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHF 144
           ++    + +  +    +   L+IL+NNAGI         P     ++ +   A      F
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP----EDWDRIIAVMLTSAF 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
                 L  MKK      G GRIIN++S  G                        AY  +
Sbjct: 115 HTIRAALPHMKK-----QGWGRIINIASAHGLV----------------ASPFKSAYVAA 153

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           K   I     LA  + E G  IT N++ PG + T ++ 
Sbjct: 154 KHGLIGLTKVLALEVAEHG--ITVNAICPGYVRTPLVE 189

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 4e-13
 Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 48/215 (22%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SG G E A  LA +G +V+ GV+           I  ++ + + +A    L+
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQ-----------IAPQVTALRAEAARRGLA 52

Query: 93  SLASVRNFASEYNIQH---HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
                 +     +        +++L+NNAGI   G    +  + +   F TN  G   LT
Sbjct: 53  LRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELT 112

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  M   AR     G+++  SS         G+    I  P  + G  AY  SK   
Sbjct: 113 QGFVRKM--VARGK---GKVVFTSSMA-------GL----ITGP--FTG--AYCASK--- 149

Query: 208 ILHANE-----LARRLKEDGVDITANSVHPGAIAT 237
             HA E     +   LK  G+ +   +V+PG   T
Sbjct: 150 --HALEAIAEAMHAELKPFGIQVA--TVNPGPYLT 180

Length = 257

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 4e-13
 Identities = 58/216 (26%), Positives = 82/216 (37%), Gaps = 42/216 (19%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG + +VTGA+SGIG   A  LA RG  VV   R+ AA   +             + +
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPL 58

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFL 145
            LD+   A++R   +         + L+N AGI  + +   ++ +  +   A N  G  L
Sbjct: 59  RLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 146 LTNLLLDTMKKTARK---SGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYS 201
                    +  AR    +G  G I+NVSS+                    G     AY 
Sbjct: 115 -------VARHVARAMIAAGRGGSIVNVSSQAALV----------------GLPDHLAYC 151

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
            SK A       L   L   G  I  NSV+P    T
Sbjct: 152 ASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLT 185

Length = 245

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 67.1 bits (164), Expect = 5e-13
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+TSGIG   AR LA  G ++V+ G  D A  + V+  +  +    KV    
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAK-HGVKVLYHG 59

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLL 146
            DLS  A++ +  +    Q   ++IL+NNAGI     +     +  +   A N    F  
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T L L  MKK      G GRIIN++S
Sbjct: 120 TRLALPHMKKQ-----GWGRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 19/149 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G T ++TG  SGIG   A+     G  V++  R+     + K     E P   +     
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK----AENPE--IHTEVC 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGH 143
           D++   S R        ++  LN+LINNAGI       G   +L  D+ E + ATN L  
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLL--DDAEQEIATNLLAP 115

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             LT LLL  + +       E  IINVSS
Sbjct: 116 IRLTALLLPHLLRQP-----EATIINVSS 139

Length = 245

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 8e-13
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTGA  GIG   AR  A  G  V +   D A  +     I +++  A+V A+  D
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPAD 66

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++  ASV    +        L++L+NNAGI     P  ++ ++    FA +  G +    
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +L  M    R   G G I+N++S
Sbjct: 127 AVLPGM--VER---GRGSIVNIAS 145

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 66.2 bits (162), Expect = 9e-13
 Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 26/206 (12%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +VTGA  GIG   AR LA  G   V  V D    + ++               +LD++ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGA-RVAAV-DRNFEQLLELVADLRRYGYPFATYKLDVAD 58

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A+V         ++  +++L+N AGI  +G    LS ++ +  FA N  G F ++  + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             MK   R+SG    I+ V S    +                  G  AY+ SK A  +  
Sbjct: 119 PRMK--RRRSGA---IVTVGSNAANVPRM---------------GMAAYAASKAALTMLT 158

Query: 212 NELARRLKEDGVDITANSVHPGAIAT 237
             L   L   G  I  N V PG+  T
Sbjct: 159 KCLGLELAPYG--IRCNVVSPGSTDT 182

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.9 bits (161), Expect = 9e-13
 Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 26/217 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A++TGA  GIG   A  LA  GV+V +  R     K V E +       KV     D
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATAD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +S    V     +   +   ++ILINNAGI   G    L     E     N +G +  T 
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATR 124

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            +L +M +  R+SG    IIN+SS         G +        G     AYS SK   +
Sbjct: 125 AVLPSMIE--RQSGD---IINISSTA-------GQK--------GAAVTSAYSASKFGVL 164

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
                L + +++  + +TA  + P  +AT++     L
Sbjct: 165 GLTESLMQEVRKHNIRVTA--LTPSTVATDMAVDLGL 199

Length = 239

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 58/216 (26%), Positives = 85/216 (39%), Gaps = 29/216 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
            AIVTGA+ GIG   A  LA RG  + +     D  A + V E         +    + D
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEV---LAAGRRAIYFQAD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLL 146
           +  L+       +      +L+ L+NNAGI   P      L++D+ +   A N  G F L
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 147 TNLLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA-YSQSK 204
           T  +   M ++  R  G    II V+S    L                    R  Y  SK
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPN----------------RGEYCISK 163

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNII 240
               +    LA RL ++G  I  + + PG I T++ 
Sbjct: 164 AGLSMATRLLAYRLADEG--IAVHEIRPGLIHTDMT 197

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 38/212 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDL 91
            ++TGA+SGIG   AR  A  G +V +  R      D  + +  E+  P+  V+   LD+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF--MLSKDNIELQFATNHLGHFLLTN 148
           +     +   +E   +   L+++I NAG+  GT    +  K   E    TN LG   +  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILE 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKL 205
             L   +  A+  G    ++ +SS                   +   G     AYS SK 
Sbjct: 116 AALPQFR--AKGRGH---LVLISS------------------VAALRGLPGAAAYSASKA 152

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
           A    A  L   +K+ G+ +T   ++PG I T
Sbjct: 153 ALSSLAESLRYDVKKRGIRVT--VINPGFIDT 182

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 21/211 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   AR L   G+ VV   R +   + +     +      +   + 
Sbjct: 5   RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAE-CQSAGYPTLFPYQC 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLT 147
           DLS+   + +  S    QH  +++ INNAG+     +LS      +  F  N L   + T
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICT 123

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                +MK   R    +G IIN++S  GHR+             P     F  Y+ +K A
Sbjct: 124 REAYQSMK--ERNV-DDGHIININSMSGHRVP------------PVSVFHF--YAATKHA 166

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
                  L + L+E    I A S+ PG + T
Sbjct: 167 VTALTEGLRQELREAKTHIRATSISPGLVET 197

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 17/151 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G   ++TGA+SGIG  TA  +A  G  V +  R+   G+ + E  V EI +      A  
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN---GEALDEL-VAEIRAKGGTAHAYT 426

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKD---NIELQFATNHLGH 143
            DL+  A+V +   +   +H  ++ L+NNAG  I  +    S D   + E   A N+ G 
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGA 485

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEG 174
             L   LL  M    R+    G ++NVSS G
Sbjct: 486 VRLILGLLPHM--RERRF---GHVVNVSSIG 511

Length = 657

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 61/225 (27%), Positives = 86/225 (38%), Gaps = 31/225 (13%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            D     G  AIVTG + GIG   AR LA  G  V +        ++  E + K+    K
Sbjct: 1   LDLFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-K 59

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHL 141
             A + D+SS  SV     +      +++ILI NAGI +  P +  + +        N  
Sbjct: 60  TKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLN 119

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDP---SGYNGF 197
           G F          KK      G+G +I  +S  G             +N P   + YN  
Sbjct: 120 GVFNCAQAAAKIFKKQ-----GKGSLIITASMSGTI-----------VNRPQPQAAYNA- 162

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                SK A I  A  LA    +    I  NS+ PG I T++   
Sbjct: 163 -----SKAAVIHLAKSLAVEWAKYF--IRVNSISPGYIDTDLTDF 200

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 30/216 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G  A+VTGA+SGIG  TAR LA  G  V +  R      D  E +  E+ +   K   +E
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARR----VDRLEALADELEAEGGKALVLE 58

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLL 146
           LD++    V            +L+IL+NNAGIM    +   D  +      TN LG    
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T+  L       R     G I+N+SS   R+A                     Y+ +K  
Sbjct: 119 THAALPHHL--LRNK---GTIVNISSVAGRVA---------------VRNSAVYNATKFG 158

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               +  L + + E GV +    + PG + T +  H
Sbjct: 159 VNAFSEGLRQEVTERGVRVVV--IEPGTVDTELRDH 192

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 32/213 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG+  G+G E AR LA  G HV++  R+ A  +     +     +A  +A+  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAF 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D++   +V    +  + +H +L+IL+NN G      +  L    I     T+ +   LL+
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND---PSGYNGFRAYSQSK 204
            L    MK+      G GRII ++S   ++A        +  D   P+   G     ++ 
Sbjct: 128 RLAAQRMKR-----QGYGRIIAITSIAGQVA--------RAGDAVYPAAKQGLTGLMRAL 174

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIAT 237
                 A E           IT+N++ PG  AT
Sbjct: 175 ------AAEFGPH------GITSNAIAPGYFAT 195

Length = 256

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 64.5 bits (158), Expect = 3e-12
 Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
            +D SG T  VTGA  GIG   A      G  V+        G D      ++ P     
Sbjct: 3   AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVI--------GFDQAFLTQEDYP---FA 51

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGH 143
              LD+S  A+V         +   L++L+N AGI  MG    LS ++ +  FA N  G 
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           F L   ++   +   ++SG    I+ V S
Sbjct: 112 FNLFRAVMPQFR--RQRSGA---IVTVGS 135

Length = 252

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 34/219 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A  LA  G ++V+  R+    ++ ++ I KE    +  A   
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAFTC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D+S   +++           +++IL+NNAGI+         +         N  G F ++
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVS 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--L 205
             +   M K      G G+IIN+ S               +    G     AY+ SK  +
Sbjct: 122 QAVARHMIKQ-----GHGKIINICS---------------LLSELGGPPVPAYAASKGGV 161

Query: 206 ANILH--ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           A +    A E AR        I  N++ PG  AT +   
Sbjct: 162 AGLTKALATEWARH------GIQVNAIAPGYFATEMTEA 194

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 65/214 (30%), Positives = 91/214 (42%), Gaps = 27/214 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AIVTGA SGIG  TA++ A  G  VV+  RD  A + V   I       +  A + 
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQG 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+ S  +V         +  +L++L+NNAG    GT     + + +     N  G FL  
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  M    ++ GG G I+N +S+   LA             +G  G  AY  SK A 
Sbjct: 121 KYAIPIM----QRQGG-GSIVNTASQ---LAL------------AGGRGRAAYVASKGAI 160

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                 +A     DG  I  N+V PG I T   R
Sbjct: 161 ASLTRAMALDHATDG--IRVNAVAPGTIDTPYFR 192

Length = 252

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 63.4 bits (155), Expect = 7e-12
 Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 30/219 (13%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGAT GIG   A  LA RG +V++  R       V + I ++    +   +  D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAADFSA 62

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI---MGTPFM-LSKDNIELQFATNHLGHFLLTNL 149
              +     E  ++   + IL+NN GI   +   F+   +D ++     N +    +T L
Sbjct: 63  GDDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +L  M K  RK G    I+N+SS    +             P+       YS SK     
Sbjct: 122 ILPGMVK--RKKGA---IVNISSFAGLI-------------PTPL--LATYSASKAFLDF 161

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNI--IRHNSLF 246
            +  L    K  G+D+   S+ P  +AT +  IR +SLF
Sbjct: 162 FSRALYEEYKSQGIDV--QSLLPYLVATKMSKIRKSSLF 198

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)

Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
             G  A++TG + GIG   A  L   G  V +  RD    ++    +  +     V  + 
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLA 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
            D+   A V+            L++LI NAG+        L+ +   L   TN  G F  
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQS 203
               +  +K+      G G IIN+SS    LA              G N F    AY+ S
Sbjct: 121 IKAAVPALKR------GGGYIINISS----LA--------------GTNFFAGGAAYNAS 156

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATN 238
           K   +  +      L++ G+ ++  ++ PG++AT+
Sbjct: 157 KFGLVGFSEAAMLDLRQYGIKVS--TIMPGSVATH 189

Length = 237

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 27/211 (12%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG   GIGT   + LA  G  V      +    +   +   +         +E D+S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           S  S +   ++   +   +++L+NNAGI    T   ++ +       TN    F +T  +
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPV 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           +D M++      G GRIIN+SS               +N   G  G   YS +K   I  
Sbjct: 121 IDGMRER-----GWGRIINISS---------------VNGQKGQFGQTNYSAAKAGMIGF 160

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIR 241
              LA+     GV  T N++ PG IAT+++ 
Sbjct: 161 TKALAQEGATKGV--TVNTISPGYIATDMVM 189

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 61/224 (27%), Positives = 86/224 (38%), Gaps = 41/224 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-----DIAAGKDVKETI---VKEIPS 81
           SG  A VTGA+ GIG   A  LA  G  VV+  +     D  + K +  TI    +EI +
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 82  AKVDAM--ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN 139
           A   A+   +D+     VR        Q  +L+IL+NNAG +    +             
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQR 121

Query: 140 HL--GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
               G +LL+   L  M K      G+G I+N+S                   P      
Sbjct: 122 VNLRGTYLLSQAALPHMVKA-----GQGHILNISP------------------PLSLRPA 158

Query: 198 R---AYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIAT 237
           R   AY+  K         LA  L+  G+ +  NS+ P  AI T
Sbjct: 159 RGDVAYAAGKAGMSRLTLGLAAELRRHGIAV--NSLWPSTAIET 200

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 34/215 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA  GIG   A  LA  G  VV+   +    + V + IV +  +A   A+++D+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVS 65

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSK---DNIELQFATNHLGHFLLT 147
              S +  A         ++ L+NNA I G     +L     D  +   + N  G  + T
Sbjct: 66  DPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCT 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA- 206
             +   M     K GG G I+N SS    L                Y+ F  Y  +K+  
Sbjct: 126 RAVYKHM----AKRGG-GAIVNQSSTAAWL----------------YSNF--YGLAKVGL 162

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           N L    LAR L   G++I  N++ PG I T   R
Sbjct: 163 NGLTQQ-LAREL--GGMNIRVNAIAPGPIDTEATR 194

Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 35/217 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM----GVRDIAAGKDVKETIVKEIPSAKVDA 86
           G  A++TG  SGIG   A   A  G  V +       D A  ++ K+ I  E    K   
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDA--EETKKLI--EEEGRKCLL 81

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGH 143
           +  DL   +  R+   E   +  +L+IL+NNA        +   + + +E  F TN    
Sbjct: 82  IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSM 141

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           F LT   L  +KK +        IIN +S     AY            S +     Y+ +
Sbjct: 142 FYLTKAALPHLKKGS-------SIINTTS---VTAY----------KGSPH--LLDYAAT 179

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
           K A +     L+ +L E G  I  N+V PG I T +I
Sbjct: 180 KGAIVAFTRGLSLQLAEKG--IRVNAVAPGPIWTPLI 214

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 28/212 (13%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 91
            I+TGA+ GIG  TA + A RG  V +        +D  E +V+ I     +A+ +  D+
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYL---RNRDAAEAVVQAIRRQGGEALAVAADV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-DNIELQ--FATNHLGHFLLTN 148
           +  A V       + +  +L+ L+NNAGI+     L + D   L   FATN +G FL   
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 149 LLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              + +K+ + + GG  G I+NVSS   RL                   +  Y+ SK A 
Sbjct: 122 ---EAVKRMSTRHGGRGGAIVNVSSMAARLG--------------SPGEYIDYAASKGAI 164

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI 239
                 LA+ +  +G  I  N+V PG I T I
Sbjct: 165 DTMTIGLAKEVAAEG--IRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 34/213 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
             I+TGA+ GIG   A  LA  G  +V+  R+         ++ +E+     +A+ +  D
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETR----LASLAQELADHGGEALVVPTD 58

Query: 91  LSSLASVRNFASEYNIQHH-QLNILINNAGI-MGTPFMLSKDNIELQ--FATNHLGHFLL 146
           +S   +      E  +     ++IL+NNAGI M + F    D    +     N+LG    
Sbjct: 59  VSDAEACER-LIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYC 117

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T+  L  +K +       G+I+ VSS    LA   G+        +G      Y+ SK A
Sbjct: 118 THAALPHLKAS------RGQIVVVSS----LA---GL--------TGVPTRSGYAASKHA 156

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
                + L   L +DGV +T   V PG +AT+I
Sbjct: 157 LHGFFDSLRIELADDGVAVTV--VCPGFVATDI 187

Length = 263

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 58/212 (27%), Positives = 84/212 (39%), Gaps = 32/212 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+SGIG  TA   A  G  + +  R   A + +   +       K  A  +DLS
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNLL 150
           +  ++    +E   Q    ++LINNAG+  T  +L     + Q     N    F   + +
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSKLAN 207
           L  M    R  GG G IINVSS                   +  N F    AY  SK A 
Sbjct: 126 LPGM----RARGG-GLIINVSS--I----------------AARNAFPQWGAYCVSKAAL 162

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI 239
                 LA   +  G  I   ++  GA+ T +
Sbjct: 163 AAFTKCLAEEERSHG--IRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 61/210 (29%), Positives = 87/210 (41%), Gaps = 30/210 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELD 90
            A+VTGATSGIG   AR L   G+ V +  R     + +  T VKE+     + D    D
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATT-VKELREAGVEADGRTCD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF---ATNHLGHFLLT 147
           + S+  +    +    ++  +++L+NNAG  G        + EL      TN  G F +T
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELAD-ELWLDVVETNLTGVFRVT 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +L   K       G GRIIN++S G +                G      YS SK   
Sbjct: 120 KEVL---KAGGMLERGTGRIINIASTGGK---------------QGVVHAAPYSASKHGV 161

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +     L   L   G  IT N+V PG + T
Sbjct: 162 VGFTKALGLELARTG--ITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 33/220 (15%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
           T+  D +G  A+VTGA+ GIG   A++LA +G HV++  R +   + V + IV      K
Sbjct: 1   TNLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGK 58

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF---MLSKDNIELQ--FAT 138
            +A+   +  +  +    +    +H +L+IL+NNA     P+   +L  D    Q     
Sbjct: 59  AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAA--ANPYFGHILDTDLGAFQKTVDV 116

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGF 197
           N  G+F ++      MK+      G G I+NV+S  G      +GI              
Sbjct: 117 NIRGYFFMSVEAGKLMKE-----QGGGSIVNVASVNGVSPGDFQGI-------------- 157

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
             YS +K A I      A+     G  I  N++ PG   T
Sbjct: 158 --YSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDT 193

Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 36/211 (17%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TGA+SGIG  TA   A RG  VV+  R   A  ++   +       +  A+  D++  
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVADA 61

Query: 95  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
           A V   A     +  +++  +NNAG  + G    ++ +     F  N+LGH   T   L 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR------AYSQSKLA 206
            +++      G G +INV S                       G+R      AYS SK A
Sbjct: 122 HLRR-----RGGGALINVGSLL---------------------GYRSAPLQAAYSASKHA 155

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
                  L   L  DG  I+   V P A+ T
Sbjct: 156 VRGFTESLRAELAHDGAPISVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 41/224 (18%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +D +G  A+VTGA  GIG  T + LA  G  VV   R  A   D+ +++V+E P   ++ 
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQA---DL-DSLVRECPG--IEP 56

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHF 144
           + +DLS   +      E       +++L+NNA + +  PF+ ++K+  +  F  N     
Sbjct: 57  VCVDLSDWDATE----EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            ++ ++   M   AR   G   I+NVSS+  + A                     Y  +K
Sbjct: 113 HVSQIVARGMI--ARGVPGS--IVNVSSQASQRA---------------LTNHTVYCSTK 153

Query: 205 LA----NILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
            A      + A EL          I  NSV+P  + T++ R N 
Sbjct: 154 AALDMLTKVMALELGPH------KIRVNSVNPTVVMTDMGRDNW 191

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG  TAR+L   G  V +  RD      +     +E+    V  +  D+  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELE--GVLGLAGDVRD 57

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A VR            L+ L+NNAG+  M     L+ +   L   TN  G F   +   
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             + +      G G I+NV S   + A+  G                AY+ SK   +  +
Sbjct: 118 PALLRR-----GGGTIVNVGSLAGKNAFKGGA---------------AYNASKFGLLGLS 157

Query: 212 NELARRLKEDGVDITANSVHPGAIAT 237
                 L+E  + +   +V PG++ T
Sbjct: 158 EAAMLDLREANIRVV--NVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 61.4 bits (149), Expect = 4e-11
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 28/213 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
             ++TGA+ GIG  TA + A RG  V +   RD AA ++  + +       +   +  D+
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLLT 147
           ++ A V            +L+ L+NNAGI+  P M    +    +   F TN LG +L  
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 148 NLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
               +  ++ +   GG  G I+NVSS   RL             P   N +  Y+ SK A
Sbjct: 121 R---EAARRLSTDRGGRGGAIVNVSSIASRLG-----------SP---NEYVDYAGSKGA 163

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
                  LA+ L   GV +  N+V PG I T I
Sbjct: 164 VDTLTLGLAKELGPHGVRV--NAVRPGLIETEI 194

Length = 248

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 17/152 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA SGIG   A      G  VV+     A  +     I          A+ L
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++   S+    +    +   ++IL NNA +  M     +S+D+ +  FA N  G F   
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFF-- 117

Query: 148 NLLLDTMKKTAR---KSGGEGRIINVSSEGHR 176
                 M+  AR   + G  G+IIN++S+  R
Sbjct: 118 -----LMQAVARHMVEQGRGGKIINMASQAGR 144

Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 33/216 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G TA+VTG T GIG      LA  G  V    R+    K++ E  + E      KV+   
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARN---QKELDE-CLTEWREKGFKVEGSV 61

Query: 89  LDLSSLASVRNFASEYNIQHH--QLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHF 144
            D+SS  S R    +    H   +LNIL+NNAG  I       ++++  L  +TN    +
Sbjct: 62  CDVSS-RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            L+ L    +K +       G I+ +SS    +A            PSG      Y  +K
Sbjct: 121 HLSRLAHPLLKASGN-----GNIVFISSVAGVIAV-----------PSG----APYGATK 160

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNII 240
            A       LA    +D   I  N+V P  IAT ++
Sbjct: 161 GALNQLTRSLACEWAKDN--IRVNAVAPWVIATPLV 194

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 61.4 bits (149), Expect = 4e-11
 Identities = 65/217 (29%), Positives = 89/217 (41%), Gaps = 36/217 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD-AMEL 89
           G  AIVTGA +GIG   A  LA  G  VV+   D  A + V   I     + +VD   E 
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQ 62

Query: 90  DLSSL--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHF 144
            +++L   +V  F          L++L+NNAG M     +   ++ +     A N  G F
Sbjct: 63  QVAALFERAVEEFGG--------LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTF 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L        M       GG G I+N+SS               I   SG  G+ AY  SK
Sbjct: 115 LCCRHAAPRM----IARGG-GSIVNLSS---------------IAGQSGDPGYGAYGASK 154

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A       LA  L+  G  I  N++ PG I T ++ 
Sbjct: 155 AAIRNLTRTLAAELRHAG--IRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 59/210 (28%), Positives = 83/210 (39%), Gaps = 33/210 (15%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            IVTGA  GIG   AR L   G  V           D+   ++ E     +    LD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--------IALDLPFVLLLEYG-DPLRLTPLDVAD 51

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A+VR   S    +H  ++ L+N AG+   G    LS ++ E  FA N  G F L   + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             MK   R++G    I+ V+S             +  + P       AY  SK A    +
Sbjct: 112 PHMK--DRRTGA---IVTVAS-------------NAAHVPR--ISMAAYGASKAALASLS 151

Query: 212 NELARRLKEDGVDITANSVHPGAIATNIIR 241
             L   L   GV    N V PG+  T + R
Sbjct: 152 KCLGLELAPYGV--RCNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 5e-11
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 40/218 (18%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKV-DAMELD 90
             VTGA SGIG  TA  LA +G  + +  RD A G       V +  +    V +   LD
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRD-ADG---LAQTVADARALGGTVPEHRALD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLG--HFLL 146
           +S   +V  FA++ +  H  +++++N AGI   GT   L+ +        N +G  H   
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH--- 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLA--YHEGIRFDKINDPSGYNGFRAYSQSK 204
              +++T       +G  G ++NVSS    +A  +H                  AYS SK
Sbjct: 116 ---VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHA-----------------AYSASK 155

Query: 205 LANILHANELAR-RLKEDGVDITANSVHPGAIATNIIR 241
              +   +E+ R  L   G+ ++   V PGA+ T ++ 
Sbjct: 156 FG-LRGLSEVLRFDLARHGIGVSV--VVPGAVKTPLVN 190

Length = 272

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 61.3 bits (149), Expect = 5e-11
 Identities = 59/226 (26%), Positives = 82/226 (36%), Gaps = 44/226 (19%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAME 88
              A++TG T  +G   AR LA  G  V    R+   G  V     KEI +   +  A+ 
Sbjct: 5   NKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKV----AKEITALGGRAIALA 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG----------------IMGTPFMLSKDNI 132
            D+   AS+     E   Q   ++ILIN AG                     F L ++  
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
           E  F  N  G FL + +    M +        G IIN+SS     A+       K+    
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLE-----QKGGSIINISSMN---AF---SPLTKV---- 165

Query: 193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN 238
                 AYS +K A       LA      GV +  N++ PG   T 
Sbjct: 166 -----PAYSAAKAAVSNFTQWLAVEFATTGVRV--NAIAPGFFVTP 204

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 8e-11
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 29/210 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTG  SGIG   A + A +G  V +  R      +V   ++          +  
Sbjct: 14  SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-EDVAEVAAQLL----GGNAKGLVC 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+S   SV    +       +++IL+N+AG+  +     +S+++ +     N  G FL+ 
Sbjct: 69  DVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMA 128

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +   M        G G+I+N++S+   +A    +               AY  SK   
Sbjct: 129 QAVGRHMIAA-----GGGKIVNLASQAGVVALERHV---------------AYCASKAGV 168

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +     LA  L+     IT N++ P  + T
Sbjct: 169 VGMTKVLA--LEWGPYGITVNAISPTVVLT 196

Length = 255

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 8e-11
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 30/211 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAME 88
           G TA++TGA  GIG   ARV A  G ++++    +    ++++    E+     +  A+ 
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLIL----LDISPEIEKL-ADELCGRGHRCTAVV 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D+   ASV         +  +++IL+NNAG+     F+ +S ++ +     N  G + +
Sbjct: 61  ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T  +L  M         +GRI+ +SS          +  D + DP    G  AY+ +K A
Sbjct: 121 TKAVLPEMIAR-----KDGRIVMMSS----------VTGDMVADP----GETAYALTKAA 161

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
            +     LA    + G  I  N++ PG + T
Sbjct: 162 IVGLTKSLAVEYAQSG--IRVNAICPGYVRT 190

Length = 263

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           ++TG  SG G   A+ L   G  V+ G       G       ++ + S ++  ++LD++ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGA----KELRRVCSDRLRTLQLDVTK 59

Query: 94  LASVRNFASEYNIQHHQ---LNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLLT 147
              ++  A+++  +H     L  L+NNAGI+G      +L  D+       N  G   +T
Sbjct: 60  PEQIKR-AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVT 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  +++ A+     GR++NVSS G R+ +  G                AY  SK A 
Sbjct: 119 KAFLPLLRR-AK-----GRVVNVSSMGGRVPFPAG---------------GAYCASKAAV 157

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF-RSMNTILHALP 257
              ++ L R L+  GV ++   + PG   T I  ++ L+ +    +   LP
Sbjct: 158 EAFSDSLRRELQPWGVKVSI--IEPGNFKTGITGNSELWEKQAKKLWERLP 206

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 14/150 (9%)

Query: 33  TAIVTGATSGIGTE-TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T  +TGA+SG G   T R+LA RG  V   VR   A  D+K          ++  ++LD+
Sbjct: 4   TWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           +  A+VR           +++++++NAG  + G    LS   I  Q  TN +G   +   
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRA 117

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            L  +    R+ GG GRI+ VSSEG ++AY
Sbjct: 118 ALPHL----RRQGG-GRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 32/217 (14%)

Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
                 +VTGA  GIG    +  A  G  VV+  R++   ++  +++          A+ 
Sbjct: 3   AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALA 57

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGH 143
           +D+S  A +R    + + +  ++++L+NNAG+   P M      + +      A N  G 
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTD-PTMTATLDTTLEEFARLQAINLTGA 116

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           +L+    L  M +    +     I+NV+S     A   G+               AYS S
Sbjct: 117 YLVAREALRLMIEQGHGAA----IVNVAS----GA---GLV--------ALPKRTAYSAS 157

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
           K A I     LA      G+ + A  V PG + T ++
Sbjct: 158 KAAVISLTRSLACEWAAKGIRVNA--VLPGYVRTQMV 192

Length = 520

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 33/214 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TG +SGIG   A      G  V    R        K   V+ + +A   A++LD++
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATAR--------KAEDVEALAAAGFTAVQLDVN 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             A++   A E   +H  L++LINNAG   MG       + +  QF TN      +T  L
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
              +++        G ++N+ S    L              + + G  AY  SK A  +H
Sbjct: 115 FPLLRR------SRGLVVNIGSVSGVLV-------------TPFAG--AYCASKAA--VH 151

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
           A   A RL+     +    V PGAIA+    + S
Sbjct: 152 ALSDALRLELAPFGVQVMEVQPGAIASQFASNAS 185

Length = 274

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 43/216 (19%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTGA  GIG   A VLA  G HVV    D+ AAG+ +       +      A+ L
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAV-ANRV---GGTALAL 263

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--------MGTPFMLSKDNIELQFATNHL 141
           D+++  +    A     +H  L+I+++NAGI        M       +   +   A N L
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANM------DEARWDSVLAVNLL 317

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
               +T  LL      A   G  GRI+ VSS               I+  +G  G   Y+
Sbjct: 318 APLRITEALLA-----AGALGDGGRIVGVSS---------------ISGIAGNRGQTNYA 357

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
            SK   I     LA  L E G  IT N+V PG I T
Sbjct: 358 ASKAGVIGLVQALAPLLAERG--ITINAVAPGFIET 391

Length = 450

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 59.6 bits (144), Expect = 2e-10
 Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 29/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           +G  AIVTG   GIG      LA  G  VV+   +  + K+  E +V E+      V A+
Sbjct: 5   NGKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           + D+S +        E      +++IL+NNAGI    T   L++++ E     N    F 
Sbjct: 62  QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            T+ +L  + +       EGRII++SS               I   +G  G   YS +K 
Sbjct: 122 TTSAVLPYITEAE-----EGRIISISS---------------IIGQAGGFGQTNYSAAKA 161

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNII 240
             +     LA  L +  V  T N++ PG I T ++
Sbjct: 162 GMLGFTKSLALELAKTNV--TVNAICPGFIDTEMV 194

Length = 247

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 43/210 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA++TGA+ GIG   AR LA     +++G R      ++      E+P A      +DL+
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAA----ELPGAT--PFPVDLT 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++   A+        L++L++NAG+  +G     + D        N +    LT LL
Sbjct: 58  DPEAI---AAAVEQLGR-LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN---GFRAYSQSKLAN 207
           L  ++               ++ GH +          IN  +G     G+ +Y+ SK A 
Sbjct: 114 LPALR---------------AAHGHVVF---------INSGAGLRANPGWGSYAASKFA- 148

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
            L A   A R +E G  +   SVHPG   T
Sbjct: 149 -LRALADALREEEPGN-VRVTSVHPGRTDT 176

Length = 227

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 63/214 (29%), Positives = 84/214 (39%), Gaps = 44/214 (20%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           +    T ++TGA SGIG   AR    +G  V         G D ++   K   S     +
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQD---KPDLSGNFHFL 50

Query: 88  ELDLSS-LASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQ--FATNHLGH 143
           +LDLS  L  + ++          ++IL N AGI+     +L     E Q  F TN    
Sbjct: 51  QLDLSDDLEPLFDWVP-------SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           FLLT   L  M    RKS   G IIN+ S               I       G  AY+ S
Sbjct: 104 FLLTRAYLPQML--ERKS---GIIINMCS---------------IASFVAGGGGAAYTAS 143

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           K A      +LA    +DG  I    + PGA+ T
Sbjct: 144 KHALAGFTKQLALDYAKDG--IQVFGIAPGAVKT 175

Length = 235

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 28/212 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAME 88
           G   ++TG +SGIG   A+ L   G +V++  R  +  ++  E I  E      KV  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FM-LSKDNIELQFATNHLGHFL 145
            DLS    V    ++   +    ++++N AG +  P  F  L+ +  E     N+ G   
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAG-ISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           + + +L  MK+        G I+ VSS+    A              G  G+ AY  SK 
Sbjct: 120 VAHAVLPLMKEQ-----RPGHIVFVSSQ---AALV------------GIYGYSAYCPSKF 159

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
           A    A  L + LK   + ++   V+P    T
Sbjct: 160 ALRGLAESLRQELKPYNIRVSV--VYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 34/222 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--VKEIPSAKVDAMELD 90
             +VTG+  GIG   A  LA  G  VV+  +  A  +++ ET+  VKE     +  +  D
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA--EEMNETLKMVKENGGEGIGVLA-D 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDN-IELQFATNHLGHFLLTN 148
           +S+       A     ++   +IL+NNAG+ + +PF+   D  I+   +T+       + 
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ 124

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            L   M++     GG   I+N++S    +A   GIR      P    G   Y   K A I
Sbjct: 125 ELAKEMRE-----GGA--IVNIAS----VA---GIR------P--AYGLSIYGAMKAAVI 162

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 250
                LA  L      I  N++ PG + T +    SLF+ + 
Sbjct: 163 NLTKYLALELAP---KIRVNAIAPGFVKTKL--GESLFKVLG 199

Length = 252

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 25/209 (11%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TG  SG+G  TA  LA  G  + +   +    +  K  +++  P A+V  ++ D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNLLL 151
           A V  +      Q  +++   NNAGI G   +      D  +   + N  G F     +L
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             M++      G G I+N +S G       GIR   + + SG      Y+ +K   +   
Sbjct: 127 KVMREQ-----GSGMIVNTASVG-------GIR--GVGNQSG------YAAAKHGVVGLT 166

Query: 212 NELARRLKEDGVDITANSVHPGAIATNII 240
              A    + G+ I  N++ PGAI T ++
Sbjct: 167 RNSAVEYGQYGIRI--NAIAPGAILTPMV 193

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 52/211 (24%), Positives = 80/211 (37%), Gaps = 39/211 (18%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+V G    +G      LA  G  V +   +     +V + I  E           D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTN 148
           S  SV   +   +    ++++L+ NAGI      T F L   +  LQ   N +G+FL   
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQ--VNLVGYFL--- 118

Query: 149 LLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQ 202
                 ++ +R   + G +GRII                  +IN  SG  G +    YS 
Sbjct: 119 ----CAREFSRLMIRDGIQGRII------------------QINSKSGKVGSKHNSGYSA 156

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPG 233
           +K   +     LA  L E G  IT +S+  G
Sbjct: 157 AKFGGVGLTQSLALDLAEYG--ITVHSLMLG 185

Length = 259

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 31/222 (13%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMEL 89
           A +TGA  G+G   AR +A +G  V   + DI       +    EI +A  +    A   
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVF--LTDINDA-AGLDAFAAEINAAHGEGVAFAAVQ 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  A  +   ++       L++L+NNAG+   G    +  D      A N    FL  
Sbjct: 59  DVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  +     ++     I+N+SS     A  +               + AY+ SK A 
Sbjct: 119 KHALPYL-----RASQPASIVNISSVAAFKAEPD---------------YTAYNASKAAV 158

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 249
                 +A      G+D+  NS+HP  I T I+  + +F+ +
Sbjct: 159 ASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV--DPIFQRL 198

Length = 251

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 33/213 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G  AI+TGA +GIG E A   A  G  VV  V DI A  D    +V EI     +  A  
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVV--VSDINA--DAANHVVDEIQQLGGQAFACR 66

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLT 147
            D++S   +   A     +  +++IL+NNAG  G  PF +   +    +  N    F L+
Sbjct: 67  CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            L+   M+K      G G I+ ++S     A ++ I               +Y+ SK A 
Sbjct: 127 QLVAPEMEK-----NGGGVILTITSMA---AENKNIN------------MTSYASSKAA- 165

Query: 208 ILHANELARRLKED--GVDITANSVHPGAIATN 238
              A+ L R +  D    +I  N + PGAI T+
Sbjct: 166 ---ASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195

Length = 255

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 13/147 (8%)

Query: 33  TAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
             ++TG +SGIG   A  LA    +   V   +RD+     + E     +    ++ ++L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+    SV        +    +++L+ NAG+  +G    LS+D +   F  N  G   + 
Sbjct: 61  DVCDSKSVAAAVE--RVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
              L  MK+  R S   GRI+  SS G
Sbjct: 119 QAFLPDMKR--RGS---GRILVTSSVG 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 58.1 bits (140), Expect = 6e-10
 Identities = 67/220 (30%), Positives = 96/220 (43%), Gaps = 37/220 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM--GVRDIAAGKDVKETIVKEIPSAKVDAM 87
            G  A+VTGA+ GIG   A  LA  G  V +  G    AA + ++E    E    K   +
Sbjct: 5   DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI---ESNGGKAFLI 61

Query: 88  ELDLSSLASVRNFASEYN------IQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN 139
           E DL+S+  V+    +        +   +++IL+NNAGI   GT    +++  +   A N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
               F L    L  ++        EGR+IN+SS   RL               G+ G  A
Sbjct: 122 IKAPFFLIQQTLPLLR-------AEGRVINISSAEVRL---------------GFTGSIA 159

Query: 200 YSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI 239
           Y  SK A       LA+ L E G  IT N++ PG   T+I
Sbjct: 160 YGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 57/217 (26%), Positives = 83/217 (38%), Gaps = 31/217 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--M 87
           SG  A+VTG  +GIG  TA   A  G  VV+  RD A G    E  V  I  A  +A  +
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG----EETVALIREAGGEALFV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHF 144
             D++  A V+    +    + +L+   NNAGI      L   S+   +     N  G +
Sbjct: 62  ACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L     +  M        G G I+N +S               +           Y+ SK
Sbjct: 122 LCMKYQIPLMLAQ-----GGGAIVNTAS---------------VAGLGAAPKMSIYAASK 161

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A I      A    + G+ +  N+V P  I T++ R
Sbjct: 162 HAVIGLTKSAAIEYAKKGIRV--NAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 7e-10
 Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 26/217 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG + GIG   A+     G  V++  R   A  D  E +       +  A+  
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA---YGECIAIPA 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLT 147
           DLSS   +    +    +  +L++L+NNAG   G P     +   +     N    F LT
Sbjct: 62  DLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLT 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             LL  ++  A  +    R+IN+ S         GI        SG   + +Y  SK A 
Sbjct: 122 QALLPLLRAAA-TAENPARVINIGSI-------AGIVV------SGLENY-SYGASKAA- 165

Query: 208 ILHANELARRLKEDGVD--ITANSVHPGAIATNIIRH 242
            +H  +L R+L ++     IT N++ PG   + +   
Sbjct: 166 -VH--QLTRKLAKELAGEHITVNAIAPGRFPSKMTAF 199

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 7e-10
 Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 41/218 (18%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG TA+VTG + G+G + A  L   G  VV+  R     ++        + +  +DA+
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA----HLEALGIDAL 64

Query: 88  EL--DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDN--------IELQF 136
            +  D++  A +   A E   +   ++IL+NNAG   G P   ++D+        + L  
Sbjct: 65  WIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAP---AEDHPVEAWDKVMNL-- 119

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYN 195
             N  G FLL+      + K +    G GRIINV+S  G  L  +          P    
Sbjct: 120 --NVRGLFLLSQ----AVAKRSMIPRGYGRIINVASVAG--LGGN----------PPEVM 161

Query: 196 GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG 233
              AY+ SK A I     LA      G  I  N++ PG
Sbjct: 162 DTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPG 197

Length = 259

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 43/218 (19%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMEL 89
           G  A+VTGA +G+G   A  LA  G  +V      A   +  ET  + E    +  ++  
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVG-----AGRSEPSETQQQVEALGRRFLSLTA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           DLS + +++        +   ++IL+NNAGI+       +     +F+       +  NL
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHIDILVNNAGII-------RRADAEEFSEKDWDDVMNVNL 112

Query: 150 -----LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
                L     K   K G  G+IIN++S    L++  GIR      PS       Y+ SK
Sbjct: 113 KSVFFLTQAAAKHFLKQGRGGKIINIAS---MLSFQGGIRV-----PS-------YTASK 157

Query: 205 --LANI--LHANELARRLKEDGVDITANSVHPGAIATN 238
             +A +  L ANE A +       I  N++ PG +ATN
Sbjct: 158 HAVAGLTKLLANEWAAK------GINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 35/212 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A+VTG   GIG   A  LA  G  V   V D+   +  KET  KEI  A  K  A +LD
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVA--VADLNE-ETAKETA-KEINQAGGKAVAYKLD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           +S    V +   +   +    ++++NNAG+   TP + ++++ ++  +  N  G      
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLF--- 114

Query: 149 LLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                ++  AR   K G  G+IIN +S    +A HE           G     AYS +K 
Sbjct: 115 ----GIQAAARQFKKQGHGGKIINAAS----IAGHE-----------GNPILSAYSSTKF 155

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
           A        A+ L   G  IT N+  PG + T
Sbjct: 156 AVRGLTQTAAQELAPKG--ITVNAYCPGIVKT 185

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 32/223 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           GL A+VTG  SG+G  T   L  +G  VV+     + G    ET+ K         + +D
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG----ETVAKLGD--NCRFVPVD 55

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI------ELQFA--TNHLG 142
           ++S   V+   +    +  +L+I++N AGI       +K           Q     N +G
Sbjct: 56  VTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
            F +  L    M K     GGE G IIN +S    +A  EG             G  AYS
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTAS----VAAFEGQI-----------GQAAYS 160

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
            SK   +     +AR L   G  I   ++ PG   T ++    
Sbjct: 161 ASKGGIVGMTLPIARDLAPQG--IRVVTIAPGLFDTPLLAGLP 201

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 12/142 (8%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           IVTG + GIG    R     G  VV   R  AAG+ ++  + +  P +    +  D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTKE 71

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLTNLL 150
             ++   S    +  +++ L+NNAG    P   + +    +F      N + +FL +   
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  ++K+      +G IIN+SS
Sbjct: 131 LPHLRKS------QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 35/214 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG  +G+G   A  LA  G  +++         + +  I KE    KV  +++D
Sbjct: 15  GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVD 71

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD-NIELQFATNHLGHFLLTN 148
           L+   S      E   +  +++IL+NNAG I   P +  KD +       N    + L+ 
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--LA 206
            +   M K      G G+IIN++S    L++  G                AY+ SK  +A
Sbjct: 132 AVAKVMAKQ-----GSGKIINIAS---MLSFQGGKFVP------------AYTASKHGVA 171

Query: 207 NILH--ANELARRLKEDGVDITANSVHPGAIATN 238
            +    ANELA        +I  N++ PG I T 
Sbjct: 172 GLTKAFANELAAY------NIQVNAIAPGYIKTA 199

Length = 258

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 39/224 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   ++TGA+ GIG   A   A  G H+ +  RD  A + +   +        V    LD
Sbjct: 7   GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKDNIELQ-----FATNHLGHF 144
           LSS  +    A+E       ++IL+NNAG I G       D+++       +     G+ 
Sbjct: 66  LSSPEAREQLAAEAG----DIDILVNNAGAIPGGGL----DDVDDAAWRAGWELKVFGYI 117

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            LT L    MK  AR   G G I+NV          E    D I   +G     A++++ 
Sbjct: 118 DLTRLAYPRMK--AR---GSGVIVNVIGAA-----GENPDADYICGSAGNAALMAFTRA- 166

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 248
                    L  +  +DGV +    V+PG +AT+  R  +L + 
Sbjct: 167 ---------LGGKSLDDGVRVVG--VNPGPVATD--RMLTLLKG 197

Length = 259

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 38/214 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
             ++TGA++G+G  TAR  A RG  VV+    +A G++  E +  EI +A  +A+ +  D
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVL----LARGEEGLEALAAEIRAAGGEALAVVAD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++   +V+  A     +   ++  +NNA + +  PF  ++ +         +LG    T 
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
             L  M+   R     G II V S    LAY   I               AY  +K    
Sbjct: 126 AALRHMRPRDR-----GAIIQVGSA---LAY-RSIPLQS-----------AYCAAK---- 161

Query: 209 LHA-----NELARRLKEDGVDITANSVHPGAIAT 237
            HA     + L   L  DG  ++   V P A+ T
Sbjct: 162 -HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 22/155 (14%)

Query: 34  AIVTGATSGIGTETARVLALR----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            +VTGA+ G G   A+ LA      G  +V+  R+  A + +K  I  E    +V  + L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 90  DLSSLASVRNF--ASEYNIQHHQLN--ILINNAGIMGTPFMLSK--------DNIELQFA 137
           DL + A +     A     +   L   +LINNAG +G    +SK          ++  +A
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGD---VSKGFVDLSDSTQVQNYWA 119

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N      LT+ +   +K      G    ++N+SS
Sbjct: 120 LNLTSMLCLTSSV---LKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 61/211 (28%), Positives = 84/211 (39%), Gaps = 35/211 (16%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
           AIVTG  +GIG   A  LA  G  VV  + D+ +  +  E +   I  A  +   +E ++
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVV--IADLKS--EGAEAVAAAIQQAGGQAIGLECNV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLT 147
           +S   +         Q   + IL+NNAG  G P        E  F      N    F L+
Sbjct: 58  TSEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA- 206
            L    M+K      G G I+N+SS                N         AY  SK A 
Sbjct: 117 QLCAPHMQKA-----GGGAILNISS------------MSSEN--KNVR-IAAYGSSKAAV 156

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
           N +  N LA  L   G+ +  N+V PGA+ T
Sbjct: 157 NHMTRN-LAFDLGPKGIRV--NAVAPGAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 34/213 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGA  G+G   A   A  G  V++  R  +   +V E I      A V A   D
Sbjct: 10  DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA--D 67

Query: 91  LSSLASVRNFASEYNIQHHQLNILINN-AGIMGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           L+   +    A +      +L+I++NN  G M  P +  S  ++   F  N      LT 
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA-- 206
             +  M + +    G G +IN+SS   RLA                 GF AY  +K A  
Sbjct: 128 AAVPLMLEHS----GGGSVINISSTMGRLAGR---------------GFAAYGTAKAALA 168

Query: 207 --NILHANELARRLKEDGVDITANSVHPGAIAT 237
               L A +L  R       I  N++ PG+I T
Sbjct: 169 HYTRLAALDLCPR-------IRVNAIAPGSILT 194

Length = 263

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 34  AIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            ++TGA  G IG E  + L   G  V +     +         +     A    + +   
Sbjct: 1   VLITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVLIVVPF 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN---IELQFATNHLGHFLLTNL 149
           +  S ++  +     +  +N L      +  PF    +    I    + + + H ++   
Sbjct: 61  NQGSKQDVEALAIGIYDTVNGLGW-DLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLTN 119

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRL--AYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
           LL               ++ +  +         + I     N  + +    AYS+SKL  
Sbjct: 120 LLRPK-----------GLVKIQKQLRGQETRPAQVILPFSPNHGT-FGDDGAYSESKLHL 167

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
               N  A      G D+T    H G    
Sbjct: 168 ETLFNRWASESW--GNDLTVCGAHIGWTRG 195

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA+ G G         RG  VV   RD A   D+ E         ++  + LD++  A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRA 62

Query: 96  SVRNFASEYNIQHH-QLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 152
           +V   A E  ++H  +L+I++NNAG      +  +++     Q  TN  G   +T  +L 
Sbjct: 63  AVFA-AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLP 121

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
            +    R+    G II +SS G       GI        S +     Y  SK A    + 
Sbjct: 122 YL----REQRS-GHIIQISSIG-------GI--------SAFPMSGIYHASKWALEGMSE 161

Query: 213 ELARRLKEDGVDITANSVHPGAIATN 238
            LA+ + E G+ +T   V PG  +T+
Sbjct: 162 ALAQEVAEFGIKVTL--VEPGGYSTD 185

Length = 275

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 37/212 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG   GIG +        G  VV    D   G D  E    E P+        D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA---EGPNLFFVHG--D 55

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++    V+        +  ++++L+NNA     G    L  +  +   + N  G + L+ 
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 149 LLLDTMKKTARKSGGEGRIINV-SSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--L 205
              D + K       +GRIIN+ S+   +            ++P       AY+ SK  L
Sbjct: 116 YCRDELIK------NKGRIINIASTRAFQ------------SEPDS----EAYAASKGGL 153

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
             + HA  LA  L   G DI  N + PG I T
Sbjct: 154 VALTHA--LAMSL---GPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 39/222 (17%)

Query: 31  GLTAIVTGAT--SGIGTETARVLALRGVHVVM-----GVRDIAAGKDVKETIV--KEI-- 79
              A+VTGA+  +GIG    R LA +G+ +         + +  G   KE ++  +EI  
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 80  PSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFA 137
              + + ME+DLS   +        + +    +ILINNA          L+ + ++  +A
Sbjct: 65  YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYA 124

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            N     LL++      K+   K+G  GRIIN++S G  L    G   D++         
Sbjct: 125 VNVRATMLLSSAF---AKQYDGKAG--GRIINLTS-GQSL----GPMPDEL--------- 165

Query: 198 RAYSQSKLANILHA--NELARRLKEDGVDITANSVHPGAIAT 237
            AY+ +K A  + A    LA  L E G  IT N+V+PG   T
Sbjct: 166 -AYAATKGA--IEAFTKSLAPELAEKG--ITVNAVNPGPTDT 202

Length = 256

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 42/204 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAME 88
                ++TGA+ GIG   A  LA  G  +++  R+        E +   +P   +   + 
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVV 59

Query: 89  LDLSS---LASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHL 141
            DL+S     +V   A     +   +N+LINNAG+    F L      + IE   A N  
Sbjct: 60  ADLTSEAGREAVLARAR----EMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLT 113

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
               LT  LL  ++           ++NV S            F  I    GY G+ +Y 
Sbjct: 114 APMQLTRALLPLLRAQ-----PSAMVVNVGST-----------FGSI----GYPGYASYC 153

Query: 202 QSKLANILH--ANELARRLKEDGV 223
            SK A  L   +  L R L + GV
Sbjct: 154 ASKFA--LRGFSEALRRELADTGV 175

Length = 263

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 29/93 (31%), Positives = 46/93 (49%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I   G  A+VTG +SGIG  T  +L   G  V +  RD       +  + ++ P A++ A
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
              D+   A V  FA+    +   +++L+NNAG
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 40/160 (25%), Positives = 57/160 (35%), Gaps = 24/160 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TG    +G   A+ LA  G  V +  R+    + V   I      A   A++ 
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--AVKA 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG-----------------IMGTPFMLSKDNI 132
           D+    S+     +        +ILIN AG                    T F L ++  
Sbjct: 67  DVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           E  F  N LG  L T +    M          G IIN+SS
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVG-----RKGGNIINISS 161

Length = 278

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 8e-09
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 28/208 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+V GA+SGIG  TA  LA  G  V +G R +   +++ + I  +   A   A  LD++
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPLDVT 69

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              SV++F ++      ++ +L++ AG    G    +S +  E Q   + +G   L   +
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAV 129

Query: 151 LDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           L  M +  R     G +I V S+   R   H G                AY  +K     
Sbjct: 130 LPGMIERRR-----GDLIFVGSDVALRQRPHMG----------------AYGAAKAGLEA 168

Query: 210 HANELARRLKEDGVDITANSVHPGAIAT 237
               L  +++ +G  + A+ VHPG   T
Sbjct: 169 MVTNL--QMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 8e-09
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A++TG  SGIG  TAR LA  G  VV+G  D  AGK   +    E+    V     
Sbjct: 6   AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----EVGGLFVPT--- 58

Query: 90  DLSSLASVRN-FASEYNIQHHQLNILINNAGI 120
           D++   +V   F +     +  ++I  NNAGI
Sbjct: 59  DVTDEDAVNALFDTAAE-TYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G T ++TGA   IG+   + +   G  V+    D  A  ++ E++ KE  S K+  +EL
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL-QFATN---HLGHFL 145
           D++   S+  F S+   ++ +++  +N A      +     ++ L  F  N   HLG   
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSF 122

Query: 146 LTNLLLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGI---RFDKINDPSGYNGFRAY 200
           L        ++ A+  K  G G ++N+SS         G+   +F+     S  +    Y
Sbjct: 123 L------FSQQFAKYFKKQGGGNLVNISSI-------YGVVAPKFEIYEGTSMTSPVE-Y 168

Query: 201 SQSKLANILHANE-LARRLKEDGVDITANSVHPGAIATN 238
           +  K A I+H  + LA+  K+  + +  N V PG I  N
Sbjct: 169 AAIK-AGIIHLTKYLAKYFKDSNIRV--NCVSPGGILDN 204

Length = 256

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 39/212 (18%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA+VTGA  GIG   AR     G  V+    D AA           +  A+   +  DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF----ADALGDARFVPVACDLT 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFL 145
             AS+    +    +   +++L+ NAG          TP     DN     A N    +L
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-----ALNLEAAYL 114

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
               +L+ M K +R     G ++N+ S               +N  +   G  AYS +K 
Sbjct: 115 CVEAVLEGMLKRSR-----GAVVNIGS---------------VNGMAAL-GHPAYSAAKA 153

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
             I +   LA      G  I AN+V PG + T
Sbjct: 154 GLIHYTKLLAVEYGRFG--IRANAVAPGTVKT 183

Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG T G+G   AR  A RG   ++   R+   G+     +  E   AK   ++ DLS
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL--EALGAKAVFVQADLS 66

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
            +   R   +  +    +L+ L+N AG+   GT    S +  +  FA N    F L    
Sbjct: 67  DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  M    R+   EG I+N+ S
Sbjct: 127 IKLM----RRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 58/222 (26%), Positives = 85/222 (38%), Gaps = 46/222 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SGIG  TA +L   G  V+        G D++E  V             DLS
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI--------GIDLREADVIA-----------DLS 41

Query: 93  SLASVRN-FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
           +        A         L+ L+N AG+ GT          L    N+ G   L   LL
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALMEALL 95

Query: 152 DTMKKTARKSGGEGRIINVSS------EGHRLAYHEGI------RFDKINDPSGYNGFRA 199
             ++K     G     + VSS         +L   + +      R   + + +G  G+ A
Sbjct: 96  PRLRK-----GHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLA 150

Query: 200 YSQSKLANILHANELARR-LKEDGVDITANSVHPGAIATNII 240
           Y+ SK A  +     A   L   GV +  N+V PG + T I+
Sbjct: 151 YAGSKEALTVWTRRRAATWLYGAGVRV--NTVAPGPVETPIL 190

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 37/219 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G  A+VTGA+ GIG   A+ LA  G  V +        K+  E  V EI S    A  + 
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSIG 60

Query: 90  -DLSSLASVRNFASEYNIQ------HHQLNILINNAGIMGTPFM--LSKDNIELQFATNH 140
            +L SL  V    S  + +        + +ILINNAGI    F+   ++   +   + N 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
              F +    L  ++  +       RIIN+SS   R++  +               F AY
Sbjct: 121 KAPFFIIQQALSRLRDNS-------RIINISSAATRISLPD---------------FIAY 158

Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI 239
           S +K A       LA++L   G  IT N++ PG I T++
Sbjct: 159 SMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 61/224 (27%), Positives = 87/224 (38%), Gaps = 31/224 (13%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
           V D  D  G  A++TGA++GIG   A      G  V +  R + A + + + I       
Sbjct: 1   VLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGG 58

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA--TNH 140
           KV  +  D+S    V +   +   +   ++I + NAGI+    ML     E Q    TN 
Sbjct: 59  KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNV 118

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGR----IINVSSEGHRLAYHEGIRFDKINDPSGYNG 196
            G FL       T +  A+    +G+    I   S  GH            IN P   + 
Sbjct: 119 TGVFL-------TAQAAAKAMVKQGQGGVIINTASMSGH-----------IINVPQQVS- 159

Query: 197 FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
              Y  SK A I     +A  L      I  NSV PG I T ++
Sbjct: 160 --HYCASKAAVIHLTKAMAVELAPH--KIRVNSVSPGYILTELV 199

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 40/236 (16%)

Query: 6   FNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI 65
           +   GP+     STA+  +   + S     +TG   GIG   A   A  G  +++  RD 
Sbjct: 250 YGGSGPA-----STAQAPSPLAE-SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA 303

Query: 66  AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF 125
              K + E +  E  S +      D++  A+V +  ++   +  +L++L+NNAG +   F
Sbjct: 304 EGAKKLAEALGDEHLSVQA-----DITDEAAVESAFAQIQARWGRLDVLVNNAG-IAEVF 357

Query: 126 MLSKD----NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
             S +    +    +  N  G F          +  AR     G I+N+ S         
Sbjct: 358 KPSLEQSAEDFTRVYDVNLSGAFA-------CARAAARLMSQGGVIVNLGS--------- 401

Query: 182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
                 I          AY  SK A  + +  LA      G  I  N+V PG I T
Sbjct: 402 ------IASLLALPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIET 449

Length = 520

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 36/210 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMEL 89
           G  A++T A  GIG   A   A  G +V+          D+ E  +KE+     +    L
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVI--------ATDINEEKLKELERGPGITTRVL 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++    V   A E      ++++L N AG +  G+      D+ +     N    +L+ 
Sbjct: 54  DVTDKEQVAALAKEEG----RIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMI 109

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +L  M   ARK    G IIN+SS                +   G      YS +K A 
Sbjct: 110 KAVLPKM--LARKD---GSIINMSSVA--------------SSIKGVPNRFVYSTTKAAV 150

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           I     +A    + G  I  N++ PG + T
Sbjct: 151 IGLTKSVAADFAQQG--IRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 61/215 (28%), Positives = 88/215 (40%), Gaps = 26/215 (12%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDA 86
           D  G   ++TG ++G+G   A         VV+  R D     DV E I K     +  A
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIA 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTP-FMLSKDNIELQFATNHLGHF 144
           ++ D++  + V N       +   L+++INNAGI    P   +S ++      TN  G F
Sbjct: 62  VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L +   +    +   K    G IIN+SS       HE I +     P     F  Y+ SK
Sbjct: 122 LGSREAIKYFVEHDIK----GNIINMSS------VHEQIPW-----PL----FVHYAASK 162

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNI 239
               L    LA      G  I  N++ PGAI T I
Sbjct: 163 GGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPI 195

Length = 261

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVD 85
           D +G  A++TGA SG G   AR+ A  G+ +V+   D+    D  +  V E+ +  A+V 
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLA--DVQQ--DALDRAVAELRAQGAEVL 58

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGH 143
            +  D+S  A V   A     +   +++L NNAG+     +      + +     N  G 
Sbjct: 59  GVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGV 118

Query: 144 F----LLTNLLLDTMKKTARKSGGEGRIINVSS 172
                  T L+L   +K       EG I+N +S
Sbjct: 119 IHGVRAFTPLMLAAAEKDP---AYEGHIVNTAS 148

Length = 287

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVD 85
           D  G TA+VTG++ GIG +TA++LA  G HVV+  R  A        +V EI +A  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVAEIEAAGGRAS 59

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNA-GIM----------------------- 121
           A+  DL+   SV         +   L+ L+ NA G M                       
Sbjct: 60  AVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARA 119

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGE 164
             P M +   +   F T+H  HF+ T   +   +  AR K  GE
Sbjct: 120 ALPLMPAGSRV--VFVTSHQAHFIPTVKTMPEYEPVARSKRAGE 161

Length = 248

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 27/213 (12%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D +G  AI+TG  +G+G   A  LA  G  +V GV  +A   + +  +  E    K   +
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIV-GV-GVAEAPETQAQV--EALGRKFHFI 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFL 145
             DL     + +  S+       ++ILINNAGI+    +L     + +     N    F 
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           L+      + K   K G  G+IIN++S    L++  GIR      PS       Y+ SK 
Sbjct: 121 LSQ----AVAKQFVKQGNGGKIINIAS---MLSFQGGIRV-----PS-------YTASKS 161

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATN 238
           A +     LA  L +  +++  N++ PG +AT+
Sbjct: 162 AVMGLTRALATELSQYNINV--NAIAPGYMATD 192

Length = 251

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 69/249 (27%), Positives = 96/249 (38%), Gaps = 53/249 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AI+TGA+SGIG   A++ A  G  VV+G R     +   + +V EI +   +A+ L
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR----RQAELDQLVAEIRAEGGEAVAL 60

Query: 90  -----------DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQ 135
                       L +LA V  F          L+I  NNAG +G       +S +     
Sbjct: 61  AGDVRDEAYAKALVALA-VERFGG--------LDIAFNNAGTLGEMGPVAEMSLEGWRET 111

Query: 136 FATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGY 194
            ATN    FL     +  M       GG G +I  S+  GH                 G+
Sbjct: 112 LATNLTSAFLGAKHQIPAM----LARGG-GSLIFTSTFVGHTA---------------GF 151

Query: 195 NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH---NSLFRSMNT 251
            G  AY+ SK   I     LA      G  I  N++ PG   T + R         +   
Sbjct: 152 PGMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVA 209

Query: 252 ILHALPGIA 260
            LHAL  +A
Sbjct: 210 GLHALKRMA 218

Length = 254

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 39/213 (18%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AIVTG + G+G   A  L   G+ V+     +A  +      +      ++  +ELDLS 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVL----GVARSRH---PSLAAAAGERLAEVELDLSD 56

Query: 94  LASVRNFASEYNIQH----HQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLL 146
            A+   + +   +          +LINNAG    +G    L    I      N     +L
Sbjct: 57  AAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLML 116

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T  L       A +     RI+++SS   R A               Y G+  Y  +K A
Sbjct: 117 TAALAQAASDAAER-----RILHISSGAARNA---------------YAGWSVYCATKAA 156

Query: 207 NILHANELARRLKEDGVD-ITANSVHPGAIATN 238
              H    AR +  D    +   S+ PG + T 
Sbjct: 157 LDHH----ARAVALDANRALRIVSLAPGVVDTG 185

Length = 243

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 24/210 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA++TGA+ GIG   AR     G  V++  RD  A    ++ + +E P  +V  +  
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAA 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D+S     R            L+IL+NNAG       +  ++D     F TN    F L+
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELS 127

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 +K+ A  +     I+N+ S         G+   +   P        Y  +K A 
Sbjct: 128 RYAHPLLKQHASSA-----IVNIGSVS-------GLTHVRSGAP--------YGMTKAAL 167

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +     LA    EDG  I  N+V P  I T
Sbjct: 168 LQMTRNLAVEWAEDG--IRVNAVAPWYIRT 195

Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 51.8 bits (124), Expect = 6e-08
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 29/213 (13%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            D SG  A+VTGA+ GIG E AR+L  +G   ++G+      K   E +  E+   +V  
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQG--AIVGLHGTRVEK--LEALAAEL-GERVKI 56

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 144
              +LS    V+    +       ++IL+NNAGI   G    +S ++ +     N    F
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            LT  L   M +  R+    GRIIN++S               +   +G  G   Y  SK
Sbjct: 117 RLTRELTHPMMR--RRY---GRIINITS---------------VVGVTGNPGQANYCASK 156

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIAT 237
              I  +  LA+ +     ++T N V PG I +
Sbjct: 157 AGMIGFSKSLAQEIATR--NVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 54/220 (24%), Positives = 88/220 (40%), Gaps = 52/220 (23%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--ETIVKEIPSA---KVDAMELD 90
           VTGA  GIG E A   A  G  V++       G+  +  E +  EI +A   +   + LD
Sbjct: 17  VTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70

Query: 91  LSSLASVRNF---ASEYNIQHHQLNILINNAGIMG--TPF-MLSKDNIELQFATNHLGHF 144
           L + A+ +N+   A     Q  +L+ +++NAG++G   P      +  +     N    F
Sbjct: 71  LLT-ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATF 129

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           +LT  LL  + K+         ++  SS  G                  G   + AY+ S
Sbjct: 130 MLTQALLPLLLKSP-----AASLVFTSSSVGR----------------QGRANWGAYAVS 168

Query: 204 KLA-----NILHANELARRLKEDGVDITANSVHPGAIATN 238
           K A      +L A+E        G ++  N ++PG   T 
Sbjct: 169 KFATEGMMQVL-ADEY------QGTNLRVNCINPGGTRTA 201

Length = 247

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 26/207 (12%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSS 93
           +VTGA+ GIG E A   A  G  V++  R+    + V + I +E     +   ++L   +
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNLL 150
             + +  A    + + +L+ +++NAG++G    LS+ N ++       N    F+LT  L
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQAL 127

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  + K+       G ++  SS   R                   G  AY+ SK A    
Sbjct: 128 LPLLLKSD-----AGSLVFTSSSVGR-------------QGRANWG--AYAVSKFATEGL 167

Query: 211 ANELARRLKEDGVDITANSVHPGAIAT 237
              LA   +    ++  N ++PG   T
Sbjct: 168 XQVLADEYQ--QRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 33/210 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TG +SG G   A+     G  VV  VR  AA  D +          +  A  LD++
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-----PDRALARLLDVT 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++    ++       +++L+NNAG    G         +  QF  N  G   +T  +
Sbjct: 61  DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA--NI 208
           L  M+  AR+    G I+N++S G  +               GY     Y  SK A   I
Sbjct: 121 LPGMR--ARRR---GHIVNITSMGGLIT----------MPGIGY-----YCGSKFALEGI 160

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATN 238
             +  LA+ +   G+ +TA  V PG+  T+
Sbjct: 161 SES--LAKEVAPFGIHVTA--VEPGSFRTD 186

Length = 277

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 42/215 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG T GIG  T   L   G  VV              T  +  P    + +E 
Sbjct: 8   AGKRALVTGGTKGIGAATVARLLEAGARVV--------------TTARSRPDDLPEGVEF 53

Query: 90  ---DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FM-LSKDNIELQFATNHLG 142
              DL++       A     +   ++IL++  G    P   F  L+ +  + +   N L 
Sbjct: 54  VAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA 113

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              L   LL  M   AR SG    II+V+S   RL   E                 AY+ 
Sbjct: 114 AVRLDRALLPGM--IARGSGV---IIHVTSIQRRLPLPE--------------STTAYAA 154

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           +K A   ++  L++ +   GV +  N+V PG I T
Sbjct: 155 AKAALSTYSKSLSKEVAPKGVRV--NTVSPGWIET 187

Length = 260

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 47/155 (30%), Positives = 64/155 (41%), Gaps = 16/155 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSA- 82
           G   IVTGA  GIG   A   A  G  VV  V DI       A+G    + +V EI +A 
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 83  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN-H 140
            +  A   D++      N           L++L+NNAGI+    + +    E       H
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVH 123

Query: 141 L-GHFLLTNLLLDTMKKTARKSGG--EGRIINVSS 172
           L GHF          +  + K+G   + RIIN SS
Sbjct: 124 LKGHFATLRHAAAYWRAES-KAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 32/213 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A++TG T GIG   A      G  V V+        K+++E          V  ++
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--------GVFTIK 57

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PF-MLSKDNIELQFATNHLGHFLL 146
            D+ +   V+        +  ++++L+NNAGIM   PF    ++        N  G    
Sbjct: 58  CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYT 117

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T   L  +K +       G I+N++S        EG  F              Y+ +K  
Sbjct: 118 TYEFLPLLKLSKN-----GAIVNIASNAGIGTAAEGTTF--------------YAITKAG 158

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
            I+    LA  L + G  I  N+V PG + T++
Sbjct: 159 IIILTRRLAFELGKYG--IRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 13/155 (8%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D +G  A+VTG++ GIG   A  LA  G  V++  RD A      E++  +       A+
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHAL 64

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
             D++   +VR     +  +   ++IL+NNAG      M  +  +E  F  +     L T
Sbjct: 65  AFDVTDHDAVRAAIDAFEAEIGPIDILVNNAG------MQFRTPLE-DFPADAFERLLRT 117

Query: 148 NL--LLDTMKKTARK--SGGEGRIINVSSEGHRLA 178
           N+  +    +  AR   + G G+IIN++S    LA
Sbjct: 118 NISSVFYVGQAVARHMIARGAGKIINIASVQSALA 152

Length = 255

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELD 90
           L   +TGA+SGIG   AR  A +G    +G+  +A   D  +     +P +A+V     D
Sbjct: 3   LKVFITGASSGIGQALAREYARQG--ATLGL--VARRTDALQAFAARLPKAARVSVYAAD 58

Query: 91  LSSLASVRNFASEYNIQHHQL-NILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLL 146
           +    ++   A+++ I  H L +++I NAGI     T              TN+ G    
Sbjct: 59  VRDADALAAAAADF-IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVAT 117

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
               +  M     ++   G ++ ++S         G+R        G  G  AYS SK A
Sbjct: 118 FQPFIAPM-----RAARRGTLVGIASVA-------GVR--------GLPGAGAYSASKAA 157

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
            I +   L   L+  GV +   ++ PG I T +  HN
Sbjct: 158 AIKYLESLRVELRPAGVRVV--TIAPGYIRTPMTAHN 192

Length = 257

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 55/211 (26%), Positives = 81/211 (38%), Gaps = 30/211 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
             TAIVTG   GIG  T R  A  G  V   V D+    +  E +  +I +      A  
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKV--AVFDLNR--EAAEKVAADIRAKGGNAQAFA 58

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLL 146
            D++   SV    +        +++L+NNAG    G          E   A N  G   +
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            + +L  M +      G GRI+N++S+  R+               G +G   Y+  K  
Sbjct: 119 HHAVLPGMVER-----GAGRIVNIASDAARV---------------GSSGEAVYAACKGG 158

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
            +  +  +AR     G  IT N V PG   T
Sbjct: 159 LVAFSKTMAREHARHG--ITVNVVCPGPTDT 187

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 25/211 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG   GIG   AR LA  G  + +    D       ++ +       +V     D+
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLLT 147
           + L++             +++ L+NNAG+     G    L+ ++ +   A N  G F LT
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 148 NLLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
             +   M  +   +      I+ VSS    +      R +             Y  SK  
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN--RGE-------------YCISKAG 166

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
             + A   A RL E+G  I    V PG I T
Sbjct: 167 LSMAAQLFAARLAEEG--IGVYEVRPGLIKT 195

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 31/209 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA++TG TSGIG ETAR     G  V +  RD A+ +  +  +           +  D
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRAD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFML-SKDNIELQFATNHLGHFLLTN 148
              +A+ +  A        +L+ +  NAG+    P     +   +  F TN  G + L  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            LL  +   A        ++N S   H            I  P+       Y+ SK A +
Sbjct: 121 ALLPLLANPA------SIVLNGSINAH------------IGMPNS----SVYAASKAALL 158

Query: 209 LHANELARRLKEDGVDITANSVHPGAIAT 237
             A  L+  L   G+ +  N+V PG + T
Sbjct: 159 SLAKTLSGELLPRGIRV--NAVSPGPVQT 185

Length = 249

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 44/218 (20%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAK 83
           G   +VTGA  G+G   A   A RG  VV  V D+              + +V EI +A 
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVV--VNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 84  VDAMELDLSSLASVRNFAS--EYNIQHHQ-LNILINNAGIM--GTPFMLSKDNIELQFAT 138
             A    +++  SV +     +  I     ++IL+NNAGI+   +   +S+++ +L    
Sbjct: 63  GKA----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRV 118

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI--RFDKINDPSGYNG 196
           +  G F +T      M+K        GRIIN SS         G+   F + N       
Sbjct: 119 HLKGSFKVTRAAWPYMRKQ-----KFGRIINTSSAA-------GLYGNFGQAN------- 159

Query: 197 FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA 234
              YS +KL  +  +N LA    +    IT N++ P A
Sbjct: 160 ---YSAAKLGLLGLSNTLAIEGAKYN--ITCNTIAPAA 192

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 64/237 (27%), Positives = 88/237 (37%), Gaps = 44/237 (18%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
             +G   +V G + GIG    R     G +V       A  KD  E + +E  +  V   
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRF---TYAGSKDAAERLAQETGATAVQTD 59

Query: 88  ELDLSSLAS-VRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN-HLGH 143
             D  ++   VR   +        L+IL+ NAGI   G    L  D+I+  F  N H  +
Sbjct: 60  SADRDAVIDVVRKSGA--------LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPY 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
                       + AR+    GRII + S  G R+                  G  AY+ 
Sbjct: 112 HASV--------EAARQMPEGGRIIIIGSVNGDRMP---------------VAGMAAYAA 148

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGI 259
           SK A    A  LAR     G  IT N V PG I T+    N     M  ++H+   I
Sbjct: 149 SKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDA---NPANGPMKDMMHSFMAI 200

Length = 237

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            D ++  G   IVTG +SGIG    + L   G +VV    DI  G    E          
Sbjct: 2   QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQHE---------N 50

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-----------TPFMLSKDNI 132
              +  D+SS   V +  +E   +  +++ L+NNAGI               + L++   
Sbjct: 51  YQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF 110

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE 173
           +  F  N  G FL++  +   M K       +G I+N+SSE
Sbjct: 111 DKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSE 146

Length = 266

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 49.5 bits (118), Expect = 6e-07
 Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA+VTGA SGIG E A  LA  G  V +   +      V + I K     K   + +D
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHF 144
           +++  +V     +   +   ++IL++NAGI          F   K       A +  G F
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQ----AIHVDGAF 120

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L T   L  M K  R     G +I + S
Sbjct: 121 LTTKAALKHMYKDDRG----GVVIYMGS 144

Length = 262

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 32/226 (14%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELDL 91
           A VTG   GIGT   + L   G  VV G          +   +++  +   D  A E ++
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGC---GPNSPRRVKWLEDQKALGFDFIASEGNV 62

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNL 149
               S +    +   +  ++++L+NNAGI        +++++      TN    F +T  
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQ 122

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           ++D M +      G GRIIN+SS               +N   G  G   YS +K     
Sbjct: 123 VIDGMVER-----GWGRIINISS---------------VNGQKGQFGQTNYSTAKAGIHG 162

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNI---IRHNSLFRSMNTI 252
               LA+ +   GV  T N+V PG I T++   IR + L + + TI
Sbjct: 163 FTMSLAQEVATKGV--TVNTVSPGYIGTDMVKAIRPDVLEKIVATI 206

Length = 246

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 34/230 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRG-----VHVVMGVRD-----IAAGKDVKETI-VKEI 79
           G  A +TGA  G G   A  LA  G     + +   + D     +A  +D+ ET  + E 
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 80  PSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFA 137
              KV A + D+  LA VR    +   Q  +L++++ NAG++  G  + LS++  +    
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLD 122

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            N  G +     ++  M    R +GG   II  SS               +       G 
Sbjct: 123 INLTGVWRTCKAVVPHM--IERGNGGS--IIITSS---------------VAGLKALPGL 163

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR 247
             Y+ +K   +     LA  L E G  I  NS+HP ++ T +I   ++  
Sbjct: 164 AHYAAAKHGLVGLTKTLANELAEYG--IRVNSIHPYSVDTPMIAPEAMRE 211

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 54/212 (25%), Positives = 77/212 (36%), Gaps = 32/212 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   +VTGA  GIG   A  LA  G  V++  R      +V   I+             
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAA--GDAAHVHTA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQFATNHLGHFLL 146
           DL + A  +        +  ++++LINN G  I   P+    ++ IE +   +       
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              +L  M    R+    G I+NVSS   R  Y                    YS +K  
Sbjct: 120 CRAVLPHM--LERQQ---GVIVNVSSIATRGIYRI-----------------PYSAAKGG 157

Query: 207 -NILHANELARRLKEDGVDITANSVHPGAIAT 237
            N L A+ LA     DG  I  N+V PG    
Sbjct: 158 VNALTAS-LAFEHARDG--IRVNAVAPGGTEA 186

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AIVTG + GIG      L   G +V+    +           +KE     VD  ++D+S+
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVI----NFD---------IKEPSYNDVDYFKVDVSN 55

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
              V         ++ +++IL+NNAGI   G    + +D  +     N  G FL++   +
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             M K       +G IIN++S
Sbjct: 116 PYMLKQ-----DKGVIINIAS 131

Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA SGIG  TA + A  G  V  G  DI         +  E+ +       LD++  A
Sbjct: 6   ITGAASGIGRATALLFAAEGWRV--GAYDINE--AGLAALAAELGAGNAWTGALDVTDRA 61

Query: 96  SVRN----FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           +       FA+       +L++L NNAGI  G PF  +  +  +     N  G     + 
Sbjct: 62  AWDAALADFAAA---TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHA 118

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L  +K T        R+IN SS
Sbjct: 119 ALPYLKATP-----GARVINTSS 136

Length = 260

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG  + IG   AR L   G  V +   D   G  V  ++       +   +  D
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNA 118
           ++  A++    +    +  +++IL+N A
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 13/141 (9%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--MELDLSS 93
           +TGA SG+G   A   A  G  + +   +   G    E  +K +  A  D      D+  
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGG----EETLKLLREAGGDGFYQRCDVRD 60

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 151
            + +   A     +   +++++NNAG+    F   LS ++ + Q A N +G        L
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 152 DTMKKTARKSGGEGRIINVSS 172
              K+        GRI+N++S
Sbjct: 121 PLFKRQ-----KSGRIVNIAS 136

Length = 270

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A +TG  +GIG   A+  A  G  V +  R     +   E I       +   ++ 
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA-TGGRAHPIQC 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG 119
           D+    +V     E   +  +++ILINNA 
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA  GIG   A+ L   G  V +   +    +   + + K+   A   A++ D+S 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVSD 62

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLLL 151
              V     +       LN+++NNAG+   TP   ++++  +  +  N  G         
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQ 122

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
           +  KK     G  G+IIN +S+    A   G       +P        YS +K A     
Sbjct: 123 EAFKKL----GHGGKIINATSQ----AGVVG-------NP----ELAVYSSTKFAVRGLT 163

Query: 212 NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGK 262
              AR L  +G  IT N+  PG + T +         M  I H +   AGK
Sbjct: 164 QTAARDLASEG--ITVNAYAPGIVKTPM---------MFDIAHQVGENAGK 203

Length = 256

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 39/224 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            I+TG + G+G   A  L  +G HV+     I+  ++ + T + E  ++ +    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVI----SISRTENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 94  LASVRNFASEYNIQHHQLNI----LINNAGIMGTPF----MLSKDNIELQFATNHLGHFL 145
           +  +    +E      + N+    LINNAG++  P         + +      N L   +
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMV-APIKPIEKAESEELITNVHLNLLAPMI 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           LT+     MK T      + R+IN+SS   +             +P  Y G+ AY  SK 
Sbjct: 119 LTSTF---MKHTKDWK-VDKRVINISSGAAK-------------NP--YFGWSAYCSSKA 159

Query: 206 ANILHANELA--RRLKEDGVDITANSVHPGAIATNI---IRHNS 244
              +    +A  +  +E  V I A    PG + TN+   IR +S
Sbjct: 160 GLDMFTQTVATEQEEEEYPVKIVA--FSPGVMDTNMQAQIRSSS 201

Length = 251

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 48/213 (22%), Positives = 77/213 (36%), Gaps = 36/213 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   +V+G   G+G   A   A  G  VV+  R      +V      EI      A+ +
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA----AEIDDLGRRALAV 59

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLG 142
             D++      N  +    +  +++ L+NNA  +  P M    + +          N LG
Sbjct: 60  PTDITDEDQCANLVALALERFGRVDALVNNAFRV--PSMKPLADADFAHWRAVIELNVLG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              LT      + ++       G I+ ++S   R   H   ++             AY  
Sbjct: 118 TLRLTQAFTPALAES------GGSIVMINSMVLR---HSQPKYG------------AYKM 156

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAI 235
           +K A +  +  LA  L   G  I  NSV PG I
Sbjct: 157 AKGALLAASQSLATELGPQG--IRVNSVAPGYI 187

Length = 258

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 41/225 (18%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
           + D     G  A+VTG  +G+G   A  LA  G  +V G+ +I    +  E +       
Sbjct: 2   ILDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIV-GI-NIVEPTETIEQV--TALGR 57

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG 142
           +  ++  DL  +  +         +   ++IL+NNAG++       +    ++F+     
Sbjct: 58  RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI-------RREDAIEFSEKDWD 110

Query: 143 HFLLTNL-----LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
             +  N+     +     K     G  G+IIN++S    L++  GIR      PS     
Sbjct: 111 DVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS---MLSFQGGIRV-----PS----- 157

Query: 198 RAYSQSKLANI----LHANELARRLKEDGVDITANSVHPGAIATN 238
             Y+ SK   +    L ANE A+       +I  N++ PG +ATN
Sbjct: 158 --YTASKSGVMGVTRLMANEWAKH------NINVNAIAPGYMATN 194

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA++TG+  GIG   A+     G  V +   ++ A +        EI  A   A+ LD
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AISLD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++  AS+    +    +   ++IL+NNA +  +     +++++ +  FA N  G   +  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFM-- 115

Query: 149 LLLDTMKKTARK---SGGEGRIINVSSEGHR 176
                M+  AR     G  G+IIN++S+  R
Sbjct: 116 -----MQAVARAMIAQGRGGKIINMASQAGR 141

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 64/226 (28%), Positives = 91/226 (40%), Gaps = 54/226 (23%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---IVKEIPSAKVDAM 87
           G  A++TG  SGIG   A + A  G  + +   D    +D  ET   + KE    K   +
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD--EHEDANETKQRVEKE--GVKCLLI 101

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--------LQFATN 139
             D+S  A  ++   E   +  +L+IL+NNA      F   + ++E          F TN
Sbjct: 102 PGDVSDEAFCKDAVEETVRELGRLDILVNNAA-----FQYPQQSLEDITAEQLDKTFKTN 156

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
              +F +T   L  +     K G    IIN  S               I    GY G   
Sbjct: 157 IYSYFHMTKAALPHL-----KQGSA--IINTGS---------------IT---GYEGNET 191

Query: 200 ---YSQSKLANILHA--NELARRLKEDGVDITANSVHPGAIATNII 240
              YS +K A  +HA    LA+ L + G  I  N+V PG I T +I
Sbjct: 192 LIDYSATKGA--IHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLI 233

Length = 290

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)

Query: 27  IDGSGL----TAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEI 79
           + G GL      +VT A  +GIG+ TAR     G  VV  + DI      +  + +  E+
Sbjct: 9   VPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVV--ISDIHERRLGETADELAAEL 66

Query: 80  PSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT 123
              +V+A+  D++S A V         +  +L++L+NNAG+ G 
Sbjct: 67  GLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQ 110

Length = 262

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 51/213 (23%), Positives = 73/213 (34%), Gaps = 42/213 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
            A+VTGA   IG   A  LA  G  VV+      A       +  E+ + +  A+ +  D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQ---RLKDELNALRNSAVLVQAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           LS  A+  +  +       + ++L+NNA           S+D     F  N    +LL  
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI- 117

Query: 149 LLLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-- 204
                 +  AR       G IIN+                         G+ AY  SK  
Sbjct: 118 ------QAFARRLAGSRNGSIINIID---------------AMTDRPLTGYFAYCMSKAA 156

Query: 205 LANI--LHANELARRLKEDGVDITANSVHPGAI 235
           L  +    A ELA         I  N + PG I
Sbjct: 157 LEGLTRSAALELAPN-------IRVNGIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 58/222 (26%), Positives = 87/222 (39%), Gaps = 42/222 (18%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           +V GA  GIG   AR +   G  V++   +    +   +T+ +      V   E+D+SS 
Sbjct: 6   VVIGA-GGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSR 61

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
            SV+  A         +  L++ AG+  +P   S+ + E     +  G    T L+L+  
Sbjct: 62  ESVKALA-ATAQTLGPVTGLVHTAGV--SP---SQASPEAILKVDLYG----TALVLEEF 111

Query: 155 KKTARKSGGEGRIINVSSEGHR-------------------LAYHEGIRFDKINDPSGYN 195
            K     GG G +I  S  GHR                   L     ++ D I D     
Sbjct: 112 GKVI-APGGAGVVIA-SQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDS---- 165

Query: 196 GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
              AY  +K AN L     A +  E G  I  NS+ PG I+T
Sbjct: 166 -LHAYQIAKRANALRVMAEAVKWGERGARI--NSISPGIIST 204

Length = 275

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 29/217 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           SG  A+VTG++ GIG   A  LA  G  + +   + A  +   E   +EI +   K  A+
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAV---NYARSRKAAEETAEEIEALGRKALAV 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFL 145
           + ++  +  ++   ++ + +  +L++ +NNA  G++     L + + +     N      
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLF 119

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                   M+K      G G+II++SS G        IR+           +     SK 
Sbjct: 120 CAQEAAKLMEKV-----GGGKIISLSSLG-------SIRY--------LENYTTVGVSKA 159

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           A       LA  L   G  I  N+V  GA+ T+ ++H
Sbjct: 160 ALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKH 194

Length = 250

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 56/225 (24%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
            +D +G   +VTG T GIG   AR     G  VV+  R             + +     +
Sbjct: 1   NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR----------RAPETVDGRPAE 50

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--------IELQFA 137
               D+     V         +H +L++L+NNAG  G+P+ L+ +         +EL   
Sbjct: 51  FHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVEL--- 105

Query: 138 TNHLGHFLL---TNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSG 193
            N L   L+    N ++       ++ GG G I+N+ S  G R              PS 
Sbjct: 106 -NLLAPLLVAQAANAVMQ------QQPGG-GSIVNIGSVSGRR--------------PS- 142

Query: 194 YNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAIAT 237
             G  AY  +K A +L+   L R L  E    +  N+V  G + T
Sbjct: 143 -PGTAAYGAAK-AGLLN---LTRSLAVEWAPKVRVNAVVVGLVRT 182

Length = 252

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 41/212 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T +VTGAT GIG   +  LA  G  V+ G+   A      E    ++   +  A     +
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVI-GIARSAIDDFPGELFACDLADIEQTA-----A 58

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG---HFLLTNL 149
           +LA +         + H ++ ++NN GI   P  L K ++        L       +T  
Sbjct: 59  TLAQIN--------EIHPVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L+ MK        +GRI+N+ S     A              G     +YS +K A + 
Sbjct: 110 FLEGMKLR-----EQGRIVNICS----RAIF------------GALDRTSYSAAKSALVG 148

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIR 241
                A  L E G  IT N+V PG I T + R
Sbjct: 149 CTRTWALELAEYG--ITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMEL 89
           T +VTG   G+G E AR LA RG  H+V+  R  A   + +  +  E+ +  A+V  +  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVAC 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD 130
           D+S   +VR   +E       L  +I+ AG++    + +  
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMT 101

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 56/222 (25%), Positives = 86/222 (38%), Gaps = 30/222 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSAKVDA 86
           SG T  +TGA+ GIG   A   A  G ++V+  +       +  TI    +EI +A   A
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQA 64

Query: 87  M--ELDLSSLASVRNFASEYNIQHH-QLNILINNAG-IMGTPF-MLSKDNIELQFATNHL 141
           +    D+     V   A    ++    ++I +NNA  I  T          +L    N  
Sbjct: 65  LPLVGDVRDEDQVAA-AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVR 123

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           G FL++   L  +KK              S   H L     +      DP  +    AY+
Sbjct: 124 GTFLVSQACLPHLKK--------------SENPHILTLSPPLNL----DPKWFAPHTAYT 165

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHP-GAIATNIIRH 242
            +K    L    LA   ++DG  I  N++ P   IAT  +R+
Sbjct: 166 MAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRN 205

Length = 273

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 36/208 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELD 90
           A+V G    +G      LA  G  V   V DI    +  E +  EI +    K      D
Sbjct: 5   AVVIGGGQTLGEFLCHGLAEAGYDVA--VADI--NSENAEKVADEINAEYGEKAYGFGAD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS--KDNIELQFATNHLGHFLLTN 148
            ++  SV   +   +    ++++L+ +AGI  +  +      + +     N +G+FL   
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFL--- 117

Query: 149 LLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                 ++ ++   + G +GRII ++S+  ++              S +N    YS +K 
Sbjct: 118 ----CAREFSKLMIRDGIQGRIIQINSKSGKVG-------------SKHNS--GYSAAKF 158

Query: 206 ANILHANELARRLKEDGVDITANSVHPG 233
             +     LA  L E G  IT NS+  G
Sbjct: 159 GGVGLTQSLALDLAEHG--ITVNSLMLG 184

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA SGIG ETA + A  G  V +   D      +   +  E   A      LD++  A
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGA----LDVTDRA 60

Query: 96  SVRNFASEYNIQHHQ-LNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLLLD 152
           +     +++       L+ L NNAG+  G PF  +     +     N  G        L 
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALP 120

Query: 153 TMKKTARKSGGEGRIINVSS 172
            +K T        R+IN +S
Sbjct: 121 YLKATP-----GARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 48/217 (22%), Positives = 82/217 (37%), Gaps = 42/217 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTGA+ G+G   AR  A  G  VV+   +     +  E +  E    +  A++ D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHL-----GH 143
               V+    E       ++ ++NNA ++  PF      + D I+ +     L     G 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA---YHEGIRFDKINDPSGYNGFRAY 200
             L   +L   K+      G GR+IN+ +   +     YH+                  Y
Sbjct: 117 LNLLQAVLPDFKER-----GSGRVINIGTNLFQNPVVPYHD------------------Y 153

Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           + +K A +     +A+ L   G  IT N V  G +  
Sbjct: 154 TTAKAALLGFTRNMAKELGPYG--ITVNMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            +     G  A++TGA+ GIG   A+  A  G  +V    DI   +++ +  +       
Sbjct: 3   ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIV--FNDIN--QELVDKGLAAYRELG 58

Query: 84  VDA--MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATN 139
           ++A     D++    V+   S+   +   ++IL+NNAGI+    ML  S ++       +
Sbjct: 59  IEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDID 118

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               F+++  ++ +M K      G G+IIN+ S
Sbjct: 119 LNAPFIVSKAVIPSMIKK-----GHGKIINICS 146

Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 31/156 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG   A   A  G  VV+  R      ++   +  E+ +A  +A+ L
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-----SELVHEVAAELRAAGGEALAL 61

Query: 90  --DLSSLA---SVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQ-----F 136
             DL + A   +    A E      ++++LINN G  I   PF    ++ IE +     F
Sbjct: 62  TADLETYAGAQAAMAAAVE---AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLF 118

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            T      +L ++L          + G G I+NVSS
Sbjct: 119 PTLWCCRAVLPHML----------AQGGGAIVNVSS 144

Length = 260

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 56/226 (24%), Positives = 81/226 (35%), Gaps = 44/226 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           SG  A+VTGA+ GIG   A  L   G  V +  R I           +EI +   K   +
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGRTI---LPQLPGTAEEIEARGGKCIPV 58

Query: 88  ELDLSSLASVRNF----ASEYNIQHHQLNILINNA-----GIMGTP----FMLSKDNIEL 134
             D S    V       A E   Q  +L+IL+NNA      I+       +       + 
Sbjct: 59  RCDHSDDDEVEALFERVARE---QQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD 115

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY 194
                   H+  +      M K      G+G I+ +SS G  L Y   +           
Sbjct: 116 INNVGLRAHYACSVYAAPLMVKA-----GKGLIVIISSTGG-LEYLFNV----------- 158

Query: 195 NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII 240
               AY   K A    A ++A  LK  G  +   S+ PG + T ++
Sbjct: 159 ----AYGVGKAAIDRMAADMAHELKPHG--VAVVSLWPGFVRTELV 198

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTGA  GIG E AR L  RG  + +   + A    +   +       +V  +  D
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG---GDDRVLTVVAD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           ++ LA+++  A E   +   +++++ NAGI
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 27/155 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTG T GIG   A  LA +G+++V+  R+    KDV ++I  +    ++  + +D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-------------LSKDNIELQFA 137
            S          +  I+   + +LINN G +  P+              L K N+E    
Sbjct: 113 FSGDIDEGVKRIKETIEGLDVGVLINNVG-VSYPYARFFHEVDEELLKNLIKVNVE---G 168

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           T  +   +L  +L        RK G    IIN+ S
Sbjct: 169 TTKVTQAVLPGML-------KRKKGA---IINIGS 193

Length = 320

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 37/217 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-----DIAAGKDVKETIVKEIPSAKV 84
           +   A+VT +T GIG   AR LA  G HVV+  R     D A      E +        V
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHV 68

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHL 141
              E     +A+  N        H  ++IL++NA +    G     +++  +     N  
Sbjct: 69  GKAEDRERLVATAVN-------LHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
              L+T  ++  M+K      G G ++ VSS     A+H             + G   Y+
Sbjct: 122 ATALMTKAVVPEMEKR-----GGGSVVIVSSVA---AFHP------------FPGLGPYN 161

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATN 238
            SK A +     LA  L     +I  N + PG I T+
Sbjct: 162 VSKTALLGLTKNLAPEL--APRNIRVNCLAPGLIKTS 196

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 35/220 (15%)

Query: 31  GLTAIVTGAT--SGIGTETARVLALRGVHVVMGV-----RDIAAGKDVKETIV--KEIPS 81
              A+VTG +   GIG    + LA  G  +         +++  G D  E I   +E+  
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 82  --AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF-MLSKDNIELQFA 137
              KV +MELDL+   + +   ++   Q    +IL+NNA       F  L+ + ++  + 
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYM 125

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            N     LL+       +   +KSG  GRIIN++S                       G 
Sbjct: 126 VNVRATTLLS---SQFARGFDKKSG--GRIINMTSG---------------QFQGPMVGE 165

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
            AY+ +K A     + LA  +   G  IT N+++PG   T
Sbjct: 166 LAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDT 203

Length = 256

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           DG  G G  A++TG  SGIG  T    A RG  VV+G  D    K      V  + +   
Sbjct: 2   DGFPGRG--AVITGGASGIGLATGTEFARRGARVVLGDVD----KPGLRQAVNHLRAEGF 55

Query: 85  DA--MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           D   +  D+     V + A E       ++++ +NAGI+
Sbjct: 56  DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIV 94

Length = 275

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELDLS 92
           +VTGAT+G G    R    +G H V     IA G  ++  + +  E+    +   +LD+ 
Sbjct: 4   LVTGATAGFGECITRRFIQQG-HKV-----IATGRRQERLQELKDEL-GDNLYIAQLDVR 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           + A++    +    +   +++L+NNAG+   +      S ++ E    TN+ G   +T  
Sbjct: 57  NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           +L  M +        G IIN+ S      Y  G
Sbjct: 117 VLPGMVERNH-----GHIINIGSTAGSWPYAGG 144

Length = 248

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 27/212 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTGA SGIG   A  LA  G  V +         D      + I +A   A+++
Sbjct: 7   DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAETAEHIEAAGRRAIQI 63

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFL 145
             D++S A +R   +    +   L + +N AGI        + ++  +     N  G FL
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFL 123

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                   M     ++GG G I+N++S         GI  ++    + YN       SK 
Sbjct: 124 SCQAEARAM----LENGG-GSIVNIAS-------MSGIIVNRGLLQAHYNA------SKA 165

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
             I  +  LA      G  I  NS+ PG  AT
Sbjct: 166 GVIHLSKSLAMEWVGRG--IRVNSISPGYTAT 195

Length = 254

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELD 90
           T +V GAT  IG    R L  RG +VV   R+ +   GK+ KE   KE+P A+V  +  D
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEV--VFGD 119

Query: 91  LSSLASVR 98
           ++   S+R
Sbjct: 120 VTDADSLR 127

Length = 390

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 33/215 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTG  +GIG    R+    G  V +       G++V +++  E     V     D
Sbjct: 18  GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGE---PNVCFFHCD 74

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLL 146
           ++    V         +   L+I++NNAG+ G P      +     E  F  N  G FL 
Sbjct: 75  VTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFL- 133

Query: 147 TNLLLDTMKKTARK--SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
                  MK  AR      +G I+++ S    +    G+            G  AY+ SK
Sbjct: 134 ------GMKHAARIMIPLKKGSIVSLCSVASAIG---GL------------GPHAYTGSK 172

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNI 239
            A +     +A  L + G  I  N V P A+ T +
Sbjct: 173 HAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTAL 205

Length = 280

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 53/220 (24%), Positives = 80/220 (36%), Gaps = 47/220 (21%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 92
           ++TG   G+G   A  LA +G  + +    I   ++  E  V E  +   +      +++
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLAL----IDLNQEKLEEAVAECGALGTEVRGYAANVT 64

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----------SKDNIELQFATNHL 141
               V    ++      QLN LINNAGI+    ++           S +  +     N  
Sbjct: 65  DEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLT 124

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           G FL        M ++  K    G IIN+SS    +A              G  G   YS
Sbjct: 125 GVFLCGREAAAKMIESGSK----GVIINISS----IARA------------GNMGQTNYS 164

Query: 202 QSKLA----NILHANELARRLKEDGVDITANSVHPGAIAT 237
            SK       +  A ELAR        I   ++ PG I T
Sbjct: 165 ASKAGVAAMTVTWAKELAR------YGIRVAAIAPGVIET 198

Length = 253

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 38.2 bits (90), Expect = 0.001
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           T ++TG   G+G   AR LA RG   +V +      A          E   A+V  +  D
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           ++   ++    +        L  +I+ AG+
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 50/206 (24%), Positives = 74/206 (35%), Gaps = 39/206 (18%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A++ GAT GIG   AR LA RG  +++  RD  A       +  E+ +    A   D+++
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGA----LAGLAAEVGALARPA---DVAA 53

Query: 94  LASVRNFASEYNIQHHQLNILINNAG-IMGTPFM-LSKDNIELQFATNHLGHFLLTNLLL 151
              V   A E         +L+  AG I+G P               N  G  L+    L
Sbjct: 54  ELEVWALAQELGPLD----LLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHAL 109

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +   AR                      G   + +  P    G  AY+ +K A  L A
Sbjct: 110 ALLAAGAR------------------LVFLGAYPELVMLP----GLSAYAAAKAA--LEA 145

Query: 212 NELARRLKEDGVDITANSVHPGAIAT 237
                R +  G+ +T   V P A+ T
Sbjct: 146 YVEVARKEVRGLRLTL--VRPPAVDT 169

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 55/213 (25%), Positives = 83/213 (38%), Gaps = 31/213 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA SGIG  TA   A  G  + +        +D  E +V+ I +    A+ L
Sbjct: 54  QGRKALITGADSGIGRATAIAFAREGADIALNYLP-EEEQDAAE-VVQLIQAEGRKAVAL 111

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAG---IMGTPFMLSKDNIELQFATNHLGHF 144
             DL   A  R        +   L+IL+N AG    +     ++ +  +  F TN    F
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            L    +  +   A        IIN  S     +Y           PS       Y+ +K
Sbjct: 172 WLCKAAIPHLPPGA-------SIINTGSIQ---SYQ----------PSP--TLLDYASTK 209

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIAT 237
            A +     LA+++ E G  I  N+V PG + T
Sbjct: 210 AAIVAFTKALAKQVAEKG--IRVNAVAPGPVWT 240

Length = 300

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 50/214 (23%), Positives = 76/214 (35%), Gaps = 26/214 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A V GA  G+G   AR  A  G  V +  R  A  + +   I+++   +   A+  D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-AVPTDAR 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNL 149
               V         +   L +L+ NAG     F +   +    E  +     G FL    
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG-ANVWFPILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               M        G G II   +          +R        G  GF A++ +K A   
Sbjct: 119 AAKRMLAR-----GRGTIIFTGATA-------SLR--------GRAGFAAFAGAKFALRA 158

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
            A  +AR L   G+ + A+ +  G I T+ IR  
Sbjct: 159 LAQSMARELGPKGIHV-AHVIIDGGIDTDFIRER 191

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 50/214 (23%), Positives = 77/214 (35%), Gaps = 42/214 (19%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A++TG  SGIG          G  V   V + +A K    ++ +      V  +E D++S
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARV--AVLERSAEK--LASLRQRFG-DHVLVVEGDVTS 63

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FATNHLGHF 144
            A  +    +      +L+  + NAGI    +  S  +I  +         F  N  G+ 
Sbjct: 64  YADNQRAVDQTVDAFGKLDCFVGNAGIWD--YNTSLVDIPAETLDTAFDEIFNVNVKGYL 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRII-NVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           L     L  +K +       G +I  +S+      Y           P G  G   Y+ S
Sbjct: 122 LGAKAALPALKAS------GGSMIFTLSNSSF---Y-----------PGG--GGPLYTAS 159

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           K A +    +LA  L      I  N V PG   T
Sbjct: 160 KHAVVGLVRQLAYEL---APKIRVNGVAPGGTVT 190

Length = 263

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TGA+SGIG  TA   A RG  +V+  RD  A + V E        A+V  +  D++  
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDA 68

Query: 95  ASVRNFASEYNIQHHQLNILINNAGI 120
             V+  A++      ++++ +NN G+
Sbjct: 69  DQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 36  VTGATSGIGTETARVLALR-GVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 91
           VTG   GIG   AR LA R G  +V+ G   +   ++ K   +  + +     +    D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 135
           +  A+VR    +   ++  ++ +I+ AG++    +  K   + +
Sbjct: 270 TDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFE 313

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 45/206 (21%), Positives = 61/206 (29%), Gaps = 70/206 (33%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +VTG + GIG   AR LA RG                         S KV         
Sbjct: 1   VLVTGGSGGIGGAIARWLASRG-------------------------SPKV--------- 26

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
              +     +          +++NA I   G    L+   IE     N +G   L     
Sbjct: 27  ---LVVSRRDV---------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAR 74

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
           + MK         GR I +SS                    G  G   Y+ SK A    A
Sbjct: 75  ELMKAK-----RLGRFILISSVAGLF---------------GAPGLGGYAASKAALDGLA 114

Query: 212 NELARRLKEDGVDITANSVHPGAIAT 237
            + A     +G  + A +V  G  A 
Sbjct: 115 QQWASEGWGNG--LPATAVACGTWAG 138

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             I+TG +SG+G   A+  A  G +VV+  R     ++ K  I  E    +V  +++D+ 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVR 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNA 118
           +   V+    + + +  +++ LINNA
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
           ID SG  A  T ++ GIG   ARVLA  G  V++  R+    K  +E I K   +  V 
Sbjct: 3  KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI-KSESNVDVS 61

Query: 86 AMELDLS 92
           +  DL+
Sbjct: 62 YIVADLT 68

Length = 263

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 28/148 (18%)

Query: 35  IVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           IVTG  SGIG   +  LA  G + V+ G R     +  +E +    P A+   +++DL+ 
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEE-LRALQPRAEF--VQVDLTD 66

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT---------NHLGHF 144
            A  R+   +   +  +++ L+NNAG+         D + L+            N + ++
Sbjct: 67  DAQCRDAVEQTVAKFGRIDGLVNNAGV--------NDGVGLEAGREAFVASLERNLIHYY 118

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           ++ +  L  +K +       G I+N+SS
Sbjct: 119 VMAHYCLPHLKAS------RGAIVNISS 140

Length = 258

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 35/202 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +VTGAT  +G+   R L  +G  V   VR  +            +    V+ +E DL+ 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSD--------AVLLDGLPVEVVEGDLTD 52

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT 153
            AS+       +   H          +     + +KD  EL + TN  G     N+L   
Sbjct: 53  AASLAAAMKGCDRVFH----------LAAFTSLWAKDRKEL-YRTNVEG---TRNVL--- 95

Query: 154 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 213
               A ++G   R+++ SS    L      R D+    +       Y +SKL     A  
Sbjct: 96  --DAALEAGVR-RVVHTSSIA-ALGGPPDGRIDETTPWNERPFPNDYYRSKLL----AEL 147

Query: 214 LARRLKEDGVDITANSVHPGAI 235
                  +G+D+    V+P A+
Sbjct: 148 EVLEAAAEGLDVV--IVNPSAV 167

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK12939	250	short chain dehydrogenase; Provisional	99.98
PRK06179	270	short chain dehydrogenase; Provisional	99.98
PRK06138	252	short chain dehydrogenase; Provisional	99.98
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.98
PRK06180	277	short chain dehydrogenase; Provisional	99.98
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.98
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.98
PRK12937	245	short chain dehydrogenase; Provisional	99.98
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.98
PRK08703	239	short chain dehydrogenase; Provisional	99.98
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK08267	260	short chain dehydrogenase; Provisional	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.98
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.97
PRK06057	255	short chain dehydrogenase; Provisional	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK12744	257	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK12742	237	oxidoreductase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK06924	251	short chain dehydrogenase; Provisional	99.96
PRK07577	234	short chain dehydrogenase; Provisional	99.96
PRK07326	237	short chain dehydrogenase; Provisional	99.96
PRK12828	239	short chain dehydrogenase; Provisional	99.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PRK12829	264	short chain dehydrogenase; Provisional	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.95
PRK07041	230	short chain dehydrogenase; Provisional	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.94
PRK06953	222	short chain dehydrogenase; Provisional	99.94
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.93
PRK08219	227	short chain dehydrogenase; Provisional	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.88
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.83
PRK06720	169	hypothetical protein; Provisional	99.83
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02572	442	UDP-sulfoquinovose synthase	99.82
PLN02653	340	GDP-mannose 4,6-dehydratase	99.81
PLN02650	351	dihydroflavonol-4-reductase	99.81
PLN02214	342	cinnamoyl-CoA reductase	99.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
PLN00198	338	anthocyanidin reductase; Provisional	99.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.78
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.78
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.76
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.75
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.75
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.75
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.74
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.73
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.73
PLN02686	367	cinnamoyl-CoA reductase	99.71
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.71
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.7
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.7
PLN02427	386	UDP-apiose/xylose synthase	99.68
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.65
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.64
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.62
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.62
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.61
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.61
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.61
PLN02206	442	UDP-glucuronate decarboxylase	99.61
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.6
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.59
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.58
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.56
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.55
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.53
PLN02996	491	fatty acyl-CoA reductase	99.48
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.48
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.44
PRK07201	657	short chain dehydrogenase; Provisional	99.43
CHL00194	317	ycf39 Ycf39; Provisional	99.43
PLN02778	298	3,5-epimerase/4-reductase	99.41
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.38
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.35
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.33
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.32
PLN02260	668	probable rhamnose biosynthetic enzyme	99.29
PRK05865	854	hypothetical protein; Provisional	99.29
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.28
PLN02503	605	fatty acyl-CoA reductase 2	99.26
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.26
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.23
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.14
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.12
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.1
PRK08309	177	short chain dehydrogenase; Provisional	99.09
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.06
PLN00016	378	RNA-binding protein; Provisional	98.98
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.89
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.87
PRK12320	699	hypothetical protein; Provisional	98.84
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.71
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.66
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.62
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.62
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.58
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.57
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.52
COG2910	211	Putative NADH-flavin reductase [General function p	98.46
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.4
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.4
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.35
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.33
PRK09620	229	hypothetical protein; Provisional	98.31
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.3
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.28
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.27
PLN00106	323	malate dehydrogenase	98.27
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.23
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.22
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.17
PTZ00325	321	malate dehydrogenase; Provisional	98.14
PRK14982	340	acyl-ACP reductase; Provisional	98.07
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.03
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.89
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.87
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.82
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.82
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.77
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.73
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.72
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.69
COG3268	382	Uncharacterized conserved protein [Function unknow	97.65
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.63
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.61
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.59
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.58
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.58
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.55
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.51
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.49
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.47
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.47
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.46
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.45
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.44
KOG2774	366	consensus NAD dependent epimerase [General functio	97.42
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.41
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.38
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.36
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.33
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.33
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.32
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.32
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.31
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.3
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.3
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.3
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.29
PRK08328	231	hypothetical protein; Provisional	97.29
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.28
PRK05086	312	malate dehydrogenase; Provisional	97.26
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.25
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.25
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.24
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.23
PRK06849	389	hypothetical protein; Provisional	97.22
PRK08223	287	hypothetical protein; Validated	97.19
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.18
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.13
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.13
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.12
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.12
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.1
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.09
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.08
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.07
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.07
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.06
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.06
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.05
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.05
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.04
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.02
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.02
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.95
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.94
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.94
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.93
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.9
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.88
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.85
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.84
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.83
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.81
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.79
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.78
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.76
PTZ00117	319	malate dehydrogenase; Provisional	96.76
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.75
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.74
PRK04148	134	hypothetical protein; Provisional	96.74
PRK07411	390	hypothetical protein; Validated	96.74
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.72
PRK09496	453	trkA potassium transporter peripheral membrane com	96.7
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.69
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.69
PLN02602	350	lactate dehydrogenase	96.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.68
PRK14851	679	hypothetical protein; Provisional	96.65
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.64
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.63
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.62
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.62
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.6
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.59
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.59
PLN00203	519	glutamyl-tRNA reductase	96.59
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.55
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.52
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.52
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.52
PRK14968	188	putative methyltransferase; Provisional	96.51
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.49
PRK09496	453	trkA potassium transporter peripheral membrane com	96.48
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.45
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.44
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.44
PRK12480	330	D-lactate dehydrogenase; Provisional	96.44
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.43
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.42
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.36
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.35
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.33
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.27
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.26
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.22
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.22
PRK14852	989	hypothetical protein; Provisional	96.2
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.19
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.18
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.17
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.16
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.16
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.15
PRK05442	326	malate dehydrogenase; Provisional	96.12
PRK08655	437	prephenate dehydrogenase; Provisional	96.12
PRK06487	317	glycerate dehydrogenase; Provisional	96.12
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.12
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.11
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.1
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.09
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.07
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.05
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.05
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.04
PRK07877	722	hypothetical protein; Provisional	96.03
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.02
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.0
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.0
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.99
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.98
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.95
PLN02740	381	Alcohol dehydrogenase-like	95.93
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.91
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.91
PLN02928	347	oxidoreductase family protein	95.9
PLN02494	477	adenosylhomocysteinase	95.89
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.88
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.88
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.87
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.86
PRK06223	307	malate dehydrogenase; Reviewed	95.85
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.83
PRK13243	333	glyoxylate reductase; Reviewed	95.83
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.82
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.82
PTZ00354	334	alcohol dehydrogenase; Provisional	95.81
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.81
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.75
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.73
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.72
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.67
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	95.66
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.63
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.63
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.61
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.6
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.59
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.58
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.56
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.54
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.54
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.53
PLN03139	386	formate dehydrogenase; Provisional	95.51
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.51
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.51
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.5
COG2894	272	MinD Septum formation inhibitor-activating ATPase	95.5
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.47
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.46
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.46
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.43
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.41
PRK06932	314	glycerate dehydrogenase; Provisional	95.39
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.38
PRK10669	558	putative cation:proton antiport protein; Provision	95.32

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.9e-41  Score=284.11  Aligned_cols=222  Identities=27%  Similarity=0.350  Sum_probs=193.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++++|||||+|||.++|++|+++|++|++++|++++++++.+++.+.+ +..+.++++|+++++++.++.+++.+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999999999999999877 678999999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      .+++|++|||||+.  +++.+.++++.++++++|+.+...++++++|.|.++     +.|.||+++|.++..        
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-----~~G~IiNI~S~ag~~--------  148 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-----GAGHIINIGSAAGLI--------  148 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechhhcC--------
Confidence            89999999999975  457899999999999999999999999999999996     689999999999887        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC--chhhhhhHHHhhhhHHhhhh
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN--SLFRSMNTILHALPGIAGKC  263 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~p~~~~~~  263 (282)
                             |.|..+.|++||+++.+|+++|+.|+.++|  |+|.+|+||++.|++++..  .........+...|+.+++.
T Consensus       149 -------p~p~~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~  219 (265)
T COG0300         149 -------PTPYMAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEA  219 (265)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCccccccccccccccccccchhhccCHHHHHHH
Confidence                   689999999999999999999999999999  9999999999999999621  11111123334455556655


Q ss_pred             cccChHHHH
Q 023438          264 LLKNVQQVI  272 (282)
Q Consensus       264 ~~~~~~~~~  272 (282)
                      ......++.
T Consensus       220 ~~~~l~~~k  228 (265)
T COG0300         220 ALKALEKGK  228 (265)
T ss_pred             HHHHHhcCC
Confidence            555544433

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.6e-39  Score=268.86  Aligned_cols=193  Identities=28%  Similarity=0.338  Sum_probs=178.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++|||||+|||.++|++|++.|++|++++|..++++++.+++.+    ..+.++..||+|.++++.+++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999999999888888743    46899999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||..  .+..+.+.++|+.++++|+.|.++.+++.+|.|.++     +.|.||++||.+|..        
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-----~~G~IiN~~SiAG~~--------  145 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-----KSGHIINLGSIAGRY--------  145 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-----CCceEEEeccccccc--------
Confidence            99999999999964  457789999999999999999999999999999997     578999999999987        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchh
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF  246 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~  246 (282)
                             ++++.+.|+++|+++.+|+++|+.|+..++  |||.+|+||.+.|..+....+.
T Consensus       146 -------~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~  197 (246)
T COG4221         146 -------PYPGGAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFE  197 (246)
T ss_pred             -------cCCCCccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCC
Confidence                   689999999999999999999999999888  9999999999988887777655

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-40  Score=281.86  Aligned_cols=196  Identities=30%  Similarity=0.301  Sum_probs=179.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ...+.||+|+|||||+|||+++|.+|++.|++++++.|...+++...+++++..+..+++++++|++|.+++++.++.+.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999998999887765569999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++|++|+||||||+..  ...+.+.+++...|++|++|+..++|+++|+|+++     +.|+||++||.+|..      
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-----~~GhIVvisSiaG~~------  155 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-----NDGHIVVISSIAGKM------  155 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-----CCCeEEEEecccccc------
Confidence            99999999999999754  35677889999999999999999999999999996     469999999999987      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.|....|++||+|+.+|+++|+.|+...+..|++ +|+||+|+|++...
T Consensus       156 ---------~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  156 ---------PLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             ---------CCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence                     57778899999999999999999999998877888 99999999997554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-37  Score=263.47  Aligned_cols=219  Identities=25%  Similarity=0.344  Sum_probs=191.2

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...+.+|++||||||++|+|+++|.+|+++|+.+++.|.+.+..+++.+++.+.  + ++.++.||+++.+++.++.+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999999999998776  3 7999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++.|++|++|||||+.  .+..+.+.+++++++++|+.|++..+|+|+|.|.++     ++|+||.++|.+|..     
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-----~~GHIV~IaS~aG~~-----  178 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-----NNGHIVTIASVAGLF-----  178 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-----CCceEEEehhhhccc-----
Confidence            99999999999999975  347789999999999999999999999999999997     689999999999987     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCc-EEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhh
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVD-ITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAG  261 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~  261 (282)
                                +.++..+|++||+|+.+|.++|..|+...+.+ |+..+|+|++++|+|.+.......  -+.-..|+.++
T Consensus       179 ----------g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~--l~P~L~p~~va  246 (300)
T KOG1201|consen  179 ----------GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPT--LAPLLEPEYVA  246 (300)
T ss_pred             ----------CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCcc--ccCCCCHHHHH
Confidence                      68999999999999999999999999776543 999999999999999986222221  22223555566


Q ss_pred             hhcccCh
Q 023438          262 KCLLKNV  268 (282)
Q Consensus       262 ~~~~~~~  268 (282)
                      +.+++..
T Consensus       247 ~~Iv~ai  253 (300)
T KOG1201|consen  247 KRIVEAI  253 (300)
T ss_pred             HHHHHHH
Confidence            6555543

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=263.85  Aligned_cols=192  Identities=26%  Similarity=0.282  Sum_probs=171.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|++|+++++.+++++.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999888888777776543 3468899999999999999999986


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                       ++|++|++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..      
T Consensus        82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-----~~g~Ii~isS~~~~~------  149 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-----GFGRIIYSTSVAIKE------  149 (263)
T ss_pred             -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccC------
Confidence             5889999999999753  35678999999999999999999999999999875     468999999987654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.+.+..|+++|+|+++|+++++.|++++|  ||||+|+||+++|++..
T Consensus       150 ---------~~~~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  196 (263)
T PRK08339        150 ---------PIPNIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVI  196 (263)
T ss_pred             ---------CCCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHH
Confidence                     567788999999999999999999999999  99999999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.5e-36  Score=259.72  Aligned_cols=188  Identities=18%  Similarity=0.215  Sum_probs=162.7

Q ss_pred             CCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |.++||+++||||+  +|||+++|++|++.|++|++++|+.. ..+..+++.+... .. .++++|++|.++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHH
Confidence            35689999999997  89999999999999999999999853 3344455544432 23 67899999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .+++|++|++|||||+..      +..+.+.++|++++++|+.++++++++++|+|.+       +++||++||.++.. 
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~-  149 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVK-  149 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCcc-
Confidence            999999999999999742      3557889999999999999999999999999964       47999999977654 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                    +.+.+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       150 --------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        150 --------------YVPHYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAAS  196 (274)
T ss_pred             --------------CCCcchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHh
Confidence                          467788999999999999999999999999  99999999999998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=259.06  Aligned_cols=189  Identities=15%  Similarity=0.184  Sum_probs=163.0

Q ss_pred             CCCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +..|++|++|||||++  |||+++|++|++.|++|++++|+.... +..+++.+.. + ...++++|++|.+++++++++
T Consensus         2 ~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~   78 (271)
T PRK06505          2 EGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAESL-G-SDFVLPCDVEDIASVDAVFEA   78 (271)
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHhc-C-CceEEeCCCCCHHHHHHHHHH
Confidence            3447899999999996  999999999999999999999986433 3344444332 2 235789999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +.+++|++|++|||||+..      +..+.+.++|++.+++|+.+++.++|+++|+|.+       +|+||++||.++..
T Consensus        79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~  151 (271)
T PRK06505         79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTR  151 (271)
T ss_pred             HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCccc
Confidence            9999999999999999753      3457889999999999999999999999999963       47999999987654


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                     +.+++..|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++..
T Consensus       152 ---------------~~~~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        152 ---------------VMPNYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGA  198 (271)
T ss_pred             ---------------cCCccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccc
Confidence                           467888999999999999999999999999  99999999999999864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-36  Score=257.97  Aligned_cols=186  Identities=17%  Similarity=0.165  Sum_probs=162.6

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+. ...+..+++.    +.++.++++|++|+++++++++++.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHH
Confidence            3689999999999  8999999999999999999999983 3344333332    2357889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++|++|++|||||...      +..+.+.++|+..+++|+.+++.++++++|+|.+       +++||++||.++..  
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~--  149 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSER--  149 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCccc--
Confidence            99999999999999752      3557888999999999999999999999999853       47999999977654  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.+++..|+++|+|+++|+++|+.|++++|  |+||+|+||+++|++...
T Consensus       150 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        150 -------------AIPNYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             -------------cCCcchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccc
Confidence                         467888999999999999999999999999  999999999999998654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=256.75  Aligned_cols=190  Identities=16%  Similarity=0.151  Sum_probs=163.9

Q ss_pred             CCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+... .+..+++.+...+.++.++++|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            56789999999997  899999999999999999999876422 233344444433456889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .+++|++|++|||||+..      +..+.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||..+.. 
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~-  153 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGER-  153 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCcc-
Confidence            999999999999999642      3457788999999999999999999999999953       47999999987765 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                    +.+++..|+++|+|+++|+++++.|++++|  ||||+|+||+++|++.+
T Consensus       154 --------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~  200 (257)
T PRK08594        154 --------------VVQNYNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAK  200 (257)
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHh
Confidence                          467788999999999999999999999999  99999999999999754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=255.73  Aligned_cols=193  Identities=16%  Similarity=0.201  Sum_probs=165.3

Q ss_pred             ccCCCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      +.+.++++||+++||||+  +|||+++|++|++.|++|++++|+.+. .+..+++.+..+  .+.++++|++|+++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELD--APIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhc--cceEEecCcCCHHHHHHH
Confidence            345677899999999998  599999999999999999999998643 223344444332  356789999999999999


Q ss_pred             HHHHHhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          101 ASEYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      ++++.+++|++|++|||||+..      +..+.+.++|++.+++|+.++++++++++|+|++       +++||++||.+
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~  151 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYG  151 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEeccc
Confidence            9999999999999999999742      3456788999999999999999999999999953       47999999976


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..               +.+++..|+++|+|+.+|+++|+.|++++|  |+||+|+||.++|++.+.
T Consensus       152 ~~~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        152 AEK---------------VVENYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASG  202 (258)
T ss_pred             ccc---------------CCccchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhc
Confidence            654               467788999999999999999999999999  999999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-35  Score=253.97  Aligned_cols=193  Identities=26%  Similarity=0.366  Sum_probs=172.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+...+.++.++++|++|++++..+++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888887765433557889999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||..  ....+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..        
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  150 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-----GRGSIVNIASTHAFK--------  150 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-----CCeEEEEECChhhcc--------
Confidence            99999999999964  234567889999999999999999999999999875     468999999977654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+|+++++++++.|+++.|  ||||+|+||+++|++...
T Consensus       151 -------~~~~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        151 -------IIPGCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTED  198 (260)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhh
Confidence                   467788999999999999999999999998  999999999999998653

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-35  Score=252.45  Aligned_cols=194  Identities=30%  Similarity=0.359  Sum_probs=172.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||.++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999998888877777654  45688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++++|++|||||...   +..+.+.+++++.+++|+.+++.++++++|.+++.     +.++||++||..+...     
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----~~~~iv~~sS~~~~~~-----  149 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-----GGGSLIFTSTFVGHTA-----  149 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEechHhhcc-----
Confidence            9999999999999742   35577889999999999999999999999999875     4689999999766421     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.+++..|++||+++++++++++.|+.++|  |+||+|+||+++|++.+..
T Consensus       150 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        150 ---------GFPGMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             ---------CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccc
Confidence                     467788999999999999999999999988  9999999999999987653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=4e-35  Score=253.78  Aligned_cols=192  Identities=32%  Similarity=0.372  Sum_probs=169.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...++||+++||||++|||+++|++|++.|++|++++|+.+.+++..+++..... +.++..+.||+++.++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999998888776432 456999999999999999999998


Q ss_pred             Hhc-CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHH-HHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          105 NIQ-HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLG-HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       105 ~~~-~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      .++ +|++|++|||||...   +..+.+.++|++.+++|+.| .+.+.+.+.+++.++     +++.|+++||.++..+ 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-----~gg~I~~~ss~~~~~~-  156 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-----KGGSIVNISSVAGVGP-  156 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-----CCceEEEEeccccccC-
Confidence            888 799999999999753   46789999999999999995 666666777777764     5789999999877652 


Q ss_pred             cCCccccCCCCCCCCCCC-ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          180 HEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                                    .... ..|+++|+|+++|+++++.||.++|  ||||+|+||.+.|++
T Consensus       157 --------------~~~~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  157 --------------GPGSGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSL  201 (270)
T ss_pred             --------------CCCCcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCc
Confidence                          2333 7999999999999999999999999  999999999999998

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=255.39  Aligned_cols=194  Identities=24%  Similarity=0.252  Sum_probs=175.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.+.+++.++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999888888888777665678899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++|||||...  +..+.+.++|++.+++|+.+++.++++++|++++.     +.++||++||..+..      
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  151 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-----AAASIVCVNSLLALQ------  151 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCcEEEEeccccccC------
Confidence            99999999999999753  35677889999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+|+.+++++++.|+.++|  |+||+|+||+++|+++.
T Consensus       152 ---------~~~~~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        152 ---------PEPHMVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWR  198 (265)
T ss_pred             ---------CCCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhh
Confidence                     467788999999999999999999999998  99999999999999865

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=253.61  Aligned_cols=192  Identities=26%  Similarity=0.305  Sum_probs=166.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+.  +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988642  3333344332  45788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+|++|++|||||...  +..+.+.++|++.+++|+.+++.++++++++|.++    +.+++||++||..+..       
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~-------  148 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ----GNGGKIINIASMLSFQ-------  148 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc----CCCCEEEEeCChhhcC-------
Confidence            9999999999999753  35677899999999999999999999999999864    1258999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|++||+|+++++++++.|++++|  |+||+|+||+++|++.+..
T Consensus       149 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~~  197 (251)
T PRK12481        149 --------GGIRVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAAL  197 (251)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhhc
Confidence                    456678999999999999999999999999  9999999999999987643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-35  Score=254.96  Aligned_cols=188  Identities=14%  Similarity=0.133  Sum_probs=162.1

Q ss_pred             CCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++|+++||||  ++|||+++|++|++.|++|++++|+. +..+..+++.+...  ....+++|++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            68999999997  67999999999999999999998863 34455555554432  356789999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++++|++|||||+...       ..+.+.++|+..+++|+.+++.++|+++|+|++      ++++||++||.++..  
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~------~~g~Iv~iss~~~~~--  152 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG------RNSAIVALSYLGAVR--  152 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh------cCcEEEEEccccccc--
Confidence            99999999999997532       235677899999999999999999999999975      357999999987664  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.+++..|+++|+|+.+|+++++.|++++|  ||||+|+||+++|++.+.
T Consensus       153 -------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        153 -------------AIPNYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASG  200 (261)
T ss_pred             -------------CCCCcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhc
Confidence                         567889999999999999999999999999  999999999999998654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.2e-35  Score=254.31  Aligned_cols=188  Identities=17%  Similarity=0.142  Sum_probs=163.6

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChh--hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +++||+++||||+  +|||+++|++|++.|++|++++|+.+  +.++..+++.+.  ...+.++++|++|++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHH
Confidence            4789999999986  89999999999999999998876543  344555555543  23577899999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCC------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          104 YNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +.+++|++|++|||||+.      .+..+.+.++|++.+++|+.+++.++|+++|+|++       +++||++||..+..
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~  153 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGVR  153 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEecccccc
Confidence            999999999999999974      23567789999999999999999999999999964       47999999977654


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                     +.+++..|+++|+|+.+|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       154 ---------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        154 ---------------AIPNYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASS  200 (258)
T ss_pred             ---------------CCcccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhh
Confidence                           567888999999999999999999999999  99999999999999764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.6e-35  Score=253.43  Aligned_cols=188  Identities=31%  Similarity=0.394  Sum_probs=168.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.  +.++.++.+|++++++++.+++++.+.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999 7777777777553  4468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          109 HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      |++|++|||||...   +..+.+.+.|++++++|+.+++.++++++|++.+.      +++||++||..+..        
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~--------  146 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQA--------  146 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcC--------
Confidence            99999999999753   34567889999999999999999999999999873      58999999987665        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+|+++|+++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       147 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        147 -------ADLYRSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDK  194 (272)
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhh
Confidence                   456778999999999999999999999998  999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-35  Score=252.58  Aligned_cols=186  Identities=17%  Similarity=0.185  Sum_probs=161.9

Q ss_pred             CCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++||+++||||++  |||+++|++|+++|++|++.+|+. ..++..+++.+.. + ...++++|++|+++++++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999997  999999999999999999999884 3445556665543 2 234678999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          107 QHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++|++|++|||||...      +..+.+.++|++.+++|+.+++.++++++|+|++       +|+||++||.++..   
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~---  152 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEK---  152 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCcccc---
Confidence            9999999999999642      3557889999999999999999999999999953       47999999977654   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                  +.+++..|++||+|+.+|+++|+.|++++|  |+||+|+||.++|++..
T Consensus       153 ------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        153 ------------VIPNYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASS  199 (260)
T ss_pred             ------------CCCcccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhh
Confidence                        467788999999999999999999999999  99999999999999854

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=256.56  Aligned_cols=205  Identities=43%  Similarity=0.605  Sum_probs=177.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||+++||||++|||+++|++|++.|++|++++|+.+..++..+++.+..++.++.++.+|+++.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999999888888887766566789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          107 QHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      .++++|+||||||.... ..+.+.++++..+++|+.+++.+++.++|.|++      ..++||++||.++..+   .+.+
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~------~~~riv~vsS~~~~~~---~~~~  160 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRA------GRARVTSQSSIAARRG---AINW  160 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh------CCCCeEEEechhhcCC---CcCc
Confidence            99999999999997643 335688999999999999999999999999986      2579999999876543   2344


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +++....+.++...|+.||+|+.+|++.|+.++.  ..|  |+||+|+||+++|++...
T Consensus       161 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g--I~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        161 DDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWG--ITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             ccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCC--eEEEEEecceeccCcccc
Confidence            4444455667788999999999999999998654  456  999999999999998754

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=6.2e-36  Score=237.24  Aligned_cols=195  Identities=29%  Similarity=0.309  Sum_probs=172.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++.|.++||||++|||+||++.|+++|++|++.+++....+.....+.. +  .+-..+.||+++.++++.++++....
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g-~--~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG-Y--GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC-C--CccceeeeccCcHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999998877777666532 1  35778999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|.+++++||||+...  +.....++|++.+.+|+.+.|+++|++.+.+....   +++.+||++||+.+..        
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGki--------  156 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKI--------  156 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhccc--------
Confidence            9999999999999754  56789999999999999999999999999966542   2455999999988877        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCch
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  245 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  245 (282)
                             +.-++..|+++|+++.+|++..++|++++|  ||||.|.||+|.|||....+.
T Consensus       157 -------GN~GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~  207 (256)
T KOG1200|consen  157 -------GNFGQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPP  207 (256)
T ss_pred             -------ccccchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCH
Confidence                   467889999999999999999999999999  999999999999999987753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=250.15  Aligned_cols=195  Identities=27%  Similarity=0.349  Sum_probs=169.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++..+.+|++++++++++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888877776554  34688899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  +..+.+.++|++.+++|+.+++.+++++.++|.++    +.+++|+++||..+...      
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~------  152 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ----GQGGVIINTASMSGHII------  152 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc----CCCcEEEEECcHHhcCC------
Confidence            9999999999999753  35567889999999999999999999999999874    12478999999765431      


Q ss_pred             ccCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              ..+ ....|+++|+|+++++++++.|++++|  |+||+|+||+++|++.+..
T Consensus       153 --------~~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~~  202 (253)
T PRK05867        153 --------NVPQQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEPY  202 (253)
T ss_pred             --------CCCCCccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCcccccc
Confidence                    112 457899999999999999999999999  9999999999999987643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=251.41  Aligned_cols=186  Identities=13%  Similarity=0.197  Sum_probs=160.7

Q ss_pred             CCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++||+++||||++  |||+++|++|++.|++|++++|+ ..+++..+++....  ..+.++.+|++|+++++.+++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  99999999999999999999987 34455566665543  2467789999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      ++|++|++|||||+...       ..+.+.++|++.+++|+.+++.+++++.|.+.+       +++||++||.++..  
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~--  151 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER--  151 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCC--
Confidence            99999999999996432       335678899999999999999999999886642       47999999977654  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                   +.+++..|+++|+|+++|+++++.|+++.|  ||||+|+||+++|++..
T Consensus       152 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        152 -------------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAAS  198 (262)
T ss_pred             -------------CCCCcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHh
Confidence                         567888999999999999999999999999  99999999999998754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=249.31  Aligned_cols=193  Identities=21%  Similarity=0.311  Sum_probs=167.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|+++||||++|||+++|++|++.|++|++++| +.+.++...+++.... +.++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998865 5556666666665432 4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          106 IQHHQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      ..++++|++|||||...        +..+.+.+++...+++|+.+++.++++++|.|++.     +.++||++||..+..
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~  157 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-----GGGSIISLSSTGNLV  157 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-----CCEEEEEEecccccc
Confidence            99999999999998642        23466789999999999999999999999999874     467999999976654


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                     +.+++..|+++|+|+++++++|+.|+.++|  |+||+|+||+++|++.+.
T Consensus       158 ---------------~~~~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        158 ---------------YIENYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             ---------------CCCCcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhh
Confidence                           467788999999999999999999999988  999999999999998654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-34  Score=250.85  Aligned_cols=187  Identities=17%  Similarity=0.172  Sum_probs=161.1

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -|++|+++||||+  +|||+++|++|++.|++|++++|+.. ..+..+++.++..  ....+++|++|+++++++++++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHH
Confidence            3578999999997  89999999999999999999988732 3344455544432  35678999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++|++|++|||||+..      +..+.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||.++..  
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~--  154 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEK--  154 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEecccccc--
Confidence            99999999999999753      3457788999999999999999999999999853       47999999976554  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                   +.+++..|+++|+|+.+|+++|+.|+.++|  ||||+|+||+++|++..
T Consensus       155 -------------~~p~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        155 -------------VMPHYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAAS  201 (272)
T ss_pred             -------------CCCcchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHh
Confidence                         567888999999999999999999999999  99999999999998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=255.23  Aligned_cols=194  Identities=21%  Similarity=0.232  Sum_probs=163.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh----------hhHHHHHHHHHHhCCCCceeEEEccCCCHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI----------AAGKDVKETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~----------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      .+++||+++||||++|||+++|++|++.|++|++++|+.          +.+++..+++...  +.++.++++|++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence            347899999999999999999999999999999999984          3444555555432  4467889999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcC-CCC------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438           97 VRNFASEYNIQHHQLNILINNA-GIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~a-g~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      ++++++++.+++|++|++|||| |..      .+..+.+.+++++.+++|+.+++.++++++|+|.++     ++|+||+
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-----~~g~IV~  156 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-----PGGLVVE  156 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-----CCcEEEE
Confidence            9999999999999999999999 742      334567889999999999999999999999999864     4689999


Q ss_pred             EcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          170 VSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +||..+...            ..+.++...|+++|+|+.+|+++|+.|+++.|  ||||+|+||+++|++.+
T Consensus       157 isS~~~~~~------------~~~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        157 ITDGTAEYN------------ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMML  214 (305)
T ss_pred             ECCcccccc------------CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHH
Confidence            999654321            01234567899999999999999999999999  99999999999999854

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2.1e-34  Score=253.42  Aligned_cols=193  Identities=17%  Similarity=0.189  Sum_probs=163.4

Q ss_pred             CCCCCCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHh-------CC-C---CceeEEEccC
Q 023438           25 DGIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-------IP-S---AKVDAMELDL   91 (282)
Q Consensus        25 ~~~~~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~-------~~-~---~~v~~~~~Dv   91 (282)
                      +.++++||++|||||  |+|||+++|++|+++|++|++ +|+...++....++.+.       .. +   ....++.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            346799999999999  899999999999999999998 88888887777666431       01 1   1146788899


Q ss_pred             --CC------------------HHHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHH
Q 023438           92 --SS------------------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLT  147 (282)
Q Consensus        92 --s~------------------~~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~  147 (282)
                        ++                  +++++++++++.+++|++|+||||||..    .+..+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  3489999999999999999999999742    45678899999999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC-ccchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 023438          148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDI  225 (282)
Q Consensus       148 ~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~g~~i  225 (282)
                      |+++|+|++       +|+||++||.++..               +.+++ ..|+++|+|+++|+++|+.|+++ +|  |
T Consensus       162 ~~~~p~m~~-------~G~II~isS~a~~~---------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~g--I  217 (303)
T PLN02730        162 QHFGPIMNP-------GGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYK--I  217 (303)
T ss_pred             HHHHHHHhc-------CCEEEEEechhhcC---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCC--e
Confidence            999999975       38999999987765               35544 47999999999999999999986 78  9


Q ss_pred             EEEEeeCCccccCcccc
Q 023438          226 TANSVHPGAIATNIIRH  242 (282)
Q Consensus       226 ~v~~v~Pg~v~t~~~~~  242 (282)
                      |||+|+||+++|++.+.
T Consensus       218 rVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        218 RVNTISAGPLGSRAAKA  234 (303)
T ss_pred             EEEEEeeCCccCchhhc
Confidence            99999999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-34  Score=246.13  Aligned_cols=194  Identities=26%  Similarity=0.279  Sum_probs=167.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++++|+++||||++|||+++|++|++.|++|++++|+.+ .+++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999764 345555666543  4468889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++.++++     +.++||++||.++..+     
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~-----  151 (254)
T PRK06114         82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-----GGGSIVNIASMSGIIV-----  151 (254)
T ss_pred             HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCcEEEEECchhhcCC-----
Confidence            99999999999999753  35678899999999999999999999999999875     4689999999876642     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              .+.+....|+++|+|+++++++++.|+.++|  |+||+|+||+++|++...
T Consensus       152 --------~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~  200 (254)
T PRK06114        152 --------NRGLLQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTR  200 (254)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCccccc
Confidence                    0112367899999999999999999999999  999999999999998753

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-34  Score=243.07  Aligned_cols=187  Identities=20%  Similarity=0.174  Sum_probs=166.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+++||+++||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++..+.+|++++++++++++.+.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888877654  44688899999999999999999999


Q ss_pred             cCC-CccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHH-QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g-~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++ ++|++|||||..   .+..+.+++++.+.+++|+.+++.++++++|+|.++.    ++|+||++||..+       
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~----~~g~Iv~isS~~~-------  147 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN----KKGVIVNVISHDD-------  147 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCceEEEEecCCC-------
Confidence            988 999999999853   2356778899999999999999999999999998741    3689999999542       


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                                 .+++..|+++|+|+.+|+++|+.|+.+.|  ||||+|+||+++|+.
T Consensus       148 -----------~~~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~  191 (227)
T PRK08862        148 -----------HQDLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANG  191 (227)
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCC
Confidence                       34577899999999999999999999988  999999999999994

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-34  Score=251.12  Aligned_cols=210  Identities=47%  Similarity=0.676  Sum_probs=176.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.+..++.++.++.+|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999888887777776654455788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      .++++|+||||||...+....+.++++..+++|+.+++.+++.+++.+++.     +.++||++||.++...  ...+++
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~--~~~~~~  164 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHRIR--AAIHFD  164 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHhcc--CCCCcc
Confidence            999999999999976555556778899999999999999999999999874     4579999999765431  122333


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      +.....+.++...|++||++++.|++.++.++++.|+++.+++++||+++|++.+..
T Consensus       165 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        165 DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence            333344566678999999999999999999999888556666678999999998754

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-34  Score=254.90  Aligned_cols=192  Identities=28%  Similarity=0.304  Sum_probs=172.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++|||||+|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|.++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999988888877654  45788899999999999999999998


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||+.  .+..+.+.+++++.+++|+.+++.+++.++|+|+++     +.++||+++|..+..       
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-----~~g~iV~isS~~~~~-------  148 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-----GHGIFINMISLGGFA-------  148 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhcC-------
Confidence            889999999999975  336678889999999999999999999999999985     468999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKED-GVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~-g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++..|+++|+++.+|+++|+.|+.+. |  |+|++|+||.++||+...
T Consensus       149 --------~~p~~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        149 --------AQPYAAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCccccc
Confidence                    57788899999999999999999999864 7  999999999999998754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-34  Score=247.32  Aligned_cols=186  Identities=17%  Similarity=0.168  Sum_probs=157.7

Q ss_pred             CCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++|+++||||  ++|||+++|++|++.|++|++++|... ..+..+++.+..+  ...++++|++|+++++++++.+.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            67899999996  689999999999999999999876522 2333444444432  235788999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      ++|++|++|||||....       ..+.+.++|++.+++|+.+++.++|+++|+|.+       +++||++||.++..  
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~--  151 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAER--  151 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEecccccc--
Confidence            99999999999997532       235678999999999999999999999999943       47999999977654  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                   +.+++..|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++..
T Consensus       152 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~  198 (260)
T PRK06997        152 -------------VVPNYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAAS  198 (260)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhc
Confidence                         467788999999999999999999999999  99999999999998754

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=250.92  Aligned_cols=191  Identities=26%  Similarity=0.323  Sum_probs=170.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++..   +..+..+.+|++|.++++++++++.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998887777666532   34577788999999999999999999


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++|++.+.      .++||++||.++..       
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-------  148 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFA-------  148 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcC-------
Confidence            999999999999975  345678899999999999999999999999999873      57999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.+++..|+++|+++++|+++++.|+.+.|  |+||+|+||+++|++.+..
T Consensus       149 --------~~~~~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        149 --------AAPGMAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhc
Confidence                    567888999999999999999999999999  9999999999999987653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-34  Score=247.66  Aligned_cols=187  Identities=22%  Similarity=0.252  Sum_probs=158.0

Q ss_pred             CCCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++|+++||||  ++|||+++|++|++.|++|++++|+..  .+..+++.+.. +.++.++++|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            368899999999  899999999999999999999998641  12223333333 2357789999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      ++++++|++|||||+..      +..+.+++++++.+++|+.+++.++++++|+|++       +++||++++.+. .  
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~~-~--  150 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDAT-V--  150 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeeccc-c--
Confidence            99999999999999752      3456788999999999999999999999999974       478999986432 1  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.+.+..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.+.
T Consensus       151 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~  198 (256)
T PRK07889        151 -------------AWPAYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKA  198 (256)
T ss_pred             -------------cCCccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhc
Confidence                         356788899999999999999999999999  999999999999998654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=249.51  Aligned_cols=193  Identities=26%  Similarity=0.311  Sum_probs=168.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh---------hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~---------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      +++|+++||||++|||+++|++|++.|++|++++|+.         +.+++..+++.+.  +.++.++.+|++|++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            6889999999999999999999999999999998876         5666666666543  4568889999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCccc
Q 023438          100 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHR  176 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~  176 (282)
                      +++.+.+.+|++|++|||||+..  +..+.+.++|++.+++|+.+++.++++++|+|++.... ....++||++||.++.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            99999999999999999999753  35678899999999999999999999999999864211 1124799999998776


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .               +.+++..|+++|+|+++|+++++.|++++|  ||||+|+|| ++|++..
T Consensus       162 ~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        162 Q---------------GSVGQGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             c---------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcch
Confidence            5               577889999999999999999999999999  999999999 8998764

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=240.47  Aligned_cols=192  Identities=28%  Similarity=0.379  Sum_probs=171.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||.+++++|++.|++|++++|+.+.++...+++.+.  +.++.++++|+++.++++.+++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999988888877777554  34678899999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++++++++++.     +.++|+++||..+..      
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------  150 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-----GGGSIVNVASVNGVS------  150 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCcEEEEECchhhcC------
Confidence            999999999999963   335567889999999999999999999999999874     468999999976654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.+++..|++||+++++++++++.|+.++|  |+||+|+||.++|++...
T Consensus       151 ---------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~  198 (252)
T PRK07035        151 ---------PGDFQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASA  198 (252)
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCccccc
Confidence                     567788999999999999999999999999  999999999999998664

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=241.06  Aligned_cols=195  Identities=24%  Similarity=0.257  Sum_probs=171.6

Q ss_pred             CCCCCCEEEEecCCC-hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATS-GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~-gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -.+++|+++||||+| |||.++++.|+++|++|++++|+.+.+++..+++.+.++..++.++++|++++++++++++.+.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            346789999999985 9999999999999999999999988888877777665544578899999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++|||||...  ...+.+.++|++.+++|+.+++.++++++|++....    ..++|++++|..+..      
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~~ss~~~~~------  162 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG----HGGVIVNNASVLGWR------  162 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEeCchhhcC------
Confidence            88899999999999643  356778899999999999999999999999998741    258999999977654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+|+++++++++.|++++|  |+||+|+||+++||+.+.
T Consensus       163 ---------~~~~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        163 ---------AQHGQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCccccc
Confidence                     456788999999999999999999999999  999999999999998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=246.72  Aligned_cols=191  Identities=25%  Similarity=0.354  Sum_probs=171.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999988888877777544  4568889999999999999999999999


Q ss_pred             CCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |++|++|||||..  ....+.+.+++++.+++|+.+++.++++++|.|.++    +.+++||++||.++..         
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~----~~~g~iv~isS~~~~~---------  148 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ----GTGGHVVFTASFAGLV---------  148 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCCEEEEeCChhhcc---------
Confidence            9999999999974  346678899999999999999999999999999874    1258999999987765         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.++...|+++|+++.+|+++|+.|+...|  |+|++|+||.++|++...
T Consensus       149 ------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        149 ------PNAGLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccc
Confidence                  577888999999999999999999999888  999999999999998654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=2.4e-33  Score=241.70  Aligned_cols=192  Identities=22%  Similarity=0.286  Sum_probs=166.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++||+++||||++|||.++|++|+++|++|++++++..  .+..+++.+.  +.++.++++|++|.++++++++++.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999998887542  3444555432  4468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++++++|++|||||...  +..+.+.++|++.+++|+.+++.+++++++++.++    +.+++||++||..+..      
T Consensus        81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~------  150 (253)
T PRK08993         81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ----GNGGKIINIASMLSFQ------  150 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEECchhhcc------
Confidence            99999999999999753  35678889999999999999999999999999874    1258999999987665      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+|+++++++++.|+.++|  |+||+|+||+++|++...
T Consensus       151 ---------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~  198 (253)
T PRK08993        151 ---------GGIRVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQ  198 (253)
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhh
Confidence                     466778999999999999999999999999  999999999999998754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-33  Score=242.28  Aligned_cols=189  Identities=23%  Similarity=0.306  Sum_probs=161.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+.+++|+++||||++|||+++|++|++.|++|++++++.+..   .+++.+.    ++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~   74 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVE   74 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999887664332   2233221    47889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.+++++.+++|+.+++.++++++|+++++     +.++||++||..+...     
T Consensus        75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~-----  144 (255)
T PRK06463         75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-----KNGAIVNIASNAGIGT-----  144 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHhCCC-----
Confidence            99999999999999753  35567889999999999999999999999999864     4689999999766531     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+|+++++++++.|+.+.|  |+||+|+||+++|++...
T Consensus       145 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        145 ---------AAEGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             ---------CCCCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhc
Confidence                     245677899999999999999999999988  999999999999998653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=3e-33  Score=244.27  Aligned_cols=193  Identities=27%  Similarity=0.282  Sum_probs=171.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++.++++|+++++++..+++++.
T Consensus         5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988877777776543  4468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC-----------------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEE
Q 023438          106 IQHHQLNILINNAGIMGT-----------------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  168 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~-----------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv  168 (282)
                      ++++++|++|||||...+                 ..+.+.+++++.+++|+.+++.+++++++.+.+.     +.++||
T Consensus        83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii  157 (278)
T PRK08277         83 EDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-----KGGNII  157 (278)
T ss_pred             HHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEE
Confidence            999999999999995421                 3456789999999999999999999999999875     468999


Q ss_pred             EEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          169 NVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       169 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ++||..+..               +.++...|+++|+|+++++++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       158 ~isS~~~~~---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~  214 (278)
T PRK08277        158 NISSMNAFT---------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRA  214 (278)
T ss_pred             EEccchhcC---------------CCCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhh
Confidence            999987765               567788999999999999999999999988  999999999999998653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-33  Score=248.25  Aligned_cols=240  Identities=50%  Similarity=0.677  Sum_probs=199.5

Q ss_pred             CCcccccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHH
Q 023438           18 STAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (282)
Q Consensus        18 ~~~~~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i   97 (282)
                      ..........++++++++||||++|||.++|++|+++|++|++.+|+.+..++..+++.+..+..++.++++|+++.+++
T Consensus        22 ~~~~~~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   22 TTALEVTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             eecceeeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence            33344455688999999999999999999999999999999999999999999999999876677899999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438           98 RNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus        98 ~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      .+..++++..++++|++|+|||+..++...+.|.++..|.+|+.|+|++++.++|.|+.+     .++|||++||..+ .
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----~~~RIV~vsS~~~-~  175 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----APSRIVNVSSILG-G  175 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-----CCCCEEEEcCccc-c
Confidence            999999999999999999999998777778889999999999999999999999999986     3489999999776 1


Q ss_pred             cccCCccccCCCCCCC--CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC-ccccCchhhhhhHHHh
Q 023438          178 AYHEGIRFDKINDPSG--YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN-IIRHNSLFRSMNTILH  254 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~--~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~  254 (282)
                         ..++++++.....  ......|+.||.+...+++.|++.+.. |  |.+++++||.+.|+ +.+ .      ..+..
T Consensus       176 ---~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~t~~l~r-~------~~~~~  242 (314)
T KOG1208|consen  176 ---GKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVKTTGLSR-V------NLLLR  242 (314)
T ss_pred             ---CccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCcccccceec-c------hHHHH
Confidence               2234444443322  445557999999999999999999987 7  99999999999999 555 1      11122


Q ss_pred             hhhHHhhhhcccChHHHHhhhh
Q 023438          255 ALPGIAGKCLLKNVQQVILNFQ  276 (282)
Q Consensus       255 ~~p~~~~~~~~~~~~~~~~~~~  276 (282)
                      .+-..+...+.++++.++.+..
T Consensus       243 ~l~~~l~~~~~ks~~~ga~t~~  264 (314)
T KOG1208|consen  243 LLAKKLSWPLTKSPEQGAATTC  264 (314)
T ss_pred             HHHHHHHHHhccCHHHHhhhee
Confidence            2444555556678888887743

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=240.21  Aligned_cols=192  Identities=23%  Similarity=0.309  Sum_probs=171.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            5578999999999999999999999999999999999988888877777554  34678899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  +..+.+.++|++.+++|+.+++.+++++.+++.++     +.++||++||..+..       
T Consensus        83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  150 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-----QAGKIINICSMQSEL-------  150 (254)
T ss_pred             hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccchhcc-------
Confidence            9999999999999653  35678899999999999999999999999999764     458999999976654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+++++++++++.|++++|  |+||+|+||+++|++...
T Consensus       151 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        151 --------GRDTITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhh
Confidence                    467788999999999999999999999999  999999999999998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=240.33  Aligned_cols=193  Identities=27%  Similarity=0.314  Sum_probs=172.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.+++|+++||||++|||.++|++|++.|++|++++|+.+..++..+++.+.  +.++.++.+|+++.+++.++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999998887777776554  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||...   +..+.+.+++++.+++|+.+++.++++++|++.++     +.+++|++||..+..      
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~------  149 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-----GGGAIVNTASVAGLG------  149 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcc------
Confidence            9999999999999743   24567889999999999999999999999999875     457999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.+++..|+++|+++++|+++++.|+.+.|  |+|++|+||.++|++++..
T Consensus       150 ---------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        150 ---------AAPKMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhh
Confidence                     567888999999999999999999999888  9999999999999997653

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.7e-33  Score=247.50  Aligned_cols=203  Identities=45%  Similarity=0.626  Sum_probs=170.4

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.      ++.++.+|++|.++++++++++
T Consensus        20 ~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~   93 (315)
T PRK06196         20 AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERF   93 (315)
T ss_pred             cCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHH
Confidence            3467889999999999999999999999999999999999887766655542      3778999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ...++++|+||||||......+.+.++++..+++|+.+++.++++++|.+.+.     +.++||++||.++..+   ...
T Consensus        94 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~---~~~  165 (315)
T PRK06196         94 LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-----AGARVVALSSAGHRRS---PIR  165 (315)
T ss_pred             HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEECCHHhccC---CCC
Confidence            98889999999999976554556778899999999999999999999999874     3579999999754332   112


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      ++......+.++...|++||++++.+++.++.++...|  |+|++|+||++.|++.+..
T Consensus       166 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~  222 (315)
T PRK06196        166 WDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHL  222 (315)
T ss_pred             ccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccC
Confidence            22222233456677899999999999999999999888  9999999999999987654

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=5.4e-33  Score=244.79  Aligned_cols=188  Identities=28%  Similarity=0.288  Sum_probs=162.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++|++|||||++|||+++|++|++.|++|++++|+.  +..++..+.+.+ . +.++.++.+|+++.+++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-C-GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-c-CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999988653  233443333332 2 4468889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ..++++|++|||||..   .+..+.+.++|++.+++|+.+++.++++++|+|.+       .++||++||..+..     
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~-----  191 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQ-----  191 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhcc-----
Confidence            9999999999999964   33567889999999999999999999999999864       47999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|+|+++++++++.|++++|  |+||+|+||+++|++..
T Consensus       192 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~  238 (294)
T PRK07985        192 ----------PSPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQI  238 (294)
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCcccccc
Confidence                      467788999999999999999999999999  99999999999999854

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=247.73  Aligned_cols=220  Identities=24%  Similarity=0.274  Sum_probs=179.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +.+.+++++++||||+||||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|.+++.++++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            357789999999999999999999999999999999999998888777776543  446889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC--CCc--CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          105 NIQHHQLNILINNAGIMGT--PFM--LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~--~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .+.++++|++|||||....  ..+  .++++++..+++|+.+++.++++++|++++.     +.++||++||.++...  
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~--  184 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-----GDGHIINVATWGVLSE--  184 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcCC--
Confidence            9999999999999997532  222  2457888999999999999999999999875     4689999999654321  


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHh
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA  260 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~  260 (282)
                                  +.++...|+++|+|+++++++++.|+...|  |+|++|+||.++|+++........   .....|+.+
T Consensus       185 ------------~~p~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~~~~~~~---~~~~~pe~v  247 (293)
T PRK05866        185 ------------ASPLFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAPTKAYDG---LPALTADEA  247 (293)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCccccccccccC---CCCCCHHHH
Confidence                        246678999999999999999999999888  999999999999999864322111   112356666


Q ss_pred             hhhcccChHH
Q 023438          261 GKCLLKNVQQ  270 (282)
Q Consensus       261 ~~~~~~~~~~  270 (282)
                      ++.+....++
T Consensus       248 A~~~~~~~~~  257 (293)
T PRK05866        248 AEWMVTAART  257 (293)
T ss_pred             HHHHHHHHhc
Confidence            6655554443

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-33  Score=241.89  Aligned_cols=212  Identities=15%  Similarity=0.211  Sum_probs=176.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||++|||+++|++|+ +|++|++++|+.+.+++..+++.+.. +..+.++++|++|+++++++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 59999999999999988888886542 2357889999999999999999999989999


Q ss_pred             cEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||||....  ..+.+.+++.+.+++|+.+++.+++.++|.|.++.    .+|+||++||.++..            
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~----~~g~Iv~isS~~~~~------------  142 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT----APAAIVAFSSIAGWR------------  142 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC----CCCEEEEEecccccc------------
Confidence            999999997543  33566777888899999999999999999998641    258999999987765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhcccChH
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQ  269 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  269 (282)
                         +.++...|+++|+|+++|+++|+.|+.+.|  |+||+|+||+++|++........     ....|+.+++.++....
T Consensus       143 ---~~~~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~~~~~~-----~~~~pe~~a~~~~~~~~  212 (246)
T PRK05599        143 ---ARRANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTGMKPAP-----MSVYPRDVAAAVVSAIT  212 (246)
T ss_pred             ---CCcCCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcCCCCCC-----CCCCHHHHHHHHHHHHh
Confidence               467788999999999999999999999888  99999999999999875432111     01356777777766655


Q ss_pred             HH
Q 023438          270 QV  271 (282)
Q Consensus       270 ~~  271 (282)
                      +.
T Consensus       213 ~~  214 (246)
T PRK05599        213 SS  214 (246)
T ss_pred             cC
Confidence            43

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=7.5e-33  Score=238.97  Aligned_cols=197  Identities=27%  Similarity=0.314  Sum_probs=176.7

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....++.++.++.+|++++++++.+++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999888888877776655668999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ...++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||.++..     
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~-----  152 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-----ASSAIVNIGSVSGLT-----  152 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCceEEEECccccCC-----
Confidence            99999999999999974  235577899999999999999999999999999875     457999999987665     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|++++.++++++.|+.+.|  |+||+|+||+++|++.+..
T Consensus       153 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~~  201 (257)
T PRK09242        153 ----------HVRSGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSGP  201 (257)
T ss_pred             ----------CCCCCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCcccccc
Confidence                      467788999999999999999999999888  9999999999999997643

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=239.40  Aligned_cols=188  Identities=29%  Similarity=0.365  Sum_probs=162.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh-
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~-  106 (282)
                      +++|+++||||++|||.++|++|++.|++|++.+ |+.+..++..+++.+.  +.++.++.+|+++.++++.+++++.+ 
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 5666666666666543  44678899999999999998888765 


Q ss_pred             ---cCC--CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 ---QHH--QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ---~~g--~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                         .++  ++|++|||||+..  +..+.+.++|++++++|+.+++.++++++|.|++       .++||++||.++..  
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~--  150 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRI--  150 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCccccc--
Confidence               334  8999999999743  3567788999999999999999999999999965       47999999987765  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|++||+|+++++++++.|+.++|  |+||+|+||+++|++...
T Consensus       151 -------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        151 -------------SLPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhh
Confidence                         467788999999999999999999999999  999999999999998654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=242.55  Aligned_cols=187  Identities=24%  Similarity=0.306  Sum_probs=165.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|++.|++|++++|+.+.+++..+++     +.++.++++|++++++++++++.+...
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999987666655544     346889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          108 HHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      ++++|++|||||.... ..+.+.++|++.+++|+.+++.++++++++|.+      +.++||++||.++..         
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~g~ii~isS~~~~~---------  142 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLAR------GGGAIVNFTSISAKF---------  142 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc------CCcEEEEECchhhcc---------
Confidence            9999999999997532 345688999999999999999999999999973      468999999987765         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.++...|+++|+++++++++++.|+.+.|  |+||+|+||+++|++...
T Consensus       143 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        143 ------AQTGRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhh
Confidence                  467788999999999999999999999988  999999999999998654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-33  Score=239.77  Aligned_cols=191  Identities=26%  Similarity=0.335  Sum_probs=167.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||.+++++|+++|++|++++|+ ...++..+.+.+.  +.++.++.+|+++.++++.+++++.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            55789999999999999999999999999999999998 4555555544432  35688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++++++++     +.++||++||..+..       
T Consensus        88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-------  155 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-----GSGKIINIASMLSFQ-------  155 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-----CCeEEEEECCHHhcc-------
Confidence            9999999999999753  35567889999999999999999999999999875     468999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+....|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       156 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        156 --------GGKFVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             --------CCCCchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhh
Confidence                    466788999999999999999999999988  999999999999998654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.3e-32  Score=237.38  Aligned_cols=193  Identities=28%  Similarity=0.386  Sum_probs=171.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++.+++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.+++.++++.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999988877777766543  4468889999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          106 IQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +.++++|++|||||.... ..+.+.+++++.+++|+.+++.+++++++++.+.     +.++||++||.++..       
T Consensus        84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  151 (255)
T PRK06113         84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN-------  151 (255)
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCcEEEEEecccccC-------
Confidence            889999999999997533 3467889999999999999999999999999764     457999999977665       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+|+++++++++.++.+.|  |+||+|+||.++|++...
T Consensus       152 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~  199 (255)
T PRK06113        152 --------KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKS  199 (255)
T ss_pred             --------CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeccccccccccc
Confidence                    567788999999999999999999999988  999999999999998764

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.2e-33  Score=249.83  Aligned_cols=191  Identities=25%  Similarity=0.292  Sum_probs=161.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC--HHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS--LASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~--~~~i~~~~~~i~~  106 (282)
                      ..|++++|||||+|||+++|++|+++|++|++++|+.+.+++..+++.+.+++.++..+.+|+++  .+.++.+.+.+. 
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~-  129 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE-  129 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc-
Confidence            45899999999999999999999999999999999999999988888777655678889999985  233444444332 


Q ss_pred             cCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                       ..++|++|||||+..    ...+.+.+++++.+++|+.+++.++++++|.|.++     +.|+||++||.++...    
T Consensus       130 -~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~----  199 (320)
T PLN02780        130 -GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIINIGSGAAIVI----  199 (320)
T ss_pred             -CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccC----
Confidence             125779999999753    25578889999999999999999999999999875     5789999999877531    


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               .+.|....|++||+++++|+++|+.|+++.|  |+|++|+||+++|++..
T Consensus       200 ---------~~~p~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        200 ---------PSDPLYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ---------CCCccchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCccc
Confidence                     0246788999999999999999999999999  99999999999999876

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=239.02  Aligned_cols=194  Identities=24%  Similarity=0.316  Sum_probs=173.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|+++||||++|||.++|++|++.|++|++++|+.+.+++..+.+.+.  +.++.++++|++++++++.+++++.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988887777776543  4478899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++++|.+.     +.++||++||..+..      
T Consensus        83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------  151 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-----GHGKIINICSMMSEL------  151 (265)
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCccccC------
Confidence            99999999999999753  35678889999999999999999999999999874     468999999976654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|+++++++++++.|+.+.|  |+||+|+||.++|++....
T Consensus       152 ---------~~~~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  200 (265)
T PRK07097        152 ---------GRETVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAPL  200 (265)
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhhh
Confidence                     467788999999999999999999999998  9999999999999986543

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=5.9e-33  Score=240.06  Aligned_cols=179  Identities=27%  Similarity=0.291  Sum_probs=160.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|++.|++|++++|+...             ..++.++++|++|+++++++++++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998543             125788999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||..  .+..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..        
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  136 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-----DKGVIINIASVQSFA--------  136 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEeCcchhcc--------
Confidence            99999999999974  345678899999999999999999999999999875     468999999987664        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+|+++++++++.|+.+ +  |+||+|+||+++|++...
T Consensus       137 -------~~~~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        137 -------VTRNAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             -------CCCCCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhh
Confidence                   5678889999999999999999999975 3  999999999999998654

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=8.7e-33  Score=241.56  Aligned_cols=191  Identities=26%  Similarity=0.295  Sum_probs=167.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   +.++.++++|++|.++++++++.+.
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999987766665555421   3468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          106 IQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.++++|+||||||...    ...+.+.+++++++++|+.+++.+++++++++.+.     ++++|++++|..+..    
T Consensus        90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~----  160 (280)
T PLN02253         90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-----KKGSIVSLCSVASAI----  160 (280)
T ss_pred             HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCceEEEecChhhcc----
Confidence            99999999999999753    24567889999999999999999999999999764     468999999987765    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                 +.++...|+++|+|+++++++++.|+...|  |+||+|+||.++|++..
T Consensus       161 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        161 -----------GGLGPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALAL  207 (280)
T ss_pred             -----------cCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccc
Confidence                       355667899999999999999999999988  99999999999999754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=235.72  Aligned_cols=192  Identities=27%  Similarity=0.357  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.+.  +.++.++++|++|+++++++++.+..
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777666543  45688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++.+++.++     +.++||++||..+..       
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~-------  151 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-----GAGKIINIASVQSAL-------  151 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEEccchhcc-------
Confidence            9999999999999753  35677889999999999999999999999999875     468999999976554       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++..|+++|++++.++++++.|++++|  |+||+|+||+++|++.+.
T Consensus       152 --------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~  199 (255)
T PRK07523        152 --------ARPGIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAA  199 (255)
T ss_pred             --------CCCCCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhh
Confidence                    567788999999999999999999999999  999999999999998654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.5e-33  Score=221.35  Aligned_cols=184  Identities=28%  Similarity=0.296  Sum_probs=166.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |.+.|.++|||||++|||+++|++|.+.|-+||+++|+++.+++..++.      ..++...||+.|.++++++++.++.
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHh
Confidence            3567899999999999999999999999999999999999988876653      3688899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++.++++|||||+....    .+...++.++.+.+|+.++..+++.++|++.++     +.+.||++||+.+..     
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-----~~a~IInVSSGLafv-----  144 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-----PEATIINVSSGLAFV-----  144 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-----CCceEEEeccccccC-----
Confidence            999999999999986542    234556678889999999999999999999986     578999999998877     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                                |....+.|+++|+|++.++.+|+..++..+  |.|-.+.|..|+|+
T Consensus       145 ----------Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         145 ----------PMASTPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             ----------cccccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence                      678889999999999999999999999888  99999999999997

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-32  Score=235.26  Aligned_cols=190  Identities=26%  Similarity=0.337  Sum_probs=163.8

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcC-----------hhhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRD-----------IAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~-----------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      +++||+++||||+  +|||.++|++|+++|++|++++|+           .....+..+++.+.  +.++.++++|+++.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5789999999999  499999999999999999988643           22223333444432  45788999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ++++++++++.+.++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++|.+.+.     +.++||++||
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS  155 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-----SGGRIINMTS  155 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----CCeEEEEEcc
Confidence            999999999999999999999999965  335678999999999999999999999999999864     4689999999


Q ss_pred             CcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          173 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ..+..               +.+++..|+++|+++++|+++++.|+.++|  |+||+|+||+++|+++.
T Consensus       156 ~~~~~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~  207 (256)
T PRK12859        156 GQFQG---------------PMVGELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMT  207 (256)
T ss_pred             cccCC---------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCC
Confidence            87654               577889999999999999999999999988  99999999999999754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=238.49  Aligned_cols=185  Identities=24%  Similarity=0.264  Sum_probs=160.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||+++|++|++.|++|++++|+.+.++...+++     +.++.++++|++++++++.+++++.+.
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            368899999999999999999999999999999999987766554443     346888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhh----HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDN----IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++++|++|||||+..   +..+.+.++    |++++++|+.+++.++++++|.+++.      +++||+++|.++..   
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~---  148 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFY---  148 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcC---
Confidence            999999999999743   233455554    88899999999999999999998763      58999999987765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                  +.++...|+++|+|+++|+++++.|+++ +  ||||+|+||+++|++..
T Consensus       149 ------------~~~~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        149 ------------PGGGGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcC
Confidence                        4567789999999999999999999987 4  99999999999999865

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2.8e-32  Score=234.01  Aligned_cols=190  Identities=26%  Similarity=0.323  Sum_probs=163.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||.++|++|+++|++|++++|+..  .+..+.+.+.  +.++.++.+|+++++++..+++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999752  3334444332  346889999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||....  ..+.+.+++++.+++|+.+++.+++++++++.++.    ..++||++||..+..        
T Consensus        78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~--------  145 (248)
T TIGR01832        78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG----RGGKIINIASMLSFQ--------  145 (248)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEecHHhcc--------
Confidence            8999999999997533  45678899999999999999999999999998641    257999999977654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.+....|+++|+++++++++++.|+.++|  |+||+|+||+++|++.+.
T Consensus       146 -------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       146 -------GGIRVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQA  193 (248)
T ss_pred             -------CCCCCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhc
Confidence                   355677899999999999999999999988  999999999999998654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=239.55  Aligned_cols=189  Identities=27%  Similarity=0.345  Sum_probs=168.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++++++|||||||||++++++|++.|++|++++|+.+.+++..+++.      ++.++.+|++|+++++++++.+..
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999877666555441      477899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  ...+.+.+++++++++|+.+++.+++.++|++.++     +.++||++||.++..       
T Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-------  142 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-----GRGHVVNVASLAGKI-------  142 (273)
T ss_pred             HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEcCccccC-------
Confidence            8999999999999753  35567889999999999999999999999999885     568999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|+++++++++++.|+.+.|  |++++|+||+++|++....
T Consensus       143 --------~~~~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        143 --------PVPGMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhccc
Confidence                    577889999999999999999999999888  9999999999999987643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=4e-32  Score=234.78  Aligned_cols=187  Identities=26%  Similarity=0.258  Sum_probs=161.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.. ..+..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4478899999999999999999999999999999999853 44555555443  44688899999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++.++|++.+.     +.++||++||..+..      
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~------  149 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-----GGGAIVNVSSIATRG------  149 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEcCccccC------
Confidence            999999999999953   345678899999999999999999999999999875     457999999975431      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                                 ....+|+++|+|+++|+++++.|++++|  |+||+|+||+++||+.
T Consensus       150 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~  193 (260)
T PRK12823        150 -----------INRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPR  193 (260)
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcch
Confidence                       2346799999999999999999999988  9999999999999963

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-33  Score=241.34  Aligned_cols=218  Identities=22%  Similarity=0.237  Sum_probs=174.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-------HHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence            45789999999999999999999999999999999998653       33444444433  4578899999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          100 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +++++.+.++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|+|.++     ++++|+++||..+..
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~  154 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-----ENPHILTLSPPLNLD  154 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-----CCCEEEEECCchhcc
Confidence            99999988999999999999743  35677889999999999999999999999999875     467999999865443


Q ss_pred             cccCCccccCCCCCCCC--CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-ccccCccccCchhhhhhHHHh
Q 023438          178 AYHEGIRFDKINDPSGY--NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRHNSLFRSMNTILH  254 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~--~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~~~~~~~~~~~~~  254 (282)
                                     +.  +++..|+++|+++++++++++.|+.+.|  |+||+|+|| .++|++.+....... .....
T Consensus       155 ---------------~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~~~~~~~-~~~~~  216 (273)
T PRK08278        155 ---------------PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRNLLGGDE-AMRRS  216 (273)
T ss_pred             ---------------ccccCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHhcccccc-ccccc
Confidence                           23  6788999999999999999999999988  999999999 689987554311110 00112


Q ss_pred             hhhHHhhhhcccChH
Q 023438          255 ALPGIAGKCLLKNVQ  269 (282)
Q Consensus       255 ~~p~~~~~~~~~~~~  269 (282)
                      ..|+.+++.+.....
T Consensus       217 ~~p~~va~~~~~l~~  231 (273)
T PRK08278        217 RTPEIMADAAYEILS  231 (273)
T ss_pred             CCHHHHHHHHHHHhc
Confidence            355566665554433

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-32  Score=233.71  Aligned_cols=194  Identities=28%  Similarity=0.340  Sum_probs=167.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++++|+++||||++|||.++|++|+++|++|++++|+. +......+++...  +.++.++.+|++|.+++.++++.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~   79 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTA   79 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHH
Confidence            3458899999999999999999999999999999988854 4455555566443  456888999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.++++|++|||||....  ..+.+.+++++.+++|+.+++.+++++++++.+..    .+++||++||..+..     
T Consensus        80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~----~~g~iv~~sS~~~~~-----  150 (261)
T PRK08936         80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD----IKGNIINMSSVHEQI-----  150 (261)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEEccccccC-----
Confidence            9999999999999997533  45678899999999999999999999999998751    358999999976554     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.+++..|+++|+|+++++++++.|+.+.|  |+||+|+||+++|++...
T Consensus       151 ----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        151 ----------PWPLFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAE  198 (261)
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCcccc
Confidence                      577888999999999999999999999988  999999999999998653

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=245.22  Aligned_cols=193  Identities=23%  Similarity=0.229  Sum_probs=172.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++++++||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++.+.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3478899999999999999999999999999999999998888887777654  45788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++++++++     +.++||++||..+..       
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-----~~g~iV~isS~~~~~-------  149 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-----DRGAIIQVGSALAYR-------  149 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEeCChhhcc-------
Confidence            999999999999964  345678999999999999999999999999999875     468999999988765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.+.+..|+++|+++++|+++++.|+...+.+|+|++|+||.++||+..
T Consensus       150 --------~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        150 --------SIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence                    4677889999999999999999999986544599999999999999765

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.3e-32  Score=236.02  Aligned_cols=190  Identities=25%  Similarity=0.326  Sum_probs=163.2

Q ss_pred             EEEEecCCChhHHHHHHHHHH----cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~----~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++||||++|||+++|++|++    .|++|++++|+.+.+++..+++....++.++.++.+|+++.++++.+++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999888888888764445578899999999999999999998876


Q ss_pred             CC----ccEEEEcCCCCCC----CCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          109 HQ----LNILINNAGIMGT----PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       109 g~----id~vi~~ag~~~~----~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +.    .|++|||||....    ..+ .+.+++++.+++|+.+++.++++++|.|.++.   +.+++||++||.++..  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~--  156 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQ--  156 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCC--
Confidence            64    2699999997532    122 24688999999999999999999999998641   1247999999987654  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.+++..|+++|+|+++|+++|+.|+.+.|  |+||+|+||+++|++.+.
T Consensus       157 -------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       157 -------------PFKGWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHHH
Confidence                         577888999999999999999999999888  999999999999998653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-32  Score=234.53  Aligned_cols=189  Identities=26%  Similarity=0.348  Sum_probs=166.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.+.. +.++.++.+|++++++++.+++.  
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH--
Confidence            356789999999999999999999999999999999999888887777776543 34688899999999999888765  


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        ++++|++|||||...  ++.+.+.++|+..+++|+.+++.++++++|.|.++     +.++||++||..+..      
T Consensus        79 --~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~iss~~~~~------  145 (259)
T PRK06125         79 --AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-----GSGVIVNVIGAAGEN------  145 (259)
T ss_pred             --hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEecCccccC------
Confidence              478999999999753  36678999999999999999999999999999874     457999999976654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.+++..|+++|+|+++++++++.|+.+.|  |+||+|+||+++|+++.
T Consensus       146 ---------~~~~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~  192 (259)
T PRK06125        146 ---------PDADYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRML  192 (259)
T ss_pred             ---------CCCCchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHH
Confidence                     466788899999999999999999999999  99999999999999754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.4e-32  Score=238.11  Aligned_cols=187  Identities=22%  Similarity=0.277  Sum_probs=158.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+    .+ +.++.++.+|+++.+++.++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AH-GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hc-CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998776555432    22 34688899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSK----DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      .++++|++|||||...   +..+.+.    ++|++.+++|+.+++.++++++|++.+.      ++++|+++|..+..  
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~--  147 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFY--  147 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceec--
Confidence            9999999999999642   2223332    4789999999999999999999999763      47899999977665  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|+++|+|+++|+++++.|+++ .  ||||+|+||+++|++...
T Consensus       148 -------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~-~--irvn~i~PG~i~t~~~~~  194 (262)
T TIGR03325       148 -------------PNGGGPLYTAAKHAVVGLVKELAFELAP-Y--VRVNGVAPGGMSSDLRGP  194 (262)
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHhhcc-C--eEEEEEecCCCcCCCccc
Confidence                         4567789999999999999999999986 3  999999999999998653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.1e-32  Score=241.71  Aligned_cols=189  Identities=26%  Similarity=0.318  Sum_probs=164.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh--hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++|++|||||++|||+++|++|+++|++|++++++.+  ..++..+.+.+.  +.++.++.+|+++.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            378899999999999999999999999999999887643  334444444433  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +.++++|+||||||..   .+..+.+.+++++.+++|+.+++.++++++|+|.+       +++||++||..++.     
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~-----  197 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQ-----  197 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccC-----
Confidence            9999999999999964   23567889999999999999999999999999864       47999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.++...|+++|+|+++|+++|+.|+.++|  |+||+|+||+++|++...
T Consensus       198 ----------~~~~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~  245 (300)
T PRK06128        198 ----------PSPTLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPS  245 (300)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCccc
Confidence                      467788999999999999999999999999  999999999999998653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-32  Score=236.06  Aligned_cols=185  Identities=21%  Similarity=0.202  Sum_probs=164.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  + ++.++++|++|+++++++++++.++++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--G-EVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--C-CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999998888887777542  2 688899999999999999999999999999


Q ss_pred             EEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          113 ILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       113 ~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +||||||...    +..+.+.++|.+.+++|+.+++.+++++++.+.+.    .++|+||++||.++..           
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~----~~~g~iv~isS~~~~~-----------  143 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK----KMKGVLVYLSSVSVKE-----------  143 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc----CCCCEEEEEeCcccCC-----------
Confidence            9999999642    24567888999999999999999999999998642    1468999999987654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                          +.++...|+++|+|+.+++++|+.|+.++|  |+||+|+||+++|++.+
T Consensus       144 ----~~~~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        144 ----PMPPLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHH
Confidence                467788999999999999999999999999  99999999999999875

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.9e-32  Score=233.68  Aligned_cols=189  Identities=25%  Similarity=0.330  Sum_probs=167.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++||||++|||.+++++|+++|++|++++|+.+.++...+++.+.  +.++.++++|++++++++++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988887777777543  456888999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||...  +..+.+.+++++.+++|+.+++.+++.+++.+++..    ..++||++||..+..           
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~-----------  144 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG----HGGKIINATSQAGVV-----------  144 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCEEEEECcccccc-----------
Confidence            999999999743  355678899999999999999999999999997641    247999999977665           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.++...|+++|++++.+++.++.|+.+.|  |+||+|+||+++|+++..
T Consensus       145 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        145 ----GNPELAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhH
Confidence                466788999999999999999999999998  999999999999998754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=2.2e-33  Score=228.21  Aligned_cols=191  Identities=26%  Similarity=0.327  Sum_probs=171.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||.+++|||.||||++++++|+++|..+.++..+.+. .+...++++.+|..++.+++|||++..+++..++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            46789999999999999999999999999988877777666 55577788888899999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      .+|.+|++||+||+.      ++.+|++.+++|+.|...-+...+|+|.+..  .+.+|-||++||..|..         
T Consensus        80 ~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~--gG~GGiIvNmsSv~GL~---------  142 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKKQ--GGKGGIIVNMSSVAGLD---------  142 (261)
T ss_pred             HhCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhhc--CCCCcEEEEeccccccC---------
Confidence            999999999999974      4677999999999999999999999999862  24578999999988876         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            |.|-++.|++||+++.+|+++|+..  +.+.|  |++++||||++.|.+..+.
T Consensus       143 ------P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sG--V~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  143 ------PMPVFPVYAASKAGVVGFTRSLADLAYYQRSG--VRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             ------ccccchhhhhcccceeeeehhhhhhhhHhhcC--EEEEEECCCcchHHHHHHH
Confidence                  7999999999999999999999886  45668  9999999999999987654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3.4e-32  Score=232.00  Aligned_cols=222  Identities=25%  Similarity=0.324  Sum_probs=195.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .....+|.|+|||+-+|+|..+|++|.++|+.|++.+.+++..+.+..+..    +.+...++.||+++++++++.+.++
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999988877666655543    3467888999999999999999988


Q ss_pred             hcC--CCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          106 IQH--HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       106 ~~~--g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.  ..+..||||||+.   ++.+-.+.+++++++++|+.|++.++++++|++++.      +||||++||..|..   
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~---  170 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRV---  170 (322)
T ss_pred             HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCc---
Confidence            754  3599999999965   345567889999999999999999999999999984      89999999999877   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHh
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA  260 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~  260 (282)
                                  +.|..++|++||+|++.|+.+|++|+.++|  |.|..|.||++.|++.......+.++..|.++|...
T Consensus       171 ------------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~~~~~~~~~~~~w~~l~~e~  236 (322)
T KOG1610|consen  171 ------------ALPALGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLANPEKLEKRMKEIWERLPQET  236 (322)
T ss_pred             ------------cCcccccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCChHHHHHHHHHHHhcCCHHH
Confidence                        588899999999999999999999999999  999999999999999987778888999999999999


Q ss_pred             hhhcccChHHHHhh
Q 023438          261 GKCLLKNVQQVILN  274 (282)
Q Consensus       261 ~~~~~~~~~~~~~~  274 (282)
                      .+.+++.--+..++
T Consensus       237 k~~YGedy~~~~~~  250 (322)
T KOG1610|consen  237 KDEYGEDYFEDYKK  250 (322)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88888775555544

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.2e-31  Score=231.24  Aligned_cols=189  Identities=28%  Similarity=0.284  Sum_probs=164.3

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++++++||+++||||++|||+++|++|+++|++|++++|+.....+..+++     +.++.++++|+++.+++.++++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999876655544332     346889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          105 NIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .++++++|++|||||...    +..+.+.+++++.+++|+.+++.+++++.|+|.+.      .++||++||..+..   
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~---  149 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQ---  149 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcC---
Confidence            999999999999999753    24467889999999999999999999999999763      57999999987665   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.+....|+++|+++++++++++.++.. +  ++||+|+||+++|++...
T Consensus       150 ------------~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~  196 (255)
T PRK05717        150 ------------SEPDTEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQ  196 (255)
T ss_pred             ------------CCCCCcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCcccc
Confidence                        4567789999999999999999999875 4  999999999999997543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-32  Score=233.41  Aligned_cols=193  Identities=28%  Similarity=0.390  Sum_probs=172.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.+.++...+++.+.  +.++.++.+|+++++++..+++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            56689999999999999999999999999999999999988877777777553  4468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++++++.+.++     +.+++|++||..+..      
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~------  152 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-----GYGRIIAITSIAGQV------  152 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEeechhcc------
Confidence            99999999999999753  35677889999999999999999999999999775     468999999987665      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++++++.++.|+.+.|  ++||+|+||.++|++.+.
T Consensus       153 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        153 ---------ARAGDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAA  200 (256)
T ss_pred             ---------CCCCccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhh
Confidence                     567788999999999999999999999888  999999999999998654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-32  Score=255.80  Aligned_cols=186  Identities=26%  Similarity=0.334  Sum_probs=166.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ...||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++..+.+|++|+++++++++++.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987776665543     346778999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +|++|++|||||...   +..+.+.++|++++++|+.++++++++++|+|.       +.++||++||.++..       
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~g~iv~isS~~~~~-------  406 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-------QGGVIVNLGSIASLL-------  406 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-------cCCEEEEECchhhcC-------
Confidence            999999999999752   356788999999999999999999999999993       368999999988765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+++++|+++|+.|+.++|  |+||+|+||+++|++.+.
T Consensus       407 --------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        407 --------ALPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhh
Confidence                    577889999999999999999999999999  999999999999998754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=237.55  Aligned_cols=197  Identities=32%  Similarity=0.356  Sum_probs=167.5

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .+..+++||+++||||++|||+++|++|+++|++|++.+++ ....++..+++...  +.++.++.+|++|+++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~   82 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVA   82 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            34577899999999999999999999999999999999875 34556666666543  4578899999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCeEEEEcCCccccc
Q 023438          103 EYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS--GGEGRIINVSSEGHRLA  178 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~--~~~g~iv~vsS~~~~~~  178 (282)
                      .+.+ +|++|++|||||+...  ..+.+.++++..+++|+.+++.+++++.++|+++.+..  ...|+||++||.++.. 
T Consensus        83 ~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-  160 (306)
T PRK07792         83 TAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-  160 (306)
T ss_pred             HHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-
Confidence            9988 9999999999997643  45678899999999999999999999999997642211  1247999999987665 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                    +.++...|+++|+++++|++.++.|+.++|  |+||+|+||. .|++..
T Consensus       161 --------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg~-~t~~~~  206 (306)
T PRK07792        161 --------------GPVGQANYGAAKAGITALTLSAARALGRYG--VRANAICPRA-RTAMTA  206 (306)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCCC-CCchhh
Confidence                          466788999999999999999999999999  9999999994 888754

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-31  Score=256.28  Aligned_cols=195  Identities=31%  Similarity=0.344  Sum_probs=174.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ...++++++|||||+||||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998888877777554  4478999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.+|++|++|||||+..  ...+.+.+++++++++|+.+++.++++++|+|.++    +.+|+||++||.++..      
T Consensus       388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~------  457 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER----GTGGHIVNVASAAAYA------  457 (582)
T ss_pred             HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEECChhhcc------
Confidence            99999999999999753  35678899999999999999999999999999875    1258999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++++++|+.|+.+.|  |+|++|+||+++|++.+..
T Consensus       458 ---------~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        458 ---------PSRSLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             ---------CCCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhcc
Confidence                     567889999999999999999999999998  9999999999999987764

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=229.12  Aligned_cols=186  Identities=22%  Similarity=0.228  Sum_probs=162.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ||+++||||++|||.+++++|++.|++|++++|+...+++..+++.+.  +.++.++++|++++++++++++++...+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999988777776666543  346889999999999999999999999999


Q ss_pred             ccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||..  .+..+.+.++|++.+++|+.+++.++++++++|.+..    .+++||++||..+..           
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~ii~isS~~~~~-----------  143 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG----IKGNIINMVATYAWD-----------  143 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC----CCEEEEEEcChhhcc-----------
Confidence            99999999963  3456788999999999999999999999999987531    358999999987654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNI  239 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~  239 (282)
                          +.++...|+++|+|+++|+++|+.|+.+ +|  |+||+|+||+++|+.
T Consensus       144 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~  189 (252)
T PRK07677        144 ----AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTG  189 (252)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeeccccccc
Confidence                4567789999999999999999999975 68  999999999999643

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-31  Score=231.94  Aligned_cols=183  Identities=31%  Similarity=0.359  Sum_probs=161.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||+||||++++++|+++|++|++++|+.+.+++..    +    .++.++.+|++|+++++.+++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999976654332    1    247889999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|++|||||...  +..+.+.++++..+++|+.+++.+++.++|.+++.     +.++||++||..+..         
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~---------  138 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSMGGKI---------  138 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcC---------
Confidence            99999999999753  35677899999999999999999999999999875     467999999976654         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                            +.+....|+++|+++++++++++.|+.+.|  |+|++|+||+++|++..
T Consensus       139 ------~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~  185 (273)
T PRK06182        139 ------YTPLGAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGD  185 (273)
T ss_pred             ------CCCCccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccch
Confidence                  356667899999999999999999999988  99999999999999753

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-31  Score=235.01  Aligned_cols=198  Identities=25%  Similarity=0.247  Sum_probs=170.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++++++|||||+||||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988877777776543  446888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++++|+||||||....  ..+.+.++++..+++|+.+++.++++++|+|.++... ....++||++||.++..       
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  153 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-------  153 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence            9999999999997543  4567889999999999999999999999999875321 01127999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++.+.|+++|+++++++++++.|+...+..||+++|+||+++|++...
T Consensus       154 --------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        154 --------APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence                    45677899999999999999999999865555999999999999998754

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=231.86  Aligned_cols=192  Identities=23%  Similarity=0.343  Sum_probs=167.0

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |+++++|+++|||||++|||+++|++|+++|++|++++|+.... +..+++.+.  +.++.++.+|++++++++++++++
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   77 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQT   77 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998766 555666544  456899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ...++++|++|||||.... ..+.+.++++..+++|+.+++.+++.+++++++      ..++|+++||..+..      
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~------  145 (258)
T PRK08628         78 VAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKA------SRGAIVNISSKTALT------  145 (258)
T ss_pred             HHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhc------cCcEEEEECCHHhcc------
Confidence            9999999999999996432 233344889999999999999999999999876      357999999977765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++++++.++.|+..+|  |+||+|+||.++|++.+.
T Consensus       146 ---------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        146 ---------GQGGTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHHH
Confidence                     466788999999999999999999999888  999999999999998653

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-32  Score=232.89  Aligned_cols=188  Identities=26%  Similarity=0.330  Sum_probs=164.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  + ++.++.+|++|++++.++++++.++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999987766655544321  2 6889999999999999999999998999


Q ss_pred             ccEEEEcCCCCCC--C-CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          111 LNILINNAGIMGT--P-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       111 id~vi~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +|++|||||....  . .+.+.++++..+++|+.+++.++++++|.|+++     +.++||++||..+..          
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-----~~~~iv~isS~~~~~----------  143 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-----RRGTLVGIASVAGVR----------  143 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcC----------
Confidence            9999999997532  2 226778999999999999999999999999875     468999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                           +.++...|+++|++++.++++++.|+...|  |+|++|+||+++|++....
T Consensus       144 -----~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  192 (257)
T PRK07024        144 -----GLPGAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAHN  192 (257)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhcC
Confidence                 577888999999999999999999999888  9999999999999986543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-31  Score=228.02  Aligned_cols=189  Identities=23%  Similarity=0.293  Sum_probs=158.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |.+++|+++||||++|||+++|++|++.|++|+++++ +....+...    +.. +.++.++.+|++++++++++++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA----DEL-GDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH----HHh-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999988765 444333332    222 2468889999999999999999998


Q ss_pred             hcCCC-ccEEEEcCCCC--------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438          106 IQHHQ-LNILINNAGIM--------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus       106 ~~~g~-id~vi~~ag~~--------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      +.++. +|++|||||..        .+..+.+.+++++.+++|+.+++.+++++++++.+.     +.++|++++|..+.
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~  150 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-----GFGRIINIGTNLFQ  150 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-----CCeEEEEECCcccc
Confidence            88887 99999999863        124567889999999999999999999999999764     45899999996543


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .               +..++..|+++|+++++++++++.++.+.|  |+||+|+||+++|+....
T Consensus       151 ~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~  199 (253)
T PRK08642        151 N---------------PVVPYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASA  199 (253)
T ss_pred             C---------------CCCCccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhc
Confidence            2               355677999999999999999999999999  999999999999986543

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-31  Score=228.53  Aligned_cols=189  Identities=26%  Similarity=0.357  Sum_probs=164.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||.++|++|+++|++|++++|+... ....+++    .+.++.++++|++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999998653 2222222    134577899999999999999999998


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++.++|.+.     +.++||++||..+..       
T Consensus        86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-------  153 (255)
T PRK06841         86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-----GGGKIVNLASQAGVV-------  153 (255)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-----CCceEEEEcchhhcc-------
Confidence            8899999999999753  34567889999999999999999999999999875     468999999977655       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+....|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       154 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        154 --------ALERHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKK  201 (255)
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCccccc
Confidence                    567788999999999999999999999888  999999999999998653

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=229.96  Aligned_cols=191  Identities=26%  Similarity=0.357  Sum_probs=164.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||++++++|+++|++|++++|+.. ..+..+++.+.  +.++.++.+|++++++++.+++.+.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999875 34444555433  446889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++++.+.     +.++||++||..+...       
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~-------  147 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-----KDGRIVMMSSVTGDMV-------  147 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhccc-------
Confidence            999999999999743  35677889999999999999999999999998764     4579999999765321       


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.+++..|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.+.
T Consensus       148 -------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        148 -------ADPGETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAES  195 (263)
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHh
Confidence                   356678999999999999999999999888  999999999999998653

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3.9e-31  Score=228.32  Aligned_cols=189  Identities=30%  Similarity=0.373  Sum_probs=164.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|+++||||++|||+++|++|+++|++|+++++ +.+..+...+++...  +.++.++.+|++++++++.+++++...++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999988865 555566666665543  45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|++|||||....  ..+.+.+++++.+++|+.+++.+++++.+++.++.    ++++||++||..+..          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~g~ii~isS~~~~~----------  145 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG----QGGRIINITSVHEHT----------  145 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCeEEEEEeeccccC----------
Confidence            99999999997532  45678899999999999999999999999997641    357999999976554          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++...|+++|+++++++++++.++.++|  |+||+|+||+++|++...
T Consensus       146 -----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~  193 (256)
T PRK12743        146 -----PLPGASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGM  193 (256)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccc
Confidence                 567788999999999999999999999988  999999999999998653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=230.86  Aligned_cols=189  Identities=28%  Similarity=0.361  Sum_probs=166.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||.++|++|+++|++|++++|+.+..++..+++     ..++.++.+|++|+++++.+++.+.+.
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988776665544     235888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++++.++.    .+++||++||..+..        
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~--------  145 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG----RGGKIINMASQAGRR--------  145 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC----CCcEEEEeCCHHhCC--------
Confidence            999999999999753  356778899999999999999999999999987641    247999999976654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|++++.++++++.|+.++|  |+||+|+||+++|++++.
T Consensus       146 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        146 -------GEALVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             -------CCCCCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhh
Confidence                   467788999999999999999999999988  999999999999998654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-32  Score=237.54  Aligned_cols=192  Identities=18%  Similarity=0.206  Sum_probs=149.6

Q ss_pred             CCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHH--------hCCCC-----ceeEEEcc
Q 023438           26 GIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK--------EIPSA-----KVDAMELD   90 (282)
Q Consensus        26 ~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~--------~~~~~-----~v~~~~~D   90 (282)
                      ..+++||+++|||++  +|||+++|++|+++|++|++.++.. .+....+....        ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            467899999999996  9999999999999999999987541 11111000000        00011     11122334


Q ss_pred             CCCH------------------HHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHH
Q 023438           91 LSSL------------------ASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTN  148 (282)
Q Consensus        91 vs~~------------------~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~  148 (282)
                      +++.                  ++++.+++++.+++|++|++|||||..    .++.+.+.++|++.+++|+.++++++|
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3333                  368999999999999999999999863    346688999999999999999999999


Q ss_pred             HHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCc-cchHhHHHHHHHHHHHHHHhcc-CCCcEE
Q 023438          149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANILHANELARRLKE-DGVDIT  226 (282)
Q Consensus       149 ~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~asK~a~~~~~~~la~e~~~-~g~~i~  226 (282)
                      +++|+|++       +|+||+++|..+..               +.+++. .|+++|+|+++|+++|+.|+++ +|  ||
T Consensus       162 a~~p~m~~-------~G~ii~iss~~~~~---------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~g--Ir  217 (299)
T PRK06300        162 HFGPIMNP-------GGSTISLTYLASMR---------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWG--IR  217 (299)
T ss_pred             HHHHHhhc-------CCeEEEEeehhhcC---------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--eE
Confidence            99999965       47899999977655               355554 7999999999999999999987 48  99


Q ss_pred             EEEeeCCccccCcccc
Q 023438          227 ANSVHPGAIATNIIRH  242 (282)
Q Consensus       227 v~~v~Pg~v~t~~~~~  242 (282)
                      ||+|+||+++|++...
T Consensus       218 Vn~V~PG~v~T~~~~~  233 (299)
T PRK06300        218 VNTISAGPLASRAGKA  233 (299)
T ss_pred             EEEEEeCCccChhhhc
Confidence            9999999999998653

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=230.61  Aligned_cols=184  Identities=27%  Similarity=0.307  Sum_probs=161.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +..+++||++|||||++|||.+++++|+++|++|++++|+....          . ..++.++++|++|+++++.+++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------L-PEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------c-CCceeEEecCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999986431          1 235888999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          105 NIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .+.++++|++|||||...    ...+.+.+++++.+++|+.+++.++++++++++++     +.++||++||..+..   
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~---  143 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-----GSGVIIHVTSIQRRL---  143 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEecccccC---
Confidence            999999999999999642    24567889999999999999999999999999875     457999999977654   


Q ss_pred             CCccccCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          181 EGIRFDKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                  +.+ +...|+++|+++++++++++.|+.++|  |+||+|+||+++|++..
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        144 ------------PLPESTTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAV  191 (260)
T ss_pred             ------------CCCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHH
Confidence                        333 678999999999999999999999999  99999999999999864

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3.4e-32  Score=232.94  Aligned_cols=179  Identities=37%  Similarity=0.466  Sum_probs=161.4

Q ss_pred             cCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC-CCccEE
Q 023438           38 GAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQLNIL  114 (282)
Q Consensus        38 G~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~-g~id~v  114 (282)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+++.++++ ..  ++.+|++++++++++++++.+.+ |++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999999998888888888775 23  59999999999999999999999 999999


Q ss_pred             EEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          115 INNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       115 i~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |||+|...      +..+.+.++|++.+++|+.+++.++|++.|+|.+       +++||++||..+..           
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~-----------  139 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQR-----------  139 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTS-----------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhcc-----------
Confidence            99999643      3456788999999999999999999999998876       48999999977655           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCccccCccccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          +.+++..|+++|+|+++++++|+.|+++ +|  ||||+|+||+++|++.+..
T Consensus       140 ----~~~~~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~  189 (241)
T PF13561_consen  140 ----PMPGYSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERI  189 (241)
T ss_dssp             ----BSTTTHHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHH
T ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhcc
Confidence                5788889999999999999999999999 99  9999999999999986643

...

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-31  Score=228.99  Aligned_cols=189  Identities=23%  Similarity=0.246  Sum_probs=168.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++++++++.+++.+.+.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777666543  456889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++++|++|||||...   +..+.+.+++++.+++|+.+++.+++++.+++.+.      +++||++||..+..       
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~-------  146 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRH-------  146 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhcc-------
Confidence            999999999999643   34567889999999999999999999999999763      47999999976654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.++...|+++|++++.++++++.|++..|  |++|+|+||.++||+..
T Consensus       147 --------~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~  193 (258)
T PRK07890        147 --------SQPKYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLK  193 (258)
T ss_pred             --------CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHH
Confidence                    567788999999999999999999999888  99999999999999754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=229.92  Aligned_cols=213  Identities=18%  Similarity=0.142  Sum_probs=171.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++||||++|||+++|++|+++| ++|++++|+.+. +++..+++.+.. +.++.++++|++|+++++++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            67899999999999999999999995 899999999876 777777776542 34689999999999999999998876 


Q ss_pred             CCCccEEEEcCCCCCCCC--cCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGTPF--MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|+|+|......  ..+.++..+.+++|+.+++.++++++|+|.++     +.++||++||..+..        
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~g~~--------  151 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVAGER--------  151 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechhhcC--------
Confidence            489999999999764321  12344556789999999999999999999985     468999999987654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLL  265 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~  265 (282)
                             +.++...|++||+++.+|+++++.|+.++|  |+|++|+||+++|++........     ....|+.+++.+.
T Consensus       152 -------~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~A~~i~  217 (253)
T PRK07904        152 -------VRRSNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHAKEAP-----LTVDKEDVAKLAV  217 (253)
T ss_pred             -------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccCCCCC-----CCCCHHHHHHHHH
Confidence                   355677899999999999999999999998  99999999999999876542111     1124566666665


Q ss_pred             cChHHH
Q 023438          266 KNVQQV  271 (282)
Q Consensus       266 ~~~~~~  271 (282)
                      ..+.++
T Consensus       218 ~~~~~~  223 (253)
T PRK07904        218 TAVAKG  223 (253)
T ss_pred             HHHHcC
Confidence            555443

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-31  Score=228.49  Aligned_cols=188  Identities=21%  Similarity=0.283  Sum_probs=169.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+||||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++++++++.+++.+.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999998888887777654  4578899999999999999999999988999


Q ss_pred             cEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |+||||||...  ...+.+.+++++.+++|+.+++.+++.++|.+.+.     +.++||++||..+..            
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  141 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-----KSGRIVNIASMAGLM------------  141 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcC------------
Confidence            99999999753  35677889999999999999999999999999875     457999999987765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++...|+++|+++++++++++.|+.+.|  |++++|+||+++|++....
T Consensus       142 ---~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        142 ---QGPAMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCccccc
Confidence               577889999999999999999999999888  9999999999999987653

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-31  Score=227.74  Aligned_cols=189  Identities=20%  Similarity=0.232  Sum_probs=166.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||.+++++|++.|++|++++|+.+.+.+..+++.+.  +.++.++.+|++++++++++++++..
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999988777766666544  34678899999999999999999988


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++++++++.+      ++++|+++||..+..       
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~------~~g~iv~iss~~~~~-------  149 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR------PGASIIQISAPQAFV-------  149 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh------CCCEEEEECChhhcc-------
Confidence            889999999999854  23557788999999999999999999999999976      357999999977654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-cCcc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNII  240 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~  240 (282)
                              +.++...|+++|+++++|+++++.|+...|  |+|++|+||.++ |+.+
T Consensus       150 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~  196 (264)
T PRK07576        150 --------PMPMQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGM  196 (264)
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHH
Confidence                    467788999999999999999999999888  999999999997 5543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-31  Score=227.88  Aligned_cols=193  Identities=26%  Similarity=0.310  Sum_probs=169.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +.++++++++||||++|||.+++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++++++.++++++.
T Consensus         5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   82 (263)
T PRK07814          5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAV   82 (263)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988877777776543  4468889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  ...+.+.++++.++++|+.+++.+++++.+++.+..    +.+++|++||..+..      
T Consensus        83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~~sS~~~~~------  152 (263)
T PRK07814         83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS----GGGSVINISSTMGRL------  152 (263)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc----CCeEEEEEccccccC------
Confidence            98999999999999643  355778899999999999999999999999998631    357999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|+.+ +  |+||+|+||++.|++...
T Consensus       153 ---------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~  199 (263)
T PRK07814        153 ---------AGRGFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEV  199 (263)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhh
Confidence                     4677889999999999999999999976 5  999999999999997653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=228.55  Aligned_cols=189  Identities=28%  Similarity=0.313  Sum_probs=167.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.+.  +.++.++.+|+++++++.++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999988877776666543  34688999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|++|||||...  +..+.+.++++..+++|+.+++.+++++++++.++     +.++||++||..+..          
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  147 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-----GGGLIINVSSIAARN----------  147 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCc----------
Confidence            9999999999753  34567889999999999999999999999999875     468999999977654          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.+++..|+++|++++.++++++.|+...|  +++++|+||+++|++...
T Consensus       148 -----~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~  195 (241)
T PRK07454        148 -----AFPQWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDT  195 (241)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCcccc
Confidence                 466778999999999999999999999888  999999999999998654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-31  Score=225.60  Aligned_cols=198  Identities=28%  Similarity=0.426  Sum_probs=170.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++|+++||||+||||.+++++|++.|++|++++|+.+.+++..+++...  ..++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988877777666543  3468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCeEEEEcCCccccccc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~---~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.++++|++|||||...  +..+.+.++++.++++|+.+++.+++++++.+.+....   ....+++|++||..+..   
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---  158 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR---  158 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC---
Confidence            88999999999999643  24566788999999999999999999999999875321   11247999999976654   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.+....|+++|++++.+++.++.++.++|  ++|++|+||+++|++...
T Consensus       159 ------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        159 ------------VLPQIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHH  206 (258)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchh
Confidence                        466778999999999999999999999888  999999999999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=229.23  Aligned_cols=190  Identities=28%  Similarity=0.329  Sum_probs=164.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|++|||||++|||.+++++|+++|++|++++|+... .+...+.+...  +.++.++.+|+++.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998643 33443434322  4568899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ..++++|++|||||...   ...+.+.+++.+.+++|+.+++.+++++++.+.+       .++||++||..++.     
T Consensus       120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~-----  187 (290)
T PRK06701        120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYE-----  187 (290)
T ss_pred             HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccC-----
Confidence            98899999999999642   3567888999999999999999999999999854       47999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.++...|+++|+|+++++++++.++.++|  |+|++|+||+++|++...
T Consensus       188 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        188 ----------GNETLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCccccc
Confidence                      456778899999999999999999999888  999999999999998654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-31  Score=250.72  Aligned_cols=188  Identities=26%  Similarity=0.373  Sum_probs=167.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++.+.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999988777665554     3467889999999999999999999999


Q ss_pred             CCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 HQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++|+||||||+.    .+..+.+.++|++++++|+.+++.++++++|+|.++.    .+++||++||..+..       
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~~iv~isS~~~~~-------  146 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG----HGAAIVNVASGAGLV-------  146 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCeEEEECCcccCC-------
Confidence            9999999999973    2356788999999999999999999999999998741    234999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+++++|+++++.|+.+.|  |+|++|+||+++|++...
T Consensus       147 --------~~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        147 --------ALPKRTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhh
Confidence                    567888999999999999999999999988  999999999999998654

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=232.53  Aligned_cols=182  Identities=26%  Similarity=0.319  Sum_probs=160.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC-C
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-H  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~-g  109 (282)
                      +|+++||||+||||+++|++|++.|++|++++|+.+.++..    .+    ..+.++.+|++|.++++.+++.+.+.+ +
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA----EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH----CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999997765433    22    147789999999999999999987655 6


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|++|||||...  ...+.+.++++..+++|+.+++.++++++|++.+.     +.++||++||..+..          
T Consensus        76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~----------  140 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSILGLV----------  140 (277)
T ss_pred             CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECChhhcC----------
Confidence            8999999999753  35677889999999999999999999999999875     468999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++...|+++|+++++++++|+.|+.+.|  |+|++|+||+++|++...
T Consensus       141 -----~~~~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        141 -----PMKYRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             -----CCCccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhH
Confidence                 567788999999999999999999999999  999999999999998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.6e-31  Score=226.11  Aligned_cols=190  Identities=25%  Similarity=0.334  Sum_probs=167.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEE-EEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii-~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |++++++||||++|||++++++|+++|++|++ .+|+.+..++..+++.+.  +.++.++.+|++|++++.++++++...
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999876 578887777777776554  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||..  .+..+.+.++++..+++|+.+++.+++++++++.++     +.++||++||..+..        
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~--------  146 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-----GGGKIISLSSLGSIR--------  146 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcc--------
Confidence            99999999999964  345677889999999999999999999999999875     468999999976544        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++++++++.++.+.|  |++|+|+||+++|++...
T Consensus       147 -------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        147 -------YLENYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhh
Confidence                   466788999999999999999999998888  999999999999998654

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-30  Score=226.74  Aligned_cols=185  Identities=26%  Similarity=0.301  Sum_probs=163.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.+++..+.+     +..+.++++|++|+++++.+++.+.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999987765544332     33578899999999999999999988889


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|.++++     +.++||++||..+..          
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~----------  141 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-----RSGHIIQISSIGGIS----------  141 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcC----------
Confidence            9999999999753  35677889999999999999999999999999875     457999999977665          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                           +.++...|+++|++++++++.++.|+...|  ++|++|+||.++|++..
T Consensus       142 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        142 -----AFPMSGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccc
Confidence                 467788999999999999999999999888  99999999999999874

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-31  Score=225.57  Aligned_cols=183  Identities=26%  Similarity=0.291  Sum_probs=160.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.      .  .  .+..+.++++|++++++++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V--DGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h--cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998654      1  1  144688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|++|||||...  ...+.+.+++++.+++|+.+++.+++++.++|.++.    ..++||++||..+..       
T Consensus        72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~ii~isS~~~~~-------  140 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP----GGGSIVNIGSVSGRR-------  140 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEEcccccCC-------
Confidence            9999999999999653  345678899999999999999999999999997631    347999999987665       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.++...|+++|+++++|++.++.|+.+.   |+||+|+||+++|++..
T Consensus       141 --------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~  186 (252)
T PRK07856        141 --------PSPGTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSE  186 (252)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHh
Confidence                    56788999999999999999999999864   99999999999999865

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-31  Score=228.99  Aligned_cols=192  Identities=22%  Similarity=0.262  Sum_probs=154.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++.+ .++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            479999998 699999999996 8999999999988777777666543  457889999999999999999988 46789


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc-c---C-----
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-H---E-----  181 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~-~---~-----  181 (282)
                      +|++|||||+..     ..+++++.+++|+.+++.++++++|+|.+       ++++|+++|.++.... .   .     
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccc
Confidence            999999999742     34678999999999999999999999965       3678889987765431 0   0     


Q ss_pred             CccccCCC------CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRFDKIN------DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~~~~~------~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ..+.+.+.      .....+++..|++||+|+.++++.++.|+.++|  ||||+|+||+++|++..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~  208 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQ  208 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccch
Confidence            00000000      000013567899999999999999999999988  99999999999999864

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-30  Score=223.44  Aligned_cols=189  Identities=29%  Similarity=0.326  Sum_probs=165.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||+||||.+++++|++.|++|++++|+.+..+...+++.+.  +.++.++.+|+++.++++.+++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999987777766666543  336788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          108 HHQLNILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       108 ~g~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++++|+||||||...     +..+.+.+++++.+++|+.+++.+++++++++.+.     +.++||++||..+.      
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~------  149 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-----GGGAIVNQSSTAAW------  149 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccc------
Confidence            899999999999743     23466889999999999999999999999999875     46899999997643      


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                  .+...|+++|+++++++++++.++...|  |+++.|+||.++|++.+..
T Consensus       150 ------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        150 ------------LYSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             ------------CCccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCcccccc
Confidence                        3456899999999999999999998888  9999999999999997654

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-31  Score=224.76  Aligned_cols=186  Identities=27%  Similarity=0.351  Sum_probs=162.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||.+++++|++.|++|++++|+.+.+.+..+++     +.++.++++|++|.+++..+++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876655544443     446888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|++..       .+++|+++|..+..        
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~--------  142 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHI--------  142 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhcc--------
Confidence            999999999999753  3456788999999999999999999999999854       46888888876654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.+....|+++|+++++++++++.|+.+.|  |++++|+||+++||+.+.
T Consensus       143 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        143 -------GMPNSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHh
Confidence                   466788999999999999999999998888  999999999999998653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-31  Score=228.04  Aligned_cols=192  Identities=28%  Similarity=0.316  Sum_probs=162.9

Q ss_pred             CCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcC-----------hhhHHHHHHHHHHhCCCCceeEEEccCCC
Q 023438           27 IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRD-----------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        27 ~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~-----------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      +.+++|++|||||++  |||.++|++|++.|++|++++|+           ........+++...  +.++.++.+|+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            357889999999994  99999999999999999999987           22222233333222  4468999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEc
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vs  171 (282)
                      .+++..+++++.+.++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++.+.+.+.     ..++||++|
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~s  153 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-----AGGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCeEEEEEC
Confidence            99999999999999999999999999753  35567889999999999999999999999998764     467999999


Q ss_pred             CCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      |..+..               +.++...|+++|+++++++++++.|+...|  |+|++|+||.++|++..+
T Consensus       154 s~~~~~---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~~  207 (256)
T PRK12748        154 SGQSLG---------------PMPDELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWITE  207 (256)
T ss_pred             CccccC---------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCCh
Confidence            976654               466788999999999999999999999888  999999999999997653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.2e-31  Score=225.40  Aligned_cols=190  Identities=28%  Similarity=0.329  Sum_probs=164.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |++|+++||||++|||+++|++|+++|++|++. +++.....+..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998875 45555555555555433  456888899999999999999999998


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++++.++     +.++||++||..+..        
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~--------  145 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQK--------  145 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEechhccC--------
Confidence            999999999999753  35677899999999999999999999999999774     457999999976654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++++++++.|+...|  +++|+|+||+++||+.+.
T Consensus       146 -------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        146 -------GQFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             -------CCCCChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhh
Confidence                   467788999999999999999999999888  999999999999998764

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-31  Score=224.56  Aligned_cols=191  Identities=23%  Similarity=0.290  Sum_probs=169.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++||||++|||++++++|++.|++|++++|+.+..++..+++.+..++.++.++++|+++++++.++++++...+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999888888777776666678999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||+...  ..+.+.+.+++.+++|+.+++.+++++++++++.     +.++||++||..+..           
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  145 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-----GSGHLVLISSVSAVR-----------  145 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEecccccc-----------
Confidence            9999999997533  4456778889999999999999999999999875     467999999977665           


Q ss_pred             CCCCCCCC-CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          189 NDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       189 ~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          +.+. ...|+.+|++++++++.++.++...|  ++|++|+||+++|++.+..
T Consensus       146 ----~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        146 ----GLPGVKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcc
Confidence                3443 57899999999999999999998777  9999999999999987654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=6.8e-31  Score=223.97  Aligned_cols=181  Identities=22%  Similarity=0.230  Sum_probs=154.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||++|||+++|++|+++|++|++++|+.+...   +++.+.    .+.++.+|++++++++++++++...+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            479999999999999999999999999999999875432   233221    3678899999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||...  ...+.+.++|++.+++|+.+++.+++++++.|.+..   .+.++||++||..+..           
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~---~~~g~iv~~ss~~~~~-----------  140 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG---HAASDIIHITDYVVEK-----------  140 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC---CCCceEEEEcchhhcc-----------
Confidence            999999999642  245667899999999999999999999999998741   0147999999976554           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                          +.+++..|+++|+++++++++++.|+++ +  ||||+|+||++.|+.
T Consensus       141 ----~~~~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~  184 (236)
T PRK06483        141 ----GSDKHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNE  184 (236)
T ss_pred             ----CCCCCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCC
Confidence                4677889999999999999999999986 5  999999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.1e-31  Score=224.82  Aligned_cols=189  Identities=25%  Similarity=0.269  Sum_probs=164.4

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++||||++|||.++++.|+++|++|++++|+ .+.+++..+++.+......+..+++|++++++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666666666665443223456788999999999999999999999999


Q ss_pred             EEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       113 ~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      ++|||||...  ...+.+.+++++++++|+.+++.+++++++.+++.     +.++||++||..+..             
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~~-------------  143 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAFK-------------  143 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhcc-------------
Confidence            9999999753  35677889999999999999999999999999875     457999999987765             


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                        +.+++..|+++|+++++++++++.|+.+++.+|+|++|+||+++||+...
T Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        144 --AEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence              46778899999999999999999999887767999999999999998763

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=7.1e-31  Score=224.16  Aligned_cols=192  Identities=29%  Similarity=0.343  Sum_probs=169.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++++||||++|||.+++++|++.|++|++++|+.+..++..+++...  +.++.++.+|++++++++++++.+.+.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777776543  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||+|...  ...+.+++++++.+++|+.+++.+++++.+++.+.     +.+++|++||..+..        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~--------  148 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-----QSGDIINISSTAGQK--------  148 (239)
T ss_pred             cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEEcchhhcc--------
Confidence            999999999999643  34567889999999999999999999999999874     467999999977665        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+.+|++++.+++.++.|+.+.|  +++++|+||.+.|++....
T Consensus       149 -------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~  197 (239)
T PRK07666        149 -------GAAVTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVDL  197 (239)
T ss_pred             -------CCCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhhc
Confidence                   466778899999999999999999999888  9999999999999986543

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3e-30  Score=221.34  Aligned_cols=192  Identities=31%  Similarity=0.405  Sum_probs=170.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||+|+||.++|++|+++|++|++++|+.+..++..+++.+.  +.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988888777777554  347899999999999999999999998


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++++.+++.++     +.+++|++||..+..        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  148 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-----GRGRIVNLASDTALW--------  148 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEECchhhcc--------
Confidence            899999999999753  34567889999999999999999999999998875     467999999977654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.+....|+++|++++++++.++.++...+  ++|++|+||.++|++.+..
T Consensus       149 -------~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  197 (250)
T PRK12939        149 -------GAPKLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYV  197 (250)
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCcccccc
Confidence                   466778999999999999999999998888  9999999999999997654

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.5e-30  Score=226.17  Aligned_cols=182  Identities=32%  Similarity=0.345  Sum_probs=161.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++||||+||||++++++|+++|++|++++|+.+....          ..++.++++|++|+++++++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998654321          23578899999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|+||||||...  ...+.+.+++++.+++|+.+++.+++++++++++.     +.++||++||..+..          
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  137 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-----GSGRIINISSVLGFL----------  137 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEECCccccC----------
Confidence            9999999999753  35567889999999999999999999999999875     568999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                           +.+....|+++|+++++++++++.|+.+.|  |++++|+||+++|++....
T Consensus       138 -----~~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        138 -----PAPYMALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCccccccccc
Confidence                 467788999999999999999999999988  9999999999999987643

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=223.97  Aligned_cols=191  Identities=31%  Similarity=0.392  Sum_probs=169.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|+++||||+|+||.+++++|+++|++|++++|+.+...+..+++.   .+.++.++++|++|+++++++++.+.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887776666554   245688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||+|....  ..+.+.+++++.+++|+.+++.+++.++++++++     +.++|+++||..+..       
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~-------  145 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-----GGGSIVNTASQLALA-------  145 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-----CCeEEEEECChhhcc-------
Confidence            99999999999997533  4567889999999999999999999999999875     467999999977654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+.+|++++.++++++.|+..+|  +++++|+||++.|++...
T Consensus       146 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        146 --------GGRGRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhh
Confidence                    466788999999999999999999999888  999999999999998654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.98  E-value=6.4e-31  Score=228.03  Aligned_cols=183  Identities=28%  Similarity=0.361  Sum_probs=160.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+++++|+++||||++|||++++++|+++|++|++++++.....           ..++.++++|++++++++++++.+.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999998865421           2357889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC-----------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          106 IQHHQLNILINNAGIMGT-----------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~-----------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +.++++|++|||||....           ..+.+.++|++.+++|+.+++.+++++.++|.++     +.++||++||..
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~  147 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSEA  147 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-----CCcEEEEEcccc
Confidence            999999999999996422           1356889999999999999999999999999874     468999999987


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-cCccc
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR  241 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~  241 (282)
                      +..               +.++...|+++|+++++++++++.|+.+.|  |+||+|+||+++ |++..
T Consensus       148 ~~~---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~  198 (266)
T PRK06171        148 GLE---------------GSEGQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRT  198 (266)
T ss_pred             ccC---------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcC
Confidence            765               467788999999999999999999999998  999999999997 66543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=227.88  Aligned_cols=185  Identities=26%  Similarity=0.333  Sum_probs=162.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+++++||||+||||++++++|++.|++|++++|+.+.++...+    .. +.++.++.+|++|++++.++++.+...++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LH-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hc-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999776544332    22 34688899999999999999999998899


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|+++++     +.++||++||.++..          
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~iSS~~~~~----------  142 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-----RRGHIVNITSMGGLI----------  142 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCCEEEEEecccccC----------
Confidence            9999999999753  35677889999999999999999999999999875     457999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                           +.++...|+++|+++++++++++.|+...|  +++++|+||.++|++..
T Consensus       143 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        143 -----TMPGIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccc
Confidence                 467888999999999999999999999888  99999999999998744

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-30  Score=224.67  Aligned_cols=190  Identities=23%  Similarity=0.286  Sum_probs=165.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||+++||.++|++|++.|++|++++|+....+...+++....+..++.++.+|+++.+++..+++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998887777777665543346899999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||...  ...+.+.+++++.+++|+.+++.+++++++.|.+..    ..+++|++||..+..           
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~~ss~~~~~-----------  146 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG----IQGRIIQINSKSGKV-----------  146 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC----CCcEEEEecCccccc-----------
Confidence            999999999653  356778899999999999999999999999998741    157999999976654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-ccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI-ATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v-~t~~~~  241 (282)
                          +.+....|+++|+|+++++++++.|++++|  |+||+|+||.+ .|++..
T Consensus       147 ----~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        147 ----GSKHNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhh
Confidence                456678999999999999999999999998  99999999975 666654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.98  E-value=3.4e-30  Score=229.04  Aligned_cols=206  Identities=37%  Similarity=0.557  Sum_probs=165.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+|+++||||++|||+++|++|++.| ++|++++|+.+..++..+++..  .+..+.++.+|+++.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999 9999999998887777666532  24568889999999999999999998888


Q ss_pred             CCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC----
Q 023438          109 HQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE----  181 (282)
Q Consensus       109 g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~----  181 (282)
                      +++|++|||||+..+   ..+.+.++++..+++|+.+++.++++++|+|++..   .+.++||++||.++......    
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP---NKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC---CCCCeEEEEecCccccccCCCcCC
Confidence            999999999997533   23568899999999999999999999999998741   02479999999876532100    


Q ss_pred             -CccccC-------------CCCCCCCCCCccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcc-ccCcccc
Q 023438          182 -GIRFDK-------------INDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAI-ATNIIRH  242 (282)
Q Consensus       182 -~~~~~~-------------~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v-~t~~~~~  242 (282)
                       ..++.+             .....+..++.+|++||+|+..+++.|++++. +.|  |+|++|+||.+ .|++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCccccc
Confidence             001111             11123445677899999999999999999985 457  99999999999 6998765

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.2e-30  Score=221.69  Aligned_cols=190  Identities=31%  Similarity=0.417  Sum_probs=164.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++++++++||||++|||+++|++|+++|++|+++.|+.. ..++..+++.+.  +.++.++.+|+++.++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999988877543 344555555443  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++|||||...  +..+.+.+++++++++|+.+++.+++++++.+.+       .++||++||..+..      
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~------  145 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIAL------  145 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccC------
Confidence            99999999999999753  3456788999999999999999999999999854       47999999976554      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.+++..|+++|++++.++++++.|+...|  +++++|+||+++|++...
T Consensus       146 ---------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~  193 (245)
T PRK12937        146 ---------PLPGYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFN  193 (245)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcc
Confidence                     567788999999999999999999999888  999999999999998643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=2e-32  Score=213.67  Aligned_cols=203  Identities=25%  Similarity=0.279  Sum_probs=173.2

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |..++.|+++++||+..|||+++++.|++.|+.||.++|++..+..+.++.     ..-+..+..|+++++.+.+++-. 
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~~-   74 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLVP-   74 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhcc-
Confidence            346789999999999999999999999999999999999998877766653     23488899999998777666554 


Q ss_pred             HhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                         .+.+|.++||||+.  +++.+.+.+.++..|++|+.+.+.++|...+-+..+    +.+|.|+++||.++.+     
T Consensus        75 ---v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R----~~~GaIVNvSSqas~R-----  142 (245)
T KOG1207|consen   75 ---VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR----QIKGAIVNVSSQASIR-----  142 (245)
T ss_pred             ---cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc----cCCceEEEecchhccc-----
Confidence               36899999999964  668889999999999999999999999977776665    2468899999988877     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc-CchhhhhhHHHhhhh
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH-NSLFRSMNTILHALP  257 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p  257 (282)
                                +......|+++|+|+.+++++|+.|+++.+  ||||+|.|..+-|.|.++ |+-+..-+.+..++|
T Consensus       143 ----------~~~nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riP  206 (245)
T KOG1207|consen  143 ----------PLDNHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIP  206 (245)
T ss_pred             ----------ccCCceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccCCchhccchhhhCc
Confidence                      578889999999999999999999999998  999999999999999877 444455556666666

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.3e-30  Score=221.16  Aligned_cols=192  Identities=22%  Similarity=0.231  Sum_probs=165.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC--HHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS--LASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~--~~~i~~~~~~i~  105 (282)
                      +|++++++||||++|||.+++++|++.|++|++++|+.+.++...+++.+.. +..+.++++|+++  .+++.++++++.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHH
Confidence            3788999999999999999999999999999999999988877777765432 3357788999986  568899999988


Q ss_pred             hcC-CCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          106 IQH-HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       106 ~~~-g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      ..+ +++|++|||||..   .+..+.+.+++.+.+++|+.+++.+++++++.+.+.     +.+++++++|..+..    
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~----  152 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-----PDASVIFVGESHGET----  152 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-----CCCEEEEEecccccc----
Confidence            877 7899999999964   345678889999999999999999999999999874     468999999976654    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCccccCcccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKED-GVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~-g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                 +.+++..|+++|++++.++++++.|+.+. +  |+|++|+||+++||+...
T Consensus       153 -----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~--i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        153 -----------PKAYWGGFGASKAALNYLCKVAADEWERFGN--LRANVLVPGPINSPQRIK  201 (239)
T ss_pred             -----------CCCCccchHHhHHHHHHHHHHHHHHhccCCC--eEEEEEecCcccCccccc
Confidence                       56777899999999999999999999875 5  999999999999998653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=3.8e-30  Score=220.86  Aligned_cols=191  Identities=31%  Similarity=0.378  Sum_probs=168.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++++++||||+|+||.+++++|+++|++|++++|+....+.....+..   +.++.++.+|++++++++.+++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999999998877766665543   34688999999999999999999988


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||...   +..+.+.+++++.+++|+.+++.+++.+++++.++     +.++||++||..+..      
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------  146 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-----GGGAIVNVASTAGLR------  146 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcC------
Confidence            8899999999999742   24567889999999999999999999999999874     467999999977654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+.+|++++.+++.++.++++.|  |++++|+||+++|++...
T Consensus       147 ---------~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~  194 (251)
T PRK07231        147 ---------PRPGLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEA  194 (251)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchh
Confidence                     567788999999999999999999999888  999999999999998664

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=224.72  Aligned_cols=185  Identities=24%  Similarity=0.253  Sum_probs=163.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc-CCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~-~g~  110 (282)
                      |+++||||+||||++++++|+++|++|++++|+.+.+++..+.+.    +.++.++++|+++.+++.++++.+... +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999877666555432    457899999999999999999988776 789


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||....  ..+.+.++++.++++|+.+++.+++++.++|+.+     +.++||++||..+..           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  141 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-----PGARVINTSSASAIY-----------  141 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEeCchhhCc-----------
Confidence            9999999997543  5567889999999999999999999999999875     468999999987765           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.++...|+.+|+++++++++++.++.+.|  |++++|+||+++|++.+.
T Consensus       142 ----~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        142 ----GQPGLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCccccc
Confidence                467788999999999999999999999888  999999999999998764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.6e-30  Score=223.94  Aligned_cols=190  Identities=25%  Similarity=0.310  Sum_probs=167.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |.+++++++||||++|||.+++++|+++|++|++++|+.+.+++..+++ + . +.++.++.+|++|+++++.+++.+..
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999999988877776666 2 2 34788999999999999999998876


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                       ++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++++.+.     +.++++++||..+..       
T Consensus        78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  144 (263)
T PRK09072         78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-----PSAMVVNVGSTFGSI-------  144 (263)
T ss_pred             -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEecChhhCc-------
Confidence             789999999999753  35567889999999999999999999999999874     458999999977655       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+++.+++++++.|+.+.|  |+|++|+||.++|++...
T Consensus       145 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        145 --------GYPGYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhh
Confidence                    467788999999999999999999999888  999999999999998653

>TIGR02415 23BDH acetoin reductases

Probab=99.97  E-value=5.5e-30  Score=220.41  Aligned_cols=188  Identities=26%  Similarity=0.333  Sum_probs=166.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||+|+||.+++++|++.|++|++++|+....++..+++...  +.++.++.+|++|++++.++++.+.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988777777766543  4578899999999999999999999999999


Q ss_pred             cEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||||...  +..+.+.+++++.+++|+.+++.+++.+++.+++..    .+++||++||..+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~------------  142 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG----HGGKIINAASIAGHE------------  142 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEecchhhcC------------
Confidence            99999999753  355778899999999999999999999999998751    247999999977665            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                         +.+.+..|+++|+++++++++++.++.+.|  |+|++|+||+++|++.+.
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~  190 (254)
T TIGR02415       143 ---GNPILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEE  190 (254)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhh
Confidence               567889999999999999999999999888  999999999999998654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-30  Score=224.52  Aligned_cols=194  Identities=22%  Similarity=0.187  Sum_probs=169.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++|++|++|||||+||||.+++++|+++|++|++++|+.+..+...+++.......++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777766665432234688899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||...   +..+.+.+++...+++|+.+++.+++++++++.+.     +.++|+++||..+..      
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~sS~~~~~------  151 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-----GGGSFVGISSIAASN------  151 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhcC------
Confidence            9999999999999642   35567888999999999999999999999999764     457999999977654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++.+++.++.++...+  |++++|+||+++|++...
T Consensus       152 ---------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        152 ---------THRWFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccc
Confidence                     456778999999999999999999999888  999999999999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-30  Score=224.54  Aligned_cols=189  Identities=28%  Similarity=0.345  Sum_probs=165.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.... +..+.++.+|++++++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999888777777765432 2335668899999999999999999889999


Q ss_pred             cEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||+|..  ....+.+.++++..+++|+.+++.++++++|+|.+.    +..++||++||..+..            
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~------------  143 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA----GRGGHLVNVSSAAGLV------------  143 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEccccccC------------
Confidence            9999999964  335678999999999999999999999999999763    1357999999976654            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                         +.++...|+++|+++.+++++++.|+.++|  |+|++|+||.++|++++.
T Consensus       144 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        144 ---ALPWHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhc
Confidence               567788999999999999999999999888  999999999999998764

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=225.13  Aligned_cols=191  Identities=29%  Similarity=0.374  Sum_probs=167.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++|++|||||+||||.+++++|+++|++|++++|+.+..++..+++.....+.++.++.+|++|+++++. ++++...+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46799999999999999999999999999999999988777766655443223568899999999999999 89988888


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|++|||||....  ..+.+.+++++.+++|+.+++.+++++++++++.     +.++||++||..+..         
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~---------  145 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-----KSGKIINISSISGRV---------  145 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECcccccC---------
Confidence            999999999997543  4567889999999999999999999999999875     457999999977655         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.++...|+++|+++++++++++.|+.++|  |++++|+||+++|+++..
T Consensus       146 ------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        146 ------GFPGLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             ------CCCCCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhc
Confidence                  467788999999999999999999999988  999999999999998653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.97  E-value=4.2e-30  Score=221.40  Aligned_cols=199  Identities=26%  Similarity=0.289  Sum_probs=165.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||++|||+++|++|++.|++|++++|+.+.+++..+++...+++..+.++.+|++|++++.++++++...+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888888777655444456778999999999999999999989


Q ss_pred             CCccEEEEcCCCC-----CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          109 HQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       109 g~id~vi~~ag~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|||||..     ....+.+.+++...+++|+.+++.++++++++|+++     +.++||++||..+......  
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~--  154 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-----GGGNLVNISSIYGVVAPKF--  154 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCceEEEEechhhhccccc--
Confidence            9999999999753     235577889999999999999999999999999875     4579999999776542100  


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                         ...+..+......|+++|+++++++++++.|+.+.|  |+||+|+||.+.++.
T Consensus       155 ---~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        155 ---EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQ  205 (256)
T ss_pred             ---hhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCC
Confidence               001111122234799999999999999999999888  999999999998765

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-30  Score=221.34  Aligned_cols=186  Identities=27%  Similarity=0.338  Sum_probs=160.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++|++++||||++|||.+++++|+++|++|++++|+....+...+++       ...++++|++++++++++++.+.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-------GGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-------CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            78999999999999999999999999999999999877655544433       12578899999999999999998888


Q ss_pred             CCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 HQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++|++|||||...    +..+.+.+++++.+++|+.+++.+++.++|+++++     +.++||++||..+..+      
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~~sS~~~~~g------  146 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-----GKGSIINTASFVAVMG------  146 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-----CCcEEEEEcchhhccC------
Confidence            99999999999643    23456788999999999999999999999999875     4679999999766542      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|++++++++.++.++.++|  |+|++|+||.++|++...
T Consensus       147 --------~~~~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~  194 (255)
T PRK06057        147 --------SATSQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQE  194 (255)
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhh
Confidence                    123567899999999999999999999888  999999999999998664

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.5e-30  Score=218.21  Aligned_cols=190  Identities=33%  Similarity=0.429  Sum_probs=159.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++++||||++|||.+++++|+++|++|++++ |+.+...+..+.+...  +.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999988887 4444455554555433  34688899999999999999999999999


Q ss_pred             CccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          110 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       110 ~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      ++|+||||||...   ...+.+.+++++.+++|+.+++.+++++++.+.++..  +++++||++||.++..         
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~---------  148 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG--GRGGAIVNVSSMAARL---------  148 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CCCeEEEEECchhhcC---------
Confidence            9999999999753   2456788999999999999999999999999876310  1247899999987665         


Q ss_pred             CCCCCCCCCC-CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                            +.++ +..|+++|+++++++++++.++.++|  |+|++|+||.+.||+..
T Consensus       149 ------~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        149 ------GSPGEYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             ------CCCCCccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhh
Confidence                  2333 35799999999999999999999888  99999999999999754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=1e-29  Score=218.05  Aligned_cols=191  Identities=29%  Similarity=0.377  Sum_probs=164.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|+++||||++|||.++|++|+++|++|++..+ +.+..++..+++.+.  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999987654 455555555555443  457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++++.+.     ..+++|++||..+..        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~--------  148 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-----EEGRIISISSIIGQA--------  148 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchhhcC--------
Confidence            9999999999997543  4567889999999999999999999999999864     457999999977655        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++++++++++.++.+.|  ++++.|+||.++|++....
T Consensus       149 -------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~  197 (247)
T PRK12935        149 -------GGFGQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEV  197 (247)
T ss_pred             -------CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhc
Confidence                   356778999999999999999999998888  9999999999999986643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=221.81  Aligned_cols=191  Identities=27%  Similarity=0.272  Sum_probs=167.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+++...+..+++.+.  +.++.++++|+++.++++.+++++...
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888877777554  456888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHH-HhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++++|+||||||...  ...+.+.++++..+++|+.+++.+++++++.+ ++.     +.++||++||..+..       
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~-------  149 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHE-------  149 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcC-------
Confidence            899999999999753  34466788999999999999999999999999 543     467999999976554       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+....|+++|++++++++.++.++...+  |++++|+||.++||+.+.
T Consensus       150 --------~~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        150 --------ASPLKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhh
Confidence                    456678999999999999999999998888  999999999999998653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-30  Score=222.13  Aligned_cols=189  Identities=21%  Similarity=0.259  Sum_probs=156.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh----hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI----AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      +.+++|+++||||++|||.++|++|++.|++|++++++.    +..++..+++...  +.++.++++|++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence            457889999999999999999999999999977776432    3334444444332  4468889999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEE-cCCcccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV-SSEGHRLAY  179 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~v-sS~~~~~~~  179 (282)
                      ++.+.++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++.+++.+       .++++++ ||..+.   
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~---  151 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGA---  151 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhcc---
Confidence            99998999999999999743  3556788999999999999999999999999864       3567765 454332   


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.+.+..|+++|+|+++|+++++.|+.+.|  |+||+|+||++.|++...
T Consensus       152 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~  199 (257)
T PRK12744        152 -------------FTPFYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYP  199 (257)
T ss_pred             -------------cCCCcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhcc
Confidence                         245678999999999999999999999888  999999999999998643

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=5.2e-30  Score=227.26  Aligned_cols=202  Identities=37%  Similarity=0.552  Sum_probs=160.9

Q ss_pred             EEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           35 IVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        35 lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      +||||++|||+++|++|++.| ++|++++|+.+..++..+++...  +.++.++++|++|.++++++++.+.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999988877776666422  346888999999999999999999888889999


Q ss_pred             EEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc-----CCccc
Q 023438          114 LINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-----EGIRF  185 (282)
Q Consensus       114 vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~-----~~~~~  185 (282)
                      +|||||+..   +..+.+.+++++.+++|+.+++.++++++|.|++..   ..+++||++||..+.....     ...++
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD---YPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCCCEEEEEeccccccccccccCCCccch
Confidence            999999753   234678899999999999999999999999998741   0157999999987643200     00000


Q ss_pred             cCC---------------CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcc-ccCccccC
Q 023438          186 DKI---------------NDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAI-ATNIIRHN  243 (282)
Q Consensus       186 ~~~---------------~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v-~t~~~~~~  243 (282)
                      +.+               ......++...|++||+|+..+++.++.++.. .|  |+|++|+||+| .|++.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~  228 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFREH  228 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCccccccc
Confidence            000               00112346678999999988889999999975 57  99999999999 78987653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=1.1e-29  Score=217.18  Aligned_cols=189  Identities=29%  Similarity=0.380  Sum_probs=165.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++++||||+||||++++++|+++|+.|++.+|+.+.+++..+.+     +.++.++.+|+++.++++++++++...
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999877766554433     346888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.+++++.+.+.++     +.+++|++||..+..        
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~--------  144 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-----RYGRIINITSVVGVT--------  144 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-----CCCEEEEECCHHhCc--------
Confidence            999999999999753  24567888999999999999999999999988764     467999999977665        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++.++++.++.++...|  +++++|+||+++|++....
T Consensus       145 -------~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~  193 (245)
T PRK12936        145 -------GNPGQANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGKL  193 (245)
T ss_pred             -------CCCCCcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhccc
Confidence                   466788999999999999999999998888  9999999999999986543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=1e-29  Score=218.11  Aligned_cols=190  Identities=28%  Similarity=0.352  Sum_probs=167.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++++|||||+++||.+++++|++.|++|++++|+.....+..+++.+.  +.++.++.+|+++.++++++++.+.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988877776666543  4468899999999999999999999888


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|++|||+|...  +..+.+.+++++.+++|+.+++.+++++.+++.+.     +.+++|++||..+..         
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~iss~~~~~---------  144 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-----GAGRIVNIASDAARV---------  144 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEECchhhcc---------
Confidence            99999999999643  34566788899999999999999999999999874     457999999987765         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.++...|+++|+|+++++++++.++...|  ++++.|+||.++|++...
T Consensus       145 ------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~  192 (250)
T TIGR03206       145 ------GSSGEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDD  192 (250)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHh
Confidence                  466778999999999999999999998888  999999999999998654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=9.5e-30  Score=219.85  Aligned_cols=196  Identities=28%  Similarity=0.327  Sum_probs=167.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||+||||.++|++|+++|++|++++|+...++...+++...  +.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5578999999999999999999999999999999999988777776666543  44688899999999999999999998


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHH-HHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||..  .+..+.+.+.+++++++|+.+++.+++++.++ +.++     +.+++|++||..+..+..   
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-----~~~~~v~~sS~~~~~~~~---  157 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-----GYGRIINVASVAGLGGNP---  157 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCC---
Confidence            889999999999964  33556788999999999999999999999998 6653     357999999976654210   


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              ...++...|+++|+++++++++++.++.++|  ++++.|+||+++|++...
T Consensus       158 --------~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~  206 (259)
T PRK08213        158 --------PEVMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRG  206 (259)
T ss_pred             --------ccccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhh
Confidence                    0113457899999999999999999999888  999999999999998653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.9e-30  Score=222.62  Aligned_cols=180  Identities=28%  Similarity=0.352  Sum_probs=158.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||+||||.+++++|+++|++|++++|+.+.++..    .+    ..+.++.+|+++.++++++++.+.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999997664433    22    136788999999999999999998888999


Q ss_pred             cEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||||..  .+..+.+.+++++.+++|+.+++.++++++|++++      ..++||++||..+..            
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~g~iv~isS~~~~~------------  135 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR------SRGLVVNIGSVSGVL------------  135 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh------cCCEEEEECCccccC------------
Confidence            9999999964  33567788999999999999999999999999976      357999999987765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                         +.++...|+++|+++++++++++.|+.+.|  |+|++|+||+++|++.+.
T Consensus       136 ---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        136 ---VTPFAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASN  183 (274)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccc
Confidence               466778999999999999999999999988  999999999999998765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=216.76  Aligned_cols=191  Identities=30%  Similarity=0.387  Sum_probs=160.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |+++||||++|||.++|+.|+++|++|+++. |+.+.++...+++...  +.++.+++||++++++++++++++.+.+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            7899999999999999999999999988765 6666666665555432  457899999999999999999999888899


Q ss_pred             ccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          111 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       111 id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +|++|||||...   ...+.+.++++..+++|+.+++.+++++++.+..+..  ++.++||++||.++..+         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~~~ii~~sS~~~~~~---------  149 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--GRGGAIVNVSSIASRLG---------  149 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcCC---------
Confidence            999999999753   2456788999999999999999999999999876311  12578999999776652         


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           ....+..|+++|+++++++++++.++.+.|  ++|+.|+||+++|++...
T Consensus       150 -----~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~  197 (248)
T PRK06947        150 -----SPNEYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHAS  197 (248)
T ss_pred             -----CCCCCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccc
Confidence                 122356899999999999999999999888  999999999999998653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=7.3e-30  Score=219.40  Aligned_cols=184  Identities=29%  Similarity=0.380  Sum_probs=162.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||+++||.+++++|++.|++|++++|+.         +...  +..+.++++|++++++++++++++.
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   71 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLL   71 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            3668899999999999999999999999999999999985         1111  3468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++++.+++++.     +.++||++||..+..      
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~ss~~~~~------  140 (252)
T PRK08220         72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-----RSGAIVTVGSNAAHV------  140 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECCchhcc------
Confidence            99999999999999753  35567889999999999999999999999999874     467999999976654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|+.++|  |+||+|+||+++|++...
T Consensus       141 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~  188 (252)
T PRK08220        141 ---------PRIGMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRT  188 (252)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhh
Confidence                     466788999999999999999999999888  999999999999998653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=1.6e-29  Score=225.43  Aligned_cols=209  Identities=33%  Similarity=0.502  Sum_probs=166.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||.+++++|++.|++|++++|+.+..++..+++...  +.++.++.+|+++.++++++++++...
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999988887777766422  346889999999999999999998877


Q ss_pred             CCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC---
Q 023438          108 HHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE---  181 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~---  181 (282)
                      ++++|+||||||+...   ..+.+.++++..+++|+.+++.++++++|+|+++..   ..++||++||.........   
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~~riV~vsS~~~~~~~~~~~~  157 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA---PDPRLVILGTVTANPKELGGKI  157 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---CCceEEEEcccccCccccCCcc
Confidence            7899999999997543   235688999999999999999999999999987510   1269999999765431100   


Q ss_pred             ----CccccCC-------------CCCCCCCCCccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcc-ccCcccc
Q 023438          182 ----GIRFDKI-------------NDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAI-ATNIIRH  242 (282)
Q Consensus       182 ----~~~~~~~-------------~~~~~~~~~~~y~asK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v-~t~~~~~  242 (282)
                          ...++++             ....+..+...|+.||.+...+++.+++++. ..|  |+|++|+||.| .|++.++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        158 PIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             CCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCccccc
Confidence                0011110             0112344567899999999999999999995 357  99999999999 5998765


Q ss_pred             C
Q 023438          243 N  243 (282)
Q Consensus       243 ~  243 (282)
                      .
T Consensus       236 ~  236 (322)
T PRK07453        236 T  236 (322)
T ss_pred             C
Confidence            4

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.97  E-value=1.8e-29  Score=215.45  Aligned_cols=186  Identities=25%  Similarity=0.339  Sum_probs=159.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++||||++|||.++|++|+++|++|++++|+ .+..+...+++.+.  +.++.++++|+++.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998865 45556666666554  45789999999999999999999888889999


Q ss_pred             EEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          113 ILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       113 ~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|||+|....  ..+.+.++++.++++|+.+++.++++++ |.++++     +.++||++||.++..            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~------------  141 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-----QGGRIITLASVSGVM------------  141 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-----CCeEEEEEcchhhcc------------
Confidence            99999997533  4467889999999999999999999875 555443     357999999987765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++...|+++|+++++++++++.|+.++|  |+|++|+||+++|++.+..
T Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  190 (239)
T TIGR01831       142 ---GNRGQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEV  190 (239)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhh
Confidence               467788999999999999999999999888  9999999999999997743

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=218.93  Aligned_cols=189  Identities=31%  Similarity=0.352  Sum_probs=168.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||+++||.+++++|++.|++|++++|+.+..+...+++...  +.++.++.+|++++++++++++.+...+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988887777776553  4578899999999999999999999988


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|+||||||...  ...+.+.++++..+++|+.+++.+++.+++++++.     +.++||++||..+..         
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~---------  145 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-----GGGRIINMASVHGLV---------  145 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCeEEEEEcchhhcc---------
Confidence            99999999999643  35567888999999999999999999999999875     467999999977665         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                            +.++...|+++|++++.+++.++.++...|  |+|++++||.++||+..
T Consensus       146 ------~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        146 ------GSAGKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVR  192 (258)
T ss_pred             ------CCCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhh
Confidence                  567889999999999999999999998888  99999999999999865

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.7e-29  Score=214.80  Aligned_cols=192  Identities=24%  Similarity=0.284  Sum_probs=166.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++++||||++|||.+++++|+++|++|++++|+...+++..+++.+.  +.++.++++|+++.++++++++.+.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988888777776554  457889999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCC--C---------CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438          108 HHQLNILINNAGIMGT--P---------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      ++++|++|||||....  .         .+.+.+++..++++|+.+++.+++.+.+.+.+..    .++.|+++||... 
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~----~~~~iv~~ss~~~-  154 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG----SKGVIINISSIAR-  154 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEccccc-
Confidence            8899999999996432  1         4567789999999999999999999999997641    3468999988543 


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .               +.++...|+++|+|+++++++|+.++.+.|  +++++|+||.++|++....
T Consensus       155 ~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~  204 (253)
T PRK08217        155 A---------------GNMGQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAM  204 (253)
T ss_pred             c---------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCcccccc
Confidence            2               356778999999999999999999998888  9999999999999987643

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=4e-29  Score=214.76  Aligned_cols=182  Identities=23%  Similarity=0.363  Sum_probs=159.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+||||.++|++|+++|++|++++|+.+.++...+.+     +.++.++.+|+++.++++.+++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999987765554433     3468899999999999999999998888999


Q ss_pred             cEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          112 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       112 d~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |++|||||..   .+..+.+.+++++++++|+.+++.+++++++++.+.     +.++||++||..+..           
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-----------  139 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSW-----------  139 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCcccCC-----------
Confidence            9999999964   235567889999999999999999999999999874     457999999976654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                          +.++...|+++|++++++++.++.++.+.|  |+|++|+||.+.|+.+
T Consensus       140 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        140 ----PYAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEF  185 (248)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeeccccc
Confidence                466778999999999999999999999888  9999999999985544

>PRK12742 oxidoreductase; Provisional

Probab=99.97  E-value=3e-29  Score=213.67  Aligned_cols=181  Identities=28%  Similarity=0.338  Sum_probs=150.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++|++|||||+||||+++|++|++.|++|+++++. .+..++..    +..   .+.++.+|++|.+++.+.++.   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~---~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA----QET---GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHh---CCeEEecCCCCHHHHHHHHHH---
Confidence            3678999999999999999999999999999888764 33333322    221   356788999999888777653   


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                       ++++|++|||||...  ...+.+.+++++.+++|+.+++.+++++.+++.+       .+++|++||..+...      
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~------  138 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRM------  138 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccC------
Confidence             468999999999753  3557788999999999999999999999999864       479999999765321      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|++++++++.++.++.+.|  |+||+|+||+++|++...
T Consensus       139 --------~~~~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        139 --------PVAGMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPA  186 (237)
T ss_pred             --------CCCCCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCcccc
Confidence                    456788999999999999999999999988  999999999999998654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=218.87  Aligned_cols=185  Identities=29%  Similarity=0.390  Sum_probs=160.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .|++|||||+||||++++++|++.|++|++++|+.+.++...+.    . +.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----Y-GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c-cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            37899999999999999999999999999999997765544333    2 236889999999999999999998888889


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||...  +..+.+.+++++.+++|+.+++.++++++|++++.     +.++||++||..+..           
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  140 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-----GGGRIVQVSSEGGQI-----------  140 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccc-----------
Confidence            999999999753  35566788999999999999999999999999874     457999999976554           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.++...|+++|+++++++++++.++.+.|  ++++.|+||.+.|++...
T Consensus       141 ----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        141 ----AYPGFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCccc
Confidence                467788999999999999999999998888  999999999999987543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.9e-30  Score=215.64  Aligned_cols=170  Identities=19%  Similarity=0.137  Sum_probs=144.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||++|||++++++|++.|++|++++|+.+.++...+++       ++.++++|++++++++++++.+..   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            5899999999999999999999999999999987765554432       356788999999999999887742   689


Q ss_pred             EEEEcCCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          113 ILINNAGIMG----T----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       113 ~vi~~ag~~~----~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|||||...    +    ..+ +.++|++.+++|+.++++++|+++|+|++       +|+||++||.+          
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~----------  133 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPEN----------  133 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCC----------
Confidence            9999998421    1    122 46889999999999999999999999964       47999999853          


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               .+....|+++|+|+.+|+++++.|+.++|  |+||+|+||+++|++.+
T Consensus       134 ---------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~  179 (223)
T PRK05884        134 ---------PPAGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYD  179 (223)
T ss_pred             ---------CCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhh
Confidence                     23457899999999999999999999999  99999999999999754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-30  Score=247.81  Aligned_cols=194  Identities=28%  Similarity=0.284  Sum_probs=170.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .-++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888887777554  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC--CCcC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          106 IQHHQLNILINNAGIMGT--PFML--SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.++++|++|||||....  ..+.  +.+++++.+++|+.+++.+++.++|+|+++     +.++||++||.++..    
T Consensus       444 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~----  514 (657)
T PRK07201        444 AEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-----RFGHVVNVSSIGVQT----  514 (657)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcC----
Confidence            999999999999996422  2221  257899999999999999999999999875     468999999987765    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++.+.|+++|+++++|+++++.|+.+.|  |+||+|+||+++|++....
T Consensus       515 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~~  563 (657)
T PRK07201        515 -----------NAPRFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAPT  563 (657)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCcc
Confidence                       467788999999999999999999999888  9999999999999997643

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=215.83  Aligned_cols=186  Identities=24%  Similarity=0.311  Sum_probs=161.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||++|||.+++++|+++|++|++++|+.+..+...+++.... +.++.++++|++++++++++++.+..   ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            689999999999999999999999999999999888777776665432 45789999999999999999988754   46


Q ss_pred             cEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||+|....  ..+.+.+++.+.+++|+.+++.+++++.+++.+.     +.++++++||..+..            
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------------  140 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-----GSGTIVGISSVAGDR------------  140 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecccccC------------
Confidence            999999996532  4567888999999999999999999999999875     468999999976654            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++...|+++|+++++++++++.|+.+.|  ++|++|+||+++|++.+..
T Consensus       141 ---~~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        141 ---GRASNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhcc
Confidence               456778899999999999999999999888  9999999999999986654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1.7e-30  Score=221.47  Aligned_cols=210  Identities=26%  Similarity=0.308  Sum_probs=178.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~~~  108 (282)
                      -|++++||||+.|||++.|++||++|++|++++|++++++.+.+++.++++ ..+.++.+|.++.++ .+++.+.+.  .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~--~  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLA--G  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhc--C
Confidence            359999999999999999999999999999999999999999999999986 789999999998776 333444332  2


Q ss_pred             CCccEEEEcCCCCC--C--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 HQLNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 g~id~vi~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++.++|||+|...  |  +.+.+.+.+.+.+++|..+...+++.++|.|.++     ++|-|++++|.++..       
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-----~~G~IvnigS~ag~~-------  192 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-----KKGIIVNIGSFAGLI-------  192 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-----CCceEEEeccccccc-------
Confidence            37889999999754  2  4456666889999999999999999999999986     689999999998887       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCL  264 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~  264 (282)
                              |.|.++.|+++|+.++.|+++|..|+..+|  |.|.+|.|..|.|+|.......     +....|+.+++..
T Consensus       193 --------p~p~~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~~~s-----l~~ps~~tfaksa  257 (312)
T KOG1014|consen  193 --------PTPLLSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYRKPS-----LFVPSPETFAKSA  257 (312)
T ss_pred             --------cChhHHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccCCCC-----CcCcCHHHHHHHH
Confidence                    799999999999999999999999999999  9999999999999998865422     2234566666666


Q ss_pred             ccChH
Q 023438          265 LKNVQ  269 (282)
Q Consensus       265 ~~~~~  269 (282)
                      +.+..
T Consensus       258 l~tiG  262 (312)
T KOG1014|consen  258 LNTIG  262 (312)
T ss_pred             HhhcC
Confidence            55544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=2.8e-29  Score=218.10  Aligned_cols=190  Identities=21%  Similarity=0.210  Sum_probs=152.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHH----HHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV----RNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i----~~~~~~i~~  106 (282)
                      ++++||||++|||++++++|+++|++|++++| +.+.++...+++.... +.++.++.+|++|++++    +++++.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999998765 4566666666664433 34577899999999865    556666667


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCCh-----------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCeEEEEcC
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSS  172 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-~~~~~g~iv~vsS  172 (282)
                      .++++|+||||||...+  ..+.+.           +++.+++++|+.+++.+++++++++..... ..+..++|++++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            78999999999996432  222232           358899999999999999999999865321 1123468999998


Q ss_pred             CcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          173 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ..+..               +.+++.+|+++|+|+++++++|+.|+.+.|  |+||+|+||+++||.
T Consensus       161 ~~~~~---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~  210 (267)
T TIGR02685       161 AMTDQ---------------PLLGFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPD  210 (267)
T ss_pred             hhccC---------------CCcccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCcc
Confidence            76654               577888999999999999999999999988  999999999998773

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=215.61  Aligned_cols=188  Identities=34%  Similarity=0.422  Sum_probs=162.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++++++||||+||||.++|++|+++|++|++. .|+.+..++..+++.+.  +.++.++.+|++|++++.++++++...
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999998775 78877766666666443  346889999999999999999998876


Q ss_pred             C------CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          108 H------HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       108 ~------g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +      +++|++|||||....  ..+.+.+.++..+++|+.+++.+++++++++.+       .+++|++||..+..  
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~--  152 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRL--  152 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcC--
Confidence            5      479999999997533  556788999999999999999999999999864       36999999976654  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|+++|++++.++++++.++.+.|  ++|++|+||+++|++...
T Consensus       153 -------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        153 -------------GFTGSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             -------------CCCCCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhh
Confidence                         467788999999999999999999998888  999999999999998654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=215.34  Aligned_cols=179  Identities=25%  Similarity=0.278  Sum_probs=153.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||++|||.+++++|+++|++|++++|+.+.+++..+    .  ..++.++++|+++.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----Q--SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----h--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            789999999999999999999999999999999766544332    2  23688899999999999999887642   47


Q ss_pred             cEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|+|||....  ..+.+.+++++.+++|+.+++.+++++.|++.+       ++++|++||..+..            
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~------------  133 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASEL------------  133 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhcc------------
Confidence            999999986432  234688899999999999999999999999864       46899999977665            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++...|+++|++++++++.++.|+.+.|  +++++|+||+++|++.+..
T Consensus       134 ---~~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~  182 (240)
T PRK06101        134 ---ALPRAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKN  182 (240)
T ss_pred             ---CCCCCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCC
Confidence               467788999999999999999999999988  9999999999999987654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=4e-29  Score=214.80  Aligned_cols=189  Identities=36%  Similarity=0.435  Sum_probs=161.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh--HHHHHHHHHHhCCC-CceeEEEccCCC-HHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPS-AKVDAMELDLSS-LASVRNFASE  103 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~--~~~~~~~l~~~~~~-~~v~~~~~Dvs~-~~~i~~~~~~  103 (282)
                      .+++++++||||++|||+++|++|++.|++|+++.++...  .+...+...  ..+ ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            5688999999999999999999999999998888887654  233333322  112 367888899998 9999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +...+|++|++|||||...   +..+.+.+++++++++|+.+++.+++.+.|++++      +  +||++||..+. .  
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~------~--~Iv~isS~~~~-~--  148 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK------Q--RIVNISSVAGL-G--  148 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh------C--eEEEECCchhc-C--
Confidence            9999999999999999763   5778888999999999999999999988888883      2  99999997765 3  


Q ss_pred             CCccccCCCCCCCCCC-CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          181 EGIRFDKINDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                   .++ +..|++||+|+.+|++.++.|+.+.|  |+|++|+||.++|++.+...
T Consensus       149 -------------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~  198 (251)
T COG1028         149 -------------GPPGQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALE  198 (251)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhh
Confidence                         333 58999999999999999999999999  99999999999999988643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-29  Score=214.87  Aligned_cols=189  Identities=28%  Similarity=0.332  Sum_probs=166.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|+++||||++|||.+++++|++.|++ |++++|+.+......+++.+.  +.++.++.+|+++++++.++++.+.+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            68899999999999999999999999998 999999987777666666433  457888999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||+|....  ..+.+.++++..+++|+.+++.+++++++++.++.    ..+++|++||..+..        
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~ss~~~~~--------  149 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK----AEGTIVNIGSMSAHG--------  149 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCEEEEECCccccc--------
Confidence            8999999999997532  45678899999999999999999999999997641    247999999977654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                             +.+....|+++|+++++++++++.|+...+  |+|++|+||+++|++.
T Consensus       150 -------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        150 -------GQPFLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGE  195 (260)
T ss_pred             -------CCCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcch
Confidence                   456778999999999999999999999888  9999999999999974

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.1e-29  Score=215.15  Aligned_cols=191  Identities=25%  Similarity=0.271  Sum_probs=166.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC--CHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs--~~~~i~~~~~~i~  105 (282)
                      .+++|+++||||+++||.+++++|++.|++|++++|+.+..++..+++.+.. ..++.++.+|++  +.+++.++++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999888777777765532 345677778886  7899999999999


Q ss_pred             hcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +.++++|+||||||...   +..+.+.+++++.+++|+.+++.+++++++++.++     +.++|+++||..+..     
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~-----  157 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-----PAASLVFTSSSVGRQ-----  157 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEEccHhhcC-----
Confidence            88899999999999643   34567889999999999999999999999999875     467999999977655     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|++++++++.++.++...|  +++++|+||.++|++..
T Consensus       158 ----------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        158 ----------GRANWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRA  204 (247)
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchh
Confidence                      467788999999999999999999998888  99999999999999754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=1.2e-28  Score=210.80  Aligned_cols=188  Identities=32%  Similarity=0.335  Sum_probs=160.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |+++||||+++||.++|++|+++|++|++++|+... ..+..+.+..  .+.++.++.+|+++.++++++++.+.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998541 2222222211  1346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||+|...  ...+.+.+++++.+++|+.+++.+++.+++++++.     +.++||++||..+..           
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~-----------  144 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-----GYGRIINISSVNGLK-----------  144 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEECChhhcc-----------
Confidence            999999999753  35677899999999999999999999999999875     467999999977654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          +.++...|+++|++++++++.++.++.+.|  +++++|+||.++|++.+..
T Consensus       145 ----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~  193 (245)
T PRK12824        145 ----GQFGQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQM  193 (245)
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhc
Confidence                467788999999999999999999998888  9999999999999987643

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.1e-29  Score=216.04  Aligned_cols=190  Identities=26%  Similarity=0.336  Sum_probs=165.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+.+..+++...  +.++.++.+|+++++++.++++++...
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999887766665555443  346888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  ...+.+.+++++.+++|+.+++.+++++++.+.++     +.++||++||..+..        
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~g~iv~isS~~~~~--------  151 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-----RRGDLIFVGSDVALR--------  151 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECChHhcC--------
Confidence            899999999999753  34567889999999999999999999999998864     467999999976654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                             +.++...|+++|++++++++.++.++...|  |++++|+||+++|++..
T Consensus       152 -------~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        152 -------QRPHMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGW  198 (274)
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccc
Confidence                   456677899999999999999999998888  99999999999999754

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=212.14  Aligned_cols=186  Identities=23%  Similarity=0.285  Sum_probs=157.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+|++|||||++|||++++++|++.|++|+++++ +.+..+...+++...  +.++.++.+|++|.+++.++++++...+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999988765 445555566555443  4568899999999999999999998888


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|+||||||...  +..+.+++++++.+++|+.+++.+++++.+++.+.     ..+++|+++|..+..         
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~~s~~~~~---------  151 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-----ARGLVVNMIDQRVWN---------  151 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECchhhcC---------
Confidence            99999999999753  35577889999999999999999999999998864     467999998865432         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                            +.+.+..|+++|+++++++++++.++.+ +  |+|++|+||++.|+..
T Consensus       152 ------~~p~~~~Y~~sK~a~~~~~~~la~~~~~-~--i~v~~i~PG~v~t~~~  196 (258)
T PRK09134        152 ------LNPDFLSYTLSKAALWTATRTLAQALAP-R--IRVNAIGPGPTLPSGR  196 (258)
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhcC-C--cEEEEeecccccCCcc
Confidence                  3556678999999999999999999975 3  9999999999988753

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.9e-30  Score=206.44  Aligned_cols=183  Identities=26%  Similarity=0.296  Sum_probs=165.2

Q ss_pred             CCCEEEEecCC-ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh-c
Q 023438           30 SGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-Q  107 (282)
Q Consensus        30 ~~~~~lItG~s-~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~-~  107 (282)
                      +.|.++|||+| ||||.++|++|++.|+.|+.++|..+.+.++..+.       .+..+..|+++++++.+...++.. .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-------gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-------GLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-------CCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45899999977 99999999999999999999999988887776443       478899999999999999999877 7


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+++||||..  .+..|.+.++.++.|++|+.|.+.++|++...+.+      .+|.||++.|..++.        
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik------aKGtIVnvgSl~~~v--------  144 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK------AKGTIVNVGSLAGVV--------  144 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH------ccceEEEecceeEEe--------
Confidence            89999999999974  56778999999999999999999999999977776      489999999988887        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             |.|..+.|++||+|+.++++.|+.|+++.|  |+|..+-||-|.|++...
T Consensus       145 -------pfpf~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  145 -------PFPFGSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             -------ccchhhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence                   688889999999999999999999999999  999999999999998664

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=2.2e-28  Score=208.73  Aligned_cols=187  Identities=28%  Similarity=0.353  Sum_probs=162.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |++|||||++|||.++|++|+++|++|++++| +....++..+++...  +.++.++.+|++++++++.+++.+.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 555555555544332  446889999999999999999999998899


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||....  ..+.+.+++++.+++|+.+++.+++++++++++.     +.++||++||..+..           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~-----------  142 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-----GWGRIINISSVNGQK-----------  142 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcC-----------
Confidence            9999999997533  4567889999999999999999999999999875     457999999976654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.+++..|+++|++++.++++++.++...|  ++++.|+||+++|++.+.
T Consensus       143 ----~~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~  190 (242)
T TIGR01829       143 ----GQFGQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMA  190 (242)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccc
Confidence                466788999999999999999999998888  999999999999998764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.9e-28  Score=209.63  Aligned_cols=194  Identities=34%  Similarity=0.391  Sum_probs=169.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++++++++||||+++||.+++++|++.|++|+++ +|+.+......+.+...  +.++.++.+|+++++++.++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            35778999999999999999999999999999998 99988777776666543  4568899999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++||++|...  +..+.+.+++++.+++|+.+++.+++++.+.+.+.     +.+++|++||..+..      
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~------  147 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-----KSGVIVNISSIWGLI------  147 (247)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHhhcc------
Confidence            88899999999999753  24567889999999999999999999999999874     467899999977655      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                               +.+....|+.+|++++.++++++.++...|  +++++|+||.++|++.+...
T Consensus       148 ---------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        148 ---------GASCEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccC
Confidence                     456677899999999999999999998888  99999999999999876543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.3e-29  Score=211.99  Aligned_cols=176  Identities=30%  Similarity=0.323  Sum_probs=150.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||.+++++|++.|++|++++|+....      .     ..++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHH
Confidence            357899999999999999999999999999999999975321      0     23578899999986      344444


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++++++.+.++     +.++||++||..+..      
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------  132 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-----KSGIIINMCSIASFV------  132 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcc------
Confidence            567899999999964   335677889999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+++++++++++.|+.+.|  |+||+|+||+++|++..
T Consensus       133 ---------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        133 ---------AGGGGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             ---------CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCcccc
Confidence                     466788999999999999999999999888  99999999999999865

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1e-28  Score=212.82  Aligned_cols=193  Identities=25%  Similarity=0.286  Sum_probs=162.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|+++||||++|||.++|++|+++|++|++++|+. +......+.+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999999999874 3444444444332  34689999999999999999999999999


Q ss_pred             CccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCeEEEEcCCcccccccCCcc
Q 023438          110 QLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS-GGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       110 ~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|||||...    ++.+.+.+++++.+++|+.+++.+++++.+.|.++.... ...++|+++||..+..       
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  152 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-------  152 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc-------
Confidence            9999999999742    245678899999999999999999999999998752110 0145799999977665       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|++++++++.++.++.++|  ++|++|+||.++|++...
T Consensus       153 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        153 --------VSPNRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccc
Confidence                    466778999999999999999999999888  999999999999998654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.97  E-value=7.5e-29  Score=201.77  Aligned_cols=198  Identities=33%  Similarity=0.417  Sum_probs=159.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEE-EEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii-~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .-+.++||||++|||..++++|.+. |-.+++ ..|+.+...+..+.....  ..+++.++.|+++.+++++.++++..-
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhh
Confidence            3467999999999999999999974 556554 456676653333322222  568999999999999999999999886


Q ss_pred             --CCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCeEEEEcCCccc
Q 023438          108 --HHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHR  176 (282)
Q Consensus       108 --~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~------~~~~g~iv~vsS~~~~  176 (282)
                        ...++++|+|||+..+   ..+.+.+.|.+.+++|..++.+++|+|+|++++....      .-.++.||++||..+.
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence              5679999999997533   4556778899999999999999999999999986432      1235689999997765


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .+.            ....++.+|..||+|+++|+++++.|+++++  |-|..+|||+|.|+|....
T Consensus       160 ~~~------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  160 IGG------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             cCC------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCC
Confidence            431            1345678999999999999999999999988  9999999999999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-28  Score=212.85  Aligned_cols=187  Identities=27%  Similarity=0.325  Sum_probs=164.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++++||||+||||.+++++|++.|++|++++|+....+...+++...  +.++.++.+|++|.++++.+++.+..++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988877777666553  457889999999999999999999888899


Q ss_pred             ccEEEEcCCCCCC--CCcC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          111 LNILINNAGIMGT--PFML-SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +|++|||||....  ..+. +.+++.+.+++|+.+++.+++++.+++.+      +.+++|++||..+..          
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------~~~~iv~~sS~~~~~----------  142 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA------SRGQIVVVSSLAGLT----------  142 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh------cCCEEEEEecccccC----------
Confidence            9999999996532  4455 78889999999999999999999999876      357999999977654          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++...|+++|++++++++.++.++...+  +++++|.||.+.|++.+.
T Consensus       143 -----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~  190 (263)
T PRK06181        143 -----GVPTRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKR  190 (263)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchh
Confidence                 466778999999999999999999999888  999999999999998653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=7e-31  Score=204.92  Aligned_cols=203  Identities=30%  Similarity=0.354  Sum_probs=179.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ...||-+++||||.+|+|++.|++|++.|+.|++.+..+++..+..+++     +.++.+.++|+++++++...+...+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh
Confidence            3468899999999999999999999999999999999999988888887     77899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCeEEEEcCCcccc
Q 023438          107 QHHQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-~~~~~g~iv~vsS~~~~~  177 (282)
                      +||++|.++||||+..        ....-+.|++.+.+++|++++|+++++-.-.|..+.+ +.+++|.||+..|.+++.
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            9999999999999631        1234578999999999999999999999999987654 457789999999988776


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHH
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL  253 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  253 (282)
                                     +.-++++|++||.++.+|+--++++++..|  ||+++|.||.++||+....  ++....+.
T Consensus       160 ---------------gq~gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllssl--pekv~~fl  216 (260)
T KOG1199|consen  160 ---------------GQTGQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSL--PEKVKSFL  216 (260)
T ss_pred             ---------------CccchhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhh--hHHHHHHH
Confidence                           688899999999999999999999999999  9999999999999998744  44444443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=7.4e-29  Score=211.14  Aligned_cols=192  Identities=26%  Similarity=0.250  Sum_probs=176.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +.++|||||+|||+++|.++..+|++|.++.|+.+++.++.+++.-...-.++.+..+|++|.+++..+++++...++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            79999999999999999999999999999999999999999998765544458899999999999999999999999999


Q ss_pred             cEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |.+|+|||..  +.+.+.+.++++..+++|+.++++++++.++.|++..    +.|+|+++||.++..            
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~----~~g~I~~vsS~~a~~------------  177 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE----HLGRIILVSSQLAML------------  177 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc----cCcEEEEehhhhhhc------------
Confidence            9999999964  4478899999999999999999999999999999862    256999999988877            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                         +..++++|+++|+|+.+++..+++|+.+.|  |.|.++.|+.++||.+....
T Consensus       178 ---~i~GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En  227 (331)
T KOG1210|consen  178 ---GIYGYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFEREN  227 (331)
T ss_pred             ---CcccccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCcccccc
Confidence               699999999999999999999999999998  99999999999999877653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=5.4e-28  Score=206.95  Aligned_cols=190  Identities=32%  Similarity=0.410  Sum_probs=160.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++++||||+||||.+++++|+++|++|+++ .|+.+...+...++...  +.++..+++|++|+++++++++++...+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999998774 67776666666665443  446888999999999999999999988999


Q ss_pred             ccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          111 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       111 id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +|++|||||...   ...+.+.++++..+++|+.+++.+++++++.+.+...  +++++||++||..+..          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~~v~~sS~~~~~----------  147 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG--GSGGAIVNVSSAASRL----------  147 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcc----------
Confidence            999999999642   2456788899999999999999999999999887421  2357899999977655          


Q ss_pred             CCCCCCCCC-CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++ +..|+++|++++++++.++.|+.+.|  +++++|+||.++||+...
T Consensus       148 -----~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~  196 (247)
T PRK09730        148 -----GAPGEYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHAS  196 (247)
T ss_pred             -----CCCCcccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCccccc
Confidence                 2333 46799999999999999999998888  999999999999998654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-28  Score=207.79  Aligned_cols=191  Identities=29%  Similarity=0.340  Sum_probs=161.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC----hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~----~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +++++++||||+||||+++|++|+++|++|++++|.    .+..++..+++...  +.++.++.+|+++.++++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999997764    33334444444332  346889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      ...++++|++|||||...  ...+.+.++++..+++|+.+++.+++++. +.+++.     +.+++|++||..+..    
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~~sS~~~~~----  152 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-----RGGRIVNIASVAGVR----  152 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-----CCeEEEEECCchhcC----
Confidence            888889999999999754  35567889999999999999999999999 555543     357899999977665    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++...|+.+|++++.+++.++.++.+.|  +++++|+||+++|++....
T Consensus       153 -----------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~  201 (249)
T PRK12827        153 -----------GNRGQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNA  201 (249)
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCccccc
Confidence                       466788999999999999999999998888  9999999999999986643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=2.1e-28  Score=236.92  Aligned_cols=190  Identities=27%  Similarity=0.334  Sum_probs=167.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.++...+++.+.+...++..+++|++|++++.++++++..
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888877777776554344678899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+|++|++|||||...  +..+.+.++|+..+++|+.+++.+++++++.++++.    .+++||++||..+..       
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~----~~g~IV~iSS~~a~~-------  558 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG----LGGNIVFIASKNAVY-------  558 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEEeChhhcC-------
Confidence            9999999999999753  355678899999999999999999999999998741    257999999977665       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  237 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  237 (282)
                              +.++...|+++|+++++++++++.|+.+.|  |+||+|+||.+.+
T Consensus       559 --------~~~~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~  601 (676)
T TIGR02632       559 --------AGKNASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQ  601 (676)
T ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceec
Confidence                    466788999999999999999999999988  9999999999865

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-28  Score=209.11  Aligned_cols=186  Identities=31%  Similarity=0.385  Sum_probs=157.8

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ++.+++++++++||||+++||.++++.|++.|++|++++|+.+..++..++.       .+.++.+|+++.++++++++.
T Consensus         2 ~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          2 NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999977655443322       356788999999988887775


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                          .+++|++|||||...  ...+.+.+++++.+++|+.+++.+++++++.+.+.    +..++||++||..+..    
T Consensus        75 ----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~----  142 (245)
T PRK07060         75 ----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA----GRGGSIVNVSSQAALV----  142 (245)
T ss_pred             ----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCCcEEEEEccHHHcC----
Confidence                468999999999753  34567888999999999999999999999998763    1247999999977665    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                 +.+....|+++|++++.+++.++.++.+.|  +++++|+||+++|++.+
T Consensus       143 -----------~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        143 -----------GLPDHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             -----------CCCCCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhh
Confidence                       466788999999999999999999998888  99999999999999865

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.96  E-value=7e-28  Score=206.62  Aligned_cols=191  Identities=30%  Similarity=0.378  Sum_probs=167.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+......+++.+.  +.++.++.+|++|.++++++++++...+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999988777777776554  3468899999999999999999999889


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc-ccccCCccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~  185 (282)
                      +++|+||||+|....  ..+.+.+++.+.++.|+.+++.+++++++++.+.     +.+++|++||..+. .        
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~ss~~~~~~--------  148 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-----GGGRIVLTSSVAGPRV--------  148 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechHhhcc--------
Confidence            999999999997543  4467888999999999999999999999999875     45799999997665 2        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|++++++++.++.++...|  ++++.|+||.++||..+..
T Consensus       149 -------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        149 -------GYPGLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhc
Confidence                   456778999999999999999999998888  9999999999999986643

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=9e-29  Score=199.62  Aligned_cols=161  Identities=39%  Similarity=0.508  Sum_probs=145.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC--hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~--~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |+++||||++|||+++|++|+++|+ .|++++|+  .+..+++.+++...  +.++.++++|++++++++++++++...+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            6899999999999999999999976 78899999  77777787887754  5689999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|++|||||....  ..+.+.+++++++++|+.+++.+.++++|   +      +.++||++||..+..         
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~------~~g~iv~~sS~~~~~---------  140 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q------GGGKIVNISSIAGVR---------  140 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H------TTEEEEEEEEGGGTS---------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee---c------cccceEEecchhhcc---------
Confidence            999999999997643  56678899999999999999999999999   2      478999999988876         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHh
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRL  218 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~  218 (282)
                            |.+++..|+++|+|+++|+++++.|+
T Consensus       141 ------~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  141 ------GSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ------SSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                  68999999999999999999999997

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.4e-28  Score=208.92  Aligned_cols=189  Identities=22%  Similarity=0.253  Sum_probs=160.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++++++|||||++|||++++++|+++|++|++..|+ ........+.+.+.  +.++.++.+|+++++++..+++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999998887754 34444444444433  3467889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++++.+++++       .++||++||..++.      
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~------  146 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIR------  146 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccC------
Confidence            9899999999999964  33456677888999999999999999999999865       47999999987664      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++++++.++.|+.+ +  ++++.|.||+++|++...
T Consensus       147 ---------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~  193 (252)
T PRK06077        147 ---------PAYGLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGES  193 (252)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHh
Confidence                     5778889999999999999999999987 6  999999999999998543

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.7e-28  Score=207.61  Aligned_cols=185  Identities=27%  Similarity=0.292  Sum_probs=160.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++||||++|||.+++++|++.|++|++++|+....+...+++.    +.++.++.+|++|.+++..+++++..++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999999877766655552    346889999999999999999999888899


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||+|...  +..+.+.+++...+++|+.+++.+++++++.+.++     +.++|+++||..+..           
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----------  141 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-----SRGAVVNIGSVNGMA-----------  141 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcC-----------
Confidence            999999999753  34567889999999999999999999999999874     467999999965432           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           ..+...|+.+|++++.++++++.+++++|  ++|++++||+++|++...
T Consensus       142 -----~~~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~  188 (257)
T PRK07074        142 -----ALGHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWEA  188 (257)
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhhc
Confidence                 23456899999999999999999999988  999999999999998653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-28  Score=210.74  Aligned_cols=186  Identities=23%  Similarity=0.317  Sum_probs=153.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |+++||||+||||+++|++|+++|++|++++|+. +.++    ++.+.. +.++.++.+|++++++++++++++...++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999986 3322    222222 346889999999999999999998766542


Q ss_pred             --c--cEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          111 --L--NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       111 --i--d~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        +  .++|+|||...   ++.+.+.+++.+.+++|+.+++.+++++++++++.    +..++||++||..+..      
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~------  146 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW----KVDKRVINISSGAAKN------  146 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc----CCCceEEEecchhhcC------
Confidence              2  28999999643   35678899999999999999999999999999863    1347999999976654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+|++++++.++.|++....+|+|++|+||+++|++..
T Consensus       147 ---------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        147 ---------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             ---------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence                     5677889999999999999999999864322399999999999999855

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=205.12  Aligned_cols=177  Identities=29%  Similarity=0.337  Sum_probs=153.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++|+++||||+++||++++++|+++|++|++++|+...          ..   ...++.+|+++.++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999999999998653          01   12467899999999999999988776


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                       ++|++|||+|....  ..+.+.+++.+.+++|+.+++.+++++++++++.     +.++||++||....          
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~----------  131 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-----EQGRIVNICSRAIF----------  131 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcccccc----------
Confidence             68999999997533  4466889999999999999999999999999875     46799999997532          


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.+....|+++|+++++++++++.|+.+.|  |++++|+||+++|+++..
T Consensus       132 ------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        132 ------GALDRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCccccc
Confidence                  345678999999999999999999999888  999999999999998764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=204.27  Aligned_cols=189  Identities=26%  Similarity=0.360  Sum_probs=165.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.+++++||||+|+||.+++++|++.|++|++++|+.+.+.+..+++.+.   .++.++.+|+++.+++..+++++.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988877776666542   368899999999999999999998888


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|+|||++|...  ...+.+.+++++.+++|+.+++.+++++++.+.+      +.++||++||..+..         
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~---------  145 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------GGGYIINISSLAGTN---------  145 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------CCeEEEEECChhhcc---------
Confidence            99999999999653  3456788999999999999999999999999843      357999999976654         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            +.++...|+++|++++++++.++.|+...|  +++++|+||.+.|++....
T Consensus       146 ------~~~~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~~  194 (237)
T PRK07326        146 ------FFAGGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGHT  194 (237)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCcccccc
Confidence                  456677899999999999999999998888  9999999999999986543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.9e-28  Score=204.71  Aligned_cols=190  Identities=26%  Similarity=0.289  Sum_probs=165.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||+|+||.+++++|+++|++|++++|+.....+..+++...    .+..+.+|++|.++++.+++.+.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999987776666555432    466788999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|+|||++|...  ...+.+.+++++.+++|+.+++.+++++++.+.++     +.+++|++||..+..       
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~-------  146 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-----GGGRIVNIGAGAALK-------  146 (239)
T ss_pred             HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-----CCCEEEEECchHhcc-------
Confidence            9999999999999653  24566888999999999999999999999999875     467999999977654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|++++.+++.++.++...|  +++++|+||.++|++...
T Consensus       147 --------~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~~  194 (239)
T PRK12828        147 --------AGPGMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNRA  194 (239)
T ss_pred             --------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchhh
Confidence                    456778999999999999999999998888  999999999999996543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=1.7e-27  Score=203.61  Aligned_cols=193  Identities=34%  Similarity=0.415  Sum_probs=164.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +.+++++++||||+|+||.+++++|++.|++|+++.|+... .....+++...  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999888876543 44444444433  4578899999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|++||+||....  ..+.+.+++++.+++|+.+++.+.+++.+++.+.     +.++++++||..+..      
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~iss~~~~~------  147 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-----RSGRIINISSVVGLM------  147 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcccccCc------
Confidence            888999999999997533  4567888999999999999999999999999874     357899999976554      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|++++.+++.++.++...+  +++++|+||+++|++.+..
T Consensus       148 ---------~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~  196 (248)
T PRK05557        148 ---------GNPGQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDAL  196 (248)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCcccccc
Confidence                     456788899999999999999999998888  9999999999999987654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.9e-28  Score=204.10  Aligned_cols=183  Identities=26%  Similarity=0.326  Sum_probs=153.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||++|||.+++++|++.|++|++++|+....+.. +++      .++.++.+|++|+++++++++.+..  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~------~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL------PGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc------cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            7899999999999999999999999999999997764432 111      2467788999999999999998854  479


Q ss_pred             cEEEEcCCCCCC----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          112 NILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       112 d~vi~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      |++|||||....    ..+.+.+++.+.+++|+.+++.+++++++++++      ..+.++++||..+...         
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~ss~~g~~~---------  137 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP------GQGVLAFMSSQLGSVE---------  137 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh------cCCEEEEEccCccccc---------
Confidence            999999997532    456788999999999999999999999999875      3478999998655431         


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         ..+..++..|+++|++++.+++.++.|+.+.|  |+||+|+||+++|++....
T Consensus       138 ---~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~~  188 (225)
T PRK08177        138 ---LPDGGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGDN  188 (225)
T ss_pred             ---cCCCCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCCC
Confidence               01234567899999999999999999999888  9999999999999997643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=2.5e-27  Score=202.35  Aligned_cols=191  Identities=32%  Similarity=0.387  Sum_probs=166.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|.+++++||||+|+||.+++++|+++|++|++++|+....+...+++.+.  +.++.++.+|++|++++..+++.+...
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            566799999999999999999999999999999999988777666666543  457889999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++||++|....  ..+.+.+++.+.++.|+.+++.+++++.+++.+.     +.++||++||..+..        
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~~ss~~~~~--------  146 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-----RYGRIVNISSVSGVT--------  146 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhcc--------
Confidence            8999999999996533  4567888999999999999999999999999774     357999999976554        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+.+|++++.++++++.++.+.|  +++++|+||.+.+++...
T Consensus       147 -------~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~  194 (246)
T PRK05653        147 -------GNPGQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEG  194 (246)
T ss_pred             -------CCCCCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhh
Confidence                   456678899999999999999999998888  999999999999998753

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.6e-28  Score=200.09  Aligned_cols=160  Identities=18%  Similarity=0.219  Sum_probs=141.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||++|||++++++|+++ ++|++++|+..                   .+++|+++++++++++++    .+++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998742                   367999999999998875    36899


Q ss_pred             EEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       113 ~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      ++|||||...  +..+.+.++|.+.+++|+.+++.+++++.|++.+       .++|+++||..+..             
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~-------------  117 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDE-------------  117 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCC-------------
Confidence            9999999643  3556788999999999999999999999999964       47899999977654             


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                        +.++...|+++|+++++|+++++.|+ +.|  |+||+|+||+++|++..
T Consensus       118 --~~~~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~  163 (199)
T PRK07578        118 --PIPGGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEK  163 (199)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhh
Confidence              56788899999999999999999999 778  99999999999999743

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.3e-27  Score=202.30  Aligned_cols=182  Identities=30%  Similarity=0.416  Sum_probs=157.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +.+++++++||||+|+||+++|++|+++|+ +|++++|+.+...+        . +.++.++.+|++|.++++++++.+ 
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~-~~~~~~~~~D~~~~~~~~~~~~~~-   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------L-GPRVVPLQLDVTDPASVAAAAEAA-   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------c-CCceEEEEecCCCHHHHHHHHHhc-
Confidence            457889999999999999999999999999 99999998765433        1 457889999999999998887753 


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                         +++|+|||+||..   ....+.+.+++.+.+++|+.+++.+++++.+.+.+.     +.++++++||..+..     
T Consensus        72 ---~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~-----  138 (238)
T PRK08264         72 ---SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-----GGGAIVNVLSVLSWV-----  138 (238)
T ss_pred             ---CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcc-----
Confidence               5799999999973   235567889999999999999999999999999874     467999999977654     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|++++++++.++.++.+.|  +++++++||.++|++....
T Consensus       139 ----------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~~  187 (238)
T PRK08264        139 ----------NFPNLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAGL  187 (238)
T ss_pred             ----------CCCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCcccccccccC
Confidence                      567788999999999999999999998888  9999999999999986543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.3e-27  Score=220.72  Aligned_cols=189  Identities=32%  Similarity=0.379  Sum_probs=160.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++++||||++|||.++|++|++.|++|+++++....  +..+++.+..   ...++.+|+++.++++.+++.+...
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV---GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999885321  2222333322   2457889999999999999999998


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||+..  ...+.+.++|+..+++|+.+++.+++++.+.+..+     ++++||++||.++..        
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~g~iv~~SS~~~~~--------  348 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-----DGGRIVGVSSISGIA--------  348 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcC--------
Confidence            999999999999753  35577899999999999999999999999965443     368999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++++|+++++.|+...|  |++|+|+||.++|++....
T Consensus       349 -------g~~~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        349 -------GNRGQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             -------CCCCChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhcc
Confidence                   467788999999999999999999999988  9999999999999987654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.9e-27  Score=200.78  Aligned_cols=188  Identities=20%  Similarity=0.182  Sum_probs=159.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++++||||++|||.++++.|++.|++|++++|+.+..+...+++...   .++.++.+|++++++++++++++...
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            578899999999999999999999999999999999987766655555432   25888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++.+|.+|+++|........+.++++..+++|+.+++.+++.++|++.+       ++++|++||..+...         
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~---------  142 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYK---------  142 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhccc---------
Confidence            8899999999996533222344888999999999999999999999864       478999999765321         


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                           +.+....|+++|++++.+++.++.++...|  +++++|+||+++|++..
T Consensus       143 -----~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~~  189 (238)
T PRK05786        143 -----ASPDQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFEP  189 (238)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCCc
Confidence                 345677899999999999999999998888  99999999999998753

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=8.7e-28  Score=204.60  Aligned_cols=208  Identities=20%  Similarity=0.277  Sum_probs=155.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++||||++|||+++|++|++.|  ..|++..|+...  .        ....++.++++|+++.++++++.+    .++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~~----~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLSE----QFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHHH----hcC
Confidence            479999999999999999999985  566666665432  1        113468899999999998888544    457


Q ss_pred             CccEEEEcCCCCC--------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          110 QLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       110 ~id~vi~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      ++|++|||||...        ...+.+.+.+++.+++|+.+++.+++.++|+|+++     +.++++++||..+...   
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~~~i~~iss~~~~~~---  138 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-----ESAKFAVISAKVGSIS---  138 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-----CCceEEEEeecccccc---
Confidence            8999999999753        13456778899999999999999999999999864     3578999998554321   


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhh
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAG  261 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~  261 (282)
                               ..+.+++..|+++|+++++|+++|+.|+.+...+++||+|+||.++|++.+.....  .+......|+.++
T Consensus       139 ---------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~a  207 (235)
T PRK09009        139 ---------DNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQN--VPKGKLFTPEYVA  207 (235)
T ss_pred             ---------cCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhc--cccCCCCCHHHHH
Confidence                     11345678999999999999999999998742339999999999999997643211  1111113556666


Q ss_pred             hhcccChHHHH
Q 023438          262 KCLLKNVQQVI  272 (282)
Q Consensus       262 ~~~~~~~~~~~  272 (282)
                      +.+.....+..
T Consensus       208 ~~~~~l~~~~~  218 (235)
T PRK09009        208 QCLLGIIANAT  218 (235)
T ss_pred             HHHHHHHHcCC
Confidence            66655554443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=4.7e-27  Score=202.04  Aligned_cols=187  Identities=29%  Similarity=0.330  Sum_probs=162.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|++|.++++.+++.+...+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999987777666655433  346889999999999999999999888889


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||....  ..+.+.+++++++++|+.+++.+++++++++++.     +.+++|++||..+..           
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~~v~~ss~~~~~-----------  142 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-----GWGRIINIASAHGLV-----------  142 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcC-----------
Confidence            9999999997532  4466788899999999999999999999999875     457999999976554           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                          +.+....|+.+|++++++++.++.++...+  ++++.|+||.++||+..
T Consensus       143 ----~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~  189 (255)
T TIGR01963       143 ----ASPFKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVE  189 (255)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHH
Confidence                456778999999999999999999998878  99999999999998753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=204.28  Aligned_cols=180  Identities=27%  Similarity=0.358  Sum_probs=152.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH-HHhcC--
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE-YNIQH--  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~-i~~~~--  108 (282)
                      ++++||||+||||.++|++|+++|++|++++|+....  .    .+. .+.++.++++|+++.+++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            4799999999999999999999999999999986531  1    111 145788999999999999997776 44433  


Q ss_pred             -CCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 -HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 -g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                       +++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+.+.+.++     ..++||++||..+..       
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  142 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-----AERRILHISSGAARN-------  142 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-----CCCEEEEEeChhhcC-------
Confidence             47999999999753   34567889999999999999999999999999874     468999999977654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.+++..|+++|++++++++.++.+ ...|  |++++|+||+++|++..
T Consensus       143 --------~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        143 --------AYAGWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHH
Confidence                    5678889999999999999999999 6677  99999999999999854

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=8.5e-27  Score=199.64  Aligned_cols=189  Identities=22%  Similarity=0.284  Sum_probs=157.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++|||||+|+||++++++|+++|++|++++|+. +..+...+.+.+.. +..+.++.+|+++.+++..+++.+...
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999864 33444444444332 335888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++++..+++|+.+++.+++++.+++.++      ++.+++++|..+..        
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~--------  148 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAER--------  148 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcC--------
Confidence            999999999999643  24456778899999999999999999999998763      56888877744322        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|++++.+++.++.++.+ +  +++++|+||+++||....
T Consensus       149 -------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        149 -------PLKGYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCccccc
Confidence                   5677889999999999999999999865 5  999999999999998653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.8e-27  Score=203.14  Aligned_cols=190  Identities=32%  Similarity=0.387  Sum_probs=162.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++++++||||+|+||.+++++|+++|++|++++|+.+..++..++..    ..++.++.+|++|++++..+++++..
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999999776655444432    22578899999999999999999988


Q ss_pred             cCCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-CeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~-g~iv~vsS~~~~~~~~~~  182 (282)
                      .++++|+|||+||....   ....+.+++.+.+++|+.+++.+++.+++.+...     +. ++|+++||..+..     
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~~vv~~ss~~~~~-----  152 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-----GHGGVIIALSSVAGRL-----  152 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCeEEEEeccccccc-----
Confidence            88999999999997522   4467888999999999999999999999988764     23 6788888866554     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.++...|+.+|++++.+++.++.++...+  +++++|+||+++|++.+.
T Consensus       153 ----------~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~  200 (264)
T PRK12829        153 ----------GYPGRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRR  200 (264)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHH
Confidence                      466778899999999999999999998777  999999999999998653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-27  Score=203.32  Aligned_cols=181  Identities=28%  Similarity=0.331  Sum_probs=154.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++++|||||+||||.+++++|++.|++|++++|+.....+..+.....  +.++.++.+|++|++++..+++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999987766655544333  3468889999999998877654      37


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||...  +..+.+.++++..+++|+.+++.+++.+++.+.+.     +.++||++||..+..           
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~-----------  137 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-----GKGKVVFTSSMAGLI-----------  137 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEcChhhcc-----------
Confidence            999999999753  35677889999999999999999999999999875     457999999977654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                          +.++...|+++|++++++++.++.++.+.|  |++++|+||++.|++..
T Consensus       138 ----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        138 ----TGPFTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFND  184 (257)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchh
Confidence                356678999999999999999999998888  99999999999998754

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=204.93  Aligned_cols=188  Identities=26%  Similarity=0.258  Sum_probs=152.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++++++||||+||||++++++|++.|++|++++|+.. ..+...+++...  +.++.++.+|+++++++.++++++...
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999753 444445555443  446888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++.+|++|||||....    ...++...+++|+.+++.+++++.+++.+       .+++|++||..+...         
T Consensus        82 ~~~~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~---------  141 (248)
T PRK07806         82 FGGLDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFI---------  141 (248)
T ss_pred             CCCCcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcC---------
Confidence            8899999999986422    11234567899999999999999998853       469999999544210         


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                       ....+.+.+..|+++|++++.+++.++.|++..|  |+||+|.||.+.|++..
T Consensus       142 -~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        142 -PTVKTMPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             -ccccCCccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhh
Confidence             0011334577899999999999999999999988  99999999999998754

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.5e-26  Score=197.77  Aligned_cols=191  Identities=30%  Similarity=0.404  Sum_probs=161.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++|||||+|+||.+++++|++.|++|+++.|+... .+...+.+.+.  +.++.++.+|+++++++.++++++...
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999998876665443 33344444333  446889999999999999999999888


Q ss_pred             CCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++||+||....  ..+.+.+++.+.+++|+.+++.+++.+.+++.+.     +.+++|++||..+..        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~i~~SS~~~~~--------  148 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-----RGGRIVNISSVAGLP--------  148 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECccccCC--------
Confidence            8899999999996533  4466888999999999999999999999999875     457999999977654        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+.+|++++++++.++.++...|  ++++.|+||.++|++....
T Consensus       149 -------~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~  197 (249)
T PRK12825        149 -------GWPGRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEAT  197 (249)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccc
Confidence                   456778899999999999999999998888  9999999999999987653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.4e-26  Score=225.19  Aligned_cols=191  Identities=29%  Similarity=0.359  Sum_probs=168.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++||+++||||+||||+++++.|++.|++|++++|+.+.++...+++...   .++.++.+|++++++++++++++...
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999988877766665432   36889999999999999999999988


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  +..+.+.++|+..+++|+.+++.+++++.+.++++.    .+++||++||..+..        
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~----~~g~iV~vsS~~~~~--------  563 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG----LGGSIVFIASKNAVN--------  563 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCcEEEEECCccccC--------
Confidence            999999999999753  356778999999999999999999999999998751    247999999977665        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc--ccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI--ATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v--~t~~~~~  242 (282)
                             +.++...|+++|++++++++.++.++.+.|  |+||.|+||.+  .|+++..
T Consensus       564 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~  613 (681)
T PRK08324        564 -------PGPNFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTG  613 (681)
T ss_pred             -------CCCCcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccc
Confidence                   467788999999999999999999999988  99999999999  7876543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=195.98  Aligned_cols=173  Identities=21%  Similarity=0.212  Sum_probs=147.1

Q ss_pred             EEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEE
Q 023438           35 IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL  114 (282)
Q Consensus        35 lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~v  114 (282)
                      +||||++|||++++++|++.|++|++++|+.+.++...+++.+   +.++.++.+|++++++++++++.+    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999999999998777666655532   346888999999999999988763    689999


Q ss_pred             EEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          115 INNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       115 i~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      |||+|...  +..+.+.+++++.+++|+.+++.+++  .+.+.       +.++||++||.++..               
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~-------~~g~iv~~ss~~~~~---------------  129 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA-------PGGSLTFVSGFAAVR---------------  129 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc-------CCeEEEEECchhhcC---------------
Confidence            99999753  34567889999999999999999999  33432       357999999987765               


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.++...|+++|+++++++++++.|+..    +||++|+||+++|++...
T Consensus       130 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        130 PSASGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHh
Confidence            4677889999999999999999999974    899999999999998653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=9e-26  Score=192.14  Aligned_cols=185  Identities=33%  Similarity=0.435  Sum_probs=158.6

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||++++||.+++++|++.|++|++++|+. +..+...+.+.+.  +.++.++.+|++|+++++++++.+.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 4444444555433  44688999999999999999999988889999


Q ss_pred             EEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          113 ILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       113 ~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|||++|....  ..+.+.+++++.+++|+.+++.+++.+.+++.+.     +.++++++||.++..             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~-------------  140 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-----RSGRIINISSVVGLM-------------  140 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEECCccccC-------------
Confidence            99999997532  3466788999999999999999999999998764     457999999977665             


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                        +.++...|+++|++++.+++.++.++...|  +++++++||.++|++...
T Consensus       141 --g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       141 --GNAGQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhh
Confidence              466788999999999999999999998888  999999999999987654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=9.4e-26  Score=194.27  Aligned_cols=181  Identities=33%  Similarity=0.398  Sum_probs=156.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc-CCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~-~g~  110 (282)
                      |+++||||+||||.+++++|+++|++|++++|+.+.++..    .+    ..+.++.+|++|.+++..+++.+... .++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999997665433    21    13678899999999999999988764 368


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|.+|||+|...  +..+.+.+++++.+++|+.+++.+++++++.+.+.     +.+++|++||..+..           
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~-----------  138 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSVMGLI-----------  138 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCccccc-----------
Confidence            999999999643  35567889999999999999999999999999875     457999999976654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.++...|+++|++++.++++++.++...+  +++++|+||.+.|++.+.
T Consensus       139 ----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~  186 (256)
T PRK08017        139 ----STPGRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDN  186 (256)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhc
Confidence                467788999999999999999999999888  999999999999997654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=192.53  Aligned_cols=201  Identities=17%  Similarity=0.134  Sum_probs=143.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.....+   .. ..  . ...++.+|+++.+++++       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHHHHHH-------
Confidence            45788999999999999999999999999999999998632111   11 11  1 23578899999987654       


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      .++++|++|||||... ..+.+.+++++.+++|+.+++.++++++|+|.++..  .+++.+++.+|.++..         
T Consensus        76 ~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~g~~iiv~ss~a~~~---------  143 (245)
T PRK12367         76 QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNNS--QIPKEIWVNTSEAEIQ---------  143 (245)
T ss_pred             hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--CCCeEEEEEecccccC---------
Confidence            3468999999999743 234678999999999999999999999999976310  0123344445544332         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHH---HHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhh
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHA---NELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKC  263 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~---~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~  263 (282)
                             .+..+.|++||+|+..+.   +.++.|+.+.|  ++|+++.||+++|++....          ...|+.+++.
T Consensus       144 -------~~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~~~~----------~~~~~~vA~~  204 (245)
T PRK12367        144 -------PALSPSYEISKRLIGQLVSLKKNLLDKNERKK--LIIRKLILGPFRSELNPIG----------IMSADFVAKQ  204 (245)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHhhcccc--cEEEEecCCCcccccCccC----------CCCHHHHHHH
Confidence                   234567999999986543   34444556667  9999999999999974211          1245666666


Q ss_pred             cccChHHHH
Q 023438          264 LLKNVQQVI  272 (282)
Q Consensus       264 ~~~~~~~~~  272 (282)
                      ++....++.
T Consensus       205 i~~~~~~~~  213 (245)
T PRK12367        205 ILDQANLGL  213 (245)
T ss_pred             HHHHHhcCC
Confidence            555554443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.4e-25  Score=188.20  Aligned_cols=180  Identities=24%  Similarity=0.273  Sum_probs=146.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+++||.+++++|++.|++|++++|+.+..++    +...    .+.++.+|+++.++++++++.+..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQAL----GAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            689999999999999999999999999999998765443    2221    356789999999999998877642  479


Q ss_pred             cEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          112 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       112 d~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      |++|||+|...    ...+.+.++++..+++|+.+++.+++++++++.+      ..+++++++|..+..+..       
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~~-------  138 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA------AGGVLAVLSSRMGSIGDA-------  138 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc------cCCeEEEEcCcccccccc-------
Confidence            99999999752    2345688999999999999999999999999865      357899999976654311       


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                           +......|+++|++++++++.++.++.  +  ++||+|+||+++|++.++.
T Consensus       139 -----~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~~  185 (222)
T PRK06953        139 -----TGTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGAQ  185 (222)
T ss_pred             -----cCCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCCC
Confidence                 111223699999999999999998864  4  9999999999999997653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.93  E-value=5.1e-24  Score=173.86  Aligned_cols=196  Identities=17%  Similarity=0.177  Sum_probs=171.4

Q ss_pred             CCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..|+||++||+|-.  +.|+..||+.|.+.|+++++...++ ++++..+++.+...  ....++||+++.++++.+++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHH
Confidence            35899999999955  8999999999999999999999886 67777777776643  3577999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++++|++|.+||+.++..      ...|.+.+.+...+++..++...++|++.|.|..       +|++|.++=.++.. 
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r-  150 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSER-  150 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEecccee-
Confidence            999999999999999753      2457889999999999999999999999999975       78999999876665 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhh
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM  249 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~  249 (282)
                                    -.|.+...+.+|+++++-++-||.+++++|  ||||.|+-|++.|=-......+..+
T Consensus       151 --------------~vPnYNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~  205 (259)
T COG0623         151 --------------VVPNYNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKM  205 (259)
T ss_pred             --------------ecCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHH
Confidence                          478889999999999999999999999999  9999999999999877665444433

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=1.9e-25  Score=181.99  Aligned_cols=188  Identities=19%  Similarity=0.180  Sum_probs=153.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.+|+||+|+|||..++..+.+++-+.+..++++...+  .+.++-.+. ........|++...-+..+++..+.++++
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            478999999999999999999988876655554443333  233333332 33444556888888888899999999999


Q ss_pred             ccEEEEcCCCCCC-----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          111 LNILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       111 id~vi~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      .|++|||||..++     ....+.++|.+.|+.|+++.+.+.+.++|.+++++    ..+.+|++||.+...        
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p----~~~~vVnvSS~aav~--------  150 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP----VNGNVVNVSSLAAVR--------  150 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC----ccCeEEEecchhhhc--------
Confidence            9999999997654     23678899999999999999999999999999852    258999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             |+++++.|+.+|+|.+++.+.|+.|-- ++  ++|.++.||.+||+|....
T Consensus       151 -------p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~i  198 (253)
T KOG1204|consen  151 -------PFSSWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCI  198 (253)
T ss_pred             -------cccHHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHH
Confidence                   799999999999999999999999875 66  9999999999999997654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.4e-23  Score=175.95  Aligned_cols=176  Identities=25%  Similarity=0.376  Sum_probs=147.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .|+++||||+|+||.+++++|+++ ++|++++|+.+..++..++    .  ..+.++.+|++|+++++++++.+    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE----L--PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH----h--ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            479999999999999999999999 9999999997654443322    1  24778999999999998888754    47


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++||++|....  ..+.+.+++.+.+++|+.+++.+++.+++.+++.      .+++|++||..+..           
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~-----------  134 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLR-----------  134 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcC-----------
Confidence            9999999997532  4567889999999999999999999999999873      57999999977654           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                          +.++...|+.+|++++++++.++.++...   +++++|+||.++|++..
T Consensus       135 ----~~~~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~  180 (227)
T PRK08219        135 ----ANPGWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQR  180 (227)
T ss_pred             ----cCCCCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhh
Confidence                45667899999999999999999887643   89999999999988654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=8e-24  Score=224.65  Aligned_cols=181  Identities=19%  Similarity=0.127  Sum_probs=151.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChh------------------------------------------
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIA------------------------------------------   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~------------------------------------------   66 (282)
                      +|+++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999988 699999999820                                          


Q ss_pred             -----hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHH
Q 023438           67 -----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATN  139 (282)
Q Consensus        67 -----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n  139 (282)
                           ......+++.+.  +.++.++.||++|.++++++++++... +++|+||||||+..  ...+.+.++|++++++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 111122223222  557899999999999999999999877 68999999999753  36688999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       140 ~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      +.|.+.+++++.+.+         .++||++||..+..               +.+++..|+++|++++++++.++.++.
T Consensus      2153 v~G~~~Ll~al~~~~---------~~~IV~~SSvag~~---------------G~~gqs~YaaAkaaL~~la~~la~~~~ 2208 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN---------IKLLALFSSAAGFY---------------GNTGQSDYAMSNDILNKAALQLKALNP 2208 (2582)
T ss_pred             HHHHHHHHHHHHHhC---------CCeEEEEechhhcC---------------CCCCcHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999888876543         34799999988876               578899999999999999999999874


Q ss_pred             cCCCcEEEEEeeCCccccCccc
Q 023438          220 EDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       220 ~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .    ++|++|+||+++|+|..
T Consensus      2209 ~----irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2209 S----AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             C----cEEEEEECCeecCCccc
Confidence            3    89999999999999865

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=3.1e-23  Score=188.62  Aligned_cols=201  Identities=20%  Similarity=0.156  Sum_probs=145.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.++||+++||||+||||++++++|++.|++|++++|+.+.+.+..   .+.  ...+..+.+|++|.+++.+.+     
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHHh-----
Confidence            4578999999999999999999999999999999999876543322   111  234678899999988776543     


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        +++|++|||||.... .+.+.+++++++++|+.+++.++++++|.|+++... ..++.++++|+ ++.          
T Consensus       244 --~~IDiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~-~~~~iiVn~Ss-a~~----------  308 (406)
T PRK07424        244 --EKVDILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK-ATKEVWVNTSE-AEV----------  308 (406)
T ss_pred             --CCCCEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCeEEEEEcc-ccc----------
Confidence              479999999997532 367888999999999999999999999999874210 01234566654 222          


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLK  266 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  266 (282)
                            +.+..+.|++||+|+.+++. ++.+.  .+  +.|..+.||+++|++....          ...|+.+++.++.
T Consensus       309 ------~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~~~~----------~~spe~vA~~il~  367 (406)
T PRK07424        309 ------NPAFSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLNPIG----------VMSADWVAKQILK  367 (406)
T ss_pred             ------cCCCchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCCcCC----------CCCHHHHHHHHHH
Confidence                  12345679999999999974 44442  34  5556688999999874211          1255666666666


Q ss_pred             ChHHHHh
Q 023438          267 NVQQVIL  273 (282)
Q Consensus       267 ~~~~~~~  273 (282)
                      ..+++.+
T Consensus       368 ~i~~~~~  374 (406)
T PRK07424        368 LAKRDFR  374 (406)
T ss_pred             HHHCCCC
Confidence            5555443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=4.7e-23  Score=176.41  Aligned_cols=165  Identities=29%  Similarity=0.299  Sum_probs=129.9

Q ss_pred             HHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCCCCCc
Q 023438           47 TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM  126 (282)
Q Consensus        47 ia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~  126 (282)
                      +|++|+++|++|++++|+.+..+     .        ..++++|++|.++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            57899999999999999876531     1        2357899999999999998874   68999999999642    


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC-c--------cccC---CCCCCCC
Q 023438          127 LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-I--------RFDK---INDPSGY  194 (282)
Q Consensus       127 ~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~--------~~~~---~~~~~~~  194 (282)
                        .++++..+++|+.+++.+++.++|+|.+       .++||++||.+++..+... .        ..+.   .....+.
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV  131 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence              2457889999999999999999999864       4799999998775311000 0        0000   0001356


Q ss_pred             CCCccchHhHHHHHHHHHHHH-HHhccCCCcEEEEEeeCCccccCcccc
Q 023438          195 NGFRAYSQSKLANILHANELA-RRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       195 ~~~~~y~asK~a~~~~~~~la-~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ++...|++||+|++++++.++ .|+++.|  |+||+|+||.++|++.+.
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        132 ALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCccccc
Confidence            677899999999999999999 9999888  999999999999999764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=1.9e-22  Score=166.56  Aligned_cols=200  Identities=26%  Similarity=0.356  Sum_probs=168.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-----EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-----HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-----~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .|+++|||+++|||.+|+++|.+...     ++++.+|+-++.++..+.+++-+|  ..++.++.+|++|..++.++.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            48999999999999999999998754     578889999999999999999998  46789999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCCCC--C---------------------------cCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 023438          104 YNIQHHQLNILINNAGIMGTP--F---------------------------MLSKDNIELQFATNHLGHFLLTNLLLDTM  154 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~--~---------------------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l  154 (282)
                      |+++|.++|+++.|||.....  .                           ..+.+++...|+.|+.|+|++.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            999999999999999964221  0                           14678889999999999999999999999


Q ss_pred             HhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc
Q 023438          155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA  234 (282)
Q Consensus       155 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~  234 (282)
                      -.+     ....+|.+||..+.-   +.++++++.   -..+-.+|+.||.+..-+.-++-+.+.+.|  +.-++++||.
T Consensus       163 ~~~-----~~~~lvwtSS~~a~k---k~lsleD~q---~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~pg~  229 (341)
T KOG1478|consen  163 CHS-----DNPQLVWTSSRMARK---KNLSLEDFQ---HSKGKEPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQPGI  229 (341)
T ss_pred             hcC-----CCCeEEEEeeccccc---ccCCHHHHh---hhcCCCCcchhHHHHHHHHHHHhccccccc--hhhhcccCce
Confidence            875     345999999976543   233333332   345567899999999988888888999888  8888999999


Q ss_pred             cccCccccC
Q 023438          235 IATNIIRHN  243 (282)
Q Consensus       235 v~t~~~~~~  243 (282)
                      .-|.+....
T Consensus       230 ~tt~~~~~~  238 (341)
T KOG1478|consen  230 FTTNSFSEY  238 (341)
T ss_pred             eecchhhhh
Confidence            999887754

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=1.6e-21  Score=157.60  Aligned_cols=173  Identities=24%  Similarity=0.236  Sum_probs=139.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHH---HHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV---KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~---~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++||||++|||.+++++|++.|+ .|++++|+....+..   .+++.+.  +.++.++.+|++++++++++++.+...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 688888876544332   2344333  457888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++||++|...  +..+.+.++++..+++|+.+++.+++++.+.         +.++++++||..+..        
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~ii~~ss~~~~~--------  141 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL---------PLDFFVLFSSVAGVL--------  141 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC---------CcceEEEEccHHHhc--------
Confidence            899999999999753  3456788999999999999999999988321         357899999977665        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  236 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  236 (282)
                             +.++...|+++|++++.+++.++    ..|  +++.++.||++.
T Consensus       142 -------~~~~~~~y~~sk~~~~~~~~~~~----~~~--~~~~~~~~g~~~  179 (180)
T smart00822      142 -------GNPGQANYAAANAFLDALAAHRR----ARG--LPATSINWGAWA  179 (180)
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHH----hcC--CceEEEeecccc
Confidence                   45678899999999888776554    456  678889999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=3.5e-21  Score=171.93  Aligned_cols=169  Identities=16%  Similarity=0.160  Sum_probs=133.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++||++|||||+|+||.+++++|++.|  ++|++++|+........+.    ....++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~----~~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK----FPAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH----hCCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999987  6899999886543332222    223468889999999998888765    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+||.....  ....+..+.+++|+.+++++++++.+.         +.++||++||...           
T Consensus        74 ---~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~---------~~~~iV~~SS~~~-----------  128 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN---------GVKRVVALSTDKA-----------  128 (324)
T ss_pred             ---cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeCCCC-----------
Confidence               479999999964321  122334568999999999999988753         2458999999532           


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                             ..+...|+++|++.+.+++.++.++...|  +++++++||.+.+|-
T Consensus       129 -------~~p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~  172 (324)
T TIGR03589       129 -------ANPINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSR  172 (324)
T ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCC
Confidence                   22346799999999999999988888888  999999999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.88  E-value=5.8e-21  Score=172.16  Aligned_cols=189  Identities=20%  Similarity=0.138  Sum_probs=143.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++||++|||||+|+||.+++++|++.|++|++++|+........+.+..   ..++.++.+|+++.+++.++++..    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            5789999999999999999999999999999999987654433332221   235778899999999999988864    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+|||+|+...  ...+.+++...+++|+.+++.+++++...        +..+++|++||...+.....   ..++
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~--------~~~~~iv~~SS~~vyg~~~~---~~~~  140 (349)
T TIGR02622        75 -KPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI--------GSVKAVVNVTSDKCYRNDEW---VWGY  140 (349)
T ss_pred             -CCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc--------CCCCEEEEEechhhhCCCCC---CCCC
Confidence             6899999999532  23455677788999999999999887432        11358999999655421100   0123


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCccccCcc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKE----DGVDITANSVHPGAIATNII  240 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~----~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .++.+..+...|+.+|.+.+.+++.++.++..    .|  +++++++|+.+.+|..
T Consensus       141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~--i~~~~lR~~~vyGp~~  194 (349)
T TIGR02622       141 RETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG--IKIASARAGNVIGGGD  194 (349)
T ss_pred             ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCC--CcEEEEccCcccCCCc
Confidence            34445566788999999999999999988754    36  8999999999999853

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=5.2e-20  Score=164.26  Aligned_cols=191  Identities=19%  Similarity=0.149  Sum_probs=138.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++|++|||||+|+||++++++|++.|++|++++|+..........+.......++.++.+|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999998876544432211111112368889999999998888775       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc-cccCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-RFDKI  188 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~~~  188 (282)
                      ++|+||||||....  ..+.+++...+++|+.+++.+++++.+.+        +.++||++||.+++.+..... +..++
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~--------~~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVS--------SVKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcC--------CceEEEEecchhheecCCccCCCCCcc
Confidence            57999999996432  33455678889999999999999987653        135899999987654321100 11123


Q ss_pred             CCCCCCC------CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYN------GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~------~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++.+..      ....|+.+|.+.+.+++.++.++   |  +.+..++|+.+.+|....
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~  201 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQP  201 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCC
Confidence            3333322      23579999999988888876654   5  778889999999997553

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.85  E-value=9.8e-20  Score=162.10  Aligned_cols=188  Identities=14%  Similarity=0.055  Sum_probs=138.7

Q ss_pred             CCCCEEEEecCCChhHHH--HHHHHHHcCCEEEEEEcChhhHH-----------HHHHHHHHhCCCCceeEEEccCCCHH
Q 023438           29 GSGLTAIVTGATSGIGTE--TARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~a--ia~~l~~~G~~Vii~~r~~~~~~-----------~~~~~l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      -.+|++||||+++|||.+  ||+.| +.|++|+++++..+...           +..++..+.. +..+..+.||+++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHH
Confidence            357999999999999999  89999 99999988885432211           1122222222 445778999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCCCCCC-----------------------c-------------CChhhHHHHHHHH
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIMGTPF-----------------------M-------------LSKDNIELQFATN  139 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~~~~~-----------------------~-------------~~~~~~~~~~~~n  139 (282)
                      +++++++.+.+.+|++|+||||+|......                       +             .+.++++.  +++
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~--Tv~  194 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD--TVK  194 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH--HHH
Confidence            999999999999999999999999752211                       0             22233332  344


Q ss_pred             HHHH---HHH--HHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC--ccchHhHHHHHHHHH
Q 023438          140 HLGH---FLL--TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHAN  212 (282)
Q Consensus       140 ~~~~---~~~--~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~asK~a~~~~~~  212 (282)
                      ++|.   ...  ++...+.|.       .++++|.+|..+...               .+|.+  ...+.+|+++++-++
T Consensus       195 vMggedw~~Wi~al~~a~lla-------~g~~~va~TY~G~~~---------------t~p~Y~~g~mG~AKa~LE~~~r  252 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLA-------EGAKTVAYSYIGPEL---------------THPIYWDGTIGKAKKDLDRTAL  252 (398)
T ss_pred             hhccchHHHHHHHHHhccccc-------CCcEEEEEecCCcce---------------eecccCCchHHHHHHHHHHHHH
Confidence            5554   222  333444443       368999999966554               35555  478999999999999


Q ss_pred             HHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          213 ELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       213 ~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      .|+.++++.|  +|+|++.+|.+.|.-....+
T Consensus       253 ~La~~L~~~g--iran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        253 ALNEKLAAKG--GDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             HHHHHhhhcC--CEEEEEecCcccchhhhcCC
Confidence            9999999998  99999999999998876653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=2.3e-20  Score=152.99  Aligned_cols=172  Identities=23%  Similarity=0.250  Sum_probs=131.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh---hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++|||||.||||..+++.|++.|. +|++++|+.   ....+..+++.+.  +.++.+++||++|++++.++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            689999999999999999999987 899999993   2345667777665  6789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      ++++.|||+||...  ...+.+.++++..+...+.+...+.+.+.+.         +-..+|++||.++..         
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~---------~l~~~i~~SSis~~~---------  141 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR---------PLDFFILFSSISSLL---------  141 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT---------TTSEEEEEEEHHHHT---------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC---------CCCeEEEECChhHhc---------
Confidence            99999999999763  3667899999999999999999988877652         245899999988877         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  236 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  236 (282)
                            |.++...|+++.+.++.|++....    .|  ..+.+|+.|..+
T Consensus       142 ------G~~gq~~YaaAN~~lda~a~~~~~----~g--~~~~sI~wg~W~  179 (181)
T PF08659_consen  142 ------GGPGQSAYAAANAFLDALARQRRS----RG--LPAVSINWGAWD  179 (181)
T ss_dssp             ------T-TTBHHHHHHHHHHHHHHHHHHH----TT--SEEEEEEE-EBS
T ss_pred             ------cCcchHhHHHHHHHHHHHHHHHHh----CC--CCEEEEEccccC
Confidence                  588999999999988777765443    45  456778877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.83  E-value=6e-19  Score=164.71  Aligned_cols=175  Identities=19%  Similarity=0.215  Sum_probs=133.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-------CCCceeEEEccCCCHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-------PSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-------~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      .+||++|||||+||||++++++|++.|++|++++|+.+.++...+++.+..       ...++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            367999999999999999999999999999999999888777666553310       1135889999999988876543


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                             +++|+||||+|....    ...++...+++|+.+..++++++...         +.++||++||.++...   
T Consensus       158 -------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------gVgRIV~VSSiga~~~---  214 (576)
T PLN03209        158 -------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA---------KVNHFILVTSLGTNKV---  214 (576)
T ss_pred             -------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh---------CCCEEEEEccchhccc---
Confidence                   478999999996432    12246677899999988888887543         3469999999765321   


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                 +.+.. .|. +|.++..+.+.+..++...|  |+++.|+||+++|++..
T Consensus       215 -----------g~p~~-~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        215 -----------GFPAA-ILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDA  259 (576)
T ss_pred             -----------Ccccc-chh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccc
Confidence                       11111 233 77787778888888888888  89999999999988644

>PRK06720 hypothetical protein; Provisional

Probab=99.83  E-value=5.2e-19  Score=143.00  Aligned_cols=145  Identities=19%  Similarity=0.207  Sum_probs=117.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+.+++|+++||||++|||.+++++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|+++.++++++++++.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~   88 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITL   88 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999988777776776533  3457788999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCeEEEEcCCcc
Q 023438          106 IQHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK--SGGEGRIINVSSEGH  175 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~--~~~~g~iv~vsS~~~  175 (282)
                      +.+|++|++|||||....   ..+.+.++ ++  .+|+.+.++.++.+.+++.++.+.  ....|++-.+|+.+.
T Consensus        89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         89 NAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            899999999999997532   23333333 33  677888899999999998876443  245789999998554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=1.1e-18  Score=155.64  Aligned_cols=191  Identities=23%  Similarity=0.213  Sum_probs=132.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+|++++||||+|+||++++++|++.|++|+++.|+....+...+.........++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            56899999999999999999999999999999999876544332221111112368889999999998888776      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc-cC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-DK  187 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~~  187 (282)
                       .+|+|||+|+.....   ..+...+.+++|+.++..+++++....        +-.+||++||.+++......... ..
T Consensus        77 -~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP--------SVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             -CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC--------CccEEEEecchhheecCCccCCCCCC
Confidence             479999999964221   112234678999999999988765321        12489999997654211100000 11


Q ss_pred             CCCCCCC------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGY------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.++...      .....|+.+|.+.+.+++.+..++   |  +++.+++|+.+.+|....
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~  200 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQP  200 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCC
Confidence            2222111      124679999999888877776654   5  888899999999997553

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.82  E-value=2e-18  Score=160.13  Aligned_cols=196  Identities=12%  Similarity=0.085  Sum_probs=135.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH----------------HHHHHHHHHhCCCCceeEEEcc
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG----------------KDVKETIVKEIPSAKVDAMELD   90 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~----------------~~~~~~l~~~~~~~~v~~~~~D   90 (282)
                      -.++++++|||||+|+||++++++|++.|++|+++++.....                .+..+.+.+. .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECC
Confidence            446789999999999999999999999999999987532110                0111111111 12358899999


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438           91 LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus        91 vs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      ++|.+++.++++.+     ++|+|||+|+.... ..+.++++++..+++|+.+++++++++...-        ...++|+
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--------v~~~~V~  188 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--------PDCHLVK  188 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--------CCccEEE
Confidence            99999999988874     68999999975432 2334555667788999999999998876542        1248999


Q ss_pred             EcCCcccccccCCccccCCC------CC---CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          170 VSSEGHRLAYHEGIRFDKIN------DP---SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~------~~---~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +||...+.......+.+.+.      ++   .+..+...|+.+|.+.+.+++.++..+   |  +.+..++|+.+.+|..
T Consensus       189 ~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~~v~lR~~~vyGp~~  263 (442)
T PLN02572        189 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVRT  263 (442)
T ss_pred             EecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CCEEEEecccccCCCC
Confidence            99976543211101000110      11   133445689999999888887766553   5  7888899999999864


Q ss_pred             c
Q 023438          241 R  241 (282)
Q Consensus       241 ~  241 (282)
                      .
T Consensus       264 ~  264 (442)
T PLN02572        264 D  264 (442)
T ss_pred             c
Confidence            3

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=2.1e-18  Score=154.88  Aligned_cols=176  Identities=16%  Similarity=0.103  Sum_probs=128.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH-HHHHHHHH-h-CCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVK-E-IPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~-~~~~~l~~-~-~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +++++++|||||+|+||.+++++|++.|++|++++|+..... ...+.+.. . ..+.++.++.+|++|.+++..+++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            467899999999999999999999999999999998754311 11222211 0 01235889999999999999988875


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                           .+|+|||+|+....  ....++....+++|+.++..+++++.+...+.    +.-.++|++||...+ +...   
T Consensus        83 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~----~~~~~~v~~Ss~~vy-g~~~---  147 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV--AVSFEMPDYTADVVATGALRLLEAVRLHGQET----GRQIKYYQAGSSEMY-GSTP---  147 (340)
T ss_pred             -----CCCEEEECCcccch--hhhhhChhHHHHHHHHHHHHHHHHHHHhcccc----ccceeEEEeccHHHh-CCCC---
Confidence                 58999999997432  12334556778999999999999988875431    011278888886443 2211   


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                       .++.++.+..+...|+.||.+.+.+++.++.++.
T Consensus       148 -~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  181 (340)
T PLN02653        148 -PPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG  181 (340)
T ss_pred             -CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC
Confidence             1345555666678899999999999999988764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.81  E-value=3.3e-18  Score=154.33  Aligned_cols=188  Identities=22%  Similarity=0.098  Sum_probs=132.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +.+++|||||+|+||.+++++|++.|++|++++|+..................++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            5689999999999999999999999999999999866544432221111001257889999999988887765       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      .+|+|||+|+.... .  ..+.....+++|+.+++.+++++.+...        ..+||++||...+.......+.  ..
T Consensus        77 ~~d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~--~~  143 (351)
T PLN02650         77 GCTGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPV--YD  143 (351)
T ss_pred             CCCEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCc--cC
Confidence            47999999985421 1  1223356789999999999998876521        2489999997554321111110  11


Q ss_pred             CC---------CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          190 DP---------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       190 ~~---------~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.         .+......|+.||.+.+.+++.++.++   |  ++++.++|+.+.+|....
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~~  200 (351)
T PLN02650        144 EDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFIST  200 (351)
T ss_pred             cccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCCC
Confidence            11         011123479999999998888887663   5  888999999999997543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.80  E-value=3.3e-18  Score=153.83  Aligned_cols=183  Identities=18%  Similarity=0.146  Sum_probs=132.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH-HHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV-KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~-~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++++++||||+|+||++++++|+++|++|++++|+.+..... .+.+...  ..++.++.+|+++.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHh-----
Confidence            4678999999999999999999999999999999986543221 2222111  2357889999999998888776     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        .+|+|||+|+..       .+++.+.+++|+.++..+++++.+.         +-.+||++||.++.++.....+...
T Consensus        81 --~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~---------~v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 --GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA---------KVKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             --cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeccceeeeccCCCCCCcc
Confidence              479999999953       1245678999999999999887643         2348999999765543211111011


Q ss_pred             CCCCC------CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPS------GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~------~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +.++.      +......|+.+|.+.+.+++.++.++   |  +++..++|+.+..|...
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCC
Confidence            22221      22245679999999988888776654   5  77888999999999644

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.80  E-value=5.7e-18  Score=152.93  Aligned_cols=192  Identities=20%  Similarity=0.139  Sum_probs=134.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ...+++++|||||+|+||++++++|++.|++|++++|+..........+..   +.++.++.+|+++.+++.++++    
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~----   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK----   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc----
Confidence            445778999999999999999999999999999999986654444333321   3468889999999998887764    


Q ss_pred             cCCCccEEEEcCCCCCCCC---cCChhhH--HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          107 QHHQLNILINNAGIMGTPF---MLSKDNI--ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~---~~~~~~~--~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                         .+|+|||+|+......   ..+.+.+  ...++.|+.+++.+++++.+..        ..++||++||.+.+.....
T Consensus        79 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------~~~~~v~~SS~~vyg~~~~  147 (353)
T PLN02896         79 ---GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------TVKRVVFTSSISTLTAKDS  147 (353)
T ss_pred             ---CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------CccEEEEEechhhcccccc
Confidence               4799999999754321   1222222  3456777889888888876542        1358999999766542211


Q ss_pred             Cccc-cCCCCC--C-------CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRF-DKINDP--S-------GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~-~~~~~~--~-------~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .-.+ .++.++  .       +.+....|+.||.+.+.+++.++.++   |  +++.+++|+.+.+|...
T Consensus       148 ~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        148 NGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLT  212 (353)
T ss_pred             CCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcC
Confidence            1001 112222  1       11234579999999888888776654   4  88889999999999654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.80  E-value=4.2e-18  Score=150.28  Aligned_cols=186  Identities=13%  Similarity=0.012  Sum_probs=128.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh--HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++||||+|+||++++++|++.|++|++++|+...  .......+...  +.++.++.+|++|.+++..++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999986432  22222222111  2368889999999988876554     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc-cCCcccc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HEGIRFD  186 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~  186 (282)
                        ..|.++|.++....   . ..+++..+++|+.+++.+++++.+.+.        .++||++||.++.... .......
T Consensus        78 --~~d~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~~~~  143 (297)
T PLN02583         78 --GCSGLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNISTQK  143 (297)
T ss_pred             --CCCEEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCCCCC
Confidence              46888887763221   1 124578899999999999999877531        2589999998765311 1000111


Q ss_pred             CCCCCCCCC------CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYN------GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~------~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +++++.+.+      ....|+.||...+.++..++.+   .|  +++++|+|+.+.+|...
T Consensus       144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~g--i~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RG--VNMVSINAGLLMGPSLT  199 (297)
T ss_pred             CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hC--CcEEEEcCCcccCCCCC
Confidence            222222111      1126999999988877776554   35  88999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=7e-18  Score=151.71  Aligned_cols=171  Identities=16%  Similarity=0.079  Sum_probs=123.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH-HHHHHHHHHhC---CCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEI---PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~-~~~~~~l~~~~---~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |++|||||+|+||.+++++|++.|++|++++|+.... ....+.+.+..   .+..+.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999875421 11112221110   1235889999999999999988875   


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        ++|+|||+|+.....  ...+.....+++|+.++..+++++.+.-.+      +..++|++||...+. ...   ..+
T Consensus        78 --~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------~~~~~v~~SS~~vyg-~~~---~~~  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLI------KSVKFYQASTSELYG-KVQ---EIP  143 (343)
T ss_pred             --CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCC------cCeeEEEeccHHhhC-CCC---CCC
Confidence              689999999965431  122334567889999999999988765211      124799999965442 111   123


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      +.++.+..+...|+.||.+.+.+++.++.++.
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence            45555666778999999999999999888763

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.80  E-value=5.4e-18  Score=153.07  Aligned_cols=193  Identities=15%  Similarity=0.063  Sum_probs=133.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEE-EEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vi-i~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++|||||+|+||++++++|.+.|++++ +++|.... .. ...+....+..++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            6899999999999999999999998754 55554321 11 111111111336788899999999998888752     6


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+|||+||....  +.+.+++...+++|+.+++.+++++.+.+........+..++|++||.+.+. .... .-.++.+
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg-~~~~-~~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG-DLHS-TDDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC-CCCC-CCCCcCC
Confidence            8999999996432  2345667889999999999999999876432100001134899999865432 1100 0112445


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +.+..+...|+.||.+.+.+++.++.++.     +.+..++|+.+..|..
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYH  195 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCC
Confidence            55556678899999999999999877753     5566688998888764

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=1e-17  Score=150.92  Aligned_cols=187  Identities=16%  Similarity=0.104  Sum_probs=132.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC--CCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |.|++++++||||+|+||.+++++|++.|++|++++|.........+++....  .+.++.++.+|++|++++..+++..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            35778999999999999999999999999999999875433222222222211  1235788999999999998888753


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                           ++|+|||+|+....  ..+.+++...+++|+.++..+++++.    +.     +..++|++||...+ +..   .
T Consensus        81 -----~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-----~~~~~v~~Ss~~vy-g~~---~  140 (352)
T PLN02240         81 -----RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVMA----KH-----GCKKLVFSSSATVY-GQP---E  140 (352)
T ss_pred             -----CCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHHH----Hc-----CCCEEEEEccHHHh-CCC---C
Confidence                 78999999996432  12445677889999999998887553    22     23589999996433 211   1


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  237 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  237 (282)
                      ..++.++.+..+...|+.+|.+.+.+++.++.+.  .+  +.+..++++.+..
T Consensus       141 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~~~R~~~v~G  189 (352)
T PLN02240        141 EVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PE--WKIILLRYFNPVG  189 (352)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CCEEEEeecCcCC
Confidence            2235556666677899999999999988877552  23  5555677665544

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=8.4e-18  Score=150.88  Aligned_cols=189  Identities=18%  Similarity=0.077  Sum_probs=130.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++++++||||+|+||++++++|++.|++|++++|+......... +.......++.++.+|++|.+++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-----
Confidence            4567899999999999999999999999999988888654332211 1110001257889999999988887765     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        ++|+|||+|+....   ...+.....+++|+.++..+++++.+..        +.++||++||.+.+......-.-.+
T Consensus        80 --~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~--------~~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 --GCDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK--------SVKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             --cCCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeecceeeeccCCCCCCce
Confidence              57999999985321   1223345578999999999998876541        1358999999766542110000000


Q ss_pred             CCCC---------CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          188 INDP---------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       188 ~~~~---------~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +.+.         ...++...|+.||.+.+.+++.++.++   |  +.+..++|+.+.+|..
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSL  203 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCc
Confidence            1111         122345679999999888888876653   5  7888899999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=9.3e-18  Score=149.35  Aligned_cols=188  Identities=16%  Similarity=0.102  Sum_probs=128.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++++|||||+|+||++++++|+++|++|++++|+....... ..+.... ...++.++.+|+++++++..+++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            578999999999999999999999999999999886543322 2222110 02368889999999988887765      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc-ccccCCccccC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIRFDK  187 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~  187 (282)
                       ++|+|||+|+.....   ..+.....+++|+.++..+++++....        +-.+||++||.++. ++.....+..+
T Consensus        76 -~~d~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 -GCEGVFHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVP--------SVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             -CCCEEEEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCC--------CCCEEEEccCHHHhcCCCcCCCCCCc
Confidence             579999999964321   111224678999999999998876431        12489999997642 21110000011


Q ss_pred             CCCCCCCC------CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYN------GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~------~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +.++.+..      ....|+.+|.+.+.+++.+..+.   +  +++..++|+.+.+|...
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCC
Confidence            23322221      12479999999888777665543   5  77888999999999754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.3e-17  Score=152.94  Aligned_cols=179  Identities=18%  Similarity=0.153  Sum_probs=152.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++||+++||||+|.||+++++++++.+. ++++.+|++.+.....+++.+.++..++.++.+|+.|.+.++++++..   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            6899999999999999999999999987 799999999999999999999887788999999999999999998864   


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        ++|+|+|.|+.-+-+  .-+.++.+.+.+|+.|+.++++++...-.+         ++|.+|+-.+.           
T Consensus       325 --kvd~VfHAAA~KHVP--l~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV-----------  380 (588)
T COG1086         325 --KVDIVFHAAALKHVP--LVEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAV-----------  380 (588)
T ss_pred             --CCceEEEhhhhccCc--chhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCccc-----------
Confidence              799999999975433  255667788999999999999999877544         89999996544           


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             .+-..|++||...+.++.+++......+  .++.+|+=|.|-..-..-.
T Consensus       381 -------~PtNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGSVi  427 (588)
T COG1086         381 -------NPTNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGSVI  427 (588)
T ss_pred             -------CCchHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCCCH
Confidence                   4567999999999999999998777554  7788899998876554433

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=1.8e-17  Score=149.44  Aligned_cols=189  Identities=12%  Similarity=0.042  Sum_probs=134.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC---CCceeEEEccCCCHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .+.++++++|||||+|.||.+++++|.++|++|++++|...........+...++   ..++.++.+|+.|.+++..+++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            4677889999999999999999999999999999999865433322222221111   1357889999999888877765


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                             .+|+|||.|+......  +.++....+++|+.++..+++++...         +-.++|++||...+... .+
T Consensus        90 -------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~---------~~~~~v~~SS~~vyg~~-~~  150 (348)
T PRK15181         90 -------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA---------HVSSFTYAASSSTYGDH-PD  150 (348)
T ss_pred             -------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeechHhhCCC-CC
Confidence                   4799999999643321  23445567999999999998877432         23489999997554311 11


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .   +..+..+..+...|+.+|.+.+.+++.++.+.   |  +++..++|+.+..|...
T Consensus       151 ~---~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~  201 (348)
T PRK15181        151 L---PKIEERIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQN  201 (348)
T ss_pred             C---CCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCC
Confidence            1   12223333445689999999988887765553   4  77788999999998654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.78  E-value=1.4e-17  Score=145.05  Aligned_cols=188  Identities=18%  Similarity=0.159  Sum_probs=135.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++||||||.||+.|++.|+++||.|....|+++....  .+.++...  ..+...+.+|++|+++++..++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            67999999999999999999999999999999999887433  24444322  3458899999999999999988     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        ..|+|+|.|.......  + +.-.+.++..+.|+.++++++...-.        =.|||++||.++....-.....+.
T Consensus        78 --gcdgVfH~Asp~~~~~--~-~~e~~li~pav~Gt~nVL~ac~~~~s--------VkrvV~TSS~aAv~~~~~~~~~~~  144 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDL--E-DPEKELIDPAVKGTKNVLEACKKTKS--------VKRVVYTSSTAAVRYNGPNIGENS  144 (327)
T ss_pred             --CCCEEEEeCccCCCCC--C-CcHHhhhhHHHHHHHHHHHHHhccCC--------cceEEEeccHHHhccCCcCCCCCc
Confidence              4799999998644311  1 12236799999999999999877641        138999999888764211111111


Q ss_pred             CCCCCCCCC-------CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNG-------FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~-------~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.....+..       -..|..+|.-    ++..|.++++++ .+.+.+|+|+.|-+|...+
T Consensus       145 vvdE~~wsd~~~~~~~~~~Y~~sK~l----AEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  145 VVDEESWSDLDFCRCKKLWYALSKTL----AEKAAWEFAKEN-GLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ccccccCCcHHHHHhhHHHHHHHHHH----HHHHHHHHHHhC-CccEEEecCCceECCCccc
Confidence            222222211       1368888876    555555665543 2777889999999999887

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=2.5e-17  Score=139.68  Aligned_cols=200  Identities=20%  Similarity=0.151  Sum_probs=148.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++|||||.|+||.++++++.+..-  +|+.++.-.  .....+.+.......+..++++|+.|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT--YAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT--YAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc--ccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            4789999999999999999998765  466665321  1111222222222458999999999999999998874     


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc--C
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD--K  187 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~--~  187 (282)
                      ++|+|+|-|+-.+  .|-+.++....+++|+.|++.++.++..+..+        .+++.+|.--.+.    ++..+  .
T Consensus        74 ~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTDEVYG----~l~~~~~~  139 (340)
T COG1088          74 QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTDEVYG----DLGLDDDA  139 (340)
T ss_pred             CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEeccccccc----cccCCCCC
Confidence            7999999998543  46677788889999999999999999888643        4899999854432    33332  5


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhcccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKN  267 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  267 (282)
                      +++..|..+.++|+||||+..++++++.+.++     +.+...++..-+.|-.-..    .      .+|..+-..+...
T Consensus       140 FtE~tp~~PsSPYSASKAasD~lVray~~TYg-----lp~~ItrcSNNYGPyqfpE----K------lIP~~I~nal~g~  204 (340)
T COG1088         140 FTETTPYNPSSPYSASKAASDLLVRAYVRTYG-----LPATITRCSNNYGPYQFPE----K------LIPLMIINALLGK  204 (340)
T ss_pred             cccCCCCCCCCCcchhhhhHHHHHHHHHHHcC-----CceEEecCCCCcCCCcCch----h------hhHHHHHHHHcCC
Confidence            77889999999999999999999999999875     5566678877777764432    2      3555555555444

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.75  E-value=9e-17  Score=142.20  Aligned_cols=183  Identities=16%  Similarity=0.085  Sum_probs=130.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++||||+|+||.+++++|++.|  ++|++++|... ...+..+.+..   ..++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  68988876421 11111222211   235788899999999999888763     


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+|||+|+....  +.+.+..+..+++|+.++..+++++.....        +.++|++||...+.. ....  .+..
T Consensus        73 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~-~~~~--~~~~  139 (317)
T TIGR01181        73 QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGD-LEKG--DAFT  139 (317)
T ss_pred             CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCC-CCCC--CCcC
Confidence            68999999996432  234456677899999999998887755432        247999999654321 1110  1244


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +..+..+...|+.+|.+.+.+++.++.+.   +  +++..++|+.+..|...
T Consensus       140 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~i~G~~~~  186 (317)
T TIGR01181       140 ETTPLAPSSPYSASKAASDHLVRAYHRTY---G--LPALITRCSNNYGPYQF  186 (317)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCC
Confidence            44455566789999999999999887765   3  67778999999887643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=1.1e-16  Score=136.46  Aligned_cols=172  Identities=20%  Similarity=0.151  Sum_probs=132.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|-||++++.+|++.|++|+++|.-...-.+..+..       .+.++++|+.|.+.+++++++.     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            47999999999999999999999999999997766555444332       1578999999999999998875     89


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |.|||.||...-  ..+.++..+.++-|+.+++.+++++..+-.         .++||-||++ .++....   -|+.+.
T Consensus        69 daViHFAa~~~V--gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv---------~~~vFSStAa-vYG~p~~---~PI~E~  133 (329)
T COG1087          69 DAVVHFAASISV--GESVQNPLKYYDNNVVGTLNLIEAMLQTGV---------KKFIFSSTAA-VYGEPTT---SPISET  133 (329)
T ss_pred             CEEEECcccccc--chhhhCHHHHHhhchHhHHHHHHHHHHhCC---------CEEEEecchh-hcCCCCC---cccCCC
Confidence            999999996432  347778889999999999998888766643         3677666654 4443332   357788


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI  235 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v  235 (282)
                      .+..+..+|+.||.+.+.+.+.++....     .++.+++-..+
T Consensus       134 ~~~~p~NPYG~sKlm~E~iL~d~~~a~~-----~~~v~LRYFN~  172 (329)
T COG1087         134 SPLAPINPYGRSKLMSEEILRDAAKANP-----FKVVILRYFNV  172 (329)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHhCC-----CcEEEEEeccc
Confidence            8888899999999999999888887764     34444554433

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.75  E-value=1.2e-16  Score=144.01  Aligned_cols=192  Identities=14%  Similarity=0.076  Sum_probs=130.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGVH-VVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++|||||+|+||.+++++|++.|++ |+.+++... ........+   .++.++.++.+|++|.+++.++++..     +
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV---SDSERYVFEHADICDRAELDRIFAQH-----Q   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhc---ccCCceEEEEecCCCHHHHHHHHHhc-----C
Confidence            5899999999999999999999986 555554321 111111111   11345778899999999999988763     7


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc--CCc----c
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EGI----R  184 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~----~  184 (282)
                      +|+|||+|+....  ..+.+..+..+++|+.++..+++++.+++.......++..++|++||...+....  .+.    .
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (352)
T PRK10084         74 PDAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEE  151 (352)
T ss_pred             CCEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccccc
Confidence            9999999996432  1123345678999999999999999887643211101234899999865442110  000    0


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .+.+.++.+..+...|+.+|.+.+.+++.++.++.     +.+..+.|+.+..|.
T Consensus       152 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~  201 (352)
T PRK10084        152 LPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPY  201 (352)
T ss_pred             CCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCC
Confidence            11244555666677899999999999999887753     444557888887775

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.74  E-value=7.9e-17  Score=140.76  Aligned_cols=184  Identities=17%  Similarity=0.118  Sum_probs=129.5

Q ss_pred             EEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           35 IVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        35 lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      |||||+|+||.+|+++|++.|  ++|.++++.......  ..+..   .....++.+|++|.+++.++++       ..|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  688888877654221  11111   1123389999999999999887       568


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc--CCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD--KIND  190 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~--~~~~  190 (282)
                      +|||+|+......   ....+..+++|+.|+-++++++...         +-.++|++||.++...+....+..  +...
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~---------~VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA---------GVKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999654322   3455778999999999999888754         234899999988765422111111  1112


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.+......|+.||+..|.++......-.+.|..++..+|+|..|..|....
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~  188 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR  188 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc
Confidence            2233356689999999888877655411122334888899999999997543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.73  E-value=1.6e-17  Score=143.29  Aligned_cols=169  Identities=21%  Similarity=0.232  Sum_probs=125.2

Q ss_pred             EEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCcee----EEEccCCCHHHHHHHHHHHHhcC
Q 023438           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~----~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +|||||+|.||++++++|++.+. +++++++++..+-.+.+++.+.+++.++.    ++.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999985 79999999999999999987766554443    4578999999999988865    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+|+|.|+.-+.+  .-++.+.+.+++|+.|+.++++++..+-.         .++|++|+-.+.            
T Consensus        77 -~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~~v---------~~~v~ISTDKAv------------  132 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEHGV---------ERFVFISTDKAV------------  132 (293)
T ss_dssp             -T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGCS------------
T ss_pred             -CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEccccccC------------
Confidence             899999999974432  23356678899999999999999887643         389999996543            


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                            .+...|++||...+.++.+++......+  .++.+|+=|.|...
T Consensus       133 ------~PtnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS  174 (293)
T PF02719_consen  133 ------NPTNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGS  174 (293)
T ss_dssp             ------S--SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTG
T ss_pred             ------CCCcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecC
Confidence                  3467999999999999999888876655  78888998888653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.73  E-value=4e-16  Score=139.80  Aligned_cols=181  Identities=17%  Similarity=0.097  Sum_probs=123.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||.+++++|++.|++|++++|...........+.+ ..+.++.++.+|++|.+++..+++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            689999999999999999999999999988653332222222222 1234577889999999988888764     2799


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+.....  ...+.....+++|+.++..+++++.    +.     +.+++|++||...+. ...   ..++.+..
T Consensus        76 ~vvh~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~-----~~~~~v~~Ss~~~yg-~~~---~~~~~E~~  140 (338)
T PRK10675         76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMR----AA-----NVKNLIFSSSATVYG-DQP---KIPYVESF  140 (338)
T ss_pred             EEEECCcccccc--chhhCHHHHHHHHHHHHHHHHHHHH----Hc-----CCCEEEEeccHHhhC-CCC---CCcccccc
Confidence            999999865321  1223445678999999888877653    32     235899999965432 111   11233333


Q ss_pred             CC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          193 GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       193 ~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +. .+...|+.+|.+.+.+++.++.+..  +  +++..++++.+.++
T Consensus       141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~--~~~~ilR~~~v~g~  183 (338)
T PRK10675        141 PTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGA  183 (338)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhcC--C--CcEEEEEeeeecCC
Confidence            43 3467899999999999998876643  2  55555776655554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.71  E-value=9.5e-16  Score=139.17  Aligned_cols=192  Identities=13%  Similarity=0.047  Sum_probs=129.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ....++|++|||||+|+||.+++++|+++|++|+++.|+.+..... +++....    ...++.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            3557789999999999999999999999999999988886554433 2221100    0125788999999999988887


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc-cccc-
Q 023438          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAY-  179 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~-~~~~-  179 (282)
                      +       .+|.++|.|+.........  ......++|+.++..+++++...-        +-.++|++||.++ .++. 
T Consensus       127 ~-------~~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~~--------~v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRTE--------SVRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             H-------hccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccHHHhccccc
Confidence            6       3588999998653321111  112346778888888877765431        1238999999642 2221 


Q ss_pred             -cCCccccCCCCC------CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          180 -HEGIRFDKINDP------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       180 -~~~~~~~~~~~~------~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                       ....+ ..+.+.      .+..+...|+.+|.+.+.+++.++.+   .|  +++++++|+.+.+|...
T Consensus       190 ~~~~~~-~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--l~~v~lRp~~vyGp~~~  252 (367)
T PLN02686        190 YPHDLP-PVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KG--LKLATICPALVTGPGFF  252 (367)
T ss_pred             CCCCCC-cccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cC--ceEEEEcCCceECCCCC
Confidence             00100 011111      12234457999999999988877665   35  89999999999999643

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.71  E-value=1.9e-15  Score=128.22  Aligned_cols=174  Identities=21%  Similarity=0.201  Sum_probs=132.7

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      ||||||+|.||.+++++|.++|+.|+.+.|+...........       ++.++.+|+.|.++++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-------NVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-------TEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-------eEEEEEeecccccccccccccc-----CceE
Confidence            799999999999999999999999988888766543332221       6889999999999999999986     8999


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCC
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  193 (282)
                      |||+|+...  ...+.+.....++.|+.++..+++++...         +..++|++||...+. ..   ...++.++.+
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~sS~~~y~-~~---~~~~~~e~~~  133 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREA---------GVKRFIFLSSASVYG-DP---DGEPIDEDSP  133 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHH---------TTSEEEEEEEGGGGT-SS---SSSSBETTSG
T ss_pred             EEEeecccc--ccccccccccccccccccccccccccccc---------ccccccccccccccc-cc---cccccccccc
Confidence            999999643  12233566777888888877776666544         235999999944332 22   1123455555


Q ss_pred             CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          194 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       194 ~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ......|+.+|...+.+++.+..+.   +  +++..++|+.+..|.
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  134 INPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPG  174 (236)
T ss_dssp             CCHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccc---c--ccccccccccccccc
Confidence            5667779999999999888887765   4  788889999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.70  E-value=9.8e-16  Score=136.39  Aligned_cols=173  Identities=24%  Similarity=0.236  Sum_probs=125.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+|+||.+++++|++.|++|++++|+.+....    +.    ...+.++.+|++|.+++.++++       ++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            369999999999999999999999999999998654321    11    2257889999999998888765       57


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+....    ..++.+..+++|+.++..+++++...         +.+++|++||..++.......   +..++
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~---~~~e~  129 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA---------GVERVVYTSSVATLGVRGDGT---PADET  129 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEechhhcCcCCCCC---CcCcc
Confidence            999999985322    22345678999999988888876532         235899999976543211111   12222


Q ss_pred             CCCC---CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          192 SGYN---GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       192 ~~~~---~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .+..   ....|+.+|.+.+.+++.++.+.   +  +.+..++|+.+.++..
T Consensus       130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~  176 (328)
T TIGR03466       130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRD  176 (328)
T ss_pred             CCCCcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCC
Confidence            2222   24579999999998888876653   5  6777799999987753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.70  E-value=1.1e-15  Score=135.74  Aligned_cols=180  Identities=21%  Similarity=0.184  Sum_probs=128.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|+||.+++++|++.|++|++++|...........+.+   ...+.++.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            479999999999999999999999999887654332222222211   11577889999999999888774     3799


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||||||.....  .+.++..+.++.|+.++..+++++...         +..++|++||...+ +...   ..++.++.
T Consensus        73 ~vv~~ag~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~ss~~~~-g~~~---~~~~~e~~  137 (328)
T TIGR01179        73 AVIHFAGLIAVG--ESVQDPLKYYRNNVVNTLNLLEAMQQT---------GVKKFIFSSSAAVY-GEPS---SIPISEDS  137 (328)
T ss_pred             EEEECccccCcc--hhhcCchhhhhhhHHHHHHHHHHHHhc---------CCCEEEEecchhhc-CCCC---CCCccccC
Confidence            999999965332  133445567899999999888765332         23589998886543 2111   11244455


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +..+...|+.+|++.+.+++.++.+.  .+  +++..++|+.+.++.
T Consensus       138 ~~~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       138 PLGPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGAD  180 (328)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCCC
Confidence            55567789999999999999887652  24  677779999888774

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.68  E-value=2.2e-15  Score=137.72  Aligned_cols=189  Identities=13%  Similarity=0.025  Sum_probs=123.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+++.++||||||+|+||++++++|++. |++|++++|+............... ..++.++.+|++|.+.+.++++   
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~---   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK---   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh---
Confidence            3456678999999999999999999998 5899999987554322211100001 1358899999999988887765   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC----
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE----  181 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~----  181 (282)
                          .+|+|||+|+......  ...+..+.+..|+.++..+++++...          +.++|++||...+.....    
T Consensus        86 ----~~d~ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~vYg~~~~~~~~  149 (386)
T PLN02427         86 ----MADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEVYGKTIGSFLP  149 (386)
T ss_pred             ----cCCEEEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeeeeCCCcCCCCC
Confidence                4699999999654311  11223345678999988887766422          248999999754321111    


Q ss_pred             -CccccC------CCCCC-C------CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          182 -GIRFDK------INDPS-G------YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       182 -~~~~~~------~~~~~-~------~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                       +.+..+      ..++. +      ......|+.+|.+.+.++..++..   .|  +.+..++|+.+.+|..
T Consensus       150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~  217 (386)
T PLN02427        150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRM  217 (386)
T ss_pred             cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCC
Confidence             101000      00000 0      012346999999988888765543   35  7777899999998864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.65  E-value=1e-14  Score=125.62  Aligned_cols=173  Identities=21%  Similarity=0.222  Sum_probs=111.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~  105 (282)
                      -..++++++||||+|+||++++++|++.|++|+++.|+.+......    ..  +.++.++.+|+++. +++   .+.+.
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~~~l---~~~~~   83 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGSDKL---VEAIG   83 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCHHHH---HHHhh
Confidence            3456789999999999999999999999999999999876543221    11  23588899999983 333   22221


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                         .++|+||+++|......  .    ...+++|+.+...+++++.    +.     +.++||++||.+.+...      
T Consensus        84 ---~~~d~vi~~~g~~~~~~--~----~~~~~~n~~~~~~ll~a~~----~~-----~~~~iV~iSS~~v~g~~------  139 (251)
T PLN00141         84 ---DDSDAVICATGFRRSFD--P----FAPWKVDNFGTVNLVEACR----KA-----GVTRFILVSSILVNGAA------  139 (251)
T ss_pred             ---cCCCEEEECCCCCcCCC--C----CCceeeehHHHHHHHHHHH----Hc-----CCCEEEEEccccccCCC------
Confidence               26899999998632111  1    1124678888777777753    22     34699999997543210      


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHH-HHHHHH-hccCCCcEEEEEeeCCccccCcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHA-NELARR-LKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~-~~la~e-~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                            .+.+....|...|.....+. +..+.+ +...|  ++++.|+||++.++..
T Consensus       140 ------~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~  188 (251)
T PLN00141        140 ------MGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPP  188 (251)
T ss_pred             ------cccccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCC
Confidence                  01122334555554333322 222222 34567  8899999999987653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.64  E-value=2.2e-14  Score=130.34  Aligned_cols=182  Identities=16%  Similarity=0.109  Sum_probs=124.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.-++++++||||+|.||.+++++|.+.|++|++++|.....      +...  ...+.++.+|+++.+.+..+++    
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   84 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK----   84 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh----
Confidence            334778999999999999999999999999999999864321      1000  1125678899999887766553    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc-
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-  185 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-  185 (282)
                         ++|+|||+|+...... ....+....+..|+.++..+++++...         +-.++|++||...+. ....... 
T Consensus        85 ---~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~---------~vk~~V~~SS~~vYg-~~~~~~~~  150 (370)
T PLN02695         85 ---GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN---------GVKRFFYASSACIYP-EFKQLETN  150 (370)
T ss_pred             ---CCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh---------CCCEEEEeCchhhcC-CccccCcC
Confidence               5799999998543211 111223445778999988888876432         234899999965432 1111110 


Q ss_pred             cCCCCCC--CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPS--GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~--~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .++.++.  +..+...|+.+|.+.+.+++.++..+   |  +.+..++|+.+..|-
T Consensus       151 ~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~  201 (370)
T PLN02695        151 VSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPF  201 (370)
T ss_pred             CCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCC
Confidence            0122222  45566789999999998888776543   5  677789999999885

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=1.4e-14  Score=141.34  Aligned_cols=189  Identities=15%  Similarity=0.036  Sum_probs=127.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++||||||+|+||++++++|++.  |++|+.++|.... .. ...+.......++.++.+|++|.+.+..++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~-~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SN-LKNLNPSKSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-ch-hhhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence            46789999999999999999999998  6789988875211 11 11111111134688999999998877766533   


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        .++|+|||+|+....  +....+....+++|+.++..+++++...-        .-.++|++||...+.. .......
T Consensus        79 --~~~D~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~vkr~I~~SS~~vyg~-~~~~~~~  145 (668)
T PLN02260         79 --EGIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVTG--------QIRRFIHVSTDEVYGE-TDEDADV  145 (668)
T ss_pred             --cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEEcchHHhCC-Ccccccc
Confidence              279999999996533  12233445678999999888877764321        1358999999754421 1111101


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ...++.+..+...|+.+|.+.+.+++.+..++   +  +.+..++|+.+..|-.
T Consensus       146 ~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~  194 (668)
T PLN02260        146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQ  194 (668)
T ss_pred             CccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCC
Confidence            12233344456689999999998888776654   4  6667799999998854

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.62  E-value=1.5e-14  Score=140.77  Aligned_cols=177  Identities=12%  Similarity=0.018  Sum_probs=123.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~  106 (282)
                      .+++++|||||+|+||.+++++|++. |++|+.++|.......    +..   ..++.++.+|++|..+ ++++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~---~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG---HPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC---CCceEEEeccccCcHHHHHHHhc----
Confidence            46789999999999999999999986 7999999997643221    111   2358889999998654 333332    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+|+...+..  ..++....+++|+.++..+++++...         + .++|++||...+. ...+.   
T Consensus       382 ---~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~---------~-~~~V~~SS~~vyg-~~~~~---  442 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY---------N-KRIIFPSTSEVYG-MCTDK---  442 (660)
T ss_pred             ---CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc---------C-CeEEEEcchhhcC-CCCCC---
Confidence               5899999999754321  22334567899999999888887643         1 4899999975432 11111   


Q ss_pred             CCCCCCC------C-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KINDPSG------Y-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~~~~~------~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ++.++.+      . .....|+.+|.+.+.+++.++.++   |  +++..++|+.+..|..
T Consensus       443 ~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        443 YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRL  498 (660)
T ss_pred             CcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCc
Confidence            1222221      1 233579999999998888876554   4  6777799999988853

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.62  E-value=2.2e-14  Score=129.24  Aligned_cols=174  Identities=9%  Similarity=0.001  Sum_probs=118.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC-CHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~~i~~~~~~i~~~~g  109 (282)
                      ++++||||+|.||.+++++|++. |++|+.++|+.....    .+.   +...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            57999999999999999999986 699999998754322    111   1235888999998 6666655543       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+|||+|+...+..  ..++....+++|+.++..+++++...          +.++|++||...+ +...+.   ++.
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~vy-g~~~~~---~~~  131 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVY-GMCPDE---EFD  131 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecceee-ccCCCc---CcC
Confidence            5799999999643321  23344567899999988877766432          2489999997543 221111   122


Q ss_pred             CCC------C-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          190 DPS------G-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       190 ~~~------~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ++.      + ..+...|+.+|.+.+.+++.++...   |  +.+..++|+.+..|..
T Consensus       132 ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        132 PEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGL  184 (347)
T ss_pred             ccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCc
Confidence            111      1 1234479999999888888776543   4  5556689988888753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.62  E-value=1.4e-14  Score=128.28  Aligned_cols=173  Identities=14%  Similarity=0.127  Sum_probs=115.0

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh--cCCCc
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QHHQL  111 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~--~~g~i  111 (282)
                      +|||||+|+||++++++|++.|++++++.|+....... .           ....+|+.|..+.+.+++.+..  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766665554321110 0           1123577766666655555432  34579


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+..... ..   +....++.|+.++..+++++...          +.++|++||.+.+. ...+   ....+.
T Consensus        70 d~Vih~A~~~~~~-~~---~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg-~~~~---~~~~E~  131 (308)
T PRK11150         70 EAIFHEGACSSTT-EW---DGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYG-GRTD---DFIEER  131 (308)
T ss_pred             cEEEECceecCCc-CC---ChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhC-cCCC---CCCccC
Confidence            9999999854321 11   22456899999988888776432          23799999976542 2111   123333


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+..+...|+.+|.+.+.+++.+..+.   +  +.+..++|+.+..|...
T Consensus       132 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~~  176 (308)
T PRK11150        132 EYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPREG  176 (308)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCCC
Confidence            444556789999999888887775543   4  66777999999887643

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.61  E-value=2.5e-14  Score=125.29  Aligned_cols=154  Identities=21%  Similarity=0.202  Sum_probs=114.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||.+++++|.+.|++|++++|+                       .+|+.+.+++.++++.+     ++|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            47999999999999999999999999999874                       36999999998887763     689


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....  ..........+++|+.++..+++++...          +.++|++||...+..    ....+++++.
T Consensus        53 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~----~~~~~~~E~~  116 (287)
T TIGR01214        53 AVVNTAAYTDV--DGAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDG----EGKRPYREDD  116 (287)
T ss_pred             EEEECCccccc--cccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecC----CCCCCCCCCC
Confidence            99999996432  1122345667899999988888876421          248999999654421    1112344444


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +..+...|+.+|.+.+.+++.+       +  ..+..++|+.+..+.
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGG  154 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCC
Confidence            4555678999999988777654       2  345669999998876

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.61  E-value=1.5e-14  Score=127.83  Aligned_cols=177  Identities=20%  Similarity=0.105  Sum_probs=126.7

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      +|||||+|+||.+++++|.+.|++|+.++|.........         ..+.++.+|+++.+.+...++..     . |+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-DA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence            999999999999999999999999999999765533322         24778889999986555555532     2 99


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC-C
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-S  192 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~-~  192 (282)
                      |||+|+.......... +....+.+|+.++..+++++...         +..++|+.||.+.....+..   ..+.++ .
T Consensus        68 vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~---------~~~~~v~~ss~~~~~~~~~~---~~~~E~~~  134 (314)
T COG0451          68 VIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARAA---------GVKRFVFASSVSVVYGDPPP---LPIDEDLG  134 (314)
T ss_pred             EEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCCCceECCCCCC---CCcccccC
Confidence            9999997544222222 55678999999999988888761         34588886665544432111   123333 2


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      +..+...|+.+|.+.+.++..+..   ..|  +.+..++|+.+..|.....
T Consensus       135 ~~~p~~~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~  180 (314)
T COG0451         135 PPRPLNPYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPD  180 (314)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCC
Confidence            333333799999999988888887   345  6777799999998876554

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.61  E-value=2.1e-14  Score=126.86  Aligned_cols=157  Identities=13%  Similarity=0.088  Sum_probs=112.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|.||++++++|.+.| +|+.++|...                   .+.+|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888887521                   2347999999998888764     689


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....  +...++.+..+.+|+.++..+++++...          +.++|++||...+.+ ...   .+..++.
T Consensus        57 ~Vih~Aa~~~~--~~~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy~~-~~~---~p~~E~~  120 (299)
T PRK09987         57 VIVNAAAHTAV--DKAESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVFPG-TGD---IPWQETD  120 (299)
T ss_pred             EEEECCccCCc--chhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEECC-CCC---CCcCCCC
Confidence            99999997543  1233445667889999988888776543          247999998665422 111   2344455


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +..+...|+.+|.+.+.+++.+.    ..   .  ..++|+++..|.
T Consensus       121 ~~~P~~~Yg~sK~~~E~~~~~~~----~~---~--~ilR~~~vyGp~  158 (299)
T PRK09987        121 ATAPLNVYGETKLAGEKALQEHC----AK---H--LIFRTSWVYAGK  158 (299)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhC----CC---E--EEEecceecCCC
Confidence            55566789999999887765442    21   2  347777777764

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.61  E-value=6.3e-14  Score=129.92  Aligned_cols=182  Identities=14%  Similarity=0.086  Sum_probs=121.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+.-++++||||||+|+||++++++|+++|++|++++|......+..   .......++.++.+|+.+..     +    
T Consensus       114 ~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~---~~~~~~~~~~~i~~D~~~~~-----l----  181 (442)
T PLN02206        114 GLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNPNFELIRHDVVEPI-----L----  181 (442)
T ss_pred             ccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh---hhhccCCceEEEECCccChh-----h----
Confidence            44457899999999999999999999999999999987543222211   11122335778888987642     1    


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                         ..+|+|||+|+...+..  ...+..+.+++|+.++..+++++...          +.++|++||...+.. ....+.
T Consensus       182 ---~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~VYg~-~~~~p~  245 (442)
T PLN02206        182 ---LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYGD-PLQHPQ  245 (442)
T ss_pred             ---cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChHHhCC-CCCCCC
Confidence               15899999998654321  12235678999999999888877532          238999999765432 111111


Q ss_pred             cCC--CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          186 DKI--NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 ~~~--~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +.-  ....+......|+.+|.+.+.++..+....   +  +++..++|+.+..|..
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~  297 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRM  297 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCC
Confidence            100  011234446789999999888877765543   4  5666689988888753

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.60  E-value=1.6e-14  Score=124.32  Aligned_cols=169  Identities=18%  Similarity=0.140  Sum_probs=130.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++||||||+|.||.+.+.+|.+.|+.|+++|.-.....+..+.+++... +..+.++..|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57999999999999999999999999999998665555555555555432 367999999999999999999986     


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|.|+|-|+...-  -.+.++....+..|+.+++.++.....+-         -..+|+.||+..+. .+..+   |+.
T Consensus        77 ~fd~V~Hfa~~~~v--geS~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssatvYG-~p~~i---p~t  141 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV--GESMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSATVYG-LPTKV---PIT  141 (343)
T ss_pred             CCceEEeehhhhcc--chhhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEecceeeec-Cccee---ecc
Confidence            69999999996432  22445557889999999999887776663         34788888865543 22222   355


Q ss_pred             CCCCCC-CCccchHhHHHHHHHHHHHHHHhc
Q 023438          190 DPSGYN-GFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       190 ~~~~~~-~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      +..+.. +...|+.+|.+++..+..+...+.
T Consensus       142 e~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  142 EEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            555565 678999999999998888877665

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.59  E-value=9e-14  Score=125.29  Aligned_cols=179  Identities=21%  Similarity=0.193  Sum_probs=116.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhH---HHHHHHHHHhCC-----C-CceeEEEccCCCHH------
Q 023438           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAG---KDVKETIVKEIP-----S-AKVDAMELDLSSLA------   95 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~---~~~~~~l~~~~~-----~-~~v~~~~~Dvs~~~------   95 (282)
                      +++||||+|+||.+++++|++.|  ++|+++.|+....   +...+.+.....     . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999986532   122222211100     0 36889999998652      


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      ....+.       ..+|+|||||+.....     ..+...+++|+.++..+++.+...         +..+++++||.+.
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~---------~~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG---------RAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC---------CCceEEEEccccc
Confidence            333322       3689999999965321     234566789999988887766432         2346999999766


Q ss_pred             cccccCC-ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          176 RLAYHEG-IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       176 ~~~~~~~-~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      ....... ...+.............|+.+|.+.+.+++.+..    .|  ++++.++||.+.++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG--LPVTIVRPGRILGN  197 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC--CCEEEECCCceeec
Confidence            5321110 0000000011112345799999998887766543    36  88889999999886

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.58  E-value=1.3e-13  Score=127.54  Aligned_cols=178  Identities=15%  Similarity=0.082  Sum_probs=120.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.-+.++|+||||+|+||.+++++|+++|++|++++|...........+   ....++.++..|+.+..     +     
T Consensus       116 ~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-----  182 (436)
T PLN02166        116 IGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-----  182 (436)
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-----
Confidence            3345679999999999999999999999999999998643222211111   11235778888887632     1     


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        .++|+|||+|+......  ...+....+++|+.++..+++++...          +.++|++||...+. +....   
T Consensus       183 --~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~VYg-~~~~~---  244 (436)
T PLN02166        183 --LEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEVYG-DPLEH---  244 (436)
T ss_pred             --cCCCEEEECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHHhC-CCCCC---
Confidence              25899999998643321  12244678999999998888777543          23899999965442 21111   


Q ss_pred             CCCCC-----CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KINDP-----SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~~~-----~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +..++     .+......|+.+|.+.+.+++.+....   +  +++..++|+.+..|..
T Consensus       245 p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~  298 (436)
T PLN02166        245 PQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRM  298 (436)
T ss_pred             CCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCC
Confidence            12222     244456689999999888888776543   4  5666699999988864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.56  E-value=1.7e-13  Score=125.34  Aligned_cols=164  Identities=18%  Similarity=0.162  Sum_probs=114.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++++||||+|+||.+++++|++.|++|++++|+......  ..+++...  ..++.++.+|++|++++.++++.+. 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~-  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSEG-  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHhC-
Confidence            467899999999999999999999999999999998755321  11122222  2358899999999999999887541 


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        +++|+||||++.....       ....+++|+.++..+++++.    +.     +-.++|++||....          
T Consensus       135 --~~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~-----gv~r~V~iSS~~v~----------  186 (390)
T PLN02657        135 --DPVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EV-----GAKHFVLLSAICVQ----------  186 (390)
T ss_pred             --CCCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----Hc-----CCCEEEEEeecccc----------
Confidence              2689999999842211       11336678888776666653    32     34589999996432          


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                              .+...|..+|...+...+.     ...+  ++...|+|+.+..+
T Consensus       187 --------~p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~  223 (390)
T PLN02657        187 --------KPLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKS  223 (390)
T ss_pred             --------CcchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcc
Confidence                    1234577888887665543     2345  67777999877644

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.55  E-value=2.5e-13  Score=120.31  Aligned_cols=173  Identities=12%  Similarity=0.004  Sum_probs=115.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +|||||+|+||.+++++|.+.|+ +|++++|..... . ..++       ....+..|+++.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-------~~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-------ADLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-------hheeeeccCcchhHHHHHHhh---ccCCCC
Confidence            68999999999999999999998 788887754321 1 1111       113456788887766665543   345899


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....    +.++....+++|+.++..+++++...          +.++|++||...+. ...    .+..++.
T Consensus        69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~vy~-~~~----~~~~e~~  129 (314)
T TIGR02197        69 AIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAATYG-DGE----AGFREGR  129 (314)
T ss_pred             EEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHhcC-CCC----CCccccc
Confidence            99999996432    33455678899999988888876542          23799999965432 111    1222222


Q ss_pred             C-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          193 G-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       193 ~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      + ..+...|+.+|.+.+.+++....... .+  +.+..++|+.+..|..
T Consensus       130 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~--~~~~~lR~~~vyG~~~  175 (314)
T TIGR02197       130 ELERPLNVYGYSKFLFDQYVRRRVLPEA-LS--AQVVGLRYFNVYGPRE  175 (314)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHhHhhc-cC--CceEEEEEeeccCCCC
Confidence            2 23466899999998888775433221 12  5667789998888753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.53  E-value=1.6e-13  Score=121.04  Aligned_cols=160  Identities=18%  Similarity=0.102  Sum_probs=112.5

Q ss_pred             EEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEE
Q 023438           35 IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL  114 (282)
Q Consensus        35 lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~v  114 (282)
                      |||||+|+||.+++++|.+.|++|+++.+.                      ..+|+++.+++.++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987765432                      137999999988887763     68999


Q ss_pred             EEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC--
Q 023438          115 INNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS--  192 (282)
Q Consensus       115 i~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~--  192 (282)
                      ||+|+...... ...++....+++|+.++..+++++...         +-.++|++||...+. ....   .++.++.  
T Consensus        54 ih~A~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~SS~~vyg-~~~~---~~~~E~~~~  119 (306)
T PLN02725         54 ILAAAKVGGIH-ANMTYPADFIRENLQIQTNVIDAAYRH---------GVKKLLFLGSSCIYP-KFAP---QPIPETALL  119 (306)
T ss_pred             EEeeeeecccc-hhhhCcHHHHHHHhHHHHHHHHHHHHc---------CCCeEEEeCceeecC-CCCC---CCCCHHHhc
Confidence            99999643211 112234456889999988888777543         234899999965432 1111   1222221  


Q ss_pred             --CC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          193 --GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       193 --~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                        +. +....|+.+|.+.+.+++.+..+.   +  +++..++|+.+..|..
T Consensus       120 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~  165 (306)
T PLN02725        120 TGPPEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPHD  165 (306)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCC
Confidence              22 223359999999988887776554   4  6778899999998863

>PLN02996 fatty acyl-CoA reductase

Probab=99.48  E-value=1.9e-12  Score=121.68  Aligned_cols=188  Identities=14%  Similarity=0.112  Sum_probs=120.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhh--HH-HHHHH---------HHHhCC-------CCcee
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAA--GK-DVKET---------IVKEIP-------SAKVD   85 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~--~~-~~~~~---------l~~~~~-------~~~v~   85 (282)
                      -++||+++||||||+||+.++++|++.+.   +|++..|....  .. ....+         +.+.++       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            36899999999999999999999998653   67888886532  11 11111         111111       14789


Q ss_pred             EEEccCCCH-------HHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 023438           86 AMELDLSSL-------ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTA  158 (282)
Q Consensus        86 ~~~~Dvs~~-------~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~  158 (282)
                      ++.+|++++       +.++.+++       .+|+|||+|+....     .++....+++|+.++..+++.+...-    
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~----  151 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLNFAKKCV----  151 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHHHHHhcC----
Confidence            999999843       33444443       58999999996542     13466789999999888887765431    


Q ss_pred             ccCCCCCeEEEEcCCcccccccC---CccccCCC-------------------------------------------CC-
Q 023438          159 RKSGGEGRIINVSSEGHRLAYHE---GIRFDKIN-------------------------------------------DP-  191 (282)
Q Consensus       159 ~~~~~~g~iv~vsS~~~~~~~~~---~~~~~~~~-------------------------------------------~~-  191 (282)
                          +-.++|++||...+....+   +.+|++-.                                           +. 
T Consensus       152 ----~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (491)
T PLN02996        152 ----KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERA  227 (491)
T ss_pred             ----CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHH
Confidence                1247999998765432111   11111000                                           00 


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ........|+.||+..+.+++..+     .+  +.+..++|+.|..+...+
T Consensus       228 ~~~~~pn~Y~~TK~~aE~lv~~~~-----~~--lpv~i~RP~~V~G~~~~p  271 (491)
T PLN02996        228 KLHGWPNTYVFTKAMGEMLLGNFK-----EN--LPLVIIRPTMITSTYKEP  271 (491)
T ss_pred             HhCCCCCchHhhHHHHHHHHHHhc-----CC--CCEEEECCCEeccCCcCC
Confidence            011123469999999888886542     25  777789999998887443

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.48  E-value=7.1e-13  Score=116.35  Aligned_cols=153  Identities=20%  Similarity=0.227  Sum_probs=105.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|.||.+++++|.+.|++|+.++|+                       .+|++|.+++.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            79999999999999999999999999988765                       46999999999999887     799


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||||++...  +..+++.+..+.+|+.++..+++.+...          +.++|++||...+.+.    ...+..++.
T Consensus        54 ~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~----~~~~y~E~d  117 (286)
T PF04321_consen   54 VVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGD----KGGPYTEDD  117 (286)
T ss_dssp             EEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SS----TSSSB-TTS
T ss_pred             eEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCC----cccccccCC
Confidence            99999997432  3455667788999999988888777543          5699999997665432    112244555


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +..+...|+.+|...|..++.    ..+ +  ..|  ++++++..+
T Consensus       118 ~~~P~~~YG~~K~~~E~~v~~----~~~-~--~~I--lR~~~~~g~  154 (286)
T PF04321_consen  118 PPNPLNVYGRSKLEGEQAVRA----ACP-N--ALI--LRTSWVYGP  154 (286)
T ss_dssp             ----SSHHHHHHHHHHHHHHH----H-S-S--EEE--EEE-SEESS
T ss_pred             CCCCCCHHHHHHHHHHHHHHH----hcC-C--EEE--Eecceeccc
Confidence            566678999999997766655    222 2  333  888888877

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=1.2e-12  Score=112.65  Aligned_cols=174  Identities=20%  Similarity=0.175  Sum_probs=98.4

Q ss_pred             EecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhC------------CCCceeEEEccCCCHH------
Q 023438           36 VTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI------------PSAKVDAMELDLSSLA------   95 (282)
Q Consensus        36 ItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~------------~~~~v~~~~~Dvs~~~------   95 (282)
                      ||||||+||.++.++|++.+.  +|++..|.... ....+++.+..            ...++.++.+|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999987  89999997643 12222221110            0458999999999853      


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +...+.+       .+|+|||||+......     .+.+..++|+.|+..+++.+..    .     +..+++++|| +.
T Consensus        80 ~~~~L~~-------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~----~-----~~~~~~~iST-a~  137 (249)
T PF07993_consen   80 DYQELAE-------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQ----G-----KRKRFHYIST-AY  137 (249)
T ss_dssp             HHHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTS----S-----S---EEEEEE-GG
T ss_pred             Hhhcccc-------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHh----c-----cCcceEEecc-cc
Confidence            4444444       4699999999654322     2334678899998777766652    1     2348999999 32


Q ss_pred             cccccC-Ccc-----ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccc
Q 023438          176 RLAYHE-GIR-----FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT  237 (282)
Q Consensus       176 ~~~~~~-~~~-----~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t  237 (282)
                      ..+... ...     ........+......|..||...|.+++..+.+.   |  +.+..++||.|-.
T Consensus       138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g--~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---G--LPVTIYRPGIIVG  200 (249)
T ss_dssp             GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH--------EEEEEE-EEE-
T ss_pred             ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---C--ceEEEEecCcccc
Confidence            222111 110     1111122233445689999999998888877653   4  5666799998876

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.44  E-value=2e-12  Score=114.98  Aligned_cols=188  Identities=16%  Similarity=0.084  Sum_probs=130.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++.+++||||+|++|++++++|.+.|  .++.++|..+.......+.... . ...+.++.+|+.+..++.+.+.    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~-~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-R-SGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-c-CCceeEEecchhhhhhhhhhcc----
Confidence            356899999999999999999999998  6899999776522222222211 1 3478999999999888888766    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         .. .++|+|....+  +.-..+-+..+++|+.|+.+++..+...-         -.++|++||......... +.+.
T Consensus        76 ---~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~gT~nvi~~c~~~~---------v~~lIYtSs~~Vvf~g~~-~~n~  139 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVP--DFVENDRDLAMRVNVNGTLNVIEACKELG---------VKRLIYTSSAYVVFGGEP-IING  139 (361)
T ss_pred             ---Cc-eEEEeccccCc--cccccchhhheeecchhHHHHHHHHHHhC---------CCEEEEecCceEEeCCee-cccC
Confidence               34 56677664322  22333567789999999888888887664         348999999877654332 2222


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      +...+.|......|+.||+-.+.++.....   ..+  ....+++|..|+.|.-+..
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~--l~T~aLR~~~IYGpgd~~~  191 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANG---SDD--LYTCALRPPGIYGPGDKRL  191 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcC---CCC--eeEEEEccccccCCCCccc
Confidence            222233333345899999987766665544   233  7778899999999986653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.43  E-value=7.7e-12  Score=121.90  Aligned_cols=177  Identities=21%  Similarity=0.135  Sum_probs=113.9

Q ss_pred             EEEEecCCChhHHHHHHHHH--HcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHH--HHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLA--LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV--RNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~--~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i--~~~~~~i~~~~  108 (282)
                      ++|||||+|+||.+++++|+  +.|++|++++|+...  ...+.+.......++.++.+|++|++..  ...++.+    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589999999996432  1122222222224688999999985310  1112222    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      .++|+|||+|+.....     ......+++|+.++..+++++...         +..++|++||...+.. ... .++..
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~~SS~~v~g~-~~~-~~~e~  139 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL---------QAATFHHVSSIAVAGD-YEG-VFRED  139 (657)
T ss_pred             cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc---------CCCeEEEEeccccccC-ccC-ccccc
Confidence            3789999999964321     123456788999987777665432         2458999999765421 111 11111


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ....+......|+.+|...+.+++.      ..|  +.+..++|+.+.++-
T Consensus       140 ~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~~  182 (657)
T PRK07201        140 DFDEGQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGDS  182 (657)
T ss_pred             cchhhcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeecC
Confidence            1111223345799999998877652      235  677779999998763

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.43  E-value=3.4e-12  Score=113.61  Aligned_cols=149  Identities=15%  Similarity=0.077  Sum_probs=103.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|.||.+++++|++.|++|++++|+.+....    +.    ...+.++.+|++|++++.++++       .+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            69999999999999999999999999999998654321    11    1257889999999998877665       579


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+++...       .+.....++|+.++..+++++...         +-.++|++||.....               
T Consensus        67 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~---------gvkr~I~~Ss~~~~~---------------  115 (317)
T CHL00194         67 AIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA---------KIKRFIFFSILNAEQ---------------  115 (317)
T ss_pred             EEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc---------CCCEEEEeccccccc---------------
Confidence            9999876321       122335677888877776666433         224899999853221               


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                        .+...|..+|...+.+.+       ..+  +.+..++|+.+..+
T Consensus       116 --~~~~~~~~~K~~~e~~l~-------~~~--l~~tilRp~~~~~~  150 (317)
T CHL00194        116 --YPYIPLMKLKSDIEQKLK-------KSG--IPYTIFRLAGFFQG  150 (317)
T ss_pred             --cCCChHHHHHHHHHHHHH-------HcC--CCeEEEeecHHhhh
Confidence              122457788887655442       235  55566888865433

>PLN02778 3,5-epimerase/4-reductase

Probab=99.41  E-value=1.4e-11  Score=108.71  Aligned_cols=142  Identities=15%  Similarity=0.098  Sum_probs=93.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|.++|++|++..                          .|+++.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence            6799999999999999999999999986431                          2455555555555432     68


Q ss_pred             cEEEEcCCCCCCC-CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc---ccC
Q 023438          112 NILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR---FDK  187 (282)
Q Consensus       112 d~vi~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~---~~~  187 (282)
                      |+|||+||..... .+...++....+++|+.++..+++++...          +.+.+++||...+... ...+   ..+
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----------gv~~v~~sS~~vy~~~-~~~p~~~~~~  127 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----------GLVLTNYATGCIFEYD-DAHPLGSGIG  127 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCCEEEEecceEeCCC-CCCCcccCCC
Confidence            9999999976432 12233566788999999999988887543          1235555554332110 1111   011


Q ss_pred             CCCCC-CCCCCccchHhHHHHHHHHHHHH
Q 023438          188 INDPS-GYNGFRAYSQSKLANILHANELA  215 (282)
Q Consensus       188 ~~~~~-~~~~~~~y~asK~a~~~~~~~la  215 (282)
                      +.++. +.+....|+.+|.+.+.+++.++
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            33222 33344689999999998887764

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=1.8e-11  Score=105.40  Aligned_cols=137  Identities=23%  Similarity=0.268  Sum_probs=110.4

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      +||||++|-+|.++++.|. .+++|+.++|..                       +|++|++.+.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 778999887652                       7999999999999987     8999


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCC
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  193 (282)
                      |||+|++..  .|..+.+.++.+.+|..++.++++++...          +..+|++|+-..+.+.-    -.+..+.+.
T Consensus        54 VIn~AAyt~--vD~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~----~~~Y~E~D~  117 (281)
T COG1091          54 VINAAAYTA--VDKAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEK----GGPYKETDT  117 (281)
T ss_pred             EEECccccc--cccccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCC----CCCCCCCCC
Confidence            999999754  34566667889999999999999888655          56899999976655421    122445556


Q ss_pred             CCCCccchHhHHHHHHHHHHHH
Q 023438          194 YNGFRAYSQSKLANILHANELA  215 (282)
Q Consensus       194 ~~~~~~y~asK~a~~~~~~~la  215 (282)
                      ..+...|+.||.+.+..++...
T Consensus       118 ~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         118 PNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             CCChhhhhHHHHHHHHHHHHhC
Confidence            6778899999999877766553

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.35  E-value=8.3e-11  Score=96.05  Aligned_cols=152  Identities=26%  Similarity=0.270  Sum_probs=105.3

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      |+|+||+|.+|+.++++|+++|++|+++.|+.++.++          ..++.++.+|+.|++++.+.++       +.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999887555          2379999999999988887766       6799


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCC
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  193 (282)
                      +|+++|....       +            ...++.++..+++.     +..+++++|+...........      ....
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~~~------~~~~  113 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPGLF------SDED  113 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTSEE------EGGT
T ss_pred             hhhhhhhhcc-------c------------cccccccccccccc-----ccccceeeeccccCCCCCccc------cccc
Confidence            9999974322       1            33456666666664     356999999876543211100      0001


Q ss_pred             CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          194 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       194 ~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+.+..|...|...+.+.       ...+  ++...++|+.+..+...
T Consensus       114 ~~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~  152 (183)
T PF13460_consen  114 KPIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSR  152 (183)
T ss_dssp             CGGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSS
T ss_pred             ccchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCc
Confidence            112235566655443322       2335  77778999999877633

...

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.33  E-value=2.3e-10  Score=89.26  Aligned_cols=182  Identities=14%  Similarity=0.100  Sum_probs=129.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC-
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~-  108 (282)
                      +-.+++|.||-|.+|.+|++.|.+.+|-|.-++-++..          +  ...-..+..|-+=.|+-+.+++++.... 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe----------~--Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE----------Q--ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc----------c--ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            45789999999999999999999999998888765432          0  1122334455554566666777766543 


Q ss_pred             -CCccEEEEcCCCCCCCCcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 -HQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 -g~id~vi~~ag~~~~~~~~---~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                       .++|.|+|-||....-...   -.++.+.++...+...-...+....+|+.        |-++.++.......      
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--------GGLL~LtGAkaAl~------  135 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--------GGLLQLTGAKAALG------  135 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--------CceeeecccccccC------
Confidence             4799999999854221111   12445667888888877777777777753        44555555444442      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCch
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL  245 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~  245 (282)
                              +.|+...|+.+|+|+.+++++|+.+-..-..+-.+.+|-|-.++|||.+.+.+
T Consensus       136 --------gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP  188 (236)
T KOG4022|consen  136 --------GTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP  188 (236)
T ss_pred             --------CCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence                    78999999999999999999999875432222677889999999999987643

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.32  E-value=3.8e-11  Score=101.65  Aligned_cols=188  Identities=14%  Similarity=0.082  Sum_probs=126.8

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .....+..+.+++||||+|+||+++|++|..+|+.||++|.-........+.+..   ...+..+..|+..+     ++.
T Consensus        19 ~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~p-----l~~   90 (350)
T KOG1429|consen   19 REQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEP-----LLK   90 (350)
T ss_pred             hhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhH-----HHH
Confidence            3345667889999999999999999999999999999998765554444443322   23566677777654     444


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .       +|-|+|.|....+..-  .....+.+.+|+.+++.++..+.+.          +.|++..|++-. ++....
T Consensus        91 e-------vD~IyhLAapasp~~y--~~npvktIktN~igtln~lglakrv----------~aR~l~aSTseV-Ygdp~~  150 (350)
T KOG1429|consen   91 E-------VDQIYHLAAPASPPHY--KYNPVKTIKTNVIGTLNMLGLAKRV----------GARFLLASTSEV-YGDPLV  150 (350)
T ss_pred             H-------hhhhhhhccCCCCccc--ccCccceeeecchhhHHHHHHHHHh----------CceEEEeecccc-cCCccc
Confidence            3       4667888886554321  1223456888999999988776554          357888887544 343333


Q ss_pred             ccccCCCC--CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKIND--PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~--~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      ++.....+  -.+....+.|.-.|...+.++..+..+   .|  |.+...++..+..|.+.-.
T Consensus       151 hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~g--iE~rIaRifNtyGPrm~~~  208 (350)
T KOG1429|consen  151 HPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EG--IEVRIARIFNTYGPRMHMD  208 (350)
T ss_pred             CCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cC--cEEEEEeeecccCCccccC
Confidence            33322222  234556788999999977777666555   45  4444488889999887644

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.29  E-value=2.3e-10  Score=111.85  Aligned_cols=156  Identities=14%  Similarity=0.069  Sum_probs=104.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ..+++|||||+|.||++++++|.+.|++|.+.                          ..|++|.+.+...++..     
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----
Confidence            34589999999999999999999999887311                          13678888887777654     


Q ss_pred             CccEEEEcCCCCCCC-CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc-c-cc
Q 023438          110 QLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-R-FD  186 (282)
Q Consensus       110 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~-~~  186 (282)
                      ++|+|||+|+..... .+...++....+++|+.++..+++++...          +.+++++||...+....... . -.
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~  497 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGI  497 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCC
Confidence            789999999976432 33445667788999999999999888653          23566776644332110000 0 01


Q ss_pred             CCCCCC-CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 023438          187 KINDPS-GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH  231 (282)
Q Consensus       187 ~~~~~~-~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~  231 (282)
                      ++.++. +.+....|+.+|.+.+.+++.+...   ..  +|+..+.
T Consensus       498 p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~--~r~~~~~  538 (668)
T PLN02260        498 GFKEEDKPNFTGSFYSKTKAMVEELLREYDNV---CT--LRVRMPI  538 (668)
T ss_pred             CCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh---eE--EEEEEec
Confidence            233332 3334478999999999888776421   23  5555555

>PRK05865 hypothetical protein; Provisional

Probab=99.29  E-value=1e-10  Score=115.03  Aligned_cols=131  Identities=21%  Similarity=0.161  Sum_probs=98.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||.+++++|++.|++|++++|+....      +     ...+.++.+|++|.+++..+++       ++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            699999999999999999999999999999874321      1     1247789999999998888775       479


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....           .+++|+.++..+++++    .+.     +.++||++||.                   
T Consensus        64 ~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa----~~~-----gvkr~V~iSS~-------------------  104 (854)
T PRK05865         64 VVAHCAWVRGR-----------NDHINIDGTANVLKAM----AET-----GTGRIVFTSSG-------------------  104 (854)
T ss_pred             EEEECCCcccc-----------hHHHHHHHHHHHHHHH----HHc-----CCCeEEEECCc-------------------
Confidence            99999985321           3678999977766554    332     24589999982                   


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                       .         |.+.+.+++    +   .+  +.+..++|+.++.|-
T Consensus       105 -~---------K~aaE~ll~----~---~g--l~~vILRp~~VYGP~  132 (854)
T PRK05865        105 -H---------QPRVEQMLA----D---CG--LEWVAVRCALIFGRN  132 (854)
T ss_pred             -H---------HHHHHHHHH----H---cC--CCEEEEEeceEeCCC
Confidence             1         777665443    2   35  666779999988874

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.28  E-value=3.8e-10  Score=98.07  Aligned_cols=183  Identities=20%  Similarity=0.158  Sum_probs=139.1

Q ss_pred             CCEEEEecC-CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~-s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ...|+|.|. +.-|++.+|..|-++||-|+++..+.+.....    +++. ...+..+..|..++.++...+.+......
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~v----e~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYV----ESED-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHH----Hhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468899995 79999999999999999999999886653332    2222 23577888888777776666666554322


Q ss_pred             --------------CccEEEEcCCC---CCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEc-
Q 023438          110 --------------QLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS-  171 (282)
Q Consensus       110 --------------~id~vi~~ag~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vs-  171 (282)
                                    .+..||.....   .++...++.+.|.+.++.|+..++.+++.++|+++.+.   .++.+||+++ 
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~---~~~~~iil~~P  154 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS---NQKSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCceEEEEeC
Confidence                          34555554442   24466889999999999999999999999999999842   1355666665 


Q ss_pred             CCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      |.....               ..|..+.-.....++.+|.+.|++|+.+.+  |.|..|.-|.++-.
T Consensus       155 si~ssl---------------~~PfhspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSL---------------NPPFHSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhcc---------------CCCccCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            433333               477788889999999999999999999888  88889999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.26  E-value=3.5e-10  Score=107.87  Aligned_cols=128  Identities=12%  Similarity=0.101  Sum_probs=88.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhh--HHHHH-HH---------HHHhCC-------CCceeE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAA--GKDVK-ET---------IVKEIP-------SAKVDA   86 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~--~~~~~-~~---------l~~~~~-------~~~v~~   86 (282)
                      ++|++++||||+|+||+.++++|++.+.   +|++..|....  ..+.. ++         +++..+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5899999999999999999999998764   67888885432  11111 12         222222       246899


Q ss_pred             EEccCCCHH------HHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 023438           87 MELDLSSLA------SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK  160 (282)
Q Consensus        87 ~~~Dvs~~~------~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~  160 (282)
                      +.+|+++++      ..+.+.+       .+|+|||+|+....     .++.+..+++|+.++..+++.+...-      
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~------  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK------  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC------
Confidence            999999873      3333332       58999999996532     13467789999999888887765431      


Q ss_pred             CCCCCeEEEEcCCccc
Q 023438          161 SGGEGRIINVSSEGHR  176 (282)
Q Consensus       161 ~~~~g~iv~vsS~~~~  176 (282)
                        +-.++|++||...+
T Consensus       259 --~lk~fV~vSTayVy  272 (605)
T PLN02503        259 --KLKLFLQVSTAYVN  272 (605)
T ss_pred             --CCCeEEEccCceee
Confidence              12478998886543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.26  E-value=8.4e-11  Score=102.90  Aligned_cols=169  Identities=14%  Similarity=0.033  Sum_probs=95.0

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      +|||||+|+||.+++++|++.|++|++++|+........        .  ..  ..|+.. ...       .....++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cch-------hhhcCCCCE
Confidence            589999999999999999999999999999876532110        0  00  112222 111       122347899


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCC
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  193 (282)
                      |||+||........+.+.....+++|+.++..+++++...-        .+..+++.+|..+.++...+   .++.++.+
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--------~~~~~~i~~S~~~~yg~~~~---~~~~E~~~  129 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE--------QKPKVFISASAVGYYGTSED---RVFTEEDS  129 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC--------CCceEEEEeeeEEEeCCCCC---CCcCcccC
Confidence            99999964322223444556778889998777666664321        11233333333333322111   12333332


Q ss_pred             CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          194 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       194 ~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ......|+..+...+....    .+...+  +.+..++|+.+..|-
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~--~~~~ilR~~~v~G~~  169 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLG--TRVVLLRTGIVLGPK  169 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcC--CceEEEeeeeEECCC
Confidence            2222233333433332222    223345  777889999998874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.23  E-value=5.1e-10  Score=98.97  Aligned_cols=180  Identities=22%  Similarity=0.250  Sum_probs=113.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChh---hHHHHHHHHH-----HhCCCCceeEEEccCCCH------HH
Q 023438           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIA---AGKDVKETIV-----KEIPSAKVDAMELDLSSL------AS   96 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~---~~~~~~~~l~-----~~~~~~~v~~~~~Dvs~~------~~   96 (282)
                      +++++|||||++|..+..+|+.. -++|++..|-+.   ..+.+.+.+.     ++....++..+.+|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999998864 469998887654   1222222222     111256899999999943      44


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438           97 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      ++++.+       .+|.||||++..+-..  +   ..+....|+.|+..+++.+...         +...+.++||.+..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~--p---Ys~L~~~NVlGT~evlrLa~~g---------k~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF--P---YSELRGANVLGTAEVLRLAATG---------KPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC--c---HHHhcCcchHhHHHHHHHHhcC---------CCceeEEEeeeeec
Confidence            555555       5799999999654321  2   3445778999977777655322         23359999997754


Q ss_pred             cccc-C--CccccCC--CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          177 LAYH-E--GIRFDKI--NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       177 ~~~~-~--~~~~~~~--~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      ...+ .  ...++..  .-.........|+-||.+.|.+    .++-...|  +++..++||+|-.+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~L----vr~A~~rG--Lpv~I~Rpg~I~gd  200 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL----VREAGDRG--LPVTIFRPGYITGD  200 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHH----HHHHhhcC--CCeEEEecCeeecc
Confidence            4321 1  1111100  1123334457899999995554    45555557  56666999999544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.14  E-value=2.3e-10  Score=97.05  Aligned_cols=182  Identities=16%  Similarity=0.125  Sum_probs=130.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHH--hCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK--EIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~--~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +|++||||-+|--|.-+|+.|+++||.|.-+.|.........-.+.+  ...+.++..+.+|++|...+.++++.+    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999888764332111001111  111345889999999999999999998    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|-|.|.|+...  ...+.+......+++-.|++.++.+..-+-.       .+.++..-||+- ..   +...-.|.
T Consensus        78 -~PdEIYNLaAQS~--V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~-------~~~rfYQAStSE-~f---G~v~~~pq  143 (345)
T COG1089          78 -QPDEIYNLAAQSH--VGVSFEQPEYTADVDAIGTLRLLEAIRILGE-------KKTRFYQASTSE-LY---GLVQEIPQ  143 (345)
T ss_pred             -Cchhheecccccc--ccccccCcceeeeechhHHHHHHHHHHHhCC-------cccEEEecccHH-hh---cCcccCcc
Confidence             8899888888532  3346666777788899998888877654432       245777766632 22   22333456


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc---CCCcEEEEEeeC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKE---DGVDITANSVHP  232 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~---~g~~i~v~~v~P  232 (282)
                      .+..|..+.++|+++|....-++..++..+.-   .|  |-+|+=+|
T Consensus       144 ~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnG--ILFNHESP  188 (345)
T COG1089         144 KETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNG--ILFNHESP  188 (345)
T ss_pred             ccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecc--eeecCCCC
Confidence            67788999999999999988888888877643   34  55555444

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.12  E-value=5.2e-09  Score=110.17  Aligned_cols=181  Identities=21%  Similarity=0.188  Sum_probs=114.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcC----CEEEEEEcChhhHHHHHHHHHH---hCC------CCceeEEEccCCCH---
Q 023438           31 GLTAIVTGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVK---EIP------SAKVDAMELDLSSL---   94 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G----~~Vii~~r~~~~~~~~~~~l~~---~~~------~~~v~~~~~Dvs~~---   94 (282)
                      .++++||||+|+||.+++++|++.|    ++|+...|+...... .+.+.+   .+.      ..++.++.+|++++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5799999999999999999999987    789988887543221 222211   110      13688999999864   


Q ss_pred             ---HHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEc
Q 023438           95 ---ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (282)
Q Consensus        95 ---~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vs  171 (282)
                         +....+.       ..+|+|||||+.....  ..   +......|+.++..+++.+...         +..+++++|
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~~--~~---~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~vS 1108 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHWV--YP---YSKLRDANVIGTINVLNLCAEG---------KAKQFSFVS 1108 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecCc--cC---HHHHHHhHHHHHHHHHHHHHhC---------CCceEEEEe
Confidence               2233322       2689999999965321  12   3334567999988888766322         234899999


Q ss_pred             CCcccccccC-------------CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          172 SEGHRLAYHE-------------GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       172 S~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      |.+.+.....             .++.+.............|+.+|.+.+.++..+..    .|  +.+..++||.|..+
T Consensus      1109 S~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g--~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1109 STSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RG--LRGCIVRPGYVTGD 1182 (1389)
T ss_pred             CeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CC--CCEEEECCCccccC
Confidence            9765421100             01000000011112235699999998888776432    36  77788999999876


Q ss_pred             c
Q 023438          239 I  239 (282)
Q Consensus       239 ~  239 (282)
                      .
T Consensus      1183 ~ 1183 (1389)
T TIGR03443      1183 S 1183 (1389)
T ss_pred             C
Confidence            4

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.10  E-value=3.9e-10  Score=95.56  Aligned_cols=187  Identities=14%  Similarity=0.047  Sum_probs=129.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +.+.++||||.|+||...+..++..  .++.+.++.-.--..  .+.+.+.....+..++..|+.+...+..++..    
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc----
Confidence            3389999999999999999999975  355555542111001  22222222245788999999998877776654    


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                       .++|.|+|.|...+.  +.+.-+....+..|++++..++........        -.++|.+|+-..+....    -+.
T Consensus        79 -~~id~vihfaa~t~v--d~s~~~~~~~~~nnil~t~~Lle~~~~sg~--------i~~fvhvSTdeVYGds~----~~~  143 (331)
T KOG0747|consen   79 -EEIDTVIHFAAQTHV--DRSFGDSFEFTKNNILSTHVLLEAVRVSGN--------IRRFVHVSTDEVYGDSD----EDA  143 (331)
T ss_pred             -CchhhhhhhHhhhhh--hhhcCchHHHhcCCchhhhhHHHHHHhccC--------eeEEEEecccceecCcc----ccc
Confidence             489999999986432  223333345578899998888877766643        34899999966553211    112


Q ss_pred             CC-CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 IN-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~-~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .. +.+...+-.+|+++|+|.+++.+++.+.++     +-|..++-+.|++|-.-+
T Consensus       144 ~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~  194 (331)
T KOG0747|consen  144 VVGEASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYP  194 (331)
T ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcCh
Confidence            22 556667788999999999999999998875     666778888888886443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.09  E-value=1.5e-09  Score=88.40  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=70.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+ |+|.+++++|++.|++|++++|+.+..+.....+..   ..++.++.+|++|++++.++++.+...++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 677779999999999999999998776655544422   34688899999999999999999988889999


Q ss_pred             EEEEcCCC
Q 023438          113 ILINNAGI  120 (282)
Q Consensus       113 ~vi~~ag~  120 (282)
                      ++|+.+-.
T Consensus        78 ~lv~~vh~   85 (177)
T PRK08309         78 LAVAWIHS   85 (177)
T ss_pred             EEEEeccc
Confidence            99988764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.06  E-value=5.8e-10  Score=94.47  Aligned_cols=100  Identities=14%  Similarity=0.216  Sum_probs=75.2

Q ss_pred             CEEEEecC-CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~-s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+=.||.. |||||+++|++|++.|++|+++++...        +..   .   ....+|+++.++++.+++.+.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~---~~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---E---PHPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---c---cCCcceeecHHHHHHHHHHHHHHcCC
Confidence            44567765 689999999999999999999876311        100   0   12458999999999999999999999


Q ss_pred             ccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHH
Q 023438          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN  148 (282)
Q Consensus       111 id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~  148 (282)
                      +|++|||||+.  .+..+.+.++|+++.   ..+.+++.+
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~  117 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQ  117 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhhc---chhhhhccc
Confidence            99999999964  345667888887663   445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=98.98  E-value=1.2e-08  Score=93.04  Aligned_cols=158  Identities=17%  Similarity=0.129  Sum_probs=95.0

Q ss_pred             CCCEEEEe----cCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHH----HHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           30 SGLTAIVT----GATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE----TIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        30 ~~~~~lIt----G~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~----~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ..+++|||    ||+|.||.+++++|++.|++|++++|+.........    .+.+ .....+.++.+|+.|   +..++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE-LSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhH-hhhcCceEEEecHHH---HHhhh
Confidence            44789999    999999999999999999999999998754322110    0101 111247888889876   33333


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      .     ...+|+|||+++..                  ..+    ++.++..+++.     +-.++|++||...+.. ..
T Consensus       127 ~-----~~~~d~Vi~~~~~~------------------~~~----~~~ll~aa~~~-----gvkr~V~~SS~~vyg~-~~  173 (378)
T PLN00016        127 A-----GAGFDVVYDNNGKD------------------LDE----VEPVADWAKSP-----GLKQFLFCSSAGVYKK-SD  173 (378)
T ss_pred             c-----cCCccEEEeCCCCC------------------HHH----HHHHHHHHHHc-----CCCEEEEEccHhhcCC-CC
Confidence            1     13689999997621                  011    23334444442     2358999999754321 11


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .   .+..+..+...   +. +|...+.+.+       ..+  +.+..++|+.+..|..
T Consensus       174 ~---~p~~E~~~~~p---~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~  216 (378)
T PLN00016        174 E---PPHVEGDAVKP---KA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGN  216 (378)
T ss_pred             C---CCCCCCCcCCC---cc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCC
Confidence            1   11122222211   12 6877665432       235  6777799999998864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.89  E-value=3.3e-08  Score=86.49  Aligned_cols=76  Identities=17%  Similarity=0.166  Sum_probs=60.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC-c
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ-L  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~-i  111 (282)
                      +++||||||.||.+++++|++.|++|.+++|+.+...           ...+..+.+|+.|++++..+++... .... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~-~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDD-GMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhccc-CcCCce
Confidence            4899999999999999999999999999999976431           1135567789999999999886532 2234 8


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999998873

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.87  E-value=1.7e-08  Score=85.69  Aligned_cols=163  Identities=12%  Similarity=0.084  Sum_probs=97.2

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      ++||||+|.||++++.+|.+.|++|+++.|+....+...        ...       +...+.+....+      ..+|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~-------v~~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPN-------VTLWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccc-------ccccchhhhccc------CCCCE
Confidence            589999999999999999999999999999976533221        111       111222222222      16999


Q ss_pred             EEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCC
Q 023438          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (282)
Q Consensus       114 vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  193 (282)
                      |||.||..-...-.+.+.=+..    ..|.+..++.+.....+..    .++++.+-+|+.|+++.-.+-   .++++.+
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i----~~SRi~~T~~L~e~I~~~~----~~P~~~isaSAvGyYG~~~~~---~~tE~~~  128 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEI----RQSRINTTEKLVELIAASE----TKPKVLISASAVGYYGHSGDR---VVTEESP  128 (297)
T ss_pred             EEECCCCccccccCCHHHHHHH----HHHHhHHHHHHHHHHHhcc----CCCcEEEecceEEEecCCCce---eeecCCC
Confidence            9999995311111233322222    3466667888888877542    456777777777777533221   1333322


Q ss_pred             CCCCccchHhHHHHHHHHHHHHHHh---ccCCCcEEEEEeeCCccccC
Q 023438          194 YNGFRAYSQSKLANILHANELARRL---KEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       194 ~~~~~~y~asK~a~~~~~~~la~e~---~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      ..        .-.+..+|+.|-.+.   ...|  +||..++-|.|-.+
T Consensus       129 ~g--------~~Fla~lc~~WE~~a~~a~~~g--tRvvllRtGvVLs~  166 (297)
T COG1090         129 PG--------DDFLAQLCQDWEEEALQAQQLG--TRVVLLRTGVVLSP  166 (297)
T ss_pred             CC--------CChHHHHHHHHHHHHhhhhhcC--ceEEEEEEEEEecC
Confidence            11        223334555555543   3345  89988988888654

>PRK12320 hypothetical protein; Provisional

Probab=98.84  E-value=4.9e-08  Score=94.49  Aligned_cols=102  Identities=20%  Similarity=0.194  Sum_probs=75.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||++++++|.+.|++|++++|....       .  .  ...+.++.+|+++.. +.++++       .+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~--~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--L--DPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--c--cCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            69999999999999999999999999999986432       0  1  235788999999873 433332       579


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +|||+|+....      +    ...+|+.++.++++++.    +.      +.++|++||.
T Consensus        63 ~VIHLAa~~~~------~----~~~vNv~Gt~nLleAA~----~~------GvRiV~~SS~  103 (699)
T PRK12320         63 AVIHLAPVDTS------A----PGGVGITGLAHVANAAA----RA------GARLLFVSQA  103 (699)
T ss_pred             EEEEcCccCcc------c----hhhHHHHHHHHHHHHHH----Hc------CCeEEEEECC
Confidence            99999985311      1    12478888887777663    22      3479999885

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.82  E-value=1.6e-08  Score=92.38  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEcc
Q 023438           27 IDGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD   90 (282)
Q Consensus        27 ~~~~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~D   90 (282)
                      .+++||+++||||                ||++|.++|++|+++|++|++++++... .         .+.   ....+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~---------~~~---~~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P---------TPA---GVKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c---------CCC---CcEEEc
Confidence            3579999999999                5559999999999999999999987521 1         111   134579


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           91 LSSLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        91 vs~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      +++.+++.+.++   +.++++|++|||||+.
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            998888766655   4578899999999974

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=6.7e-08  Score=84.94  Aligned_cols=84  Identities=21%  Similarity=0.220  Sum_probs=65.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcCh---hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++.+..  ..+....+|+++.+++...++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence            468899999999 69999999999999995 99999997   56677766665443  245556788888776665444 


Q ss_pred             HHhcCCCccEEEEcCCCC
Q 023438          104 YNIQHHQLNILINNAGIM  121 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~  121 (282)
                            ..|+||||..+.
T Consensus       199 ------~~DilINaTp~G  210 (289)
T PRK12548        199 ------SSDILVNATLVG  210 (289)
T ss_pred             ------cCCEEEEeCCCC
Confidence                  459999998753

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.71  E-value=1.9e-07  Score=77.30  Aligned_cols=85  Identities=22%  Similarity=0.293  Sum_probs=67.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++++++|+||+|++|+++++.|++.|++|++++|+.++++...+++.+.+   ......+|..+.+++.+.++   
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~---   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK---   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh---
Confidence            357889999999999999999999999999999999999888888777765433   23445678888887776664   


Q ss_pred             hcCCCccEEEEcCCC
Q 023438          106 IQHHQLNILINNAGI  120 (282)
Q Consensus       106 ~~~g~id~vi~~ag~  120 (282)
                          +.|+||++.+.
T Consensus        97 ----~~diVi~at~~  107 (194)
T cd01078          97 ----GADVVFAAGAA  107 (194)
T ss_pred             ----cCCEEEECCCC
Confidence                46888887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.66  E-value=1.9e-06  Score=80.39  Aligned_cols=197  Identities=17%  Similarity=0.136  Sum_probs=125.5

Q ss_pred             CCCCCCCCEEEEecCC-ChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhC--CCCceeEEEccCCCHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s-~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      ...+..++.++||||+ +.||.+++..|++-|+.||+... -.+...+..+.+-..+  ++..+..+.++.++..+++.+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            3466789999999998 78999999999999999998754 3445556666665544  356788889999999999999


Q ss_pred             HHHHHhcCC--------------CccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--C
Q 023438          101 ASEYNIQHH--------------QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS--G  162 (282)
Q Consensus       101 ~~~i~~~~g--------------~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~--~  162 (282)
                      ++-|..+..              .+|+++=-|...  +.+.+.... -+..+++-+++...++-    -+.+...+.  .
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rlig----gl~~~~s~r~v~  544 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIG----GLKKQGSSRGVD  544 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHH----HhhhhccccCcc
Confidence            999976432              356666555532  222222221 12233444444333333    233321111  1


Q ss_pred             CCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCccc-cCc
Q 023438          163 GEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRL--KEDGVDITANSVHPGAIA-TNI  239 (282)
Q Consensus       163 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~--~~~g~~i~v~~v~Pg~v~-t~~  239 (282)
                      .+-+||.-.|--.-                .+.+-..|+-+|++++.++.-|.-|-  +.+   +.+..-..|++. |.+
T Consensus       545 ~R~hVVLPgSPNrG----------------~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~---vsl~~A~IGWtrGTGL  605 (866)
T COG4982         545 TRLHVVLPGSPNRG----------------MFGGDGAYGESKLALDAVVNRWHSESSWAAR---VSLAHALIGWTRGTGL  605 (866)
T ss_pred             cceEEEecCCCCCC----------------ccCCCcchhhHHHHHHHHHHHhhccchhhHH---HHHhhhheeeeccccc
Confidence            23456666662110                24567899999999999887776653  332   555555678885 777


Q ss_pred             cccCch
Q 023438          240 IRHNSL  245 (282)
Q Consensus       240 ~~~~~~  245 (282)
                      |-.++.
T Consensus       606 Mg~Ndi  611 (866)
T COG4982         606 MGHNDI  611 (866)
T ss_pred             cCCcch
Confidence            776654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.62  E-value=7.4e-07  Score=81.89  Aligned_cols=129  Identities=22%  Similarity=0.263  Sum_probs=90.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcC--C-EEEEEEcChhh--H---------HHHHHHHHHhCCC--CceeEEEccC
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRG--V-HVVMGVRDIAA--G---------KDVKETIVKEIPS--AKVDAMELDL   91 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G--~-~Vii~~r~~~~--~---------~~~~~~l~~~~~~--~~v~~~~~Dv   91 (282)
                      .++||+++||||+|++|+-+.++|+..-  . ++++.-|....  .         +++.+.+++..|.  .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            4789999999999999999999999753  2 67777655331  1         2233334444332  5788899999


Q ss_pred             CCHH------HHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 023438           92 SSLA------SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG  165 (282)
Q Consensus        92 s~~~------~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g  165 (282)
                      ++++      +...+.+       .+|+|||+|+..+.     .+.++..+.+|..|+..+.+.+.....-.        
T Consensus        89 ~~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l~--------  148 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLAD-------EVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKLK--------  148 (467)
T ss_pred             cCcccCCChHHHHHHHh-------cCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhhh--------
Confidence            8754      3332222       68999999996442     23455678999999999998887775543        


Q ss_pred             eEEEEcCCccc
Q 023438          166 RIINVSSEGHR  176 (282)
Q Consensus       166 ~iv~vsS~~~~  176 (282)
                      .++.+|++...
T Consensus       149 ~~vhVSTAy~n  159 (467)
T KOG1221|consen  149 ALVHVSTAYSN  159 (467)
T ss_pred             eEEEeehhhee
Confidence            78888876544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.62  E-value=1.3e-06  Score=74.15  Aligned_cols=75  Identities=23%  Similarity=0.239  Sum_probs=59.0

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      |+|+||+|.+|+.+++.|.+.|++|.++.|+...  +..+++...    .+..+.+|+.|.+++.+.++       ..|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999999732  233344432    35677999999998888877       6789


Q ss_pred             EEEcCCCC
Q 023438          114 LINNAGIM  121 (282)
Q Consensus       114 vi~~ag~~  121 (282)
                      ++++.+..
T Consensus        68 v~~~~~~~   75 (233)
T PF05368_consen   68 VFSVTPPS   75 (233)
T ss_dssp             EEEESSCS
T ss_pred             EEeecCcc
Confidence            99888754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.58  E-value=5.1e-07  Score=84.31  Aligned_cols=123  Identities=16%  Similarity=0.112  Sum_probs=83.0

Q ss_pred             EecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEEE
Q 023438           36 VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILI  115 (282)
Q Consensus        36 ItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi  115 (282)
                      |+||++|+|.++++.|...|++|+...+.....                                   ......+++.++
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-----------------------------------~~~~~~~~~~~~   87 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-----------------------------------AAGWGDRFGALV   87 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc-----------------------------------ccCcCCcccEEE
Confidence            788889999999999999999999876543310                                   000011334333


Q ss_pred             EcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCC
Q 023438          116 NNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYN  195 (282)
Q Consensus       116 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  195 (282)
                      +-+...     .+.++        +.+.+.+++..++.|..       .++||+++|..+.                  .
T Consensus        88 ~d~~~~-----~~~~~--------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~------------------~  129 (450)
T PRK08261         88 FDATGI-----TDPAD--------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEA------------------A  129 (450)
T ss_pred             EECCCC-----CCHHH--------HHHHHHHHHHHHHhccC-------CCEEEEEcccccc------------------C
Confidence            322210     01122        22334566666777653       5799999996542                  2


Q ss_pred             CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc
Q 023438          196 GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA  234 (282)
Q Consensus       196 ~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~  234 (282)
                      ....|+++|+++.+++++++.|+ ..+  +++++|.|+.
T Consensus       130 ~~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~  165 (450)
T PRK08261        130 ADPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP  165 (450)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC
Confidence            33469999999999999999999 677  9999999986

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.57  E-value=2.5e-07  Score=84.25  Aligned_cols=79  Identities=20%  Similarity=0.303  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecC---------------CCh-hHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC
Q 023438           28 DGSGLTAIVTGA---------------TSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (282)
Q Consensus        28 ~~~~~~~lItG~---------------s~g-IG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv   91 (282)
                      +++||+++||||               |+| +|.++|++|..+|++|+++++.....          . ...+  ..+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEe
Confidence            488999999999               666 99999999999999999988664321          1 1122  45799


Q ss_pred             CCHHHH-HHHHHHHHhcCCCccEEEEcCCCCC
Q 023438           92 SSLASV-RNFASEYNIQHHQLNILINNAGIMG  122 (282)
Q Consensus        92 s~~~~i-~~~~~~i~~~~g~id~vi~~ag~~~  122 (282)
                      ++.+++ +.+++.+   ++++|++|+|||+..
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccc
Confidence            998888 5555443   467999999999753

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.52  E-value=3.8e-07  Score=90.00  Aligned_cols=162  Identities=15%  Similarity=0.129  Sum_probs=127.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHH---HHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~---~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|..+|+||-||+|.++|..|.++|+ .+++.+|+.-+..   ...+.+.+.  +..|..-.-|++..+....++++. +
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s-~ 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEES-N 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHh-h
Confidence            58999999999999999999999999 5888899865543   345555555  666777777888888888888875 4


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +.+.+-.++|.|.+.+.  +.+.+++++.+.-+-.+.++.++-+.-..+-...       ..+|.+||.+--+       
T Consensus      1845 kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L-------dyFv~FSSvscGR------- 1910 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL-------DYFVVFSSVSCGR------- 1910 (2376)
T ss_pred             hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc-------ceEEEEEeecccC-------
Confidence            56788899999987644  6788999999999999999988777665554432       3678888855444       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHH
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARR  217 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e  217 (282)
                              +..++..|+-+..+++.+|+.-..+
T Consensus      1911 --------GN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1911 --------GNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             --------CCCcccccchhhHHHHHHHHHhhhc
Confidence                    5778999999999999999875554

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.46  E-value=1.7e-05  Score=63.63  Aligned_cols=163  Identities=19%  Similarity=0.206  Sum_probs=104.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      .+.|+||||-+|..|++++.++|++|..+.|+..++...          ..+..++.|+-|++++.+.+.       ..|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence            578999999999999999999999999999998764332          247788999999998866554       679


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||..-|...+    +.+..          .....+++...++..     ...|++.++.+++...++.       ..-.
T Consensus        65 aVIsA~~~~~~----~~~~~----------~~k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~g-------~rLv  118 (211)
T COG2910          65 AVISAFGAGAS----DNDEL----------HSKSIEALIEALKGA-----GVPRLLVVGGAGSLEIDEG-------TRLV  118 (211)
T ss_pred             eEEEeccCCCC----ChhHH----------HHHHHHHHHHHHhhc-----CCeeEEEEcCccceEEcCC-------ceee
Confidence            99998886422    11111          111155666666653     4579999998766543222       1111


Q ss_pred             CCCCCc-cchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          193 GYNGFR-AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       193 ~~~~~~-~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      ..|.++ .|-..-.+..-+.+.|..+-.     +.-.=|+|.....|.-+..
T Consensus       119 D~p~fP~ey~~~A~~~ae~L~~Lr~~~~-----l~WTfvSPaa~f~PGerTg  165 (211)
T COG2910         119 DTPDFPAEYKPEALAQAEFLDSLRAEKS-----LDWTFVSPAAFFEPGERTG  165 (211)
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhccC-----cceEEeCcHHhcCCccccC
Confidence            223332 354444444445555655533     3333488887776654443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.40  E-value=1.7e-06  Score=78.19  Aligned_cols=76  Identities=26%  Similarity=0.441  Sum_probs=65.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +.+||.|+ |+||+.+|..|++.| .+|++++|+.++..+..+..     ..++.++++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            67899999 999999999999999 79999999988866665543     33799999999999999888884       


Q ss_pred             ccEEEEcCCC
Q 023438          111 LNILINNAGI  120 (282)
Q Consensus       111 id~vi~~ag~  120 (282)
                      .|++|+++..
T Consensus        69 ~d~VIn~~p~   78 (389)
T COG1748          69 FDLVINAAPP   78 (389)
T ss_pred             CCEEEEeCCc
Confidence            4899999984

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.40  E-value=1.7e-06  Score=73.37  Aligned_cols=97  Identities=13%  Similarity=0.206  Sum_probs=62.6

Q ss_pred             CEEEEecCCC-hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATS-GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~-gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+-.||+.|+ +||.++|++|+++|++|++++|....        .. .+...+.++.++  .   .+.+.+.+.+.+++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~-~~~~~v~~i~v~--s---~~~m~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KP-EPHPNLSIIEIE--N---VDDLLETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cC-CCCCCeEEEEEe--c---HHHHHHHHHHHhcC
Confidence            3667887665 59999999999999999999876421        00 001235555532  2   22333333333457


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHH
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLG  142 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~  142 (282)
                      +|++|||||+..  +....+.+++..++++|...
T Consensus        82 ~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         82 HDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CCEEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence            899999999754  33445677788887776554

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.35  E-value=1.1e-05  Score=73.06  Aligned_cols=131  Identities=21%  Similarity=0.200  Sum_probs=82.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~  105 (282)
                      -.++-.+|+|+||+|++|+-+++.|.++|+.|....|+.+..++... +...  ......+..|.....+ +..+++.+ 
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~-  150 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAV-  150 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhc-
Confidence            34566899999999999999999999999999999999888777655 1111  1223334444444433 33333332 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                        .-...+++.++|......     +..--..+.+.++.++.+++.....         .++++++|..+..
T Consensus       151 --~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aGv---------k~~vlv~si~~~~  206 (411)
T KOG1203|consen  151 --PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAGV---------KRVVLVGSIGGTK  206 (411)
T ss_pred             --cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhCC---------ceEEEEEeecCcc
Confidence              112346666666432221     2222345667788888888844433         3899998866543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.33  E-value=2.4e-06  Score=75.00  Aligned_cols=83  Identities=16%  Similarity=0.200  Sum_probs=71.4

Q ss_pred             EEEEecCCChhHHHHHHHHHH----cCCEEEEEEcChhhHHHHHHHHHHhCCC--CceeEEEccCCCHHHHHHHHHHHHh
Q 023438           33 TAIVTGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~----~G~~Vii~~r~~~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      -++|.||||+.|.-+++++.+    .|..+.+.+||++++++.++.+.+..+.  .....+.||.+|++++.+++++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            489999999999999999999    7889999999999999999998776532  23347889999999999999965  


Q ss_pred             cCCCccEEEEcCCCCC
Q 023438          107 QHHQLNILINNAGIMG  122 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~  122 (282)
                           .+|+||+|.+.
T Consensus        85 -----~vivN~vGPyR   95 (423)
T KOG2733|consen   85 -----RVIVNCVGPYR   95 (423)
T ss_pred             -----EEEEeccccce
Confidence                 58999999653

>PRK09620 hypothetical protein; Provisional

Probab=98.31  E-value=8.7e-07  Score=75.05  Aligned_cols=82  Identities=17%  Similarity=0.187  Sum_probs=51.1

Q ss_pred             CCCCEEEEecCC----------------ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           29 GSGLTAIVTGAT----------------SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        29 ~~~~~~lItG~s----------------~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      |+||++|||+|.                |.+|.++|++|.++|++|+++++.......   .+   .....+..+..|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecHHH
Confidence            579999999886                999999999999999999988764221110   00   00122333333222


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      ..+.+.+++++     .++|+|||+|++.
T Consensus        75 ~~~~l~~~~~~-----~~~D~VIH~AAvs   98 (229)
T PRK09620         75 LQDKMKSIITH-----EKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHHhcc-----cCCCEEEECcccc
Confidence            22222222221     2689999999974

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.30  E-value=7.5e-06  Score=67.77  Aligned_cols=164  Identities=16%  Similarity=0.066  Sum_probs=101.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++|||++|=+|+||.+.+...|.   +.++.+..                       .+|+++..+.+.++++.    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence            6899999999999999999999886   34443321                       26999999999999986    


Q ss_pred             CCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC--Cccc
Q 023438          109 HQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~--~~~~  185 (282)
                       ++..|||.|+..+. ....+.  -.+.+..|+.=.-++++.+..+-.+         ++++..|..-+ .+.-  .++-
T Consensus        55 -kPthVIhlAAmVGGlf~N~~y--nldF~r~Nl~indNVlhsa~e~gv~---------K~vsclStCIf-Pdkt~yPIdE  121 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTY--NLDFIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCIF-PDKTSYPIDE  121 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCC--chHHHhhcceechhHHHHHHHhchh---------hhhhhcceeec-CCCCCCCCCH
Confidence             78889999985543 211111  1223445554444555555555333         34444442211 1000  0111


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ..+..-.+.|....|+-+|..+.-..++++.+++.     ...++-|-.+..|=.
T Consensus       122 tmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~-----~~tsviPtNvfGphD  171 (315)
T KOG1431|consen  122 TMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR-----DYTSVIPTNVFGPHD  171 (315)
T ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC-----ceeeeccccccCCCC
Confidence            12233345677778999997776666788887764     345577777776653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.28  E-value=9e-06  Score=63.22  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+++    ++..+.++..  .   ++...+.    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~--~---~~~~~~~----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL--E---DLEEALQ----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG--G---GHCHHHH----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH--H---HHHHHHh----
Confidence            688999999998 99999999999999995 999999999988887776    2233444433  2   2333333    


Q ss_pred             cCCCccEEEEcCCCCCC
Q 023438          107 QHHQLNILINNAGIMGT  123 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~  123 (282)
                         +.|+||++.+....
T Consensus        75 ---~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ---EADIVINATPSGMP   88 (135)
T ss_dssp             ---TESEEEE-SSTTST
T ss_pred             ---hCCeEEEecCCCCc
Confidence               67999999986433

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.27  E-value=2.9e-05  Score=67.07  Aligned_cols=74  Identities=27%  Similarity=0.311  Sum_probs=62.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +.++||||||.+|.+++++|.+.|++|.+..|+.+......         ..+.+...|+.++.++...++       ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence            36899999999999999999999999999999987755543         258889999999999888877       55


Q ss_pred             cEEEEcCCCC
Q 023438          112 NILINNAGIM  121 (282)
Q Consensus       112 d~vi~~ag~~  121 (282)
                      |.+++..+..
T Consensus        65 ~~~~~i~~~~   74 (275)
T COG0702          65 DGVLLISGLL   74 (275)
T ss_pred             cEEEEEeccc
Confidence            7777777643

>PLN00106 malate dehydrogenase

Probab=98.27  E-value=1.3e-05  Score=71.29  Aligned_cols=159  Identities=14%  Similarity=0.123  Sum_probs=96.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+++.|||++|.||.+++..|+..+.  +++++|.+.  ......++.....  ..  ...++++.+++...++      
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~l~------   85 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDDQLGDALK------   85 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCCCHHHHcC------
Confidence            36899999999999999999997775  799999877  2222223332211  11  2224433333333333      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc----cccccCCcc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH----RLAYHEGIR  184 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~----~~~~~~~~~  184 (282)
                       +.|+||++||....+ .   ..+++.+..|+..    ++.+.+.+.+..    ..+.|+++|.-.-    ...      
T Consensus        86 -~aDiVVitAG~~~~~-g---~~R~dll~~N~~i----~~~i~~~i~~~~----p~aivivvSNPvD~~~~i~t------  146 (323)
T PLN00106         86 -GADLVIIPAGVPRKP-G---MTRDDLFNINAGI----VKTLCEAVAKHC----PNALVNIISNPVNSTVPIAA------  146 (323)
T ss_pred             -CCCEEEEeCCCCCCC-C---CCHHHHHHHHHHH----HHHHHHHHHHHC----CCeEEEEeCCCccccHHHHH------
Confidence             789999999975442 1   2345556667666    555555555541    2334444444221    110      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKED  221 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~  221 (282)
                       ..+....+++....|+.++.-...|...++.++.-.
T Consensus       147 -~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        147 -EVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             -HHHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence             011234567778889999877777888888887644

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.23  E-value=6.1e-06  Score=75.54  Aligned_cols=76  Identities=28%  Similarity=0.462  Sum_probs=59.6

Q ss_pred             EEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           34 AIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+|.|| |.+|+.+++.|++.+-  +|++.+|+.++++...+++    ...++.++++|+.|.+++.++++       +.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999874  8999999999887777665    25589999999999999888877       44


Q ss_pred             cEEEEcCCCC
Q 023438          112 NILINNAGIM  121 (282)
Q Consensus       112 d~vi~~ag~~  121 (282)
                      |+||||+|.+
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999954

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.22  E-value=8.9e-06  Score=69.58  Aligned_cols=121  Identities=26%  Similarity=0.185  Sum_probs=86.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+|-++-|.||||++|+-++.+|++.|-.||+-.|-.+..-...+-+.+   -..+.++..|+.|+++|.++++.     
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~DedSIr~vvk~-----  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDEDSIRAVVKH-----  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHHHHHHHHHh-----
Confidence            4566888999999999999999999999999998865543322222222   24699999999999999999884     


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                        -++|||..|---.....+      .-++|+.++-.+++.+...-..         ++|.+|+..
T Consensus       131 --sNVVINLIGrd~eTknf~------f~Dvn~~~aerlAricke~GVe---------rfIhvS~Lg  179 (391)
T KOG2865|consen  131 --SNVVINLIGRDYETKNFS------FEDVNVHIAERLARICKEAGVE---------RFIHVSCLG  179 (391)
T ss_pred             --CcEEEEeeccccccCCcc------cccccchHHHHHHHHHHhhChh---------heeehhhcc
Confidence              479999998421111112      2456777766666666555433         788888854

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.17  E-value=9e-06  Score=75.92  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=58.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|+++|+|+++ +|.++|+.|++.|++|.+++++. +..++..+++.+.    .+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh------------
Confidence            57899999999877 99999999999999999999875 3344444444322    356777787751            


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                      ..+.+|+||+++|..
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            124789999999963

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.14  E-value=8.9e-05  Score=65.97  Aligned_cols=162  Identities=14%  Similarity=0.085  Sum_probs=93.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++.+++.|+|++|.||.+++..|+..+  .+++++|++  .......++.....  .  ....+.+|+.++.+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT--P--AKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc--C--ceEEEecCCCchHHHhC----
Confidence            456799999999999999999999666  489999983  22222223333211  1  22335555443333322    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc-cccccCCccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAYHEGIRF  185 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~~  185 (282)
                         +.|+||+++|.....    .+.+.+.+..|+..    ++...+.+.+.     +..++|+++|-.. .+...   .+
T Consensus        76 ---gaDvVVitaG~~~~~----~~tR~dll~~N~~i----~~~i~~~i~~~-----~~~~iviv~SNPvdv~~~~---~~  136 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP----GMTRDDLFNTNAPI----VRDLVAAVASS-----APKAIVGIVSNPVNSTVPI---AA  136 (321)
T ss_pred             ---CCCEEEECCCCCCCC----CCCHHHHHHHHHHH----HHHHHHHHHHH-----CCCeEEEEecCcHHHHHHH---HH
Confidence               679999999975332    12345567777766    55555555554     2346777666332 11100   00


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      ..+....++|....|+.+-.--..|...++..+.
T Consensus       137 ~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        137 ETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             hhhhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence            0112455777788888873222344555666654

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.07  E-value=2.5e-05  Score=69.75  Aligned_cols=76  Identities=22%  Similarity=0.262  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHc-C-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALR-G-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~-G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .++++++++||||+|.||+.++++|++. | .++++++|+..++....+++..           .|+.   ++.+.    
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~---~l~~~----  212 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL---SLEEA----  212 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH---hHHHH----
Confidence            4689999999999999999999999864 6 4899999998776665544311           1222   12222    


Q ss_pred             HhcCCCccEEEEcCCCCCC
Q 023438          105 NIQHHQLNILINNAGIMGT  123 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~  123 (282)
                         ....|+||++++....
T Consensus       213 ---l~~aDiVv~~ts~~~~  228 (340)
T PRK14982        213 ---LPEADIVVWVASMPKG  228 (340)
T ss_pred             ---HccCCEEEECCcCCcC
Confidence               2367999999997543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.03  E-value=1.2e-05  Score=67.34  Aligned_cols=171  Identities=13%  Similarity=0.085  Sum_probs=106.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH-HHHHHHHHH---hCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVK---EIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~-~~~~~~l~~---~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|++||||-+|-=|.-+|+-|+++|++|.-+-|..+.. ....+.+-.   ...+......-+|++|...+.++++.|  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            36999999999999999999999999999776654432 222222211   112445677779999999999999988  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         +++-+.|.|+..+-....+..  +-.-++...|++.++.+....-..      .+-++-.-|+. ..+   +.....
T Consensus       106 ---kPtEiYnLaAQSHVkvSFdlp--eYTAeVdavGtLRlLdAi~~c~l~------~~VrfYQAstS-Ely---Gkv~e~  170 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSFDLP--EYTAEVDAVGTLRLLDAIRACRLT------EKVRFYQASTS-ELY---GKVQEI  170 (376)
T ss_pred             ---CchhhhhhhhhcceEEEeecc--cceeeccchhhhhHHHHHHhcCcc------cceeEEecccH-hhc---ccccCC
Confidence               677778888754431111111  223455677888777766555333      23344444442 222   112222


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHh
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRL  218 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~  218 (282)
                      |-.+..|..+.++|+++|....=.+-.++..+
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAY  202 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAY  202 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhh
Confidence            33455677888999999987543344444443

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.89  E-value=0.00041  Score=60.07  Aligned_cols=83  Identities=19%  Similarity=0.256  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|..+|+.|++.|. ++.+++.+.-                   +.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            67889999988 8999999999999995 8999886522                   2234455566666666666654


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      . .-+++.+..++.      .++|+||.+..
T Consensus       107 ~-~i~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        107 D-FITPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             c-ccChhhHHHHhc------CCCCEEEEcCC
Confidence            2 223444444432      25788888876

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.87  E-value=0.00047  Score=58.51  Aligned_cols=84  Identities=21%  Similarity=0.266  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+++|.|. ||+|..+++.|++.|. +++++|.+.-                   +.+.+.+.+.+.+|..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            357789999988 8999999999999998 7999886531                   334456666677776677777


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ...++. +....++.      .++|+||.+..
T Consensus        87 ~~~i~~-~~~~~l~~------~~~D~VvdaiD  111 (231)
T cd00755          87 EEFLTP-DNSEDLLG------GDPDFVVDAID  111 (231)
T ss_pred             eeecCH-hHHHHHhc------CCCCEEEEcCC
Confidence            666653 33333332      25888888854

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.82  E-value=0.0001  Score=65.79  Aligned_cols=118  Identities=12%  Similarity=0.056  Sum_probs=68.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC-------CEEEEEEcChhh--HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRG-------VHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G-------~~Vii~~r~~~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .+++||||+|.+|.+++..|+..+       .+|++++++...  +.....++...     ...+..|++...++.+.+ 
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~~~~l-   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDPEEAF-   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCHHHHh-
Confidence            468999999999999999999854       589999986531  22211111110     001112333322222222 


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                            .+.|+|||+||...... .+.   .+.++.|+.    +++...+.+.+...   +.+.++++|.
T Consensus        77 ------~~aDiVI~tAG~~~~~~-~~R---~~l~~~N~~----i~~~i~~~i~~~~~---~~~iiivvsN  129 (325)
T cd01336          77 ------KDVDVAILVGAMPRKEG-MER---KDLLKANVK----IFKEQGEALDKYAK---KNVKVLVVGN  129 (325)
T ss_pred             ------CCCCEEEEeCCcCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHhCC---CCeEEEEecC
Confidence                  37899999999754421 222   334555544    46666677666421   2466777776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.82  E-value=0.00014  Score=58.20  Aligned_cols=161  Identities=19%  Similarity=0.167  Sum_probs=95.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ++.|+++.++|.||+|-.|..+.+++++.+-  +|+++.|.+.-...+         +..+.....|.+..++   ....
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~---~a~~   80 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQ---LATN   80 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHH---HHhh
Confidence            4789999999999999999999999999984  799999875322111         2345556667655443   3333


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +    ..+|+.+++-|..+....  .+.+   +.+.---.+.++    ...+..     +-..++.+||.++.       
T Consensus        81 ~----qg~dV~FcaLgTTRgkaG--adgf---ykvDhDyvl~~A----~~AKe~-----Gck~fvLvSS~GAd-------  135 (238)
T KOG4039|consen   81 E----QGPDVLFCALGTTRGKAG--ADGF---YKVDHDYVLQLA----QAAKEK-----GCKTFVLVSSAGAD-------  135 (238)
T ss_pred             h----cCCceEEEeecccccccc--cCce---EeechHHHHHHH----HHHHhC-----CCeEEEEEeccCCC-------
Confidence            2    368999999986532111  1111   111000001111    122221     34578999996653       


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                ......|-..|.-++.-+..|  .+.      ++...+||++......
T Consensus       136 ----------~sSrFlY~k~KGEvE~~v~eL--~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  136 ----------PSSRFLYMKMKGEVERDVIEL--DFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             ----------cccceeeeeccchhhhhhhhc--ccc------EEEEecCcceeccccc
Confidence                      234557878888766433322  222      3345999999765433

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.77  E-value=0.00024  Score=63.84  Aligned_cols=83  Identities=16%  Similarity=0.316  Sum_probs=64.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh---------------------hhHHHHHHHHHHhCCCCcee
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKVD   85 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~---------------------~~~~~~~~~l~~~~~~~~v~   85 (282)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++.++|++.                     .+.+.+.+.+.+.++..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            478899999998 8899999999999998 899999874                     24455567777777778888


Q ss_pred             EEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           86 AMELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        86 ~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .+..|++. +.++.+++       +.|+||.+..
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHhc-------CCCEEEEcCC
Confidence            88888863 34444432       5788888864

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.77  E-value=0.00019  Score=56.75  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++++++|+|+ |++|.++++.|++.| .+|++++|+.+..++..+++....       +..+..+.++.        
T Consensus        15 ~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--------   78 (155)
T cd01065          15 IELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL--------   78 (155)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc--------
Confidence            3467899999998 899999999999996 789999999888777666553210       12233443322        


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                        ..+.|+||++++..
T Consensus        79 --~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 --LAEADLIINTTPVG   92 (155)
T ss_pred             --cccCCEEEeCcCCC
Confidence              23789999999753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.73  E-value=0.00032  Score=58.38  Aligned_cols=83  Identities=16%  Similarity=0.241  Sum_probs=61.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC-------------------hhhHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~-------------------~~~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++++++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+...+.+.+.+|..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            478899999996 8999999999999998 89999987                   23455566677777776667776


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..++.+ +.+.+++       .+.|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            666643 3333333       26789888864

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.72  E-value=0.003  Score=49.42  Aligned_cols=114  Identities=17%  Similarity=0.231  Sum_probs=74.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC--CceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+.|+|++|.+|.++|..|...+.  ++++++++++.++....++......  ..+....   .+.+           ..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence            588999999999999999999885  7999999988887777777653211  1222222   2222           12


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      .+.|++|.+||....+. .+.   .+.++.|.    .+.+...+.+.+..    +.+.++.+|.
T Consensus        68 ~~aDivvitag~~~~~g-~sR---~~ll~~N~----~i~~~~~~~i~~~~----p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKPG-MSR---LDLLEANA----KIVKEIAKKIAKYA----PDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSSTT-SSH---HHHHHHHH----HHHHHHHHHHHHHS----TTSEEEE-SS
T ss_pred             ccccEEEEecccccccc-ccH---HHHHHHhH----hHHHHHHHHHHHhC----CccEEEEeCC
Confidence            37899999999754322 222   23344444    45666667766652    4567777775

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.69  E-value=0.00025  Score=58.03  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=46.3

Q ss_pred             CCCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           29 GSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        29 ~~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      |+||++|||+|                ||-.|.++|+++..+|++|+++.....- ..          ...+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~----------p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-PP----------PPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-cc----------cccceEE--Eec
Confidence            57888888876                5789999999999999999999876321 10          1134333  455


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      ..+++.+.+.+   ....-|++|++|++.
T Consensus        68 sa~em~~~~~~---~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 SAEEMLEAVKE---LLPSADIIIMAAAVS   93 (185)
T ss_dssp             SHHHHHHHHHH---HGGGGSEEEE-SB--
T ss_pred             chhhhhhhhcc---ccCcceeEEEecchh
Confidence            55554444443   344559999999974

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.65  E-value=0.00017  Score=63.12  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=61.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ..++|.||+|..|.-+|++|+++|.+..+.+||..++..+.+++     +.+.-.+.+.  ++..++.+++       ..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~--~p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLG--VPAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCC--CHHHHHHHHh-------cc
Confidence            56899999999999999999999999999999999988887777     3334344444  3677777666       45


Q ss_pred             cEEEEcCCCC
Q 023438          112 NILINNAGIM  121 (282)
Q Consensus       112 d~vi~~ag~~  121 (282)
                      ++|+||+|.+
T Consensus        73 ~VVlncvGPy   82 (382)
T COG3268          73 QVVLNCVGPY   82 (382)
T ss_pred             eEEEeccccc
Confidence            7999999965

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.63  E-value=0.0015  Score=57.40  Aligned_cols=79  Identities=13%  Similarity=0.238  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|++++|+|+++++|.++++.+...|.+|++++++.+..+.. .++     +.+   ..+|..+.+..+.+.+...  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA-----GAD---AVFNYRAEDLADRILAATA--GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence            579999999999999999999999999999999987654443 221     221   1235555444444433221  23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.+++++|
T Consensus       213 ~~d~vi~~~~  222 (325)
T cd08253         213 GVDVIIEVLA  222 (325)
T ss_pred             ceEEEEECCc
Confidence            6999999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.61  E-value=0.00045  Score=60.15  Aligned_cols=76  Identities=17%  Similarity=0.343  Sum_probs=55.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ..++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++...  + .+.....|     +   .      .
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~---~------~  175 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----E---L------P  175 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----h---h------c
Confidence            356899999999 69999999999999999999999988877777665432  1 12222111     1   0      1


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                      ..+.|+||++.+..
T Consensus       176 ~~~~DivInatp~g  189 (270)
T TIGR00507       176 LHRVDLIINATSAG  189 (270)
T ss_pred             ccCccEEEECCCCC
Confidence            23689999999863

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.59  E-value=0.00016  Score=67.50  Aligned_cols=79  Identities=14%  Similarity=0.237  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|+++|||+++ +|.++|+.|++.|++|++.+++........+++.+.  +  +.+...+  +..++   .+    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH---hc----
Confidence            356899999999976 999999999999999999998764444444444332  2  3333222  11111   11    


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                        ..+|+||.++|+.
T Consensus        67 --~~~d~vV~s~gi~   79 (447)
T PRK02472         67 --EDFDLMVKNPGIP   79 (447)
T ss_pred             --CcCCEEEECCCCC
Confidence              1479999999975

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.58  E-value=0.0018  Score=57.44  Aligned_cols=115  Identities=14%  Similarity=0.170  Sum_probs=74.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +.+.|.|+ |++|.++|..|+..|  .+|++++++.+..+....++.+...  ...+....   .+.++       +   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-------l---   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-------C---   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-------h---
Confidence            36788996 999999999999999  4899999999888887777765431  11121221   22221       1   


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                       .+.|++|+++|...... .+..   +.++.|    ..+++...+.+.+..    +.+.++++|.-
T Consensus        67 -~~aDIVIitag~~~~~g-~~R~---dll~~N----~~i~~~~~~~i~~~~----~~~~vivvsNP  119 (306)
T cd05291          67 -KDADIVVITAGAPQKPG-ETRL---DLLEKN----AKIMKSIVPKIKASG----FDGIFLVASNP  119 (306)
T ss_pred             -CCCCEEEEccCCCCCCC-CCHH---HHHHHH----HHHHHHHHHHHHHhC----CCeEEEEecCh
Confidence             37899999999754432 1222   233333    445666777776652    45678888763

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.58  E-value=0.0012  Score=51.23  Aligned_cols=80  Identities=24%  Similarity=0.428  Sum_probs=60.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEEcc
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELD   90 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~~D   90 (282)
                      +++++|.|+ |++|..+++.|+..|. ++.++|.+.=                   +.+...+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            578899988 8999999999999998 7999875421                   345567777788888889999888


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           91 LSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        91 vs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ++ .+...++++       +.|++|.+..
T Consensus        81 ~~-~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 ID-EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             CS-HHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-ccccccccc-------CCCEEEEecC
Confidence            83 344555553       6689988865

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.55  E-value=0.0024  Score=56.56  Aligned_cols=79  Identities=20%  Similarity=0.328  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+++++|+|+++++|.++++.+...|++|++++++.+..+.. ..+     +..   ...|..+.+....+.+....  +
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL-----GAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---eEEecCChHHHHHHHHHhCC--C
Confidence            578999999999999999999999999999999887664433 211     211   12366665555555444322  3


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6899999988

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.51  E-value=0.00099  Score=59.87  Aligned_cols=83  Identities=19%  Similarity=0.350  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh---------------------hhHHHHHHHHHHhCCCCcee
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKVD   85 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~---------------------~~~~~~~~~l~~~~~~~~v~   85 (282)
                      .+++.+|+|.|+ ||+|..+|+.|+..|. ++.++|.+.                     .+.+...+.+.+..+..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            467899999999 8999999999999998 899999873                     23344455666666666777


Q ss_pred             EEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           86 AMELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        86 ~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .+..+++. +.+..+++       +.|+||.+..
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVTA-EELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEeccCCH-HHHHHHHc-------CCCEEEEcCC
Confidence            77777764 33333332       5688888754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.49  E-value=0.00092  Score=61.05  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=61.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC-------------------hhhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~-------------------~~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..+.+.+.+.+.+.++..++..+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            67889999976 8999999999999998 79999988                   445666677777777766666666


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..+++ +.+..+++       +.|+||.+..
T Consensus       212 ~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        212 ERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             ccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            55553 33333333       5789888875

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.47  E-value=0.0008  Score=59.00  Aligned_cols=51  Identities=24%  Similarity=0.259  Sum_probs=45.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI   79 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~   79 (282)
                      ++++++++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+...+++....
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            467899999998 8899999999999998 79999999999888888876554

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.47  E-value=0.0013  Score=55.07  Aligned_cols=82  Identities=18%  Similarity=0.301  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      .+++.+++|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+.+.++..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            367889999997 8999999999999998 699998872                  23445556666666666777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNA  118 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~a  118 (282)
                      ..+++ +.+.+++       .++|+||.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            66654 2233332       3678888774

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.46  E-value=0.0013  Score=55.73  Aligned_cols=83  Identities=18%  Similarity=0.332  Sum_probs=60.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467889999996 8999999999999998 788885432                   2345566667777776677777


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..+++. +.+.++++       ++|+||.+..
T Consensus        97 ~~~i~~-~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLDA-ENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeCH-HHHHHHHh-------CCCEEEEcCC
Confidence            777643 33433333       5789888875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.45  E-value=0.0022  Score=57.20  Aligned_cols=164  Identities=13%  Similarity=0.049  Sum_probs=98.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcChhh--HHHHHHHHHHhC-CC-CceeEEEccCCCHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAA--GKDVKETIVKEI-PS-AKVDAMELDLSSLASVRN   99 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~~~--~~~~~~~l~~~~-~~-~~v~~~~~Dvs~~~~i~~   99 (282)
                      -+++.|+|++|.+|.++|..|+..|.       ++++++.++..  +.....++.... +- .++...   -.+      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDP------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCc------
Confidence            36899999999999999999998885       69999985432  444444443321 00 011110   011      


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                           .+...+-|++|.+||....+. .+..+   .++.|    ..+++.+.+.+.+..+   +.+.+|++|.-.-.+..
T Consensus        73 -----~~~~~daDivvitaG~~~k~g-~tR~d---ll~~N----~~i~~~i~~~i~~~~~---~~~iiivvsNPvD~~t~  136 (322)
T cd01338          73 -----NVAFKDADWALLVGAKPRGPG-MERAD---LLKAN----GKIFTAQGKALNDVAS---RDVKVLVVGNPCNTNAL  136 (322)
T ss_pred             -----HHHhCCCCEEEEeCCCCCCCC-CcHHH---HHHHH----HHHHHHHHHHHHhhCC---CCeEEEEecCcHHHHHH
Confidence                 112237799999999754432 23222   34444    4457777777777521   25677777752211110


Q ss_pred             cCCccccCCCCCCC-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEE
Q 023438          180 HEGIRFDKINDPSG-YNGFRAYSQSKLANILHANELARRLKEDGVDIT  226 (282)
Q Consensus       180 ~~~~~~~~~~~~~~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~  226 (282)
                      .       .....| .|....|+.++.....|...+++.+.-.-..|+
T Consensus       137 ~-------~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~  177 (322)
T cd01338         137 I-------AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVK  177 (322)
T ss_pred             H-------HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeE
Confidence            0       112233 777779999999989999999998865332355

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00704 MDH Malate dehydrogenase

Probab=97.44  E-value=0.0024  Score=57.06  Aligned_cols=113  Identities=13%  Similarity=0.141  Sum_probs=68.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHH--HH--H
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLAS--VR--N   99 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~--i~--~   99 (282)
                      ++.||||+|.+|..++..|+..|.       +++++|+++  +.+                .....|+.+...  ..  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            589999999999999999998663       499999876  322                223334443310  00  0


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      +.....+...+.|+||+.||....+. .+..   +.+..|    ..+++.+.+.+.+..+   +.+.++++|.
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g-~tR~---dll~~N----~~i~~~i~~~i~~~~~---~~~iiivvsN  127 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPG-MERA---DLLRKN----AKIFKEQGEALNKVAK---PTVKVLVVGN  127 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcC-CcHH---HHHHHh----HHHHHHHHHHHHHhCC---CCeEEEEeCC
Confidence            00112223347899999999754432 2322   234434    4457777777777510   3567777765

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.42  E-value=0.00053  Score=57.34  Aligned_cols=160  Identities=14%  Similarity=0.161  Sum_probs=97.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHH-cCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLAL-RGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~-~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      -+-.++||||+-|-+|..+|+.|.. .|- .||+.+--...     +...+     .--++-.|+-|...+++++-.   
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~-----~GPyIy~DILD~K~L~eIVVn---  108 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTD-----VGPYIYLDILDQKSLEEIVVN---  108 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhcc-----cCCchhhhhhccccHHHhhcc---
Confidence            4557999999999999999998885 576 57765532211     11111     123456788888888776554   


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        .++|-+||-.+....   ..+.+.-....+|+.|.-++++.+..+          +-++ |+-|.-|..++.+.-++.
T Consensus       109 --~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~----------kL~i-FVPSTIGAFGPtSPRNPT  172 (366)
T KOG2774|consen  109 --KRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKH----------KLKV-FVPSTIGAFGPTSPRNPT  172 (366)
T ss_pred             --cccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHc----------CeeE-eecccccccCCCCCCCCC
Confidence              389999997764322   233334445788999987777666544          2234 444444444333222211


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      +  .-.-..+...|+.||.-.+.+.+.+...+.
T Consensus       173 P--dltIQRPRTIYGVSKVHAEL~GEy~~hrFg  203 (366)
T KOG2774|consen  173 P--DLTIQRPRTIYGVSKVHAELLGEYFNHRFG  203 (366)
T ss_pred             C--CeeeecCceeechhHHHHHHHHHHHHhhcC
Confidence            1  111223467899999988877776666554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.41  E-value=0.00021  Score=59.41  Aligned_cols=47  Identities=21%  Similarity=0.168  Sum_probs=40.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   73 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~   73 (282)
                      ..+++||+++|+|.+ .+|.++|+.|.+.|++|++.+++.+..+...+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            567899999999995 89999999999999999999998776555544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.38  E-value=0.0019  Score=58.49  Aligned_cols=83  Identities=19%  Similarity=0.267  Sum_probs=60.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            367899999998 8999999999999998 799988764                   3456677778888787777777


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ...++. +....+++       +.|+||.+..
T Consensus       104 ~~~i~~-~~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        104 VRRLTW-SNALDELR-------DADVILDGSD  127 (355)
T ss_pred             EeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            766654 22222222       4566666653

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.36  E-value=0.0058  Score=54.40  Aligned_cols=119  Identities=11%  Similarity=0.151  Sum_probs=78.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+++++.|+|+ |.+|.++|..|+..|.  ++++++++++.+.....++....+- .++....   .+.+       .  
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~-------~--   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYS-------D--   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHH-------H--
Confidence            35679999998 9999999999999997  7999999998888888877764321 1222221   1211       1  


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                        +.+-|++|..||....+. .+..   +.++.|.    .+++.+.+.+.+..    ..+.++++|.-.
T Consensus        71 --~~~adivIitag~~~k~g-~~R~---dll~~N~----~i~~~i~~~i~~~~----~~~~vivvsNP~  125 (315)
T PRK00066         71 --CKDADLVVITAGAPQKPG-ETRL---DLVEKNL----KIFKSIVGEVMASG----FDGIFLVASNPV  125 (315)
T ss_pred             --hCCCCEEEEecCCCCCCC-CCHH---HHHHHHH----HHHHHHHHHHHHhC----CCeEEEEccCcH
Confidence              227799999999754432 2222   2344443    34666666666652    356788877633

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.33  E-value=0.0018  Score=55.50  Aligned_cols=83  Identities=13%  Similarity=0.278  Sum_probs=59.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.-                   +.+.+.+.+.+.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            367899999999 9999999999999997 7888875532                   233445666677777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ...++. +.+..++       .++|+||.+..
T Consensus       108 ~~~i~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHH-------hcCCEEEecCC
Confidence            766653 3333333       26788888864

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.33  E-value=0.0023  Score=51.88  Aligned_cols=78  Identities=21%  Similarity=0.366  Sum_probs=53.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh------------------hhHHHHHHHHHHhCCCCceeEEEccCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~------------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      +++|.|+ ||+|..+++.|++.|. ++.++|.+.                  .+.+...+.+.+.+|..++..+...++.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            3788886 9999999999999998 699999875                  2334445556666666666666666644


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                       +.+.+++       .++|+||.+..
T Consensus        80 -~~~~~~l-------~~~DlVi~~~d   97 (174)
T cd01487          80 -NNLEGLF-------GDCDIVVEAFD   97 (174)
T ss_pred             -hhHHHHh-------cCCCEEEECCC
Confidence             2233332       35788887743

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.32  E-value=0.00067  Score=59.34  Aligned_cols=49  Identities=16%  Similarity=0.251  Sum_probs=42.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIV   76 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~   76 (282)
                      .++++++++|+|+ ||+|++++..|++.| .+|++++|+.++.+...+++.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            4678999999997 999999999999999 689999999888777766653

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.32  E-value=0.0023  Score=56.05  Aligned_cols=80  Identities=16%  Similarity=0.291  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|+++|.|+ ||-|++++..|++.|+ +|.++.|+.++.+.+.+.+...++...+  ...|.   .++....     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~--~~~~~---~~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV--VGVDA---RGIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE--EecCH---hHHHHHH-----
Confidence            467899999998 9999999999999997 7999999999888887776544322111  11222   2222111     


Q ss_pred             cCCCccEEEEcCCC
Q 023438          107 QHHQLNILINNAGI  120 (282)
Q Consensus       107 ~~g~id~vi~~ag~  120 (282)
                        ...|+|||+...
T Consensus       193 --~~~divINaTp~  204 (283)
T PRK14027        193 --AAADGVVNATPM  204 (283)
T ss_pred             --hhcCEEEEcCCC
Confidence              257999998865

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.31  E-value=0.0011  Score=58.00  Aligned_cols=79  Identities=16%  Similarity=0.157  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+++...   ..+  .  .+...+++..       
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~--~--~~~~~~~~~~-------  186 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVI--T--RLEGDSGGLA-------  186 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccc--e--eccchhhhhh-------
Confidence            467899999987 9999999999999997 7999999998887777665332   111  1  1111122211       


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                      .....|+||++....
T Consensus       187 ~~~~~DiVInaTp~g  201 (282)
T TIGR01809       187 IEKAAEVLVSTVPAD  201 (282)
T ss_pred             cccCCCEEEECCCCC
Confidence            123679999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.30  E-value=0.0048  Score=68.35  Aligned_cols=185  Identities=14%  Similarity=0.087  Sum_probs=109.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.++.++|++.+++++.+++.+|.++|+.|+++..... .   .......  ...+..+...-.+.+++..+++.+....
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSASPL--ASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---ccccccc--ccccccccccccchHHHHHHHHhhhccc
Confidence            45788888888999999999999999999887742211 0   0000000  1123334444455677888888887777


Q ss_pred             CCccEEEEcCCCCCCCCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          109 HQLNILINNAGIMGTPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++++.+||..+......+ .+.......-...+...|.++|++.+.+...     +++.++.++...|..+....     
T Consensus      1827 ~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-----~~~~~~~vsr~~G~~g~~~~----- 1896 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-----ARASFVTVSRIDGGFGYSNG----- 1896 (2582)
T ss_pred             cccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-----CCeEEEEEEecCCccccCCc-----
Confidence            889999998875422111 0101111112234556677788776665542     45688888886654421000     


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG  233 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg  233 (282)
                       ....++.. .--....+++.+|+|+++.|+..--  +|...+.|.
T Consensus      1897 -~~~~~~~~-~~~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~ 1938 (2582)
T TIGR02813      1897 -DADSGTQQ-VKAELNQAALAGLTKTLNHEWNAVF--CRALDLAPK 1938 (2582)
T ss_pred             -cccccccc-cccchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCC
Confidence             00000000 0012357899999999999997544  777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.30  E-value=0.0014  Score=57.23  Aligned_cols=79  Identities=20%  Similarity=0.306  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+.+|++++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+.+...  .+.  ..+..+.+..+       
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~--~~~~~~~~~~~-------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVE--AAALADLEGLE-------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--ccc--ccccccccccc-------
Confidence            5567899999998 8999999999999996 799999999998888888765421  111  12222222111       


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                          ..|+|||+....
T Consensus       190 ----~~dliINaTp~G  201 (283)
T COG0169         190 ----EADLLINATPVG  201 (283)
T ss_pred             ----ccCEEEECCCCC
Confidence                468999998753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.30  E-value=0.0014  Score=60.49  Aligned_cols=77  Identities=13%  Similarity=0.245  Sum_probs=54.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ ||+|.++++.|++.|+ +++++.|+.++.+...+++    +.  ..     +...+++...      
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~--~~-----~~~~~~l~~~------  239 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RN--AS-----AHYLSELPQL------  239 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cC--Ce-----EecHHHHHHH------
Confidence            578999999999 9999999999999996 7999999987766655543    11  11     1112233222      


Q ss_pred             cCCCccEEEEcCCCCCC
Q 023438          107 QHHQLNILINNAGIMGT  123 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~  123 (282)
                       ..+.|+||++.+...+
T Consensus       240 -l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        240 -IKKADIIIAAVNVLEY  255 (414)
T ss_pred             -hccCCEEEECcCCCCe
Confidence             2367999999986444

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.29  E-value=0.0028  Score=57.70  Aligned_cols=63  Identities=24%  Similarity=0.309  Sum_probs=48.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC-------------------hhhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~-------------------~~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.+|..++..+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            57789999988 8999999999999997 89999876                   224455566677776766677766


Q ss_pred             ccCC
Q 023438           89 LDLS   92 (282)
Q Consensus        89 ~Dvs   92 (282)
                      ..++
T Consensus       118 ~~i~  121 (370)
T PRK05600        118 ERLT  121 (370)
T ss_pred             eecC
Confidence            5554

>PRK08328 hypothetical protein; Provisional

Probab=97.29  E-value=0.0033  Score=53.44  Aligned_cols=37  Identities=24%  Similarity=0.330  Sum_probs=32.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~   65 (282)
                      .+++.+++|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            367889999998 8999999999999997 788888653

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.28  E-value=0.00063  Score=64.83  Aligned_cols=49  Identities=27%  Similarity=0.384  Sum_probs=42.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+...+++
T Consensus       374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            34678999999999 69999999999999999999999987776665543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.26  E-value=0.0035  Score=55.75  Aligned_cols=105  Identities=18%  Similarity=0.138  Sum_probs=57.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHH-c--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLAL-R--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~-~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.++|+||+|+||.+++..|.. .  +.++++++++.. .....-.+...  . ....+.+  .+.+++.+.       .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~-~~~~i~~--~~~~d~~~~-------l   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--P-TAVKIKG--FSGEDPTPA-------L   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--C-CCceEEE--eCCCCHHHH-------c
Confidence            4689999999999999998855 3  347888888743 21111122110  1 1111221  111122111       1


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKT  157 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~  157 (282)
                      .+.|+||.++|...... .+   -.+.+..|...    ++.+.+.+.+.
T Consensus        68 ~~~DiVIitaG~~~~~~-~~---R~dll~~N~~i----~~~ii~~i~~~  108 (312)
T PRK05086         68 EGADVVLISAGVARKPG-MD---RSDLFNVNAGI----VKNLVEKVAKT  108 (312)
T ss_pred             CCCCEEEEcCCCCCCCC-CC---HHHHHHHHHHH----HHHHHHHHHHh
Confidence            36899999999754432 12   23345556554    55555666554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.25  E-value=0.0034  Score=53.65  Aligned_cols=83  Identities=16%  Similarity=0.306  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.-                   +.+.+.+.+.+.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            467889999988 8999999999999997 7888876533                   233445556666666666666


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ...++. +.+.+++       .+.|+||.+..
T Consensus       100 ~~~i~~-~~~~~~~-------~~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALI-------AEHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHh-------hcCCEEEEcCC
Confidence            555543 3333333       25677777764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.25  E-value=0.0014  Score=55.51  Aligned_cols=75  Identities=19%  Similarity=0.241  Sum_probs=57.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +.++|.|+ |-+|..+|+.|.+.|++|++++++++...+...+      ...+..+.+|-++++.++++      ...+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a------gi~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA------GIDDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc------CCCcC
Confidence            35677777 8899999999999999999999998876653331      13578899999998766664      11267


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      |+++-..|
T Consensus        68 D~vva~t~   75 (225)
T COG0569          68 DAVVAATG   75 (225)
T ss_pred             CEEEEeeC
Confidence            88888877

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.24  E-value=0.0048  Score=55.11  Aligned_cols=115  Identities=13%  Similarity=0.094  Sum_probs=69.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHH-H-HH--
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVR-N-FA--  101 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~-~-~~--  101 (282)
                      ++.|+|++|.+|.+++..|+..|.       +++++|+++..              .+......|+.+..... . ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            478999999999999999998654       59999986432              01223344555443110 0 00  


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ....+...+.|+||++||.....    .++..+.+..|+    .+++.+.+.+.+..   ++.+.++++|.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N~----~i~k~i~~~i~~~~---~~~~iiivvsN  126 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKNV----KIFKEQGRALDKLA---KKDCKVLVVGN  126 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHHH----HHHHHHHHHHHhhC---CCCeEEEEeCC
Confidence            01122335789999999975432    122344455454    45777777777641   03467777776

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.23  E-value=0.0022  Score=57.40  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|++|++|.++++.+...|++|+.++++.++.+...+.+     +.. ..  .|..+.+++.+.+.+...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~v--i~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DA--FNYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-ee--EEcCCcccHHHHHHHhCC--C
Confidence            5789999999999999999988899999999888876644443322     321 11  233322233333333322  4


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6899999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06849 hypothetical protein; Provisional

Probab=97.22  E-value=0.0033  Score=57.61  Aligned_cols=82  Identities=15%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~~~  108 (282)
                      +.++|||||++..+|..+++.|.+.|++|++++.+........+..      .....+...-.+.+. ++.+.+-+ .+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~-~~~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIV-QRE   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHH-HHc
Confidence            4589999999999999999999999999999998864433211111      122223222234443 34444433 333


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                       ++|+||-...
T Consensus        76 -~id~vIP~~e   85 (389)
T PRK06849         76 -NIDLLIPTCE   85 (389)
T ss_pred             -CCCEEEECCh
Confidence             5899988776

>PRK08223 hypothetical protein; Validated

Probab=97.19  E-value=0.0031  Score=55.04  Aligned_cols=82  Identities=13%  Similarity=0.220  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.=                   +.+.+.+.+.+.+|..++..+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            468899999998 8999999999999998 7888886632                   233345556666666666666


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNA  118 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~a  118 (282)
                      ...++.. .+.++++       +.|+||.+.
T Consensus       103 ~~~l~~~-n~~~ll~-------~~DlVvD~~  125 (287)
T PRK08223        103 PEGIGKE-NADAFLD-------GVDVYVDGL  125 (287)
T ss_pred             ecccCcc-CHHHHHh-------CCCEEEECC
Confidence            6666532 2333333       457776443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.18  E-value=0.0039  Score=51.76  Aligned_cols=81  Identities=20%  Similarity=0.333  Sum_probs=54.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC---hhh---------------HHHHHHHHHHhCCCCceeEEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAA---------------GKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~---~~~---------------~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      .++.++++|.|+ ||+|..+|+.|++.|. +++++|.+   .+.               .+...+.+.+.+|..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            467889999999 8999999999999998 79999988   222               122333444445555566666


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEc
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINN  117 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~  117 (282)
                      .+++. +.+..++       .+.|+||-+
T Consensus        97 ~~i~~-~~~~~~~-------~~~DlVi~a  117 (200)
T TIGR02354        97 EKITE-ENIDKFF-------KDADIVCEA  117 (200)
T ss_pred             eeCCH-hHHHHHh-------cCCCEEEEC
Confidence            66643 2233222       356777776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.13  E-value=0.003  Score=56.55  Aligned_cols=78  Identities=18%  Similarity=0.288  Sum_probs=50.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |.++||+||+||+|...++-+...|+.++++..+.++.+ ..+++     +..   ...|..+.+ +.+.++++... ..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~-~~~~v~~~t~g-~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED-FVEQVRELTGG-KG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc-HHHHHHHHcCC-CC
Confidence            899999999999999999999999987666666655444 33332     322   123444433 33333322211 25


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      +|+++.+.|
T Consensus       212 vDvv~D~vG  220 (326)
T COG0604         212 VDVVLDTVG  220 (326)
T ss_pred             ceEEEECCC
Confidence            999999998

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.13  E-value=0.0035  Score=56.60  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|++|++|..+++.+...|++|+.++++.++.+...+++     +... .  .|..+.+++.+.+.+..  .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~--~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE-A--FNYKEEPDLDAALKRYF--PE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE-E--EECCCcccHHHHHHHHC--CC
Confidence            5789999999999999999988899999998888776644433232     3221 1  23332223333333332  13


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6899999987

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.12  E-value=0.003  Score=56.18  Aligned_cols=79  Identities=16%  Similarity=0.278  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|++|++|.++++.+...|++|+.++++.++.+.. +++     +...   ..|..+.+.+.+.++....  +
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~~~~~~~~--~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDV---AFNYKTVKSLEETLKKASP--D  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCE---EEeccccccHHHHHHHhCC--C
Confidence            578999999999999999998888999999998887654433 222     3221   1233333334444444322  3


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6899999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.12  E-value=0.009  Score=56.42  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=70.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-------------H
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-------------A   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-------------~   95 (282)
                      ..+.+++|+|+ |.+|...+..+...|++|++++++.++++... ++     +.+  ++..|..+.             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl-----GA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM-----GAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCe--EEEeccccccccccchhhhcchh
Confidence            35789999998 89999999999999999999999987755433 23     333  222233221             1


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      ..+...+.+.+..+..|++|.++|......                 +..+++..+..++.       ++.|+.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp-------GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP-------GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC-------CCEEEEEccC
Confidence            122222222233357999999999753211                 11223445555553       6788888763

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.10  E-value=0.0042  Score=54.34  Aligned_cols=79  Identities=14%  Similarity=0.282  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++|+|+++++|.++++.+...|++|++++++.+..+.. +++     +..   ...|..+.+....+.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence            578999999999999999999999999999999887654443 222     211   123444433333333322 1 24


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++++++|
T Consensus       208 ~~d~vi~~~g  217 (323)
T cd05276         208 GVDVILDMVG  217 (323)
T ss_pred             CeEEEEECCc
Confidence            6999999988

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.09  E-value=0.0049  Score=54.13  Aligned_cols=50  Identities=20%  Similarity=0.238  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---hHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVK   77 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---~~~~~~~~l~~   77 (282)
                      .++++|+++|.|+ ||-+++++-.|+..|. +|.++.|+.+   +.+.+.+++..
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            4578899999998 6779999999999997 7999999953   55665555533

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.08  E-value=0.0061  Score=47.57  Aligned_cols=78  Identities=19%  Similarity=0.233  Sum_probs=54.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+...+.+++.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 9999999999999998 688887552                   133445566666666667777776665


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +... .       ..+.++|++|.+..
T Consensus        80 ~~~~-~-------~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-D-------DFLDGVDLVIDAID   98 (143)
T ss_pred             hhhH-H-------HHhcCCCEEEECCC
Confidence            4322 1       12236788888865

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.07  E-value=0.0065  Score=55.36  Aligned_cols=76  Identities=14%  Similarity=0.183  Sum_probs=53.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.+++++|+|+ |.+|..+++.|...|++|++++|+.++++...+.    + +..   +..+..+.+++.+.+.      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~----~-g~~---v~~~~~~~~~l~~~l~------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE----F-GGR---IHTRYSNAYEIEDAVK------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh----c-Cce---eEeccCCHHHHHHHHc------
Confidence            45677999988 7999999999999999999999987765443332    2 211   2234555555544432      


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                       ..|++|++++.
T Consensus       230 -~aDvVI~a~~~  240 (370)
T TIGR00518       230 -RADLLIGAVLI  240 (370)
T ss_pred             -cCCEEEEcccc
Confidence             57999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.07  E-value=0.0028  Score=56.76  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=52.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      |.+++|+||+|++|.++++.+...|+ +|+.++++.++.+...+++     +... .  .|..+ +++.+.+.++..  +
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCC-CCHHHHHHHHCC--C
Confidence            38999999999999999988888999 7999988876654443333     3221 1  23333 223333333322  4


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       224 gvd~vid~~g  233 (345)
T cd08293         224 GVDVYFDNVG  233 (345)
T ss_pred             CceEEEECCC
Confidence            6999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.06  E-value=0.007  Score=50.15  Aligned_cols=83  Identities=18%  Similarity=0.314  Sum_probs=56.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---------------------hHHHHHHHHHHhCCCCceeE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---------------------AGKDVKETIVKEIPSAKVDA   86 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---------------------~~~~~~~~l~~~~~~~~v~~   86 (282)
                      +++.+++|.|+ ||+|.++++.|+..|. ++.++|.+.-                     +.+...+.+++.+|..++..
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            56789999988 5699999999999998 6888875521                     22334555667777777777


Q ss_pred             EEccCCC-HHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           87 MELDLSS-LASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        87 ~~~Dvs~-~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +..++.+ .+.....+       .++|+||.+..
T Consensus        96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~~d  122 (198)
T cd01485          96 VEEDSLSNDSNIEEYL-------QKFTLVIATEE  122 (198)
T ss_pred             EecccccchhhHHHHH-------hCCCEEEECCC
Confidence            7666653 22222222       36788886643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.06  E-value=0.0058  Score=55.89  Aligned_cols=46  Identities=22%  Similarity=0.400  Sum_probs=42.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l   75 (282)
                      +++++++|.|+ |-+|.-+|++|+++|. +|+++.|+.++..++.+++
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            79999999999 7899999999999995 7999999999988887776

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.05  E-value=0.012  Score=50.21  Aligned_cols=79  Identities=18%  Similarity=0.190  Sum_probs=53.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++.+++|+|+++ +|.++++.+...|.+|++++++.+..+.. +++     +..   ...|..+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD---HVIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc---eeccCCcCCHHHHHH---HhcC
Confidence            3678999999988 99999999999999999999886554332 222     211   112444433333333   2233


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|+++++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.05  E-value=0.0044  Score=55.87  Aligned_cols=79  Identities=15%  Similarity=0.243  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|+.+||.||+||+|.+.++-+...|+..+++.++.+. .+..+++     +..   ...|..+++-++.+.+..   .+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~l-----GAd---~vvdy~~~~~~e~~kk~~---~~  224 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKL-----GAD---EVVDYKDENVVELIKKYT---GK  224 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHc-----CCc---EeecCCCHHHHHHHHhhc---CC
Confidence            67899999999999999999999999554555555443 2223332     211   235787744333333322   56


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|+|+-|+|.
T Consensus       225 ~~DvVlD~vg~  235 (347)
T KOG1198|consen  225 GVDVVLDCVGG  235 (347)
T ss_pred             CccEEEECCCC
Confidence            89999999995

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.04  E-value=0.012  Score=52.56  Aligned_cols=73  Identities=19%  Similarity=0.239  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|.+ |+|...++.+...|++|+.++|+.++.+...+ +     +....   .|-+|++..+.+.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~~---i~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADHV---INSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcEE---EEcCCchhhHHhHh-------
Confidence            38999999998 99999999888899999999999887655433 2     33322   23335454444433       


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2799999987

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.02  E-value=0.0025  Score=54.98  Aligned_cols=75  Identities=15%  Similarity=0.228  Sum_probs=55.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++||+|||+- |+.++++|.+.|++|+...++....+...+        .....+..+.-+.+++..++.+.     ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~-----~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRH-----SI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhc-----CC
Confidence            36999999998 999999999999999999888654322211        11234556677777777666553     78


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      |+||..+..
T Consensus        67 ~~VIDAtHP   75 (256)
T TIGR00715        67 DILVDATHP   75 (256)
T ss_pred             CEEEEcCCH
Confidence            999999874

This enzyme was found to be a monomer by gel filtration.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.02  E-value=0.0052  Score=53.98  Aligned_cols=41  Identities=27%  Similarity=0.338  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~   68 (282)
                      .+++|++++|+|. |++|.++|+.|...|++|++++|+.+..
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            5789999999999 7799999999999999999999987654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.95  E-value=0.019  Score=50.95  Aligned_cols=117  Identities=15%  Similarity=0.152  Sum_probs=69.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.|+|++|.+|.++|..|+..|.  ++++++.+  .++....++.....  .+....+.  ..+++       .+...+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~--~~~~~-------y~~~~d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL--GPEEL-------KKALKG   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec--CCCch-------HHhcCC
Confidence            678999999999999999998884  79999987  33333333433211  11111110  00111       112337


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .|++|.+||....+. .+-   .+.++.|..    +++...+.+.+.    ++.+.++++|.-.
T Consensus        69 aDivvitaG~~~k~g-~tR---~dll~~N~~----i~~~i~~~i~~~----~p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRKPG-MTR---DDLFNINAG----IVRDLATAVAKA----CPKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEccCch
Confidence            899999999754432 222   233555544    456666666654    2467888888744

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.94  E-value=0.0017  Score=60.50  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=53.2

Q ss_pred             CCCCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC
Q 023438           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (282)
Q Consensus        28 ~~~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv   91 (282)
                      +++||++|||+|                ||-.|.+||+++..+|++|.++.-....         . . ...+..+  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---------~-~-p~~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL---------A-D-PQGVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC---------C-C-CCCceEE--Ee
Confidence            589999999997                5778999999999999999998743210         0 1 2234444  33


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        92 s~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      ..   .+++.+.+.+.+. .|++|++|.+.
T Consensus       320 ~t---a~eM~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        320 ES---ARQMLAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             cC---HHHHHHHHHhhCC-CCEEEEecccc
Confidence            33   4444444444443 69999999974

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.94  E-value=0.0095  Score=51.61  Aligned_cols=79  Identities=19%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcC----CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           34 AIVTGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G----~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +.|+|++|.+|..++..|+..|    .+|+++|.+++.++....++.......    ....++-.++..+.+       .
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~----~~~~i~~~~d~~~~~-------~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL----ADIKVSITDDPYEAF-------K   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc----cCcEEEECCchHHHh-------C
Confidence            4689998899999999999999    689999999888777777765432110    011221111122222       3


Q ss_pred             CccEEEEcCCCCCC
Q 023438          110 QLNILINNAGIMGT  123 (282)
Q Consensus       110 ~id~vi~~ag~~~~  123 (282)
                      +.|+||.++|....
T Consensus        70 ~aDiVv~t~~~~~~   83 (263)
T cd00650          70 DADVVIITAGVGRK   83 (263)
T ss_pred             CCCEEEECCCCCCC
Confidence            67999999997544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.93  E-value=0.0083  Score=49.67  Aligned_cols=81  Identities=20%  Similarity=0.278  Sum_probs=56.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+++|.|+ ||+|.++++.|+..|. ++.++|.+.-                   +.+.+.+.+++.+|..++..+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            67789999986 6699999999999998 6888875521                   2344566677777777777766


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..+++  .....+       .++|++|.+..
T Consensus        98 ~~~~~--~~~~~~-------~~~dvVi~~~~  119 (197)
T cd01492          98 DDISE--KPEEFF-------SQFDVVVATEL  119 (197)
T ss_pred             cCccc--cHHHHH-------hCCCEEEECCC
Confidence            65652  122222       36788887743

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.90  E-value=0.0093  Score=50.72  Aligned_cols=80  Identities=23%  Similarity=0.323  Sum_probs=53.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+.=                   +.+.+.+.+.+.+|..++..+..+++
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            3678875 8999999999999998 7888876532                   23334555666666677777777776


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +.++...      ..+.++|+||.+..
T Consensus        80 ~~~~~~~------~f~~~~DvVi~a~D  100 (234)
T cd01484          80 PEQDFND------TFFEQFHIIVNALD  100 (234)
T ss_pred             hhhhchH------HHHhCCCEEEECCC
Confidence            5332211      11236788877643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.88  E-value=0.0071  Score=53.55  Aligned_cols=41  Identities=29%  Similarity=0.355  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.+..+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46899999999999999999999999999999887665433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.85  E-value=0.0018  Score=44.28  Aligned_cols=34  Identities=24%  Similarity=0.341  Sum_probs=23.5

Q ss_pred             CC-CEEEEecCCChhHHH--HHHHHHHcCCEEEEEEcC
Q 023438           30 SG-LTAIVTGATSGIGTE--TARVLALRGVHVVMGVRD   64 (282)
Q Consensus        30 ~~-~~~lItG~s~gIG~a--ia~~l~~~G~~Vii~~r~   64 (282)
                      +| |++||+|+|+|+|+|  |+..+ ..|++.+-++..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            44 899999999999999  55555 678888877654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.84  E-value=0.0074  Score=56.01  Aligned_cols=46  Identities=30%  Similarity=0.485  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~   74 (282)
                      ++++++++|.|+ |.+|..+++.|...|+ +|++++|+.++.....++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999987 9999999999999998 799999998776655544

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.83  E-value=0.038  Score=49.17  Aligned_cols=117  Identities=13%  Similarity=0.025  Sum_probs=75.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCc-eeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~-v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ..+.|+|+ |.+|.++|..|+..|.  ++++++.+.+.+.....++....+-.. ......  .|.+       .    .
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----h
Confidence            47899996 9999999999998885  799999988877777777765431101 111111  1222       1    1


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .+.|++|.+||....+. .+-.   +.++.    ..-+++.+.+.+.+.    ++.+.++++|.-.
T Consensus        70 ~~adivvitaG~~~k~g-~~R~---dll~~----N~~i~~~~~~~i~~~----~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQNEG-ESRL---DLVQR----NVDIFKGIIPKLVKY----SPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCCCC-CCHH---HHHHH----HHHHHHHHHHHHHHh----CCCcEEEEccChH
Confidence            26799999999754422 2322   23333    344577777777765    2467888888743

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.81  E-value=0.0067  Score=49.35  Aligned_cols=44  Identities=27%  Similarity=0.252  Sum_probs=37.3

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~   69 (282)
                      ....+.|+++.|.|. |.||+++|+.|...|++|+..+|+.....
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            346789999999987 99999999999999999999999977544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.79  E-value=0.038  Score=49.00  Aligned_cols=115  Identities=16%  Similarity=0.143  Sum_probs=74.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--C-CceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           34 AIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--S-AKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~-~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.|.|+ |.+|.++|..|+..|.  ++++++.+.+.++.....+.....  . .++.....|   .       +.+    
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~---y-------~~~----   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD---Y-------DDC----   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC---H-------HHh----
Confidence            678898 9999999999998885  799999998877777777765321  1 123333222   1       122    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      .+-|++|.+||....+. .+.+ -.+.+..|    ..+++...+.+.+..    +.+.++.+|.-
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~N----~~I~~~i~~~i~~~~----p~~i~ivvsNP  121 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQTN----AKIIREIMGNITKVT----KEAVIILITNP  121 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEecCc
Confidence            36799999999754432 2211 12234434    446788888887762    45677777763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.78  E-value=0.011  Score=52.48  Aligned_cols=79  Identities=24%  Similarity=0.345  Sum_probs=53.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+.-                   +.+...+.+.+.++..++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            4788887 9999999999999998 6888875432                   33444555666666667777777776


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +.+.....+       .++|+||.+.-
T Consensus        80 ~~~~~~~f~-------~~~DvVv~a~D   99 (312)
T cd01489          80 DPDFNVEFF-------KQFDLVFNALD   99 (312)
T ss_pred             CccchHHHH-------hcCCEEEECCC
Confidence            532112222       25677777653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.76  E-value=0.0061  Score=53.33  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++||.++|.|.|+-+|+.++..|.+.|++|.++.|.
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            467899999999998889999999999999998888763

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.76  E-value=0.021  Score=50.99  Aligned_cols=122  Identities=12%  Similarity=0.092  Sum_probs=71.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+.+.+.|+|+ |.+|..++..++..| +++++++.+.+.++.....+....   ........+....+.+ .+      
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~---~~~~~~~~i~~~~d~~-~l------   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS---TLVGSNINILGTNNYE-DI------   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc---cccCCCeEEEeCCCHH-Hh------
Confidence            35678999997 899999999999999 689999998766543332222110   0000001111111122 11      


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                       .+.|+||.++|...... .+.   .+.+..|.    -+.+.+.+.+.+.    ++.+.++++|...
T Consensus        72 -~~ADiVVitag~~~~~g-~~r---~dll~~n~----~i~~~i~~~i~~~----~p~a~vivvsNP~  125 (319)
T PTZ00117         72 -KDSDVVVITAGVQRKEE-MTR---EDLLTING----KIMKSVAESVKKY----CPNAFVICVTNPL  125 (319)
T ss_pred             -CCCCEEEECCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecChH
Confidence             26799999999754321 122   33455555    4566677777665    2456677777643

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.75  E-value=0.0075  Score=53.47  Aligned_cols=78  Identities=15%  Similarity=0.287  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+||+|++|.++++.+...|++|+.++++.++.+... ++     +.. ..  .|..+.+ +.+.+.+...  +
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~-----Ga~-~v--i~~~~~~-~~~~v~~~~~--~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-EL-----GFD-AV--FNYKTVS-LEEALKEAAP--D  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC-EE--EeCCCcc-HHHHHHHHCC--C
Confidence            5789999999999999999999999999999988876543332 22     322 11  2333322 2222233221  4


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            6899999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.74  E-value=0.0046  Score=49.82  Aligned_cols=39  Identities=26%  Similarity=0.322  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .+++|++++|+|++.-+|..+++.|.+.|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999999998863

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK04148 hypothetical protein; Provisional

Probab=96.74  E-value=0.0057  Score=47.17  Aligned_cols=56  Identities=18%  Similarity=0.089  Sum_probs=45.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      +++++++.|.+  .|.++|..|++.|++|+.+|.++...+...+    .    .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~----~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----L----GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----h----CCeEEECcCCCCC
Confidence            56789999987  8889999999999999999999876444322    1    3678889998765

>PRK07411 hypothetical protein; Validated

Probab=96.74  E-value=0.012  Score=54.04  Aligned_cols=65  Identities=25%  Similarity=0.310  Sum_probs=50.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .++..+|+|.|+ ||+|..+++.|+..|. ++.++|.+.=                   +.+...+.+.+.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999988 8999999999999998 7888875522                   234556677777777777777


Q ss_pred             EccCCC
Q 023438           88 ELDLSS   93 (282)
Q Consensus        88 ~~Dvs~   93 (282)
                      ...++.
T Consensus       114 ~~~~~~  119 (390)
T PRK07411        114 ETRLSS  119 (390)
T ss_pred             ecccCH
Confidence            766654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.72  E-value=0.025  Score=47.57  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=37.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      ++.|+||+|.+|.+++..|++.|++|++.+|+.+..+...+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            5889999999999999999999999999999988776655543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.70  E-value=0.0077  Score=56.25  Aligned_cols=73  Identities=19%  Similarity=0.165  Sum_probs=51.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      .++|.|+ |.+|.++++.|.+.|+.|++++++.+..+...+.       ..+.++.+|.++.+.++++      ...+.|
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~------~~~~a~   67 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLREA------GAEDAD   67 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHHc------CCCcCC
Confidence            5788887 9999999999999999999999988765543321       1366677788776654443      112456


Q ss_pred             EEEEcCC
Q 023438          113 ILINNAG  119 (282)
Q Consensus       113 ~vi~~ag  119 (282)
                      .+|.+.+
T Consensus        68 ~vi~~~~   74 (453)
T PRK09496         68 LLIAVTD   74 (453)
T ss_pred             EEEEecC
Confidence            6666554

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.69  E-value=0.014  Score=51.21  Aligned_cols=79  Identities=19%  Similarity=0.283  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++|+|+++++|.++++.+...|++|+++.++.+..+.. .++     +.+  . ..+..+.+....+.+.. . ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-~~~~~~~~~~~~~~~~~-~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GAD--I-AINYREEDFVEVVKAET-G-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc--E-EEecCchhHHHHHHHHc-C-CC
Confidence            578999999999999999999999999999999887664432 222     211  1 12333333333333322 1 13


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.69  E-value=0.012  Score=54.58  Aligned_cols=76  Identities=18%  Similarity=0.394  Sum_probs=53.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ |.+|..+++.|...| .+|++++|+.+......+++     +.  ..+.     .+++.+.+.    
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~--~~i~-----~~~l~~~l~----  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GG--EAVK-----FEDLEEYLA----  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CC--eEee-----HHHHHHHHh----
Confidence            478899999997 999999999999999 68999999987765554433     11  1121     123333332    


Q ss_pred             cCCCccEEEEcCCCCCC
Q 023438          107 QHHQLNILINNAGIMGT  123 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~  123 (282)
                         ..|+||.+.+...+
T Consensus       240 ---~aDvVi~aT~s~~~  253 (417)
T TIGR01035       240 ---EADIVISSTGAPHP  253 (417)
T ss_pred             ---hCCEEEECCCCCCc
Confidence               56888888875444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN02602 lactate dehydrogenase

Probab=96.69  E-value=0.061  Score=48.59  Aligned_cols=117  Identities=12%  Similarity=0.088  Sum_probs=74.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.+.|+|+ |.+|.++|..|+..|.  ++++++.+++.+.....++....+- ..+ -+..+ .+.+       .    .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~-------~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA-------V----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH-------H----h
Confidence            68999996 9999999999998885  7999999988777777776654210 011 11111 1211       1    1


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .+-|++|.+||....+. .+..   +.+.    ....+++.+.+.+.+.    ++.+.++++|.-.
T Consensus       104 ~daDiVVitAG~~~k~g-~tR~---dll~----~N~~I~~~i~~~I~~~----~p~~ivivvtNPv  157 (350)
T PLN02602        104 AGSDLCIVTAGARQIPG-ESRL---NLLQ----RNVALFRKIIPELAKY----SPDTILLIVSNPV  157 (350)
T ss_pred             CCCCEEEECCCCCCCcC-CCHH---HHHH----HHHHHHHHHHHHHHHH----CCCeEEEEecCch
Confidence            37799999999754432 2222   2233    3444567777777665    2467888888643

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.68  E-value=0.015  Score=53.47  Aligned_cols=64  Identities=27%  Similarity=0.361  Sum_probs=47.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.-                   +.+...+.+.+.+|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            47789999998 8999999999999998 7888875521                   2334455666666666676666


Q ss_pred             ccCCC
Q 023438           89 LDLSS   93 (282)
Q Consensus        89 ~Dvs~   93 (282)
                      ..++.
T Consensus       119 ~~i~~  123 (392)
T PRK07878        119 FRLDP  123 (392)
T ss_pred             ccCCh
Confidence            66653

>PRK14851 hypothetical protein; Provisional

Probab=96.65  E-value=0.015  Score=56.93  Aligned_cols=82  Identities=11%  Similarity=0.197  Sum_probs=59.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.=                   +.+...+.+.+.+|..++..+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            367899999996 8999999999999998 7888874422                   233456666677777788888


Q ss_pred             EccCCCHHHHHHHHHHHHhcCCCccEEEEcC
Q 023438           88 ELDLSSLASVRNFASEYNIQHHQLNILINNA  118 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~a  118 (282)
                      ...++. +.+..+++       .+|+||.+.
T Consensus       119 ~~~i~~-~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        119 PAGINA-DNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             ecCCCh-HHHHHHHh-------CCCEEEECC
Confidence            877763 44444443       467777554

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.64  E-value=0.016  Score=51.44  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=67.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcCh--hhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDI--AAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~--~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++.|+|++|.+|..++..|+..|.  +|++++++.  +.+......+.+...  +...   ....+.  +.+    .  
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d~~----~--   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISS--DLS----D--   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECC--CHH----H--
Confidence            3689999999999999999999986  599999954  444333333332211  1011   111111  111    1  


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                        ..+.|++|.++|...... .+.   .+.++.|+.    +++.+.+.+.+..    +.+.+|++++.
T Consensus        70 --l~~aDiViitag~p~~~~-~~r---~dl~~~n~~----i~~~~~~~i~~~~----~~~~viv~~np  123 (309)
T cd05294          70 --VAGSDIVIITAGVPRKEG-MSR---LDLAKKNAK----IVKKYAKQIAEFA----PDTKILVVTNP  123 (309)
T ss_pred             --hCCCCEEEEecCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHHC----CCeEEEEeCCc
Confidence              237799999999754321 222   223344443    4555555555432    35678888873

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.63  E-value=0.013  Score=52.08  Aligned_cols=72  Identities=21%  Similarity=0.427  Sum_probs=51.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +.+++++|.|+ |.+|..+++.|.+.|. +|++++|+.++..+..+++     +.  .++     +.+++...+.     
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~-----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN-----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh-----
Confidence            67899999988 9999999999998775 7999999987766655543     22  111     2233333322     


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                        +.|++|.+.+.
T Consensus       238 --~aDvVi~at~~  248 (311)
T cd05213         238 --EADVVISATGA  248 (311)
T ss_pred             --cCCEEEECCCC
Confidence              56999999885

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.62  E-value=0.01  Score=52.54  Aligned_cols=79  Identities=18%  Similarity=0.255  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.+++|.|+++++|.++++.+.+.|++|+.++++.+..+...+.+     +.. .+  .|..+.+..+. +.+..  .+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~--~~~~~~~~~~~-v~~~~--~~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AA--INYKTPDLAEA-LKEAA--PD  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eE--EecCChhHHHH-HHHhc--cC
Confidence            5789999999999999999999999999999988876544432212     211 11  23333332222 22222  14


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            6999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.62  E-value=0.1  Score=44.47  Aligned_cols=160  Identities=14%  Similarity=0.195  Sum_probs=93.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.++||--|.||+|..+++.+...|+++|....+.++.+...+     + +  ++ +..|.+.++-+++ +..+. ...
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-----n-G--~~-h~I~y~~eD~v~~-V~kiT-ngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-----N-G--AE-HPIDYSTEDYVDE-VKKIT-NGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-----c-C--Cc-ceeeccchhHHHH-HHhcc-CCC
Confidence            47899999999999999999999999999998877665444332     2 2  11 3346666443333 33332 123


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC--CccccC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~--~~~~~~  187 (282)
                      .+|++.-..|..         .+..               -+..|+       +.|.+|.++.+++...+..  .++...
T Consensus       215 GVd~vyDsvG~d---------t~~~---------------sl~~Lk-------~~G~mVSfG~asgl~~p~~l~~ls~k~  263 (336)
T KOG1197|consen  215 GVDAVYDSVGKD---------TFAK---------------SLAALK-------PMGKMVSFGNASGLIDPIPLNQLSPKA  263 (336)
T ss_pred             Cceeeeccccch---------hhHH---------------HHHHhc-------cCceEEEeccccCCCCCeehhhcChhh
Confidence            588888777731         1111               122333       3689998888776653221  111111


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG  233 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg  233 (282)
                      +.  .-.|....|-....-+...+.-+-.+......+++++.+.|-
T Consensus       264 l~--lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  264 LQ--LVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hh--hccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence            11  111233456555555555444444444444556899888884

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.60  E-value=0.013  Score=43.70  Aligned_cols=71  Identities=20%  Similarity=0.264  Sum_probs=52.2

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccE
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~  113 (282)
                      ++|.|. +.+|..+++.|.+.+.+|++++++++..+...    +.    .+.++.+|.++++.++++-  +    .+.+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~----~~~~i~gd~~~~~~l~~a~--i----~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EE----GVEVIYGDATDPEVLERAG--I----EKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HT----TSEEEES-TTSHHHHHHTT--G----GCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hc----ccccccccchhhhHHhhcC--c----cccCE
Confidence            567787 58999999999997779999999987744443    22    3778999999988777651  1    26677


Q ss_pred             EEEcCC
Q 023438          114 LINNAG  119 (282)
Q Consensus       114 vi~~ag  119 (282)
                      ++....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            777765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.59  E-value=0.016  Score=51.40  Aligned_cols=117  Identities=14%  Similarity=0.154  Sum_probs=68.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.|+|++|.+|.++|..|+..|.  +++++|.++  ......++.....  .+....+.  +.++.       .+.+.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~--~~~i~~~~--~~~~~-------~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPT--AASVKGFS--GEEGL-------ENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCc--CceEEEec--CCCch-------HHHcCC
Confidence            378999999999999999998885  799999876  2222222222110  01111000  00011       122347


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .|++|.+||....+. .+   -.+.+..|+.    +++...+.+.+.    ++.+.++++|.-.
T Consensus        68 aDivvitaG~~~~~g-~~---R~dll~~N~~----I~~~i~~~i~~~----~p~~iiivvsNPv  119 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG-MT---RDDLFNVNAG----IVKDLVAAVAES----CPKAMILVITNPV  119 (312)
T ss_pred             CCEEEEeCCCCCCCC-cc---HHHHHHHhHH----HHHHHHHHHHHh----CCCeEEEEecCch
Confidence            899999999754321 12   2233555554    677777777765    2467788888744

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.59  E-value=0.0062  Score=57.37  Aligned_cols=47  Identities=21%  Similarity=0.246  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~   74 (282)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.++..++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            4578899999996 7999999999999999999999998776555443

>PLN00203 glutamyl-tRNA reductase

Probab=96.59  E-value=0.015  Score=55.15  Aligned_cols=79  Identities=15%  Similarity=0.227  Sum_probs=54.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ |.+|.++++.|...|+ +|+++.|+.+..+...+++    ++..+.+.  ++   ++....+     
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~~--~~---~dl~~al-----  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIYK--PL---DEMLACA-----  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEee--cH---hhHHHHH-----
Confidence            378999999999 9999999999999997 7999999988766655443    22222221  22   2222222     


Q ss_pred             cCCCccEEEEcCCCCCC
Q 023438          107 QHHQLNILINNAGIMGT  123 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~  123 (282)
                        ...|+||.+.+...+
T Consensus       328 --~~aDVVIsAT~s~~p  342 (519)
T PLN00203        328 --AEADVVFTSTSSETP  342 (519)
T ss_pred             --hcCCEEEEccCCCCC
Confidence              256899988875544

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.55  E-value=0.024  Score=53.44  Aligned_cols=78  Identities=14%  Similarity=0.091  Sum_probs=52.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++++++++|.|+ |++|.++|+.|++.|++|.+++++.. ......+.+.+.    .+.++..+-..           
T Consensus        11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~-----------   74 (480)
T PRK01438         11 HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT-----------   74 (480)
T ss_pred             ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc-----------
Confidence            34567899999997 88999999999999999999986543 223333444332    34444332211           


Q ss_pred             HhcCCCccEEEEcCCCC
Q 023438          105 NIQHHQLNILINNAGIM  121 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~  121 (282)
                        ....+|.||.+.|+.
T Consensus        75 --~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 --LPEDTDLVVTSPGWR   89 (480)
T ss_pred             --ccCCCCEEEECCCcC
Confidence              012578999999974

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.52  E-value=0.05  Score=48.63  Aligned_cols=116  Identities=15%  Similarity=0.087  Sum_probs=70.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcCh--hhHHHHHHHHHHhC-CC-CceeEEEccCCCHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~--~~~~~~~~~l~~~~-~~-~~v~~~~~Dvs~~~~i~~~  100 (282)
                      -.+.|+|++|.+|.++|..|...|.       +++++|.++  +.+.....++.... +. ..+. +..  .+       
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~-------   73 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DP-------   73 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--Ch-------
Confidence            3789999999999999999998884       799999864  33555555554332 10 0111 100  11       


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                          .+...+-|+||.+||....+. .+..   +.++.|.    .+++.+.+.+.+..+   +.+.++++|.
T Consensus        74 ----~~~~~daDvVVitAG~~~k~g-~tR~---dll~~Na----~i~~~i~~~i~~~~~---~~~iiivvsN  130 (323)
T TIGR01759        74 ----EEAFKDVDAALLVGAFPRKPG-MERA---DLLSKNG----KIFKEQGKALNKVAK---KDVKVLVVGN  130 (323)
T ss_pred             ----HHHhCCCCEEEEeCCCCCCCC-CcHH---HHHHHHH----HHHHHHHHHHHhhCC---CCeEEEEeCC
Confidence                112236799999999754432 2322   2344444    456777777776521   1567777775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.52  E-value=0.032  Score=52.71  Aligned_cols=83  Identities=18%  Similarity=0.169  Sum_probs=56.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-------------HH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-------------LA   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-------------~~   95 (282)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++...++... ++     +  ..++..|..+             .+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-----G--a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-----G--AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----C--CeEEeccccccccccccceeecCHH
Confidence            34589999997 99999999999999999999999877644322 22     2  2334444321             23


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      ..+...+.+.+...+.|++|+++-+
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECccc
Confidence            3444444444455679999999954

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.52  E-value=0.054  Score=50.30  Aligned_cols=117  Identities=14%  Similarity=0.099  Sum_probs=76.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc-------CC--EEEEEEcChhhHHHHHHHHHHhC-CC-CceeEEEccCCCHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALR-------GV--HVVMGVRDIAAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~-------G~--~Vii~~r~~~~~~~~~~~l~~~~-~~-~~v~~~~~Dvs~~~~i~~~  100 (282)
                      -++.|+|++|.+|.++|-.|+..       |.  ++++++++.+.++....++.... +- .++.+. .  .+.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHH-----
Confidence            37999999999999999999988       65  79999999999888888887643 11 111111 1  1211     


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                            .+.+.|++|..||....+. .+-.   +.++.|.    .+++...+.+.+..   ++.+.||.+|.-
T Consensus       173 ------~~kdaDiVVitAG~prkpG-~tR~---dLl~~N~----~I~k~i~~~I~~~a---~p~~ivIVVsNP  228 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPRGPG-MERA---DLLDING----QIFAEQGKALNEVA---SRNVKVIVVGNP  228 (444)
T ss_pred             ------HhCcCCEEEECCCCCCCCC-CCHH---HHHHHHH----HHHHHHHHHHHHhc---CCCeEEEEcCCc
Confidence                  2247899999999754432 2222   2344444    45667777776620   246778877763

>PRK14968 putative methyltransferase; Provisional

Probab=96.51  E-value=0.073  Score=43.09  Aligned_cols=79  Identities=22%  Similarity=0.158  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++|-.|++.|.   ++..+++.+.+|+.++.++...+...+.+...... .++.++.+|+.+.         ... 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            367889999977665   45555556889999999988777776666543211 1277888887542         111 


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                       ..+|.++.|....
T Consensus        89 -~~~d~vi~n~p~~  101 (188)
T PRK14968         89 -DKFDVILFNPPYL  101 (188)
T ss_pred             -cCceEEEECCCcC
Confidence             2689999988754

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.49  E-value=0.021  Score=50.17  Aligned_cols=79  Identities=14%  Similarity=0.237  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++|+|+++++|.++++.+...|++|+.++++.+..+.. .++     +.. ..+  |....+....+.+...  ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~~~~~~~~~~~~--~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GAA-HVI--VTDEEDLVAEVLRITG--GK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EEE--ecCCccHHHHHHHHhC--CC
Confidence            578999999999999999999999999999999887654443 221     211 112  2222222222322221  22


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++++++|
T Consensus       213 ~~d~vi~~~~  222 (328)
T cd08268         213 GVDVVFDPVG  222 (328)
T ss_pred             CceEEEECCc
Confidence            5899999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.48  E-value=0.018  Score=53.73  Aligned_cols=78  Identities=15%  Similarity=0.177  Sum_probs=58.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ...+.++|.|+ |.+|..+++.|.+.|++|++++++++..+...++    .  ..+..+.+|.++.+.++++-      .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~--~~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----L--PNTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----C--CCCeEEECCCCCHHHHHhcC------C
Confidence            34688999999 9999999999999999999999998765544332    2  24667889999987665431      2


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      .+.|.+|.+.+
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            35677776654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.45  E-value=0.022  Score=50.33  Aligned_cols=40  Identities=33%  Similarity=0.409  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      .++.+++++|.|. |++|+.++..|...|++|.+++|+.+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4578999999998 789999999999999999999999654

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.44  E-value=0.024  Score=49.73  Aligned_cols=77  Identities=22%  Similarity=0.291  Sum_probs=54.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+.=                   +.+.+.+.+.+.+|+.++..+..++.
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            3788885 8999999999999998 6888874421                   33445566667777777888877776


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +.+  ..       .+.++|+||.+..
T Consensus        80 ~~~--~~-------f~~~fdvVi~alD   97 (291)
T cd01488          80 DKD--EE-------FYRQFNIIICGLD   97 (291)
T ss_pred             chh--HH-------HhcCCCEEEECCC
Confidence            532  11       1246788887643

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.44  E-value=0.032  Score=49.06  Aligned_cols=74  Identities=12%  Similarity=0.158  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC-CHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~~i~~~~~~i~~~~  108 (282)
                      -|+++-|+|++| +|.--++..-+.|++|+.++++..+-++..+.|     +...  + .|.+ |++.++.+.+.     
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~--f-v~~~~d~d~~~~~~~~-----  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADV--F-VDSTEDPDIMKAIMKT-----  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Ccce--e-EEecCCHHHHHHHHHh-----
Confidence            689999999977 998777777788999999999987777777766     3332  2 3666 66666666664     


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                        .|.+++++.
T Consensus       247 --~dg~~~~v~  255 (360)
T KOG0023|consen  247 --TDGGIDTVS  255 (360)
T ss_pred             --hcCcceeee
Confidence              356666665

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.44  E-value=0.058  Score=48.39  Aligned_cols=89  Identities=15%  Similarity=0.135  Sum_probs=56.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH---HHHHHhCCCCceeEEEccCCCHHHHHHHH-H
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFA-S  102 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~---~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~-~  102 (282)
                      ..++|+++.|.|. |.||.++|+.|...|++|+..+++........   ..+.+.....++..+.+-.+..  ...++ +
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~--t~~li~~  218 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE--SYHLFDK  218 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH--HHHHHhH
Confidence            4689999999987 78999999999999999999998865432211   1223333344566666665542  23333 2


Q ss_pred             HHHhcCCCccEEEEcCC
Q 023438          103 EYNIQHHQLNILINNAG  119 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag  119 (282)
                      ...... +.+.++-|+|
T Consensus       219 ~~l~~m-k~gavlIN~a  234 (330)
T PRK12480        219 AMFDHV-KKGAILVNAA  234 (330)
T ss_pred             HHHhcC-CCCcEEEEcC
Confidence            332332 3455666665

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.43  E-value=0.024  Score=50.89  Aligned_cols=75  Identities=12%  Similarity=0.171  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++++|+|+ |++|...++.+...|+ +|++++++.++++.. +++     +...   ..|..+. ++.++.    ...
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~-~~~~~~----~~~  233 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADK---LVNPQND-DLDHYK----AEK  233 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcE---EecCCcc-cHHHHh----ccC
Confidence            5889999986 8999999998888998 588889887765433 222     3221   1244332 233222    223


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      +.+|+++.++|
T Consensus       234 g~~D~vid~~G  244 (343)
T PRK09880        234 GYFDVSFEVSG  244 (343)
T ss_pred             CCCCEEEECCC
Confidence            46999999998

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.42  E-value=0.015  Score=56.00  Aligned_cols=61  Identities=23%  Similarity=0.335  Sum_probs=45.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh----------------------hHHHHHHHHHHhCCCCcee
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA----------------------AGKDVKETIVKEIPSAKVD   85 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~----------------------~~~~~~~~l~~~~~~~~v~   85 (282)
                      +++.+++|.|+ ||+|..+|+.|+..|. ++++++.+.=                      +.+.+.+.+++.+|+.++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            56889999998 9999999999999998 7888874421                      2234455566666666666


Q ss_pred             EEEcc
Q 023438           86 AMELD   90 (282)
Q Consensus        86 ~~~~D   90 (282)
                      .+...
T Consensus       415 ~~~~~  419 (664)
T TIGR01381       415 GHRLT  419 (664)
T ss_pred             Eeeee
Confidence            66555

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.36  E-value=0.026  Score=49.78  Aligned_cols=79  Identities=18%  Similarity=0.245  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.+..+.. +++     +..  . ..|..+.+..+.+.+..  ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-~~~~~~~~~~~~~~~~~--~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD--V-AVDYTRPDWPDQVREAL--GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC--E-EEecCCccHHHHHHHHc--CCC
Confidence            478999999999999999999999999999998887664433 222     221  1 12444433333332221  123


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.35  E-value=0.023  Score=57.96  Aligned_cols=78  Identities=22%  Similarity=0.317  Sum_probs=60.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC-CE-------------EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG-VH-------------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G-~~-------------Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      -+.|.++|.|+ |.||..+|+.|++.. ++             |.+++++.+.++...+.    ++  ++.+++.|++|.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~----~~--~~~~v~lDv~D~  639 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG----IE--NAEAVQLDVSDS  639 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh----cC--CCceEEeecCCH
Confidence            35689999997 999999999999753 34             88888887765554433    32  467889999998


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      +++.++++       ++|+||++...
T Consensus       640 e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc-------CCCEEEECCCc
Confidence            88777655       47999999874

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.33  E-value=0.013  Score=45.68  Aligned_cols=40  Identities=20%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..+++||.++|.|.|.-+|+.++..|.++|++|.++.++.
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            4689999999999999999999999999999999987654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.27  E-value=0.091  Score=44.45  Aligned_cols=37  Identities=22%  Similarity=0.259  Sum_probs=32.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA   66 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~   66 (282)
                      +++..++|.|. ||+|.-+++.|++.|. ++.+++-+.=
T Consensus        28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v   65 (263)
T COG1179          28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDV   65 (263)
T ss_pred             HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccc
Confidence            67889999998 8999999999999998 7888886543

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.26  E-value=0.19  Score=44.87  Aligned_cols=122  Identities=13%  Similarity=0.126  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC--CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.+++.|+|+ |.+|..+|..++..|. +|++++.+++.+......+....  .+.......  -+|.+       .+  
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-------~l--   72 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-------DI--   72 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-------Hh--
Confidence            4578999995 8899999999999995 89999998876432222222111  011111111  02211       12  


Q ss_pred             cCCCccEEEEcCCCCCCCC--cCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          107 QHHQLNILINNAGIMGTPF--MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                        .+-|+||.++|......  +.++.. .+.+..|+    .+.+.+.+.+.+..    +.+.++++|...
T Consensus        73 --~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~----p~a~~iv~sNP~  131 (321)
T PTZ00082         73 --AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYC----PNAFVIVITNPL  131 (321)
T ss_pred             --CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecCcH
Confidence              26799999999754322  122222 33344453    35667777776652    355777777644

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.22  E-value=0.041  Score=45.75  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ++++||.++|.|| |.+|...++.|.+.|++|.+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999999999 9999999999999999999998753

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.22  E-value=0.086  Score=42.12  Aligned_cols=87  Identities=17%  Similarity=0.133  Sum_probs=56.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-----CCceeEEEccCCCHHHHHHHHHH--H
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFASE--Y  104 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-----~~~v~~~~~Dvs~~~~i~~~~~~--i  104 (282)
                      +++-++|- |-+|..+|+.|++.|++|.+.+|+.+..++..++-.....     -..+..+..=+.+.++++.++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46778887 8999999999999999999999998887665532100000     01234555567888888888887  6


Q ss_pred             HhcCCCccEEEEcCC
Q 023438          105 NIQHHQLNILINNAG  119 (282)
Q Consensus       105 ~~~~g~id~vi~~ag  119 (282)
                      .....+=.++|.+..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            555434455555543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14852 hypothetical protein; Provisional

Probab=96.20  E-value=0.035  Score=55.98  Aligned_cols=82  Identities=13%  Similarity=0.210  Sum_probs=58.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|. ||+|..+++.|+..|. ++.++|.+.=                   +.+...+.+.+.+|..++..+.
T Consensus       330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            67889999996 8999999999999998 7888875422                   3344566666777777777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..++. +.++.+++       .+|+||.+.-
T Consensus       409 ~~I~~-en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        409 EGVAA-ETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             cCCCH-HHHHHHhh-------CCCEEEECCC
Confidence            77643 44444443       5677776553

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.19  E-value=0.053  Score=48.21  Aligned_cols=90  Identities=14%  Similarity=0.061  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH-----HHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD-----VKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~-----~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ..++|+++.|.|- |.||+++|+.|...|++|+..+++.+....     ...++.+..+..++..+.+-.+.  +...++
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~li  208 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGII  208 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHHh
Confidence            4678999999987 899999999999999999999886543210     01122222224455555555553  445554


Q ss_pred             HH-HHhcCCCccEEEEcCCC
Q 023438          102 SE-YNIQHHQLNILINNAGI  120 (282)
Q Consensus       102 ~~-i~~~~g~id~vi~~ag~  120 (282)
                      +. .-... +.+.++.|.|-
T Consensus       209 ~~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        209 NQQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             HHHHHhcC-CCCcEEEECCC
Confidence            42 22222 34556666653

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.18  E-value=0.025  Score=49.67  Aligned_cols=31  Identities=29%  Similarity=0.411  Sum_probs=26.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRD   64 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~   64 (282)
                      +++|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3678877 8999999999999998 78888744

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.17  E-value=0.037  Score=49.45  Aligned_cols=77  Identities=14%  Similarity=0.116  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|..+++.+...|++ |++++++.++.+.. +++     +..   ...|..+.+ .+.+.+..  ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~~~~--~~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIRELT--SG  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHHHHh--CC
Confidence            4889999986 89999999999999998 99988887664433 333     322   113444433 33332221  11


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      ..+|+++.+.|
T Consensus       230 ~~~d~vid~~g  240 (339)
T cd08239         230 AGADVAIECSG  240 (339)
T ss_pred             CCCCEEEECCC
Confidence            26899999988

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.16  E-value=0.054  Score=46.90  Aligned_cols=176  Identities=14%  Similarity=0.101  Sum_probs=99.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcCh-------hhH----HHHHHHHHHhCCCCceeEEEccCCCHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDI-------AAG----KDVKETIVKEIPSAKVDAMELDLSSLASVR   98 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~-------~~~----~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~   98 (282)
                      .|++||.|+|+|.|++.-..++= .|++.+-+.-..       ...    ....++..++ .+-...-+..|.=+.|.-+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~-kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ-KGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh-cCceeeecccchhhHHHHH
Confidence            38999999999999885443331 566655543211       111    1122222222 1333444667888778788


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCC--CC---------------------c-------------CChhhHHHHHHHHHHH
Q 023438           99 NFASEYNIQHHQLNILINNAGIMGT--PF---------------------M-------------LSKDNIELQFATNHLG  142 (282)
Q Consensus        99 ~~~~~i~~~~g~id~vi~~ag~~~~--~~---------------------~-------------~~~~~~~~~~~~n~~~  142 (282)
                      ..++.|+..+|++|.+|++-+....  +.                     +             .+.+++.....  ++|
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VMG  197 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VMG  197 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hhC
Confidence            8999999999999999887653210  00                     0             12333333322  222


Q ss_pred             HH---HHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          143 HF---LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       143 ~~---~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                      --   ..+.+++..-     ....+.+.+.+|-.+....             .+....+..+.+|.-++.-+..+...++
T Consensus       198 GeDWq~WidaLl~ad-----vlaeg~kTiAfsYiG~~iT-------------~~IYw~GtiG~AK~DLd~~~~~inekLa  259 (398)
T COG3007         198 GEDWQMWIDALLEAD-----VLAEGAKTIAFSYIGEKIT-------------HPIYWDGTIGRAKKDLDQKSLAINEKLA  259 (398)
T ss_pred             cchHHHHHHHHHhcc-----ccccCceEEEEEecCCccc-------------cceeeccccchhhhcHHHHHHHHHHHHH
Confidence            11   1233333221     1113455665554332221             1345567889999999999999999998


Q ss_pred             cCCCcEEE
Q 023438          220 EDGVDITA  227 (282)
Q Consensus       220 ~~g~~i~v  227 (282)
                      ..|..-+|
T Consensus       260 ~~gG~A~v  267 (398)
T COG3007         260 ALGGGARV  267 (398)
T ss_pred             hcCCCeee
Confidence            87643443

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.16  E-value=0.024  Score=50.08  Aligned_cols=42  Identities=31%  Similarity=0.394  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .+++++|.|+++++|.++++.+...|++|+.++++.++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999999999999999887664443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.15  E-value=0.048  Score=41.56  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             EEEEecCCChhHHHHHHHHHH-cCCEEE-EEEcChhhH------------------HHHHHHHHHhCCCCceeEEEccCC
Q 023438           33 TAIVTGATSGIGTETARVLAL-RGVHVV-MGVRDIAAG------------------KDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~-~G~~Vi-i~~r~~~~~------------------~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      +++|.|++|-+|+.+++.+.+ .|++++ .++|+.+..                  ....+++.+.     +. +..|.|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D-VvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD-VVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S-EEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC-EEEEcC
Confidence            589999999999999999998 777754 556665100                  0112222222     11 556999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      .++.+...++.+.+.  +..+|+-+.|+
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999988887766  67888999885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK05442 malate dehydrogenase; Provisional

Probab=96.12  E-value=0.079  Score=47.42  Aligned_cols=116  Identities=16%  Similarity=0.107  Sum_probs=68.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcChh--hHHHHHHHHHHhC-CC-CceeEEEccCCCHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~~--~~~~~~~~l~~~~-~~-~~v~~~~~Dvs~~~~i~~~  100 (282)
                      +.+.|+|++|.+|.++|..|+..|.       +++++|.++.  .+.....++.... +. .++..     +.       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~~-------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----TD-------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----ec-------
Confidence            5899999999999999999998764       6999998542  2333333333321 10 01111     10       


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                        ...+...+-|++|.+||....+. .+..   +.+..|.    .+++.+.+.+.+..+   +.+.++++|.
T Consensus        73 --~~y~~~~daDiVVitaG~~~k~g-~tR~---dll~~Na----~i~~~i~~~i~~~~~---~~~iiivvsN  131 (326)
T PRK05442         73 --DPNVAFKDADVALLVGARPRGPG-MERK---DLLEANG----AIFTAQGKALNEVAA---RDVKVLVVGN  131 (326)
T ss_pred             --ChHHHhCCCCEEEEeCCCCCCCC-CcHH---HHHHHHH----HHHHHHHHHHHHhCC---CCeEEEEeCC
Confidence              11122347899999999754432 2322   2344443    457777777776421   2567777776

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.12  E-value=0.068  Score=49.84  Aligned_cols=39  Identities=36%  Similarity=0.539  Sum_probs=34.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      ++.|+||+|.+|.++|+.|.+.|++|++.+|+.+...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999987665443

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.12  E-value=0.022  Score=50.72  Aligned_cols=90  Identities=16%  Similarity=0.221  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|...........+.+..+..++..+.+-++...  ..++++-.-
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T--~~li~~~~~  220 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHT--RHLIGAREL  220 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHH--hcCcCHHHH
Confidence            4689999999998 9999999999999999999888753211000011222222345666666666432  333332111


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ..-+.+.++-|.|
T Consensus       221 ~~mk~ga~lIN~a  233 (317)
T PRK06487        221 ALMKPGALLINTA  233 (317)
T ss_pred             hcCCCCeEEEECC
Confidence            1114455555555

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.12  E-value=0.036  Score=46.90  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcC
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRD   64 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~   64 (282)
                      .++++++++|.|+ |+.|.+++..|.+.|.   ++++++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4688999999999 9999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.11  E-value=0.13  Score=45.52  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=72.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           34 AIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +.|.|+ |++|.++|..|+..|  .++++++.+.+.+.....++...... ........  .+.       +.+    .+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~~l----~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------ADA----AD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------HHh----CC
Confidence            357887 689999999999999  58999999988887777777654321 11111111  111       122    36


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      -|++|.++|...... .+..   +.+.    ...-+++.+.+.+.+..    +.+.++++|.-.
T Consensus        67 aDiVIitag~p~~~~-~~R~---~l~~----~n~~i~~~~~~~i~~~~----p~~~viv~sNP~  118 (300)
T cd00300          67 ADIVVITAGAPRKPG-ETRL---DLIN----RNAPILRSVITNLKKYG----PDAIILVVSNPV  118 (300)
T ss_pred             CCEEEEcCCCCCCCC-CCHH---HHHH----HHHHHHHHHHHHHHHhC----CCeEEEEccChH
Confidence            799999999754322 1222   2233    34445777777777652    467888888643

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.10  E-value=0.028  Score=43.05  Aligned_cols=89  Identities=21%  Similarity=0.237  Sum_probs=54.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhC----C--CCceeEEEccCCCHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEI----P--SAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~----~--~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .-++-|+|+ |-+|.++++.|.+.|+.|..+ +|+..+.+...+.+....    .  -.....+.+-+.| +.|..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            357889998 999999999999999998766 577666555544432110    0  0123334445555 479999999


Q ss_pred             HHhc--CCCccEEEEcCCCC
Q 023438          104 YNIQ--HHQLNILINNAGIM  121 (282)
Q Consensus       104 i~~~--~g~id~vi~~ag~~  121 (282)
                      +...  ..+=.+|+||.|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8765  33336999999954

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.09  E-value=0.049  Score=45.36  Aligned_cols=59  Identities=12%  Similarity=0.219  Sum_probs=43.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      ++++|+.++|.|| |.+|..-++.|++.|++|.+++.+..   +..+++.+.   .++.++.-+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~---~~i~~~~~~~~   63 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQ---GGITWLARCFD   63 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHc---CCEEEEeCCCC
Confidence            5689999999998 88999999999999999999987643   222333332   25666666554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.07  E-value=0.061  Score=48.84  Aligned_cols=79  Identities=14%  Similarity=0.087  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |+||...+..+...|+ +|+.++++.++++.. +++     +...   ..|..+ .+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence            4789999985 9999999998889998 799998887765544 222     3221   124332 2233333333322 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|+++.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             368999999983

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.05  E-value=0.13  Score=45.45  Aligned_cols=118  Identities=16%  Similarity=0.240  Sum_probs=72.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCC-ceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~-~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.+.|+|+ |+||.++|..|+..+.  ++++++..++..+....++.....-. .-..+..| .+.       +.    .
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y-------~~----~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY-------ED----L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh-------hh----h
Confidence            36889999 9999999999988774  79999999776666665554422110 00111222 111       11    2


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .+.|+++.+||..+.+- .+-+++   ++.|.    .+.+.+.+.+.+..    +.+.|+.+|.-.
T Consensus        68 ~~aDiVvitAG~prKpG-mtR~DL---l~~Na----~I~~~i~~~i~~~~----~d~ivlVvtNPv  121 (313)
T COG0039          68 KGADIVVITAGVPRKPG-MTRLDL---LEKNA----KIVKDIAKAIAKYA----PDAIVLVVTNPV  121 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-CCHHHH---HHhhH----HHHHHHHHHHHhhC----CCeEEEEecCcH
Confidence            36799999999876543 233332   44444    34566666666542    356777777643

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.05  E-value=0.023  Score=46.29  Aligned_cols=44  Identities=25%  Similarity=0.293  Sum_probs=37.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~   77 (282)
                      +|.|.|+ |.+|..||..++..|++|.+.+++.+.++...+.+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999999988777776654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.04  E-value=0.062  Score=48.32  Aligned_cols=41  Identities=27%  Similarity=0.213  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .|.+++|.|+ |++|..+++.+...|++|++++++.++.+..
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999999999999999999887765543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK07877 hypothetical protein; Provisional

Probab=96.03  E-value=0.041  Score=54.23  Aligned_cols=81  Identities=21%  Similarity=0.250  Sum_probs=59.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChh------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIA------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|. | +|..++..|+..|.  +++++|.+.=                  +.+...+.+.+.+|..++..+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            67899999999 4 99999999999993  8999875522                  3344566677777777888888


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      ..++ .+.++.+++       +.|+||.|.-
T Consensus       183 ~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        183 DGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             ccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            7777 355555543       4577766654

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.02  E-value=0.053  Score=47.51  Aligned_cols=61  Identities=20%  Similarity=0.251  Sum_probs=45.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      |++.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+.                   .+.+...+.+.+.+|..++..+.
T Consensus        17 L~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~   95 (286)
T cd01491          17 LQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST   95 (286)
T ss_pred             HhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence            67789999988 8999999999999998 688887542                   23344555666666666666665


Q ss_pred             cc
Q 023438           89 LD   90 (282)
Q Consensus        89 ~D   90 (282)
                      .+
T Consensus        96 ~~   97 (286)
T cd01491          96 GP   97 (286)
T ss_pred             cc
Confidence            44

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.00  E-value=0.056  Score=47.35  Aligned_cols=76  Identities=16%  Similarity=0.239  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.+++|.|+++++|.++++.+...|++|+.+.++.+..+.. .++     +..  .+..+  .. +...-+.+.   ..
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~~~~~--~~-~~~~~i~~~---~~  207 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL-----GAD--EVVID--DG-AIAEQLRAA---PG  207 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCc--EEEec--Cc-cHHHHHHHh---CC
Confidence            578999999999999999999999999999988887654333 222     221  22112  11 222222222   23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.++.++|
T Consensus       208 ~~d~vl~~~~  217 (320)
T cd08243         208 GFDKVLELVG  217 (320)
T ss_pred             CceEEEECCC
Confidence            6999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.00  E-value=0.06  Score=49.79  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=37.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~   68 (282)
                      +..+.|++++|+|. |.||+.+|+.|...|++|++++++..+.
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            34578999999997 7999999999999999999999887654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.99  E-value=0.042  Score=51.33  Aligned_cols=77  Identities=19%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++|+|.+ ++|.++|+.|+++|++|.+.+.+...  ...+++.+.  ...+.++.....+ .    ..      
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~--~~gi~~~~g~~~~-~----~~------   65 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKM--FDGLVFYTGRLKD-A----LD------   65 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhc--cCCcEEEeCCCCH-H----HH------
Confidence            3678999999985 99999999999999999999876542  112233321  1134444333221 1    11      


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                       .+.|.||.+.|+.
T Consensus        66 -~~~d~vv~spgi~   78 (445)
T PRK04308         66 -NGFDILALSPGIS   78 (445)
T ss_pred             -hCCCEEEECCCCC
Confidence             2578999999975

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.98  E-value=0.037  Score=49.01  Aligned_cols=78  Identities=17%  Similarity=0.304  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.+++|.|+++.+|.++++.+...|++|+.+.++.+..+.. +++     +.. ..  .|..+ ++..+.+.+...  +
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v--~~~~~-~~~~~~~~~~~~--~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RP--INYKT-EDLGEVLKKEYP--K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eE--EeCCC-ccHHHHHHHhcC--C
Confidence            578999999999999999999999999999988876654433 222     221 11  23222 223333333222  3


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.95  E-value=0.033  Score=49.14  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+++++|.++++.+...|++++++.++.+..+...    + . +.. .++  +..+.+ ..+.+.+... ..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~----~-~-g~~-~~~--~~~~~~-~~~~i~~~~~-~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR----A-L-GIG-PVV--STEQPG-WQDKVREAAG-GA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----h-c-CCC-EEE--cCCCch-HHHHHHHHhC-CC
Confidence            5789999999999999999999999999999888766543332    2 1 221 111  333322 2222222221 12


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       208 ~~d~v~d~~g  217 (324)
T cd08292         208 PISVALDSVG  217 (324)
T ss_pred             CCcEEEECCC
Confidence            5899999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02740 Alcohol dehydrogenase-like

Probab=95.93  E-value=0.058  Score=49.22  Aligned_cols=79  Identities=13%  Similarity=0.093  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ |+||.++++.+...|+ +|+.++++.++++.. +++     +... +  .|..+. +++.+.+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~--i~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM-----GITD-F--INPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc-----CCcE-E--EecccccchHHHHHHHHhC-
Confidence            4789999986 9999999999999999 699998887765444 222     3221 2  244332 223333333322 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|+++.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999983

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.91  E-value=0.0085  Score=44.11  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ++++|+.++|+|| |.+|..=++.|++.|++|.+++.+.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999999 9999999999999999999999886

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.91  E-value=0.026  Score=49.27  Aligned_cols=39  Identities=23%  Similarity=0.332  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++||.++|+|.|.-+|+.++..|.+.|++|.++.+.
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            346899999999999999999999999999999988764

>PLN02928 oxidoreductase family protein

Probab=95.90  E-value=0.051  Score=49.07  Aligned_cols=38  Identities=29%  Similarity=0.276  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999998 9999999999999999999998874

>PLN02494 adenosylhomocysteinase

Probab=95.89  E-value=0.047  Score=50.89  Aligned_cols=44  Identities=18%  Similarity=0.291  Sum_probs=37.7

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~   68 (282)
                      ..+..+.|++++|.|. |.||+.+|+.+...|++|++++++....
T Consensus       247 ~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        247 ATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             hcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            3345678999999998 5999999999999999999999887543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.88  E-value=0.075  Score=48.22  Aligned_cols=78  Identities=12%  Similarity=0.087  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ |++|.+.++.+...|+ .|+.++++.++.+.. +++     +... +  .|..+. +++.+.+.++.. 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD-C--VNPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE-E--EcccccchHHHHHHHHHhC-
Confidence            4789999975 8999999999999999 699999987765533 222     3221 1  244432 234444444332 


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                       +.+|+++.++|
T Consensus       255 -~g~d~vid~~g  265 (368)
T cd08300         255 -GGVDYTFECIG  265 (368)
T ss_pred             -CCCcEEEECCC
Confidence             36999999988

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.88  E-value=0.25  Score=43.91  Aligned_cols=113  Identities=17%  Similarity=0.217  Sum_probs=68.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+.|.|+ |.+|.++|..|+..|  .+|++++++.+........+....+- .......   .+.+       .    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hC
Confidence            4789998 899999999999999  58999999987766544444432110 1111111   1211       1    23


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      +.|++|.++|...... .+.   .+.+.    ....+.+.+.+.+.+.    ++.+.+++++.
T Consensus        67 ~aDiViita~~~~~~~-~~r---~dl~~----~n~~i~~~~~~~l~~~----~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKPG-ETR---LDLLK----RNVAIFKEIIPQILKY----APDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCCC-CCH---HHHHH----HHHHHHHHHHHHHHHH----CCCeEEEEecC
Confidence            7799999999643321 121   22233    3344566666666664    24577777765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.87  E-value=0.068  Score=47.04  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.+.. +++     +..   ...|..+.+....+ .+.. ...
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~-~~~~-~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD---EVIDSSPEDLAQRV-KEAT-GGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC---EEecccchhHHHHH-HHHh-cCC
Confidence            578999999999999999999999999999988887654333 222     211   11233332222222 2221 123


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6899999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.86  E-value=0.049  Score=47.57  Aligned_cols=41  Identities=22%  Similarity=0.309  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      ++.+++|+|+++++|.+++..+...|+.|+.++++.+..+.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999888765443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.85  E-value=0.33  Score=42.96  Aligned_cols=117  Identities=18%  Similarity=0.212  Sum_probs=67.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++.|+|+ |.+|..+|..++..|. +|++++++++.+.....++.....  .... .+.. -++.   +    .+    
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~-~i~~-~~d~---~----~~----   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDT-KITG-TNDY---E----DI----   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCc-EEEe-CCCH---H----HH----
Confidence            57899999 9999999999999875 999999988766544433332210  0001 1110 0111   1    11    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .+.|++|.++|...... .+.   .+.+..|    .-+.+.+.+.+.+..    +.+.+|+++...
T Consensus        69 ~~aDiVii~~~~p~~~~-~~r---~~~~~~n----~~i~~~i~~~i~~~~----~~~~viv~tNP~  122 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-MSR---DDLLGIN----AKIMKDVAEGIKKYA----PDAIVIVVTNPV  122 (307)
T ss_pred             CCCCEEEECCCCCCCcC-CCH---HHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcH
Confidence            26799999999754321 121   2223333    345566666665542    345677776643

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.83  E-value=0.043  Score=48.82  Aligned_cols=67  Identities=13%  Similarity=0.135  Sum_probs=45.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..+|.......  ....+.+.....++..+.+-++..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            5789999999998 999999999999999999999885322100  001122222234566666666653

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.83  E-value=0.059  Score=48.40  Aligned_cols=40  Identities=25%  Similarity=0.201  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            5789999999998 999999999999999999999987543

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.82  E-value=0.077  Score=48.98  Aligned_cols=89  Identities=8%  Similarity=0.042  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|.+++|.||+|++|...++.+...|+   +|++++++.++++...+.+..............|..+.+++.+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            367999999999999998887777654   79999998877655433110000000111122243332333333333221


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                       ...+|++|.++|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             225899998887

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.82  E-value=0.064  Score=48.61  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=48.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|.|+ |+||..+++.+...|++|++++.+.++..+..+++     +..  .+ .|..+.+.+.++       .+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~--~v-i~~~~~~~~~~~-------~~  246 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GAD--SF-LVSTDPEKMKAA-------IG  246 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCc--EE-EcCCCHHHHHhh-------cC
Confidence            5789999765 99999999999899999988877765544333332     322  11 233333222221       23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|.++|
T Consensus       247 ~~D~vid~~g  256 (360)
T PLN02586        247 TMDYIIDTVS  256 (360)
T ss_pred             CCCEEEECCC
Confidence            5899999888

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.81  E-value=0.096  Score=46.29  Aligned_cols=80  Identities=13%  Similarity=0.213  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+++++|.++++.+...|+.++++.++.+..+.+ .+    + +.. .+  .|..+.+...+.+.+... ..
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~-g~~-~~--~~~~~~~~~~~~~~~~~~-~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KK----L-AAI-IL--IRYPDEEGFAPKVKKLTG-EK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----c-CCc-EE--EecCChhHHHHHHHHHhC-CC
Confidence            578999999999999999999999999988888876654443 22    2 221 11  222332212222222211 23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            5899999876

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.81  E-value=0.16  Score=46.44  Aligned_cols=116  Identities=14%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-E----EEE----EEcChhhHHHHHHHHHHhC-CC-CceeEEEccCCCHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-H----VVM----GVRDIAAGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~----Vii----~~r~~~~~~~~~~~l~~~~-~~-~~v~~~~~Dvs~~~~i~~~  100 (282)
                      -++.|+|++|.+|.++|-.|+..|. .    |.+    ++++.+.++....++.... +- .++.+..   .+.      
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~y------  115 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DPY------  115 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CCH------
Confidence            4799999999999999999998874 3    444    4888888888777776643 11 1111111   111      


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                       +.    +.+.|++|.+||....+. .+..   +.++.|.    .+++...+.+.+..   ++.+.||.+|.
T Consensus       116 -~~----~kdaDIVVitAG~prkpg-~tR~---dll~~N~----~I~k~i~~~I~~~a---~~~~iviVVsN  171 (387)
T TIGR01757       116 -EV----FEDADWALLIGAKPRGPG-MERA---DLLDING----QIFADQGKALNAVA---SKNCKVLVVGN  171 (387)
T ss_pred             -HH----hCCCCEEEECCCCCCCCC-CCHH---HHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEcCC
Confidence             11    237899999999764432 2222   2344443    45667777776632   13567777776

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.75  E-value=0.058  Score=38.16  Aligned_cols=36  Identities=36%  Similarity=0.446  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEc
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVR   63 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r   63 (282)
                      .++++++++|.|. |+.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5678999999999 99999999999998 457877766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.73  E-value=0.095  Score=47.51  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ |++|...++.+...|+ +|+.++++.++.+.+ +++     +.. .+  .|..+. +++.+.+.++.. 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~--i~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EF--VNPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eE--EcccccchhHHHHHHHHhC-
Confidence            5789999985 8999999998889999 799999887664433 222     322 11  233321 234444444332 


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                       +.+|+++.+.|
T Consensus       256 -~~~d~vid~~G  266 (369)
T cd08301         256 -GGVDYSFECTG  266 (369)
T ss_pred             -CCCCEEEECCC
Confidence             26899999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.72  E-value=0.081  Score=46.04  Aligned_cols=41  Identities=22%  Similarity=0.225  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      +|.+++|.|+++++|.++++.+...|++|+.++++.++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999998887665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.67  E-value=0.073  Score=46.49  Aligned_cols=106  Identities=16%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|++|+|.+|.-+.+-..-+|++|+-++-..++..-+.+++     +-.   ...|...+ ++.+.+++..  -.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~-d~~~~L~~a~--P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAE-DFAQALKEAC--PK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCcc-cHHHHHHHHC--CC
Confidence            5899999999999998877766678999999988877755555443     211   11355554 4444444332  24


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      .||+.+-|.|-  .                      +..+.++.|..       .+||+...-++.+.
T Consensus       219 GIDvyfeNVGg--~----------------------v~DAv~~~ln~-------~aRi~~CG~IS~YN  255 (340)
T COG2130         219 GIDVYFENVGG--E----------------------VLDAVLPLLNL-------FARIPVCGAISQYN  255 (340)
T ss_pred             CeEEEEEcCCc--h----------------------HHHHHHHhhcc-------ccceeeeeehhhcC
Confidence            69999999983  1                      13344566654       57888877766654

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.66  E-value=0.15  Score=45.07  Aligned_cols=83  Identities=22%  Similarity=0.164  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.++||.|+ |-||...-..+-..|+ +|++++-...+++...+ +     +.++..-...-++.+++.+.++......
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~-----Ga~~~~~~~~~~~~~~~~~~v~~~~g~~  241 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F-----GATVTDPSSHKSSPQELAELVEKALGKK  241 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h-----CCeEEeeccccccHHHHHHHHHhhcccc
Confidence            4789999998 8999999988889998 79999998888776555 4     5444333333334555555555544322


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                       .+|+.|.|.|.
T Consensus       242 -~~d~~~dCsG~  252 (354)
T KOG0024|consen  242 -QPDVTFDCSGA  252 (354)
T ss_pred             -CCCeEEEccCc
Confidence             48999999994

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.63  E-value=0.025  Score=45.07  Aligned_cols=40  Identities=28%  Similarity=0.395  Sum_probs=31.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..+++||+++|.|.|.-+|+-++..|.++|+.|.++....
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            4579999999999999999999999999999999876554

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.63  E-value=0.051  Score=50.08  Aligned_cols=83  Identities=19%  Similarity=0.174  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++-++|+.|| ||||-++.+-|+..|+ +|.+++.+.-.+..+-++         ..+-+-|+....+.  ...++..+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQ---------FLFrkkhVgqsKA~--vA~~~v~~   77 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQ---------FLFRKKHVGQSKAT--VAAKAVKQ   77 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhh---------heeehhhcCchHHH--HHHHHHHH
Confidence            46788999998 8999999999999999 699999876655554433         33333466554322  22233333


Q ss_pred             C-CCccEEEEcCCCCCC
Q 023438          108 H-HQLNILINNAGIMGT  123 (282)
Q Consensus       108 ~-g~id~vi~~ag~~~~  123 (282)
                      | ++++++-++|.+..+
T Consensus        78 Fnpn~~l~~yhanI~e~   94 (603)
T KOG2013|consen   78 FNPNIKLVPYHANIKEP   94 (603)
T ss_pred             hCCCCceEeccccccCc
Confidence            3 578888888876544

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.61  E-value=0.24  Score=43.83  Aligned_cols=112  Identities=13%  Similarity=0.177  Sum_probs=71.0

Q ss_pred             EecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           36 VTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        36 ItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+|+ |.+|.++|..|+..|.  ++++++.+.+.+.....++.....  ...+... .  .+.+       .    +.+.
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~~-------~----~~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDYS-------D----CKDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCHH-------H----HCCC
Confidence            4565 9999999999998885  799999998887777777765421  1112222 1  2211       1    2377


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      |++|.+||....+. .+-.   +.++.|.    .+++.+.+.+.+.    ++.+.++++|.-.
T Consensus        66 DivVitag~~rk~g-~~R~---dll~~N~----~i~~~~~~~i~~~----~p~~~vivvsNP~  116 (299)
T TIGR01771        66 DLVVITAGAPQKPG-ETRL---ELVGRNV----RIMKSIVPEVVKS----GFDGIFLVATNPV  116 (299)
T ss_pred             CEEEECCCCCCCCC-CCHH---HHHHHHH----HHHHHHHHHHHHh----CCCeEEEEeCCHH
Confidence            99999999754432 2222   3344444    4566666666664    2467888888743

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.60  E-value=0.069  Score=49.87  Aligned_cols=42  Identities=26%  Similarity=0.273  Sum_probs=36.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~   68 (282)
                      +..+.||+++|.|.+ .||+.+|+.|...|++|++++++....
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            467899999999985 699999999999999999998876543

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.59  E-value=0.082  Score=47.13  Aligned_cols=79  Identities=15%  Similarity=0.110  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.+++|.|+++++|.++++.+.+.|++|+.+.++.+..+.. +++     +.+  . ..+..+.+..+.+.+..  ..+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~--~-v~~~~~~~~~~~~~~~~--~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GAD--A-FVDFKKSDDVEAVKELT--GGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCc--E-EEcCCCccHHHHHHHHh--cCC
Confidence            478999999999999999999999999999999887654433 222     211  1 12333333333332222  123


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6899998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.58  E-value=0.031  Score=49.16  Aligned_cols=41  Identities=22%  Similarity=0.173  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ..+++||.+.|.|.|+-+|+.+|..|.++|+.|.++.+...
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            45789999999999999999999999999999999876543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.56  E-value=0.11  Score=47.35  Aligned_cols=74  Identities=16%  Similarity=0.260  Sum_probs=48.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+ |++|..+++.+...|++|++++++.+...+..+++     +... .  .|..+.+.+.+       ..+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-----Ga~~-~--i~~~~~~~v~~-------~~~  241 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-----GADS-F--LVTTDSQKMKE-------AVG  241 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-----CCcE-E--EcCcCHHHHHH-------hhC
Confidence            5789999886 89999999999999999998887755433333322     3221 1  23333222221       113


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       242 ~~D~vid~~G  251 (375)
T PLN02178        242 TMDFIIDTVS  251 (375)
T ss_pred             CCcEEEECCC
Confidence            5899999987

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.54  E-value=0.087  Score=47.56  Aligned_cols=78  Identities=18%  Similarity=0.211  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |++|.++++.+...|++ |+.++++.++.+.. +++     +.. .  ..|..+.+..+.+. +... .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~-----Ga~-~--~i~~~~~~~~~~i~-~~~~-~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF-----GAT-H--TVNSSGTDPVEAIR-ALTG-G  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-e--EEcCCCcCHHHHHH-HHhC-C
Confidence            4789999985 99999999988899995 88888887664443 222     321 1  12444333223222 2211 1


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      ..+|+++.++|
T Consensus       244 ~g~d~vid~~g  254 (358)
T TIGR03451       244 FGADVVIDAVG  254 (358)
T ss_pred             CCCCEEEECCC
Confidence            25899999988

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.54  E-value=0.13  Score=47.00  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      ++.+++|+|+++++|.+++..+...|+++++++++.++.+..
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988888877664443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.53  E-value=0.58  Score=37.76  Aligned_cols=76  Identities=17%  Similarity=0.175  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++++++=.|++.|.   ++..+++.|.+|+.++.+....+...+.+...  +.++.++.+|+.+..            .
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~   80 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------R   80 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------C
Confidence            456788888877664   45556666778999999988887777766543  345777888875421            2


Q ss_pred             CCccEEEEcCCCC
Q 023438          109 HQLNILINNAGIM  121 (282)
Q Consensus       109 g~id~vi~~ag~~  121 (282)
                      +.+|+++.|....
T Consensus        81 ~~fD~Vi~n~p~~   93 (179)
T TIGR00537        81 GKFDVILFNPPYL   93 (179)
T ss_pred             CcccEEEECCCCC
Confidence            4789999987643

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PLN03139 formate dehydrogenase; Provisional

Probab=95.51  E-value=0.16  Score=46.43  Aligned_cols=39  Identities=23%  Similarity=0.116  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..+++||++.|.|. |.||+++|+.|...|++|+..+|+.
T Consensus       194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35789999999995 8899999999999999999988874

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.51  E-value=0.17  Score=45.26  Aligned_cols=90  Identities=20%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH-------HHHhCCCCceeEEEccCCCHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~-------l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      ..++++++.|.|. |-+|.++|+.|...|++|++..|+.....+..++       ..+.....++..+.  +-+ +....
T Consensus        13 ~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLa--VPd-~~~~~   88 (330)
T PRK05479         13 SLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMIL--LPD-EVQAE   88 (330)
T ss_pred             hhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEc--CCH-HHHHH
Confidence            3478999999987 6899999999999999998887764433222221       11111122333332  222 23355


Q ss_pred             HH-HHHHhcCCCccEEEEcCCC
Q 023438          100 FA-SEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       100 ~~-~~i~~~~g~id~vi~~ag~  120 (282)
                      ++ +++.....+=.+|++++|+
T Consensus        89 V~~~~I~~~Lk~g~iL~~a~G~  110 (330)
T PRK05479         89 VYEEEIEPNLKEGAALAFAHGF  110 (330)
T ss_pred             HHHHHHHhcCCCCCEEEECCCC
Confidence            55 5555443222467888885

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.51  E-value=0.2  Score=44.59  Aligned_cols=90  Identities=24%  Similarity=0.228  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHH------HHHHhCCCCceeEEEccCCCHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE------TIVKEIPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~------~l~~~~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      -.++||++.|+|- |.+|.++|+.|...|++|++..|.....+...+      .+.+.....++..+.+  .++++ ..+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llL--Pd~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLL--PDEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeC--CChHH-HHH
Confidence            4579999999998 889999999999999999988776433222111      1222222334444443  33333 455


Q ss_pred             HH-HHHhcCCCccEEEEcCCC
Q 023438          101 AS-EYNIQHHQLNILINNAGI  120 (282)
Q Consensus       101 ~~-~i~~~~g~id~vi~~ag~  120 (282)
                      +. .+.....+=.+|+.+.|+
T Consensus        88 ~~~eil~~MK~GaiL~f~hgf  108 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGF  108 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCc
Confidence            43 454444344577777775

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.50  E-value=0.12  Score=46.14  Aligned_cols=75  Identities=17%  Similarity=0.362  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+++++|.++++.+...|++|+.+.++ ++ .+..+++     +..   ...|..+.+..+.+.    . .+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~-----g~~---~~~~~~~~~~~~~l~----~-~~  226 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL-----GAD---DVIDYNNEDFEEELT----E-RG  226 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh-----CCc---eEEECCChhHHHHHH----h-cC
Confidence            38999999999999999999999999998887765 22 2222222     221   112333333333222    1 24


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            6999999887

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=95.50  E-value=0.1  Score=43.60  Aligned_cols=35  Identities=31%  Similarity=0.384  Sum_probs=30.1

Q ss_pred             CCEEEEecCCChhHH-----HHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGT-----ETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~-----aia~~l~~~G~~Vii~~r~~   65 (282)
                      ++.++||.|-||+|+     ++...|++.|.+|++++-+-
T Consensus         2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~Di   41 (272)
T COG2894           2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDI   41 (272)
T ss_pred             ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence            478999999999996     67778999999999998553

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.47  E-value=0.086  Score=47.49  Aligned_cols=73  Identities=26%  Similarity=0.341  Sum_probs=47.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC---hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~---~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|++++|+|+ |++|...++.+...|++|++++|+   .++.+ ..++    + +..  .  .|..+ +++..    .. 
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~----~-Ga~--~--v~~~~-~~~~~----~~-  234 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEE----L-GAT--Y--VNSSK-TPVAE----VK-  234 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHH----c-CCE--E--ecCCc-cchhh----hh-
Confidence            5789999986 999999998888899999999984   33322 2222    2 322  2  24333 22222    11 


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ..+.+|++|.++|
T Consensus       235 ~~~~~d~vid~~g  247 (355)
T cd08230         235 LVGEFDLIIEATG  247 (355)
T ss_pred             hcCCCCEEEECcC
Confidence            1247899999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.46  E-value=0.16  Score=45.36  Aligned_cols=90  Identities=20%  Similarity=0.249  Sum_probs=57.7

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh--hHHHH------HHHHHHhCCCCceeEEEccCCCHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA--AGKDV------KETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~--~~~~~------~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      ...+++||++-|.|- |.||+++|+.+..-|++|+..+|+..  ...+.      .+++.+   ...+..+.|-++... 
T Consensus       140 ~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~---~sDii~l~~Plt~~T-  214 (324)
T COG1052         140 LGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLA---ESDIISLHCPLTPET-  214 (324)
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHH---hCCEEEEeCCCChHH-
Confidence            356799999999997 89999999999988899999998863  10110      223333   346777777777542 


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCC
Q 023438           97 VRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                       ..+++.-.-..-+...++-|.|-
T Consensus       215 -~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         215 -RHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             -hhhcCHHHHHhCCCCeEEEECCC
Confidence             44433322111244555555553

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.46  E-value=0.026  Score=44.99  Aligned_cols=37  Identities=16%  Similarity=0.122  Sum_probs=33.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR   63 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r   63 (282)
                      -++++|+.++|.|| |.+|...++.|.+.|++|.+++.
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            46899999999998 89999999999999999998853

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.43  E-value=0.13  Score=46.40  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=33.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGK   69 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~   69 (282)
                      .|.++||+| ++++|.++++.+...|+ +|++++++.++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            678999997 59999999999999999 8998888766543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.41  E-value=0.046  Score=47.60  Aligned_cols=43  Identities=23%  Similarity=0.344  Sum_probs=37.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~   74 (282)
                      +++++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+.+.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468999997 9999999999999998 699999998877665544

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.39  E-value=0.057  Score=48.10  Aligned_cols=63  Identities=25%  Similarity=0.289  Sum_probs=44.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH-H---HHHHHHHHhCCCCceeEEEccCCC
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-K---DVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~-~---~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      .+++||++.|.|- |.||+++|+.+...|++|+..+|..... .   ...+++.+   ..++..+.+-++.
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~---~sDiv~l~~Plt~  209 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLK---QADIVTLHCPLTE  209 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHH---hCCEEEEcCCCCh
Confidence            4689999999998 9999999999999999999887753211 0   01222222   3456666666664

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.38  E-value=0.039  Score=45.73  Aligned_cols=73  Identities=19%  Similarity=0.158  Sum_probs=44.9

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhC---------CCCceeEEEccCCCHHHHHHHHHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEI---------PSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~---------~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ...+||+|-||.+++++|++.|++|++.+|+.++ .+.+.+.+....         ....+.++..-.   +.+..+..+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            3456777999999999999999999999665544 444444432221         112344444333   445556666


Q ss_pred             HHhcCC
Q 023438          104 YNIQHH  109 (282)
Q Consensus       104 i~~~~g  109 (282)
                      +....+
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            655443

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.32  E-value=0.053  Score=52.23  Aligned_cols=73  Identities=11%  Similarity=0.075  Sum_probs=53.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ..++|.|+ |.+|++++++|.++|.+|++++.|++..++..    +    .....+.+|.+|++.++++-      ..+.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~----~----~g~~~i~GD~~~~~~L~~a~------i~~a  482 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR----E----RGIRAVLGNAANEEIMQLAH------LDCA  482 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H----CCCeEEEcCCCCHHHHHhcC------cccc
Confidence            34566665 89999999999999999999999987654443    2    14778999999987666531      1256


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      |.++.+.+
T Consensus       483 ~~viv~~~  490 (558)
T PRK10669        483 RWLLLTIP  490 (558)
T ss_pred             CEEEEEcC
Confidence            76666544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	282
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-24
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		4e-08
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		9e-08
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-07
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-07
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		6e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-06
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-06
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-06
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		5e-06
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		5e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		6e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		6e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-05
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-05
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-05
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-05
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-05
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-05
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		4e-05
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		4e-05
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		4e-05
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-05
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		8e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		9e-05
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-04
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-04
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-04
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-04
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-04
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-04
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-04
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-04
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		4e-04
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-04
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-04
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SG+G  TAR LA RG  V+M VRD   G+    T+     + +V+  ELDL 
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQ 72
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 152
            L+SVR FA   +      ++LINNAGIM  P+ L+ D  E Q                 
Sbjct: 73  DLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP 128
Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS-GYNGFRAYSQSKLANILHA 211
            +           R++ VSS  H   +   I  + +N  S  Y+ + AYSQSKLAN+L  
Sbjct: 129 RLTD---------RVVTVSSMAH---WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFT 176
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
           +EL RRL   G  + A + HPG   TN+
Sbjct: 177 SELQRRLTAAGSPLRALAAHPGYSHTNL 204

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM---GT-----PFMLSKDNIELQFAXXX 140
            D++  +   +  +    +  +++IL+NNAG     GT     P  L +   +L F    
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144
Query: 141 XXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
                       T K        +G I+NVSS               +  P  ++G+  Y
Sbjct: 145 EM----------TQKTKEHLIKTKGEIVNVSS--------------IVAGPQAHSGYPYY 180
Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIA 260
           + +K A   +    A  L + GV +  NSV PGA+AT  +    L  + +  L++  G  
Sbjct: 181 ACAKAALDQYTRCTAIDLIQHGVRV--NSVSPGAVATGFMGAMGLPETASDKLYSFIGSR 238
Query: 261 GKCL 264
            +C+
Sbjct: 239 KECI 242

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG +G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 188
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG +G        + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 184
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 185 KALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 188
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGWVETPM 214

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 188
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGLVHAAPYSASKHGVVGFT 188
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 188
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 64
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 123
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 168
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 169 KALGLELARTG--ITVNAVCPGFVETPM 194

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             +K       G GRI+N++S G +                G      YS SK   +   
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK---------------QGVVHAAPYSASKHGVVGFT 184
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             L   L   G  IT N+V PG + T +
Sbjct: 185 KALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF 125
           DLS   ++  FA+     H + ++L+NNAG+   G P 
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL 123

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A++TG  +GIG   A   A+ G  +   + D+    +  E  ++ +   +V  ++ D+S 
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADI--AIADLVPAPEA-EAAIRNL-GRRVLTVKCDVSQ 65
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMG-TPF-MLSKDNIELQFAXXXXXXXXXXXXXX 151
              V  F  +      + +IL+NNAGI    PF  L+ +  +  F               
Sbjct: 66  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
             MK+      G GRIIN++S  + L         KI        +  Y  +K ANI   
Sbjct: 126 PGMKRN-----GWGRIINLTSTTYWL---------KI------EAYTHYISTKAANIGFT 165
Query: 212 NELARRLKEDGVDITANSVHPGAIATNIIRHNSL---FRSMNTILHALP 257
             LA  L +DG  IT N++ P  + T     ++L   F  +  +L A+P
Sbjct: 166 RALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP 212

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG E A  LA +G  VV G     A  +  E   KE    K   + L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVV-GTATSQASAEKFENSXKE-KGFKARGLVLNISD 65
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDT 153
           + S++NF +E   ++  ++IL+NNAGI            E Q +              + 
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQ-SVINTNLSSIFRXSKEC 124
Query: 154 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 213
           ++   +K    GRII++ S               +   +G  G   Y  +K   I  +  
Sbjct: 125 VRGXXKKRW--GRIISIGS---------------VVGSAGNPGQTNYCAAKAGVIGFSKS 167
Query: 214 LARRLKEDGVDITANSVHPGAIATN 238
           LA  +     +IT N V PG IAT+
Sbjct: 168 LAYEVASR--NITVNVVAPGFIATD 190

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 33  TAIVTGATSGIGTETA--RVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           T ++TGA++GIG  TA   + A  G + +++  R +   +++K+TI +E P+AKV   +L
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG 119
           D++    ++ F      +   ++IL+NNAG
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNAG 124

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS+
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FAXXXXXXXXXXXXXX 151
              + +  S    QH  ++I INNAG+     +LS      +  F               
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 154
Query: 152 DTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
            +MK+   ++  +G IIN++S  GHR+             P     F  YS +K A    
Sbjct: 155 QSMKE---RNVDDGHIININSMSGHRVL------------PLSVTHF--YSATKYAVTAL 197
Query: 211 ANELARRLKEDGVDITANSVHPGAIATNI 239
              L + L+E    I A  + PG + T  
Sbjct: 198 TEGLRQELREAQTHIRATCISPGVVETQF 226

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
           G    A+VTGA  GIG E A++LA    HV+     I+  +   +++V EI S   ++  
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVIC----ISRTQKSCDSVVDEIKSFGYESSG 97
Query: 89  L--DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXX 146
              D+S    +    ++   +H  ++IL+NNAGI      L   N E +           
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                 + +    +    GRIIN+SS               I   +G  G   YS SK  
Sbjct: 158 YITQPISKRMINNRY---GRIINISS---------------IVGLTGNVGQANYSSSKAG 199
Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
            I     LA+ L     +IT N++ PG I++++
Sbjct: 200 VIGFTKSLAKELASR--NITVNAIAPGFISSDM 230

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 92
           +VTG + GIG    R+ A +G  V  GV + AA ++  + +V  I  +  +A+ +  D+ 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRV--GV-NYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 152
           + A +    S  + Q  +L+ L+NNAGI+  P  + + ++E                  +
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAE 146
Query: 153 TMKKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
            +++ +R  SG  G I+NVSS    L                   +  Y+ SK A     
Sbjct: 147 AVRRXSRLYSGQGGAIVNVSSXAAILGSA--------------TQYVDYAASKAAIDTFT 192
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             LAR +  +G+ +  N+V PG I T++
Sbjct: 193 IGLAREVAAEGIRV--NAVRPGIIETDL 218

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELD 90
           +A+VTGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 68
Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXX 150
           ++    V+    E   Q   L++L+NNAGI     ++     E                 
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 151 XDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
             T +   ++SG    IIN+SS               + +P   N    Y  +K   I  
Sbjct: 129 KATPQMLRQRSGA---IINLSS-----------VVGAVGNPGQAN----YVATKAGVIGL 170
Query: 211 ANELARRLKEDGVDITANSVHPGAIATNI 239
               AR L   G  IT N+V PG I +++
Sbjct: 171 TKSAARELASRG--ITVNAVAPGFIVSDM 197

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FAXXXXXXX 144
           D+S   SV+   +E       ++IL+NNA I+  PF ++ D+++L               
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PF-VAWDDVDLDHWRKIIDVNLTGTF 116
Query: 145 XXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
                  D M    R +G  GR+I+++S                   +G     AY  +K
Sbjct: 117 IVTRAGTDQM----RAAGKAGRVISIASNTFF---------------AGTPNMAAYVAAK 157
Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR---HNSLFRSMNTILHALPG 258
              I     LA  L +   +ITAN+V PG I ++ ++   HN  F  +  +L A+ G
Sbjct: 158 GGVIGFTRALATELGK--YNITANAVTPGLIESDGVKASPHNEAFGFVE-MLQAMKG 211

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 91
           AIVTGA+ GIG   A  LA  G  VV+     AA     E +  +I +A   A+  + D+
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAA---AAEEVAGKIEAAGGKALTAQADV 86
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
           S  A+VR   +        +++L+NNAGI   P     +  +  F               
Sbjct: 87  SDPAAVRRLFATAEEAFGGVDVLVNNAGIX--PLTTIAETGDAVF---DRVIAVNLKGTF 141
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
           +T+++ A++    GRIIN S+    L +           PS    +  Y+ +K       
Sbjct: 142 NTLREAAQRLRVGGRIINXSTSQVGLLH-----------PS----YGIYAAAKAGVEAXT 186
Query: 212 NELARRLKEDGVDITANSVHPGAIATNII 240
           + L++ L+  G DIT N+V PG  AT++ 
Sbjct: 187 HVLSKELR--GRDITVNAVAPGPTATDLF 213

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 26/214 (12%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 MKK      G GRIIN++S  H L      +   +    G  GF   +      
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS-AHGLVASAN-KSAYVAAKHGVVGFTKVTA----- 170
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                     L+  G  ITAN++ PG + T ++ 
Sbjct: 171 ----------LETAGQGITANAICPGWVRTPLVE 194

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           D++    +R+   +      +L+IL+NNAG+       ++ N E                
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 119
Query: 150 XXDTMKKTARKSGGEGR-IINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
             D M K   ++GGEG  IIN+SS    +             P         S+  +   
Sbjct: 120 GLDYMSK---QNGGEGGIIINMSSLAGLM-------------PVAQQPVYCASKHGIVGF 163
Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIR 241
             +  LA  L   GV +  N++ PG + T I+ 
Sbjct: 164 TRSAALAANLMNSGVRL--NAICPGFVNTAILE 194

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +LD++
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVT 72
Query: 93  S-LASVRNFASEYNIQHHQLNILINNAGIMG 122
             +A++ + A        +L+IL+NNAG+ G
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL-QFAXXXXXXXXXXX 148
           D+S   SV+   +E       ++IL+NNA I+  PF+ + D+++L  +            
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PFV-AWDDVDLDHWRKIIDVNLTGTF 116
Query: 149 XXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                     R +G  GR+I+++S                   +G     AY  +K   I
Sbjct: 117 IVTRAGTDQXRAAGKAGRVISIASNTFF---------------AGTPNXAAYVAAKGGVI 161
Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIR---HNSLF 246
                LA  L +   +ITAN+V PG I ++ ++   HN  F
Sbjct: 162 GFTRALATELGK--YNITANAVTPGLIESDGVKASPHNEAF 200

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDL 91
           TA VTG +SGIG   AR LA RG+ V    RD    K+V   +         VD    D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDA---KNVSAAVDGLRAAGHDVDGSSCDV 82
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
           +S   V    +    +   + IL+N+AG  G       D+  L                 
Sbjct: 83  TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDD-ALWADVLDTNLTGVFRVTR 141
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
           + ++    +  G GRI+N++S G +    +G+ +              Y+ SK   +   
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGK----QGVMYAA-----------PYTASKHGVVGFT 186
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             +   L + G  IT N+V PG + T +
Sbjct: 187 KSVGFELAKTG--ITVNAVCPGYVETPM 212

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 26/214 (12%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 MKK      G GRIIN++S  H L      +   +    G  GF   +      
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS-AHGLVASAN-KSAYVAAKHGVVGFTKVTA----- 170
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                     L+  G  ITAN++ PG + + ++ 
Sbjct: 171 ----------LETAGQGITANAICPGWVRSPLVE 194

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELD 90
           +A+VTGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62
Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXX 150
           ++    V+    E   Q   L++L+NNAGI     +      E                 
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 151 XDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
             T +   ++SG    IIN+SS               + +P   N    Y  +K   I  
Sbjct: 123 KATPQXLRQRSGA---IINLSS-----------VVGAVGNPGQAN----YVATKAGVIGL 164
Query: 211 ANELARRLKEDGVDITANSVHPGAIATN 238
               AR L   G  IT N+V PG I ++
Sbjct: 165 TKSAARELASRG--ITVNAVAPGFIVSD 190

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 26/214 (12%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 MKK      G GRIIN++S  H L      +   +    G  GF   +      
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS-AHGLVASAN-KSAYVAAKHGVVGFTKVTA----- 170
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                     L+  G  ITAN++ PG +   ++ 
Sbjct: 171 ----------LETAGQGITANAICPGWVRAPLVE 194

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +G TA VTG + GIG   A+ LAL G  V +   + A   +  + +V EI  A  +  A+
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA---ERAQAVVSEIEQAGGRAVAI 86
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQFAXXXXXXXXX 146
             D     ++     E       L+IL+N+AGI    P        E   A         
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLE------ETTVADFDEVXAVN 140
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                  ++  +R  G  GRII + S    L    GI                YS SK A
Sbjct: 141 FRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISL--------------YSASKAA 186
Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATN 238
                  LAR L   G  IT N VHPG+  T+
Sbjct: 187 LAGLTKGLARDLGPRG--ITVNIVHPGSTDTD 216

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 48/247 (19%)
Query: 34  AIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-L 91
           A+VTGA  GIG   AR L  +    VV+  RD+A G+   + +  E  S +   +++D L
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDL 64
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKDNIELQFAXXXXXXXXX 146
            S+ ++R+F  +   ++  LN+L+NNA +        PF +     E+            
Sbjct: 65  QSIRALRDFLRK---EYGGLNVLVNNAAVAFKSDDPMPFDIKA---EMTLKTNFFATRNM 118
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSS------------------------EGHRLAYHEG 182
                  MK         GR++N+SS                        EG  +   + 
Sbjct: 119 CNELLPIMKP-------HGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKK 171
Query: 183 IRFDKINDPSGYNGF--RAYSQSKLANILHANELARRLKE--DGVDITANSVHPGAIATN 238
              D  N+     G+    Y  SKL   + +  LARRL E      I  N+  PG + T+
Sbjct: 172 FVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTD 231
Query: 239 IIRHNSL 245
           +   +S+
Sbjct: 232 MDGKDSI 238

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 197 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 251
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+                 
Sbjct: 252 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA---- 306
Query: 149 XXXDTMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   
Sbjct: 307 ----PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGM 351
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 254
           I     LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 352 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 401

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 234 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 288
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+                 
Sbjct: 289 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA---- 343
Query: 149 XXXDTMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   
Sbjct: 344 ----PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGM 388
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 254
           I     LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 389 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 438

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 213 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 267
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+                 
Sbjct: 268 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA---- 322
Query: 149 XXXDTMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   
Sbjct: 323 ----PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGM 367
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 254
           I     LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 368 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 417

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 205 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 259
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+                 
Sbjct: 260 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA---- 314
Query: 149 XXXDTMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   
Sbjct: 315 ----PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGM 359
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 254
           I     LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 360 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 409

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 221 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 275
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+                 
Sbjct: 276 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA---- 330
Query: 149 XXXDTMKKTARKSGGEGRIINVS-SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                ++ T      EG + N S  EG R+     I    I   +G  G   Y+ +K   
Sbjct: 331 ----PLRLT------EGLVGNGSIGEGGRV-----IGLSSIAGIAGNRGQTNYATTKAGM 375
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNI-----IRHNSLFRSMNTILH 254
           I     LA  L   G  IT N+V PG I T +     +    + R +N++L 
Sbjct: 376 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQ 425

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 41/219 (18%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD---AM 87
           G  A+VTGA+ GIG   A +LA RG  V+        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQFAXXXXX 142
            L++++  S+         +   ++IL+NNAGI       ++DN+     E +++     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMET 116
Query: 143 XXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
                      + +   K   +GRIINV S               +    G  G   Y+ 
Sbjct: 117 NLTSIFRLSKAVLRGMMKK-RQGRIINVGS---------------VVGTMGNAGQANYAA 160
Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K   I     +AR +   GV  T N+V PGAI T++ +
Sbjct: 161 AKAGVIGFTKSMAREVASRGV--TVNTVAPGAIETDMTK 197

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 86/220 (39%), Gaps = 43/220 (19%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAM 87
           G  A+VTGA+ GIG   A  LA RG  V+        G    E   + I     A    +
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI--------GTATSENGAQAISDYLGANGKGL 56
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS------KDNIELQFAXXXX 141
            L+++  AS+ +   +   +  +++IL+NNAGI     ++        D IE   +    
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 142 XXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
                       M+   +K    GRII + S               +    G  G   Y+
Sbjct: 117 LSKA-------VMRAMMKKR--HGRIITIGS---------------VVGTMGNGGQANYA 152
Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +K   I  +  LAR +   G  IT N V PG I T++ R
Sbjct: 153 AAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTR 190

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D S   A+VTG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A 
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
             D+     VR FA          +IL+NNAG
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAG 96

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 95/244 (38%), Gaps = 40/244 (16%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS 92
           IVTG+  GIG   A  LA  G  VV  V DI A  +  E + K+I +    A+   +D+S
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVV--VADINA--EAAEAVAKQIVADGGTAISVAVDVS 68
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFAXXXXXXXXXXXX 149
              S +  A     +   ++ L+NNA I G     F+L+ D  E                
Sbjct: 69  DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDP-EYYKKFMSVNLDGALWC 127
Query: 150 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
                KK  ++ GG   I+N SS    L Y       K+    G NG             
Sbjct: 128 TRAVYKKMTKRGGGA--IVNQSSTAAWL-YSNYYGLAKV----GINGL------------ 168
Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP--------GIAG 261
              +L+R L   G +I  N++ PG I T   R  +    ++ I+  LP         + G
Sbjct: 169 -TQQLSRELG--GRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVG 225
Query: 262 KCLL 265
            CL 
Sbjct: 226 MCLF 229

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 30/221 (13%)
Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--VKEIPSAKVD 85
           D  G + +VTG T GIG   A V A  G +V +  R  A   D+   +  + ++ S KV 
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA---DIDACVADLDQLGSGKVI 63
Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPF-MLSKDNIELQFAXXXXXX 143
            ++ D+S  A     A     +   ++++  NAG+    P   ++ + +   FA      
Sbjct: 64  GVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGT 123
Query: 144 XXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP-SGYNGFRAYSQ 202
                   D +  +     G GR++  SS               I  P +GY G+  Y  
Sbjct: 124 FYAVQACLDALIAS-----GSGRVVLTSS---------------ITGPITGYPGWSHYGA 163
Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
           +K A +      A  L      IT N++ PG I T  +  N
Sbjct: 164 TKAAQLGFMRTAAIELAPH--KITVNAIMPGNIMTEGLLEN 202

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG + GIG   A+ L   G  V +  RD  A  D   T  +        A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACAD---TATRLSAYGDCQAIPA 84
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG 119
           DLSS A  R  A        +L+IL+NNAG
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAG 114

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 28/210 (13%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAM 87
           +G TA+VTGA SGIG   A   A  G HV+   R       VKE +  EI       +A+
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT----DGVKE-VADEIADGGGSAEAV 84
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXX 147
             DL+ L    N A E      ++++L+NNAGI+        + + L             
Sbjct: 85  VADLADLEGAANVAEELAAT-RRVDVLVNNAGIIARA---PAEEVSLGRWREVLTVNLDA 140
Query: 148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                    TA  + G GRI+ ++S    L++  G                AY+ SK A 
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIAS---MLSFQGG------------RNVAAYAASKHAV 185
Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +     LA      GV +  N++ PG + T
Sbjct: 186 VGLTRALASEWAGRGVGV--NALAPGYVVT 213

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS 92
           ++TGA+ GIG   AR L + G  +++G R  A      E I  EI  A   A+   LD++
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDVT 63
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSK-DNIELQFAXXXXXXXXXXXXX 150
              SV  FA        ++++L+NNAG+M  +P    K D  E                 
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 151 XDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
              M+  A++S   G+IIN+ S G                        A S    A +  
Sbjct: 124 LPIME--AQRS---GQIINIGSIG------------------------ALSVVPTAAVYC 154
Query: 211 ANELARR-----LKEDGVDITANSVHPGAIATNI---IRHNSLFRSMNT 251
           A + A R     L+++  +I    V+PG + + +   I H     +M+T
Sbjct: 155 ATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDT 203

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 43/220 (19%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAM 87
           G  A+VTGA+ GIG   A  LA RG  V+        G    E   + I     A    +
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI--------GTATSENGAQAISDYLGANGKGL 56
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXX------XX 141
            L+++  AS+ +   +   +  +++IL+NNAGI       ++DN+ ++            
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGI-------TRDNLLMRMKDEEWNDIIET 109
Query: 142 XXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
                       M+   +K    GRII + S               +    G  G   ++
Sbjct: 110 NLSSVFRLSKAVMRAMMKKR--HGRIITIGS---------------VVGTMGNGGQANFA 152
Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +K   I  +  LAR +   G  IT N V PG I T++ R
Sbjct: 153 AAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTR 190

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 34  AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTGA  GIG    R L  +    VV+  RD+A G+   + +  E  S +    +LD+ 
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLDII 64
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKDNIELQFAXXXXXXXXXX 147
            L S+R        ++  L++L+NNA I       TPF +     EL             
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTRNVC 121
Query: 148 XXXXDTMKKTARKSGGEGRIINVSS-EGHR 176
                 +K        +GR++NVSS EG R
Sbjct: 122 TELLPLIKP-------QGRVVNVSSTEGVR 144

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G TA+VTG+T+GIG   A  L   G +V++ G R+    + +KE I  + P A +  +  
Sbjct: 10  GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE-IRAQYPDAILQPVVA 68
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           DL +    ++   +Y     +++ILINN GI   P        E  F             
Sbjct: 69  DLGTEQGCQDVIEKY----PKVDILINNLGIF-EPVEYFDIPDEDWFKLFEVNIXSGVRL 123
Query: 150 XXDTMKKTARKSGGEGRIINVSSEG 174
               +KK   +   EGR+I ++SE 
Sbjct: 124 TRSYLKKXIERK--EGRVIFIASEA 146

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTGA  GIG   A V A  G  VV    D AA +D+K    K        A+ LD
Sbjct: 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK----VGGTALTLD 267
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
           +++  +V    +    +HH  +++IL+NNAGI     + + D  E ++            
Sbjct: 268 VTADDAVDKITAHVT-EHHGGKVDILVNNAGITRDKLLANMD--EKRWDAVIAVNLLAPQ 324
Query: 149 XXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
              + +        G GR+I +SS         GI        +G  G   Y+ +K   I
Sbjct: 325 RLTEGLVGNGTIGEG-GRVIGLSS-------MAGI--------AGNRGQTNYATTKAGMI 368
Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNII------------RHNSLFR 247
             A  LA  L + G  IT N+V PG I T +             R NSLF+
Sbjct: 369 GLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQ 417

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  ++VTG+T GIG   A  LA  G  V++        K V E I  +    K   +E++
Sbjct: 7   GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMN 65
Query: 91  LSSLASV-RNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           L S  S+ + F   YN+    ++IL+NNAGI      L    ++ +              
Sbjct: 66  LLSEESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWE-EVLKVNLTGTFLV 123
Query: 150 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
             ++++K  ++    GRI+N+SS               +   +G  G   YS +K   I 
Sbjct: 124 TQNSLRKMIKQRW--GRIVNISS---------------VVGFTGNVGQVNYSTTKAGLIG 166
Query: 210 HANELARRLKEDGVDITANSVHPGAIATNI 239
               LA+ L     ++  N+V PG I T++
Sbjct: 167 FTKSLAKELAPR--NVLVNAVAPGFIETDM 194

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 61/229 (26%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G  A+VTGA+ GIG   A  LA +G +VV+   + A  +     +V EI     DA+ + 
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 90  -DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXX 148
            D+++   V N   +      Q++IL+NNAG+       +KDN+ ++             
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRM----------KE 103
Query: 149 XXXDTMKKTARKS--------------GGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY 194
              DT+  T  K                  GRI+N++S               +   +G 
Sbjct: 104 EEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIAS---------------VVGVTGN 148
Query: 195 NGFRAYSQSKLANI----LHANELARRLKEDGVDITANSVHPGAIATNI 239
            G   Y  +K   I      A ELA R      +IT N++ PG IAT++
Sbjct: 149 PGQANYVAAKAGVIGLTKTSAKELASR------NITVNAIAPGFIATDM 191

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLS 92
           ++TG + GIG  +A + A +G  V +   + A+     + +V++I  A  +  A++ D++
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAV---NYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE-LQFAXXXXXXXXXXXXXX 151
               V       + Q  +L+ L+NNAG++     +    +E LQ                
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCARE 145
Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHA 211
              + + R  G  G I+NVSS   RL             P  Y     Y+ +K A     
Sbjct: 146 AVKRXSTRYGGSGGSIVNVSSAAARL-----------GSPGQYVD---YAAAKGAIDTFT 191
Query: 212 NELARRLKEDGVDITANSVHPGAIATNI 239
             LA+ +  +G+ +  N+V PG I T+I
Sbjct: 192 LGLAKEVATEGIRV--NAVRPGIIETDI 217

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 62
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI 120
              SV  F+ +   +   +++++ NAG+
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-L 91
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E  S +   +++D L
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKD 130
            S+ ++R+F  +   ++  L++L+NNAGI       TPF +  +
Sbjct: 67  QSIRALRDFLRK---EYGGLDVLVNNAGIAFKVADPTPFHIQAE 107

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 84
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI 120
              SV  F+ +   +   +++++ NAG+
Sbjct: 85  KAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-L 91
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E  S +   +++D L
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKD 130
            S+ ++R+F  +   ++  L++L+NNAGI       TPF +  +
Sbjct: 67  QSIRALRDFLRK---EYGGLDVLVNNAGIAFKVADPTPFHIQAE 107

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAM-- 87
           G TA+VTG+TSGIG   A+VLA  G ++V+ G  D A         + EI    V A+  
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-------LAEIARHGVKAVHH 56
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGI 120
             DLS +A +    +    +   ++IL+NNAGI
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGI 89

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ID +G T+++TGA+SGIG+  AR+L   G  V++      +G +  E  +K + +A  D 
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVII------SGSN--EEKLKSLGNALKDN 61
Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXX 146
             +++ +LA+ +   S    +   L+IL+ NAGI      +   + +             
Sbjct: 62  YTIEVCNLAN-KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFD-KVIDINLKAN 119
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                + +KK  +K    GRIIN+SS               I   +G  G   Y  SK  
Sbjct: 120 FILNREAIKKMIQKR--YGRIINISS---------------IVGIAGNPGQANYCASKAG 162
Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
            I     L+  +   G  IT N+V PG I +++
Sbjct: 163 LIGMTKSLSYEVATRG--ITVNAVAPGFIKSDM 193

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD---AM 87
           G  A+VTGA+ GIG   A +LA RG  V+        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQFAXXXXX 142
            L++++  S+         +   ++IL+NNAGI       ++DN+     E +++     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMET 116
Query: 143 XXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
                      + +   K   +GRIINV S               +    G  G   Y+ 
Sbjct: 117 NLTSIFRLSKAVLRGMMKK-RQGRIINVGS---------------VVGTMGNAGQANYAA 160
Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K   I     +AR +   GV  T N+V PG I T++ +
Sbjct: 161 AKAGVIGFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           +VTGA+SG G   A      G  V+   R   A  D    +V   P  + +A+ LD++  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD----LVAAYPD-RAEAISLDVTDG 63
Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXDTM 154
             +   A++   ++ ++++L+NNAG   T     ++  E +                  +
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGR--TQVGAFEETTERELRDLFELHVFGPARLTRAL 121
Query: 155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 214
               R+  G G ++N+SS G +L++                GF AYS +K A    +  L
Sbjct: 122 LPQXRER-GSGSVVNISSFGGQLSFA---------------GFSAYSATKAALEQLSEGL 165
Query: 215 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHA 255
           A  +   G+ +    V PGA  TN+    + + S     +A
Sbjct: 166 ADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYFSEENPAYA 204

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TG++SGIG   A   A  G H+V+  R +    +   ++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           D+++   V              +IL+NNAG      ++   + + QF             
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQF--YWELLVMAAVR 122
Query: 150 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               +    R  GG   I N S    +  ++E I                Y+ +K A ++
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPI----------------YNVTKAALMM 166
Query: 210 HANELARRLKEDGVDITANSVHPGAIAT 237
            +  LA  + +D  +I  N ++PG I T
Sbjct: 167 FSKTLATEVIKD--NIRVNCINPGLILT 192

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TG++SGIG   A   A  G H+V+  R +    +   ++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           D+++   V              +IL+NNAG      ++   + + QF             
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQF--YWELHVMAAVR 122
Query: 150 XXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               +    R  GG   I N S    +  ++E I                Y+ +K A ++
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPI----------------YNVTKAALMM 166
Query: 210 HANELARRLKEDGVDITANSVHPGAIAT 237
            +  LA  + +D  +I  N ++PG I T
Sbjct: 167 FSKTLATEVIKD--NIRVNCINPGLILT 192

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM--GVRDIAAGKDVKETIVKEIPSAKVDAME 88
           G  A+VTGA+ GIG   A+ LA  G  V +  G R     K+  E  V EI S    A  
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR-----KEEAEETVYEIQSNGGSAFS 61
Query: 89  L--DLSSLASVRNFASEYN--IQHH----QLNILINNAGIMGTPFMLSKDNIELQFAXXX 140
           +  +L SL  V    S  +  +Q+     + +ILINNAGI    F+  ++  E  F    
Sbjct: 62  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI--EETTEQFFDRXV 119
Query: 141 XXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
                        +++   +     RIIN+SS   R++  +               F AY
Sbjct: 120 SVNAKAPFF---IIQQALSRLRDNSRIINISSAATRISLPD---------------FIAY 161
Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIATN 238
           S +K A       LA++L   G  IT N++ PG + T+
Sbjct: 162 SXTKGAINTXTFTLAKQLGARG--ITVNAILPGFVKTD 197

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A++TGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E D+S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSD 88
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMG 122
               RN   +  ++   L+I++ NAGI G
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGING 117

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--KETIVKEIPSAKVDAME 88
           G  A+VTG+TSGIG   A  LA  G  VV  +      +D+  + + ++     K   + 
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVV--INGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXX 146
            DLS   + R+F ++       L+IL+NNAGI  T  +     D      A         
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHG 121
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                  M+K      G GRIIN++S  H L          +N         AY  +K  
Sbjct: 122 TAAALPIMQKQ-----GWGRIINIAS-AHGL-------VASVNK-------SAYVAAKHG 161
Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +      A  L+  G  IT N++ PG + T ++ 
Sbjct: 162 VVGLTKVTA--LENAGKGITCNAICPGWVRTPLVE 194

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-109
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-75
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-57
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-33
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-33
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-32
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-32
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-32
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-32
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-31
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-31
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-31
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-31
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-30
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-30
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-30
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	6e-30
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-30
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	8e-30
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-29
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-29
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-29
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-29
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	6e-29
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	7e-29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	9e-29
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	9e-29
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-28
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-28
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-28
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-28
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-28
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-28
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-28
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-28
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-28
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	6e-28
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-28
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-28
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	9e-28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-27
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-27
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-27
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-27
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-27
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	7e-27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-26
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-26
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-26
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-26
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-26
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-26
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-26
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-26
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-26
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-26
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-26
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-26
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-26
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-26
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-26
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-26
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-26
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-25
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-25
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-25
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-25
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-25
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-25
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-25
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-25
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-25
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-25
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-25
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-25
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	7e-25
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	7e-25
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	8e-25
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	9e-25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	9e-25
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-24
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-24
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-24
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-24
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-24
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-24
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-24
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-24
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-24
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-24
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-24
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	7e-24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	9e-24
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-24
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-23
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-23
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-23
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-23
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-23
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-23
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-23
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-23
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	8e-23
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-22
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-22
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-22
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-22
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-22
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-22
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-22
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-22
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-21
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-21
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-21
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-21
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-21
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-21
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-21
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-21
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-21
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-21
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-21
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-21
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-21
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	8e-21
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-20
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-20
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-20
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-20
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-20
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-20
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-20
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-20
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-20
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-19
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-19
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-19
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-19
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-19
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-19
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-19
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-19
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	8e-19
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-18
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-18
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-18
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-18
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-18
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-18
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-18
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-18
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-16
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-16
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-16
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-11
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-15
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-14
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-10
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  318 bits (816), Expect = e-109
 Identities = 95/259 (36%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 13  GFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK 72
           G     TA ++      +  T ++TGA SG+G  TAR LA RG  V+M VRD   G+   
Sbjct: 1   GSMTGWTAADLPSF---AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA 57

Query: 73  ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI 132
            T+     + +V+  ELDL  L+SVR FA   +      ++LINNAGIM  P+ L+ D  
Sbjct: 58  RTM-----AGQVEVRELDLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGF 108

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
           E Q  TNHLGHF LTNLLL  +           R++ VSS  H       I  + +N  S
Sbjct: 109 ESQIGTNHLGHFALTNLLLPRLT---------DRVVTVSSMAHWPG---RINLEDLNWRS 156

Query: 193 -GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNT 251
             Y+ + AYSQSKLAN+L  +EL RRL   G  + A + HPG   TN+   +        
Sbjct: 157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-----RK 211

Query: 252 ILHALPGIAGKCLLKNVQQ 270
           +  AL   A + +  +   
Sbjct: 212 LGDALMSAATRVVATDADF 230

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  229 bits (585), Expect = 7e-75
 Identities = 57/246 (23%), Positives = 90/246 (36%), Gaps = 40/246 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
               A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E         +
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQ 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK--DNIELQFATNHLGHFLL 146
           LD+  L S+R        ++  L++L+NNAGI       +      E+   TN  G   +
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-------EGIRFDKIND--------- 190
              LL  +K         GR++NVSS     A         +  R + I +         
Sbjct: 121 CTELLPLIKPQ-------GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNK 173

Query: 191 ----------PSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATN 238
                             AY  +K+   + +   AR+L E   G  I  N+  PG + T+
Sbjct: 174 FVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233

Query: 239 IIRHNS 244
           +    +
Sbjct: 234 MAGPKA 239

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  184 bits (469), Expect = 4e-57
 Identities = 54/275 (19%), Positives = 92/275 (33%), Gaps = 71/275 (25%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +L
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQL 69

Query: 90  DLSS-LASVRNFASEYNIQHHQLNILINNAGIMGTPF----------------------- 125
           D++  +A++ + A        +L+IL+NNAG+ G                          
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 126 ---------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
                      + +  E     N+ G   +T +L+  ++          RI+NVSS    
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL-----SDSPRIVNVSSSTGS 184

Query: 177 LA----------------------------YHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
           L                               +  + + I      +   AY+ SK    
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
            +   LA ++         N V PG + T +    
Sbjct: 245 AYTRVLANKIP----KFQVNCVCPGLVKTEMNYGI 275

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  120 bits (304), Expect = 3e-33
 Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           + +VTGA  GIG    + L       H++   RD+    +     +K I  ++V  + L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 91  LSSLASVRNFASEYNIQH--HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFL 145
           ++   S+  F S+         L++LINNAG++   GT    ++  I  Q   N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 146 LTNLLLDTMKKTARKSGGE------GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
           LT  LL  +K  A K  G+        +I +SS    +  +           S      A
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--------GSAQFPVLA 171

Query: 200 YSQSKLA-NILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
           Y  SK A N+     LA  LK+D   +   +  PG + TN+   N
Sbjct: 172 YRMSKAAINMF-GRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN 213

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  120 bits (304), Expect = 5e-33
 Identities = 49/216 (22%), Positives = 78/216 (36%), Gaps = 25/216 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   ++TGA  GIG  TA   A     +V+   +    ++           AKV    +
Sbjct: 30  TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 87

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D S+   + + A +   +   ++IL+NNAG++  +         IE  F  N L HF  T
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M K        G I+ V+S         G                AY  SK A 
Sbjct: 148 KAFLPAMTKN-----NHGHIVTVASAA-------GH--------VSVPFLLAYCSSKFAA 187

Query: 208 ILHANELARRLKEDGVD-ITANSVHPGAIATNIIRH 242
           +     L   L    +  +    + P  + T  I++
Sbjct: 188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  117 bits (295), Expect = 5e-32
 Identities = 38/215 (17%), Positives = 67/215 (31%), Gaps = 30/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IVTGA SG+G      L  RG  V M  R     +  +  +        V  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVA 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL+    V    +          ++++ AG     P    + + I     +N +   L+ 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  + +        G + NV S   ++               G      Y  SK   
Sbjct: 117 QQTVRLIGERG------GVLANVLSSAAQV---------------GKANESLYCASKWGM 155

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                 L   LK+    +   +++P  I +    +
Sbjct: 156 RGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDN 188

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  118 bits (297), Expect = 7e-32
 Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 29/219 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           +   AI+TG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++ 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI------MGTPFMLSKDNIELQFATNHLG 142
            D+++ A      S    +  +L+IL+NNAG         T    S ++ +     N   
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              LT   +  +  T       G I+N+SS         G+             F  YS 
Sbjct: 125 VIALTKKAVPHLSSTK------GEIVNISS------IASGLH--------ATPDFPYYSI 164

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K A   +    A  L + G  I  NS+ PG +AT    
Sbjct: 165 AKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGS 201

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  117 bits (295), Expect = 7e-32
 Identities = 47/225 (20%), Positives = 84/225 (37%), Gaps = 34/225 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
                ++TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P  KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 87  MELDLSSLASVRNFASE----YNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FA 137
              DL + A V+   S        +  Q  +LINNA  +G       +  +L      +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            N      LT+  L+  + +    G    ++N+SS          ++         Y G+
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC-------ALQ--------PYKGW 166

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             Y   K A     + L + L  +   +   S  PG +  ++ + 
Sbjct: 167 GLYCAGKAA----RDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL 207

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  117 bits (295), Expect = 8e-32
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 26/213 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDL 91
            AI+TGA+ GIG   A  LA  G  VV+  R     + V + I++      +   + LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +          + + ++  ++IL+N A +          DN       N +  + +   +
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV 128

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            + MK   +K+   G I NV+S                     G+     Y  +K A + 
Sbjct: 129 TEIMKV--QKN---GYIFNVASRAAKY----------------GFADGGIYGSTKFALLG 167

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            A  L R L   G  I   ++ PG + T++ + 
Sbjct: 168 LAESLYRELAPLG--IRVTTLCPGWVNTDMAKK 198

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  117 bits (295), Expect = 1e-31
 Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 25/210 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TG++SGIG   A   A  G H+V+  R +    +   ++ ++    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAV 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+++   V              +IL+NNAG       M  + +  +  +    +    L 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             L+  M+       G G II+ +S          ++               Y+ +K A 
Sbjct: 125 RGLVPGMRA-----RGGGAIIHNASIC-------AVQ--------PLWYEPIYNVTKAAL 164

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           ++ +  LA  + +D   I  N ++PG I T
Sbjct: 165 MMFSKTLATEVIKDN--IRVNCINPGLILT 192

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  117 bits (295), Expect = 1e-31
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 28/210 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG+T+GIG   A  L   G +V++  R      +  + I  + P A +  +  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL +    ++   +Y     +++ILINN GI     +  +  ++    F  N +    LT
Sbjct: 69  DLGTEQGCQDVIEKYP----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLT 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M +       EGR+I ++SE         I                YS +K   
Sbjct: 125 RSYLKKMIER-----KEGRVIFIASE-------AAI--------MPSQEMAHYSATKTMQ 164

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           +  +  LA         +T N++ PG+  T
Sbjct: 165 LSLSRSLAELTTGTN--VTVNTIMPGSTLT 192

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  115 bits (290), Expect = 5e-31
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 25/215 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VT  +SG+G  +A  LA  G  +++  R+    +     I   +  A+VD +  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+     +     +        +IL+ + G    G    L  ++ +  +         + 
Sbjct: 66  DIREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
               + M +      G GR++ + S                     +      +  +L  
Sbjct: 125 RRAAEQMVE-----KGWGRMVYIGSVTLL---------------RPWQDLALSNIMRLPV 164

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           I     LA  L   G  +T N+V P  I T+ +R 
Sbjct: 165 IGVVRTLALELAPHG--VTVNAVLPSLILTDRVRS 197

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  116 bits (293), Expect = 6e-31
 Identities = 43/216 (19%), Positives = 76/216 (35%), Gaps = 20/216 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA VTG  +G+G    R L  +G  V +      +      T+  E    +V  ++L
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++S    +  A E   +   ++IL NNAG+         S D+ +     N  G     
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 148 NLLLDTMKKTARKS-GGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              +  M +  +      G ++N +S                           Y+ +K A
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMA-------AFL--------AAGSPGIYNTTKFA 171

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               +  L   L +    I  + + PG + + I   
Sbjct: 172 VRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYAS 205

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  114 bits (288), Expect = 2e-30
 Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 25/230 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  SGIG  TA   A RG  +V+   D  A +     +  +        +  
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D+  L  +   A E       ++++ +NAGI+  G    ++ D+       +  G     
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  +     + G  G I   +S         G+            G   Y  +K   
Sbjct: 148 EAFLPRL----LEQGTGGHIAFTASFA-------GL--------VPNAGLGTYGVAKYGV 188

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 257
           +  A  LAR +K +G  I  + + P  + T ++ ++   R  +  + A P
Sbjct: 189 VGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATP 236

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  113 bits (286), Expect = 3e-30
 Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 29/219 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           S  T I+TG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQ-----FATNHLG 142
            D+++        +    Q  ++++L+NNAG      F  +  +  +         N   
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              +T  +   +  +       G I+NVSS         G +            F  Y+ 
Sbjct: 125 VIEMTKKVKPHLVASK------GEIVNVSSIVA------GPQ--------AQPDFLYYAI 164

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K A   +    A  L + G  I  NSV PG + T    
Sbjct: 165 AKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTN 201

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  113 bits (286), Expect = 4e-30
 Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 27/217 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHF 144
            D++  +   +  +    +  +++IL+NNAG              +  +  F  N     
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            +T    + + KT       G I+NVSS               +  P  ++G+  Y+ +K
Sbjct: 145 EMTQKTKEHLIKTK------GEIVNVSS--------------IVAGPQAHSGYPYYACAK 184

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A   +    A  L + G  +  NSV PGA+AT  + 
Sbjct: 185 AALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMG 219

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  113 bits (284), Expect = 6e-30
 Identities = 51/218 (23%), Positives = 76/218 (34%), Gaps = 30/218 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   IVTGA+ GIG E A  LA  G HVV+  R     + V      E+ +A    +  
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAG 85

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
            +  +     F ++       L++LI N         F     ++      N L + +LT
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 145

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              L  +K+        G I+ VSS  G                   Y    AYS SK A
Sbjct: 146 VAALPMLKQ------SNGSIVVVSSLAGKV----------------AYPMVAAYSASKFA 183

Query: 207 NILHA--NELARRLKEDGVDITANSVHPGAIATNIIRH 242
             L    + + +      V+++      G I T     
Sbjct: 184 --LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 219

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  112 bits (282), Expect = 7e-30
 Identities = 43/219 (19%), Positives = 74/219 (33%), Gaps = 34/219 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S   A+VTG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A   
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+     VR FA          +IL+NNAG    + F   + +    +            
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  ++        +  I+ V+S               +          A S ++ A 
Sbjct: 127 RAFLPQLESR-----ADAAIVCVNS---------------LLASQPEPHMVATSAAR-AG 165

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
           + +     A E A +       +  N +  G + +   R
Sbjct: 166 VKNLVRSMAFEFAPK------GVRVNGILIGLVESGQWR 198

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  111 bits (281), Expect = 8e-30
 Identities = 41/216 (18%), Positives = 82/216 (37%), Gaps = 33/216 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTG + GIG     VL       V  V  +A  +   + + ++    +   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTV--VYGVARSEAPLKKLKEKYGD-RFFYVVGD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLT 147
           ++  + ++   +     H +++ L+ NAG++        +  +  +  +  N      L 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            + L  +KKT       G ++ VSS   +                  ++ + AY  SK A
Sbjct: 119 GIALPELKKTN------GNVVFVSSDACNM----------------YFSSWGAYGSSKAA 156

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                N  A  L  +   + A +V PG + T++  +
Sbjct: 157 ----LNHFAMTLANEERQVKAIAVAPGIVDTDMQVN 188

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  110 bits (278), Expect = 1e-29
 Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 28/212 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVS 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
              SV  F+ +   +   +++++ NAG+        LS++        N LG +      
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           LD++K+T     G   ++  S    R                       Y  +K A    
Sbjct: 123 LDSLKRT-----GGLALVTTSDVSAR----------------LIPYGGGYVSTKWA--AR 159

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           A  L R  + +  D+    + PGA+ T     
Sbjct: 160 A--LVRTFQIENPDVRFFELRPGAVDTYFGGS 189

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  111 bits (280), Expect = 2e-29
 Identities = 48/221 (21%), Positives = 82/221 (37%), Gaps = 33/221 (14%)

Query: 33  TAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + ++TG   G+G    + L        H+    R+    K++++        + +  +E+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEI 79

Query: 90  DLSSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHF 144
           DL +  +     ++     +   LN+L NNAGI         +    +     TN +   
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 145 LLTNLLLDTMKKTARK------SGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           +L    L  +KK A+         G   IIN+SS    +  +         D   Y    
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT--------DGGMY---- 187

Query: 199 AYSQSKLA-NILHANELARRLKEDGVDITANSVHPGAIATN 238
           AY  SK A N      L+  L      I   S+HPG + T+
Sbjct: 188 AYRTSKSALNAA-TKSLSVDLYPQR--IMCVSLHPGWVKTD 225

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  111 bits (279), Expect = 2e-29
 Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 38/241 (15%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK 69
           GP   S ++T +     +   G  A++TGAT GIG + AR  A  G  +V+  RD++   
Sbjct: 1   GPG--SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58

Query: 70  DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-L 127
             +  + ++     V  + +DL+   +    A         L++L+NNAGI    P +  
Sbjct: 59  AARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT 117

Query: 128 SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFD 186
                +   A N     LL + +   M      +G  G II V+S               
Sbjct: 118 DPQLFDATIAVNLRAPALLASAVGKAM----VAAGEGGAIITVASAAALA---------- 163

Query: 187 KINDPSGYNGFRAYSQSKLANILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
                       AY  SK A ++      A EL          I ANSV P  + T + +
Sbjct: 164 ------PLPDHYAYCTSK-AGLVMATKVLARELGPH------GIRANSVCPTVVLTEMGQ 210

Query: 242 H 242
            
Sbjct: 211 R 211

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  110 bits (276), Expect = 5e-29
 Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 35/218 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D++    +R+   +      +L+IL+NNAG+          N E     N +     T L
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE------KNWEKTLQINLVSVISGTYL 119

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            LD M K  +  G  G IIN+SS               +           Y  SK   + 
Sbjct: 120 GLDYMSK--QNGGEGGIIINMSS---------------LAGLMPVAQQPVYCASKHGIVG 162

Query: 210 ------HANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  A  L          +  N++ PG + T I+ 
Sbjct: 163 FTRSAALAANLMNS------GVRLNAICPGFVNTAILE 194

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  109 bits (275), Expect = 6e-29
 Identities = 52/215 (24%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T I+TG   G+G E AR     G  VV+       G        +E+         L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT----ARELG-DAARYQHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++     +   +    +   ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  MK       G G I+N+SS         G+         G     +Y  SK   
Sbjct: 119 KTVIPAMKDA-----GGGSIVNISSA-------AGLM--------GLALTSSYGASKWGV 158

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
              +   A  L  D   I  NSVHPG   T +   
Sbjct: 159 RGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAE 191

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  109 bits (276), Expect = 7e-29
 Identities = 53/216 (24%), Positives = 80/216 (37%), Gaps = 32/216 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG    R     G  VV+  +D + G      + +E+P A    +  
Sbjct: 8   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLL 146
           D++    V+   SE   +  +L+ ++NNAG    P      S          N LG + L
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T L L  ++K       +G +IN+SS         G          G      Y  +K A
Sbjct: 122 TKLALPYLRK------SQGNVINISSLV-------GAI--------GQAQAVPYVATKGA 160

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  LA      G  +  N + PG I T +   
Sbjct: 161 VTAMTKALALDESPYG--VRVNCISPGNIWTPLWEE 194

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  109 bits (274), Expect = 9e-29
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
           +    +VTGA+ GIG E A   A  G  V++  R+    + V   I +E     +   ++
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHFL 145
           L   +  + +  A    + + +L+ +++NAG++G    +S+ N ++       N    F+
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK- 204
           LT  LL  +     KS   G ++  SS   R                G   + AY+ SK 
Sbjct: 131 LTQALLPLL----LKSDA-GSLVFTSSSVGR---------------QGRANWGAYAASKF 170

Query: 205 ----LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
               +  +L A+E  +R       +  N ++PG   T +  
Sbjct: 171 ATEGMMQVL-ADEYQQR-------LRVNCINPGGTRTAMRA 203

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  109 bits (274), Expect = 9e-29
 Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+V+G   G+G    R +   G  VV G      GK +      E+       + L
Sbjct: 6   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM----AAELA-DAARYVHL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D++  A  +            L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  MK+      G G IIN+SS        EG+         G      Y+ +K A 
Sbjct: 121 RAVVKPMKEA-----GRGSIINISSI-------EGLA--------GTVACHGYTATKFAV 160

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  A  L   G  I  NS+HPG + T +  
Sbjct: 161 RGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD 192

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  108 bits (273), Expect = 1e-28
 Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 31/214 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIV G T G+G  T R L   G  V++  R+ +    ++E         +V A+  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRS 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N  G F   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             L   +++        G I+  SS               + D  G+ G   YS SK A 
Sbjct: 122 QRLTPLIRE-------GGSIVFTSS---------------VADEGGHPGMSVYSASKAAL 159

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +  A+ LA  L   G  I  NSV PG I T    
Sbjct: 160 VSFASVLAAELLPRG--IRVNSVSPGFIDTPTKG 191

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  108 bits (273), Expect = 1e-28
 Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 30/213 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG  SG+G E  ++L   G  V     + AAG+ +      E+   +   +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL----AAEL-GERSMFVRHDVS 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           S A      +    +   LN+L+NNAGI   G       ++       N    F+     
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +  MK+      G G IIN++S                         +  YS SK A   
Sbjct: 123 IAAMKE-----TG-GSIINMASVSSWL----------------PIEQYAGYSASKAAVSA 160

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                A   ++ G  I  NS+HP  I T +++ 
Sbjct: 161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  108 bits (272), Expect = 2e-28
 Identities = 53/216 (24%), Positives = 76/216 (35%), Gaps = 28/216 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
            G  AI+TG T GIG   A      G  V++  R    G+       K +    ++   +
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA----AKSVGTPDQIQFFQ 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
            D S                  ++ L+NNAGI    +    +        A N  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           T L +  M    +  G    IIN+SS EG                  G     AY+ SK 
Sbjct: 121 TRLGIQRM----KNKGLGASIINMSSIEGFV----------------GDPSLGAYNASKG 160

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           A  + +   A        D+  N+VHPG I T ++ 
Sbjct: 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  108 bits (272), Expect = 2e-28
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 25/216 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
            G   +VTGA  GIG   AR  A  G  VV+  R  A+  +V + I     P   + A+ 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFL 145
           L+ ++    R  A+    +  +L+ L++NA I+G  TP   L  ++       N    F+
Sbjct: 73  LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFM 132

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           LT  LL  +    ++S     I   SS   R                G   + AY  SK 
Sbjct: 133 LTRALLPLL----KRSED-ASIAFTSSSVGR---------------KGRANWGAYGVSKF 172

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           A       LA  L+     + ANS++PGA  T +  
Sbjct: 173 ATEGLMQTLADELEGVT-AVRANSINPGATRTGMRA 207

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  108 bits (271), Expect = 2e-28
 Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 27/213 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    I   A  GIG +T+R L  R +   + +  +     + E      P   +     
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTY 62

Query: 90  DLS-SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTN 148
           D++  +A  +    +   Q   ++ILIN AGI+          IE   A N  G    T 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTT 116

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            +LD   K  RK G  G I N+ S         G            +    YS SK A +
Sbjct: 117 AILDFWDK--RKGGPGGIIANICS-------VTGFN--------AIHQVPVYSASKAAVV 159

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIR 241
              N LA+     G  +TA S++PG   T ++ 
Sbjct: 160 SFTNSLAKLAPITG--VTAYSINPGITRTPLVH 190

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  107 bits (270), Expect = 4e-28
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 33/219 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    ++TG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     
Sbjct: 12  TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+S  A V  + +    +  +++   NNAGI G   P    +    +   + N  G FL 
Sbjct: 72  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              +L  M++      G G ++N +S G       GIR        G      Y+ +K  
Sbjct: 132 LEKVLKIMREQ-----GSGMVVNTASVG-------GIR--------GIGNQSGYAAAKHG 171

Query: 207 NIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +      A E  R        I  N++ PGAI T ++ 
Sbjct: 172 VVGLTRNSAVEYGRY------GIRINAIAPGAIWTPMVE 204

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  107 bits (270), Expect = 5e-28
 Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 31/211 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGATSGIG   A+     G  V +  R            + EI       ++ D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA----IAEIG-GGAVGIQADSA 85

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +LA +     +   +  ++++L  NAG     P   ++++  +  F  N  G        
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLF----- 140

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
             T++K          ++   S                   +G   F  Y+ SK A    
Sbjct: 141 --TVQKALPLLARGSSVVLTGS---------------TAGSTGTPAFSVYAASKAALRSF 183

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIR 241
           A      LK+ G  I  N++ PG   T  + 
Sbjct: 184 ARNWILDLKDRG--IRINTLSPGPTETTGLV 212

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  106 bits (266), Expect = 5e-28
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 41/214 (19%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           +  ++TGAT G+G   AR  AL+G  +++  R   A  ++   +          A+  DL
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNL 149
           +     +    E       L++L++  G  G        +D +E   A +     L    
Sbjct: 52  ADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAF 103

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +L   +          R +   +                       GF AY+ +K A   
Sbjct: 104 VLKHARF-----QKGARAVFFGAYP-------RYV--------QVPGFAAYAAAKGALEA 143

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
           +     + L  +GV +    V   A+AT +    
Sbjct: 144 YLEAARKELLREGVHLVL--VRLPAVATGLWAPL 175

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  107 bits (269), Expect = 5e-28
 Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 42/222 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +    +++G    +GT  AR  A +G  +V+  R +   +DV     K++     +  ++
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDV----AKQVTDTGRRALSV 65

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             D++  A V +   E    + +++++INNA  +    PF   + +++         G  
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL 125

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            L       +++       +G ++NV+S                        + AY  +K
Sbjct: 126 RLIQGFTPALEE------SKGAVVNVNSMV-------VRH--------SQAKYGAYKMAK 164

Query: 205 LANILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
            + +L      A EL  +       I  NSV PG I    ++
Sbjct: 165 -SALLAMSQTLATELGEK------GIRVNSVLPGYIWGGTLK 199

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  106 bits (268), Expect = 6e-28
 Identities = 46/216 (21%), Positives = 74/216 (34%), Gaps = 30/216 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
           T  V GA   IG E A+  A  G  V  G R+          +V EI +A  ++ A  LD
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVARSLD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTN 148
             +   V  F +  +  H  L + I N G     P +  +       +       F+   
Sbjct: 65  ARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                M        G+G+I    +          +R        G +GF A++ +K    
Sbjct: 124 ESARLMLA-----HGQGKIFFTGATA-------SLR--------GGSGFAAFASAKFGLR 163

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
             A  +AR L    +   A+ +    + T  +R   
Sbjct: 164 AVAQSMARELMPKNI-HVAHLIIDSGVDTAWVRERR 198

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  107 bits (269), Expect = 6e-28
 Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 35/214 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AI+TGA +GIG E A   A  G  VV+   +  A   V + I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           D++S   +   A     +  +++IL+NNAG     PF +   +    +  N    F L+ 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
           L+   M+K      G G I+ ++S                          +Y+ SK A  
Sbjct: 128 LVAPEMEKN-----GGGVILTITSMA-------AEN--------KNINMTSYASSK-AAA 166

Query: 209 LH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            H     A +L  +      +I  N + PGAI T
Sbjct: 167 SHLVRNMAFDLGEK------NIRVNGIAPGAILT 194

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  106 bits (268), Expect = 8e-28
 Identities = 58/221 (26%), Positives = 84/221 (38%), Gaps = 39/221 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                IVTGA SGIG   A+  AL    VV           +    V+E+     +V  +
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQI----VQELRGMGKEVLGV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
           + D+S    V  F       + ++++L NNAGIM   TP   +S +  E   A N    F
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
             +  ++  M K      G+G I+N +S         GIR        G      Y+ +K
Sbjct: 122 YSSRAVIPIMLKQ-----GKGVIVNTASIA-------GIR--------GGFAGAPYTVAK 161

Query: 205 LANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
              I      A     +       I A +V PG + TNI  
Sbjct: 162 HGLIGLTRSIAAHYGDQ------GIRAVAVLPGTVKTNIGL 196

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  106 bits (268), Expect = 9e-28
 Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA SG G   A+  A  G  VV+  RD A  + V      EI      A+  
Sbjct: 8   EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV----AGEIG-DAALAVAA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLL 146
           D+S  A V         +  +++IL+NNAGI   P    ++  +  +     N  G +L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 147 TNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           T+ L+   K+    + G+   I+NV+S G         R               Y+ +K 
Sbjct: 123 TSKLIPHFKE--NGAKGQECVILNVASTG-------AGR--------PRPNLAWYNATKG 165

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
             +     LA  L      I   +++P A  T ++ 
Sbjct: 166 WVVSVTKALAIELAPAK--IRVVALNPVAGETPLLT 199

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  105 bits (265), Expect = 1e-27
 Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 36/216 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTGAT G+G E  + L+   +   +G        +    + +      V+ +E 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIES 55

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+           +       ++ L++ A +   T     S          N +    L+
Sbjct: 56  DIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELS 114

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
             LL  ++         G +I ++S  G+                  + G   Y+ SK A
Sbjct: 115 RQLLPALRA------ASGCVIYINSGAGNG----------------PHPGNTIYAASKHA 152

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               A+   +    +G  I  ++V PG   T +++ 
Sbjct: 153 LRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQG 186

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  106 bits (266), Expect = 2e-27
 Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 29/217 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           DLS   ++  FA+     H + ++L+NNAG+     P   +     +   A N    +LL
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                  M     K    G IIN+SS  G                        AY+ SK 
Sbjct: 146 LRAFAPAMIA--AKR---GHIINISSLAGKN----------------PVADGAAYTASKW 184

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                    A  L++    +  + V PG++ T     
Sbjct: 185 GLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVG 219

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  105 bits (265), Expect = 2e-27
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 36/220 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-- 87
            G   ++TG+++G+G   A   A     VV+  R          ++++EI     +A+  
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE---ANSVLEEIKKVGGEAIAV 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
           + D++  + V N       +  +L+++INNAG+        +S  +      TN  G FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            +   +        ++  +G +IN+SS               +++   +  F  Y+ SK 
Sbjct: 123 GSREAIKYF----VENDIKGTVINMSS---------------VHEKIPWPLFVHYAASKG 163

Query: 206 ANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
              L     A E A +       I  N++ PGAI T I  
Sbjct: 164 GMKLMTETLALEYAPK------GIRVNNIGPGAINTPINA 197

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  106 bits (266), Expect = 2e-27
 Identities = 67/215 (31%), Positives = 94/215 (43%), Gaps = 25/215 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E 
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEA 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+S    +RN   +  ++   L+I++ NAGI G   P   L     +   A N  G FL 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            +L +  +K+      G G I+ VSS         G R           G  AY+ +K A
Sbjct: 145 LHLTVPYLKQR-----GGGAIVVVSSIN-------GTR------TFTTPGATAYTATKAA 186

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +    +LA  L +    I  N+V PGAI TNI  
Sbjct: 187 QVAIVQQLALELGKHH--IRVNAVCPGAIETNISD 219

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  105 bits (264), Expect = 3e-27
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
             ++TGA+ GIG   AR L + G  +++G R     +   E I  EI  A     A  LD
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTN 148
           ++   SV  FA        ++++L+NNAG+M    +  +  D  E     N  G      
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIG 121

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            +L  M+  A++S   G+IIN+ S G                         Y  +K A  
Sbjct: 122 AVLPIME--AQRS---GQIINIGSIGALSVV------------PTAAV---YCATKFA-- 159

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATN 238
                ++  L+++  +I    V+PG + + 
Sbjct: 160 --VRAISDGLRQESTNIRVTCVNPGVVESE 187

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  104 bits (263), Expect = 4e-27
 Identities = 53/214 (24%), Positives = 80/214 (37%), Gaps = 35/214 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +   AIVTGA +GIG   A   A  G  VV+        + V   I +     K   +E 
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLEC 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +++              Q  ++ +L+NNAG     PF +   + E  F  N    F L+ 
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ 128

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
           L    M+K      G G I+N+SS               +   +      +Y  SK A +
Sbjct: 129 LAAPHMQKA-----GGGAILNISS---------------MAGENTNVRMASYGSSK-AAV 167

Query: 209 LH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            H     A ++          I  N++ PGAI T
Sbjct: 168 NHLTRNIAFDVGPM------GIRVNAIAPGAIKT 195

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  104 bits (262), Expect = 6e-27
 Identities = 48/215 (22%), Positives = 79/215 (36%), Gaps = 38/215 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G +A++TG+  GIG   A      G  V +   DI   +        EI      A+++
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA----AAEI-GPAAYAVQM 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   S+    +        L+IL+NNA +    P + +++++ E  FA N  G     
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                 M    R     G+IIN++S  G R                G      Y  +K A
Sbjct: 122 QAAARQMIAQGRG----GKIINMASQAGRR----------------GEALVAIYCATKAA 161

Query: 207 NIL----HANELARRLKEDGVDITANSVHPGAIAT 237
            I        +L +        I  N++ PG +  
Sbjct: 162 VISLTQSAGLDLIKH------RINVNAIAPGVVDG 190

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  104 bits (261), Expect = 7e-27
 Identities = 53/214 (24%), Positives = 78/214 (36%), Gaps = 28/214 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SG G   A     RG  V          ++   T        KV  +  D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVA 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLT 147
               V    +    Q   +++L+NNAGI G            +  +   A N  G FL  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +L  M        G G I+N++S          +          + G  AY+ SK A 
Sbjct: 123 RAVLPHMLLQ-----GAGVIVNIASVA-------SLV--------AFPGRSAYTTSKGAV 162

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +     +A      G  I  N+V PG I T + +
Sbjct: 163 LQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQ 194

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  104 bits (261), Expect = 1e-26
 Identities = 55/217 (25%), Positives = 75/217 (34%), Gaps = 34/217 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG + GIG   A+ L   G  V +  RD  A  D    +          A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPA 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DLSS A  R  A        +L+IL+NNAG   G           E     N    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
             LL  ++++A       R+IN+ S  G      +                 AY  SK A
Sbjct: 145 QQLLPLLRRSASAENP-ARVINIGSVAGISAMGEQAY---------------AYGPSK-A 187

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATN 238
            +       A EL          I  N + PG   + 
Sbjct: 188 ALHQLSRMLAKELVGE------HINVNVIAPGRFPSR 218

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  103 bits (260), Expect = 1e-26
 Identities = 51/217 (23%), Positives = 77/217 (35%), Gaps = 31/217 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VT +T GIG   AR LA  G HVV+  R          T+  E     V     
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVC 70

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGHF 144
            +          +     H  ++IL++NA +   PF       +++  +     N     
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKILHVNVKATV 128

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L+T  ++  M+K      G G ++ VSS G                   +     Y+ SK
Sbjct: 129 LMTKAVVPEMEKR-----GGGSVLIVSSVG-------AYH--------PFPNLGPYNVSK 168

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A +     LA  L      I  N + PG I TN  +
Sbjct: 169 TALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQ 203

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  103 bits (259), Expect = 1e-26
 Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 39/214 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    +VTG + GIG     +L     H V+ +            I +   +  +  ++ 
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKA 51

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL+    + N      I++   + +  NAGI+       +  ++I+     N        
Sbjct: 52  DLTKQQDITNVLDI--IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             L + +K           I+   S                          AY+ SK A 
Sbjct: 110 KGLENNLKV-------GASIVFNGS---------------DQCFIAKPNSFAYTLSKGAI 147

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                 LA  L +    I  N+V PG + T++ R
Sbjct: 148 AQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYR 179

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  104 bits (261), Expect = 1e-26
 Identities = 54/212 (25%), Positives = 75/212 (35%), Gaps = 26/212 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SGIG   A + A  G  VV+  R+  A  ++ + I       +  A+  D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 149
             A           +   L+   NNAG +G       LS +       TN    FL    
Sbjct: 68  DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKY 127

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            +  +       GG G +   SS     A              G+ G   Y+ SK   I 
Sbjct: 128 QVPAI----AALGG-GSLTFTSSFVGHTA--------------GFAGVAPYAASKAGLIG 168

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIR 241
               LA  L   G  I  N++ PG   T    
Sbjct: 169 LVQALAVELGARG--IRVNALLPGGTDTPANF 198

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  103 bits (260), Expect = 1e-26
 Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 29/214 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    IVTG  SGIG  TA + A  G +VV+   +  A   V      EI  +K   + +
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV----ANEIG-SKAFGVRV 80

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+SS     +   +   +  ++++L+NNAG    G    + ++  +   + N  G FL +
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  M++      G G IIN +S                          AY  SK A 
Sbjct: 141 KYVIPVMRRN-----GGGSIINTTSYT-------ATS--------AIADRTAYVASKGAI 180

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                 +A    ++G  I  N+V PG I +    
Sbjct: 181 SSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFT 212

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  103 bits (260), Expect = 2e-26
 Identities = 49/221 (22%), Positives = 75/221 (33%), Gaps = 38/221 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AIVTGA SG+G   A  LA  G  V +  R + A ++       EI       +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET----AAEIG-DDALCVPT 81

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLL 146
           D++   SVR   +    +  ++++L NNAG       +   +    +    TN  G FL 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           T      MK   ++  G GRIIN  S                            Y+ +K 
Sbjct: 142 TQEAFRVMKA--QEPRG-GRIINNGSISATS----------------PRPYSAPYTATKH 182

Query: 206 ANIL----HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           A        + +          DI    +  G   T + + 
Sbjct: 183 AITGLTKSTSLDGRVH------DIACGQIDIGNADTPMAQK 217

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  102 bits (258), Expect = 2e-26
 Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 45/218 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG  T + L   G  VV   R  A    +            ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA +    PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            ++   +       G  G I+NVSS    R                       Y  +K A
Sbjct: 116 QIVARGL----IARGVPGAIVNVSSQCSQR----------------AVTNHSVYCSTKGA 155

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATNI 239
            +       A EL          I  N+V+P  + T++
Sbjct: 156 -LDMLTKVMALELGPH------KIRVNAVNPTVVMTSM 186

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  103 bits (259), Expect = 2e-26
 Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 37/214 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A+VTG   GIG   +  LA  G  +   V D+   ++     +K I +A  K   + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIA--VADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++  A+  +   E   +    ++L+NNAGI    P + +++++++  ++ N    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 149 LLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                  +   K    G+IIN +S    +                G+    AYS +K A 
Sbjct: 122 AASRKFDELGVK----GKIINAASIAAIQ----------------GFPILSAYSTTKFAV 161

Query: 208 IL----HANELARRLKEDGVDITANSVHPGAIAT 237
                  A ELA +        T N+  PG + T
Sbjct: 162 RGLTQAAAQELAPK------GHTVNAYAPGIVGT 189

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  103 bits (260), Expect = 2e-26
 Identities = 42/223 (18%), Positives = 70/223 (31%), Gaps = 44/223 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A++TG  SG+G          G  V +  +     +++               +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL----EVAHG-GNAVGVVG 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQF----ATNHLG 142
           D+ SL   +  A        +++ LI NAGI         L +D I+  F      N  G
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
           +       L  +          G ++   S         G             G   Y+ 
Sbjct: 119 YIHAVKACLPALVS------SRGSVVFTISNA-------GFY--------PNGGGPLYTA 157

Query: 203 SKLANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K A +      A ELA         +  N V PG + T++  
Sbjct: 158 TKHAVVGLVRQMAFELAPH-------VRVNGVAPGGMNTDLRG 193

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  103 bits (260), Expect = 2e-26
 Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 36/221 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAME 88
              T +VTG  SGIG   A  L   G  V++  R+        + +     +   +    
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT--PFM-LSKDNIELQFATNHLGHFL 145
            D+++              H +L+ +++ AG      P   +  +        N  G   
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +       M +     GG G  + +SS                     +  F AY  +K 
Sbjct: 130 VLKHAAREMVR-----GGGGSFVGISSIA-------ASN--------THRWFGAYGVTK- 168

Query: 206 ANILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
           + + H     A+EL          +  NS+ PG I T+++ 
Sbjct: 169 SAVDHLMQLAADELGAS------WVRVNSIRPGLIRTDLVA 203

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  102 bits (257), Expect = 2e-26
 Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 45/218 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SGL A+VTGA  GIG +T + L   G  VV   R  +    + +          ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA + +  PF+ ++K+  +  F+ N    F ++
Sbjct: 60  DLGDWDATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            ++   M       G  G I+NVSS   H                  +     YS +K A
Sbjct: 116 QMVARDM----INRGVPGSIVNVSSMVAHV----------------TFPNLITYSSTKGA 155

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATNI 239
            +       A EL          I  NSV+P  + T++
Sbjct: 156 -MTMLTKAMAMELGPH------KIRVNSVNPTVVLTDM 186

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  103 bits (259), Expect = 2e-26
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 24/215 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +   + +  S    QH  ++I INNAG+      +  S    +  F  N L   + T   
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 153

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
             +MK+   ++  +G IIN++S  GHR+                 +    YS +K A  +
Sbjct: 154 YQSMKE---RNVDDGHIININSMSGHRV--------------LPLSVTHFYSATKYA--V 194

Query: 210 HA-NELARR-LKEDGVDITANSVHPGAIATNIIRH 242
            A  E  R+ L+E    I A  + PG + T     
Sbjct: 195 TALTEGLRQELREAQTHIRATCISPGVVETQFAFK 229

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  101 bits (255), Expect = 3e-26
 Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 41/213 (19%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TGA+SG+G E A++    G    +  R     +    T+   + S  V     DL+
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCL-SNNVGYRARDLA 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLL 150
           S   V     +        + ++++AG            + I+     N      +   L
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG----FRAYSQSKLA 206
           +   K   +       ++ + S   +    +          S Y       +   +S   
Sbjct: 115 VKRYK--DQPVN----VVMIMSTAAQQPKAQE---------STYCAVKWAVKGLIES--- 156

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNI 239
                  +   LK   + I A  V+PG +AT  
Sbjct: 157 -------VRLELKGKPMKIIA--VYPGGMATEF 180

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  102 bits (256), Expect = 3e-26
 Identities = 44/218 (20%), Positives = 76/218 (34%), Gaps = 31/218 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG---KDVKETIVKEIPSA--KVDAM 87
             ++TGA  GIG   A   A    H       +          E I  E  +     D +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             D+S +A VR   +    ++  ++ L+NNAG+        L++++ +    TN  G F 
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           LT  L   M++  + S   G I  ++S    +                 +     Y  SK
Sbjct: 124 LTQALFALMER--QHS---GHIFFITSVAATK----------------AFRHSSIYCMSK 162

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                    +    ++    +    V PGA+ T +   
Sbjct: 163 FGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGK 198

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  102 bits (257), Expect = 3e-26
 Identities = 52/212 (24%), Positives = 77/212 (36%), Gaps = 35/212 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA  GIG   A  L   G  V +   + A  K V   I +        A+++D+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 61

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
               V     +        ++++NNAG+   TP   ++ + ++  +  N  G        
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           ++  KK        G+IIN  S  GH                 G      YS SK A   
Sbjct: 122 VEAFKKEGHG----GKIINACSQAGHV----------------GNPELAVYSSSKFAVRG 161

Query: 210 ----HANELARRLKEDGVDITANSVHPGAIAT 237
                A +LA         IT N   PG + T
Sbjct: 162 LTQTAARDLAPL------GITVNGYCPGIVKT 187

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  102 bits (256), Expect = 4e-26
 Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 47/223 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA+ GIG   A+ LA  G  V +        K+  E  V EI S      ++
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 88  ELDLSSLASVRNFASE------YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATN 139
             +L SL  V    S             + +ILINNAGI         ++   +   + N
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 122

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
               F +    L  ++          RIIN+SS   R+                   F A
Sbjct: 123 AKAPFFIIQQALSRLRD-------NSRIINISSAATRI---------------SLPDFIA 160

Query: 200 YSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
           YS +K     +   L A +L  R       IT N++ PG + T
Sbjct: 161 YSMTKGAINTMTFTL-AKQLGAR------GITVNAILPGFVKT 196

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  102 bits (256), Expect = 4e-26
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 34/210 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   I+T A  GIG   A   A  G  V+    + +  +++++          +    L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++    +  FA+E      +L++L N AG +  GT     + + +     N    +L+ 
Sbjct: 58  DVTKKKQIDQFANEVE----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M          G IIN+SS    +               G      YS +K A 
Sbjct: 114 KAFLPKMLAQ-----KSGNIINMSSVASSVK--------------GVVNRCVYSTTKAAV 154

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIAT 237
           I     +A    + G  I  N V PG + T
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDT 182

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  102 bits (256), Expect = 4e-26
 Identities = 44/219 (20%), Positives = 77/219 (35%), Gaps = 36/219 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G   ++TG++ GIG  TAR+ A  G  V +  R   A     +  +  + +        
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN---IDETIASMRADGGDAAFF 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             DL++  + +    E+  +   +++LINNAG +    P   +     +     N     
Sbjct: 63  AADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           + T   L  +   A+ SG    +I+  S  GH                 G  G   Y  +
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHT---------------GGGPGAGLYGAA 167

Query: 204 KLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           K A +        +   +        +  N V PG + T
Sbjct: 168 K-AFLHNVHKNWVDFHTKD------GVRFNIVSPGTVDT 199

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  101 bits (254), Expect = 9e-26
 Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 41/217 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   AIVTGA+ GIG   A  LA  G  VV+     A      E +  +I +A  K    
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINY---AGKAAAAEEVAGKIEAAGGKALTA 82

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
           + D+S  A+VR   +        +++L+NNAGIM  T          +   A N  G F 
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK- 204
                   ++         GRIIN+S+                     +  +  Y+ +K 
Sbjct: 143 TLREAAQRLRVG-------GRIINMST---------------SQVGLLHPSYGIYAAAKA 180

Query: 205 ----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
               + ++L + EL  R      DIT N+V PG  AT
Sbjct: 181 GVEAMTHVL-SKELRGR------DITVNAVAPGPTAT 210

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  101 bits (254), Expect = 1e-25
 Identities = 58/232 (25%), Positives = 85/232 (36%), Gaps = 40/232 (17%)

Query: 15  SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET 74
           + +   + +   I  +G TA VTG + GIG   A+ LAL G  V +         +  + 
Sbjct: 15  TENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVAL---TYVNAAERAQA 71

Query: 75  IVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKD 130
           +V EI  A  +  A+  D     ++     E       L+IL+N+AGI    P    +  
Sbjct: 72  VVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA 131

Query: 131 NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND 190
           + +   A N    F+        +          GRII + S    L             
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELV------------ 172

Query: 191 PSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
              + G   YS SK     L   L A +L  R       IT N VHPG+  T
Sbjct: 173 --PWPGISLYSASKAALAGLTKGL-ARDLGPR------GITVNIVHPGSTDT 215

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  100 bits (252), Expect = 1e-25
 Identities = 49/209 (23%), Positives = 80/209 (38%), Gaps = 32/209 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TGA+ GIG  TAR+L  +G  V +  RD    +   + +  E+  A    +  D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAELEGAL--PLPGDVR 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLL 150
                    +       +L+ L+NNAG+     +  L+ +   L   TN  G FL     
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +  + +      G G I+NV S  G                   + G  AY+ SK    L
Sbjct: 121 VPALLRR-----GGGTIVNVGSLAGKN----------------PFKGGAAYNASKFG--L 157

Query: 210 HANELARRLKEDGVDITANSVHPGAIATN 238
                A  L     ++   +V PG++ T 
Sbjct: 158 LGLAGAAMLDLREANVRVVNVLPGSVDTG 186

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  102 bits (256), Expect = 1e-25
 Identities = 51/241 (21%), Positives = 86/241 (35%), Gaps = 41/241 (17%)

Query: 33  TAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
             ++TG +SGIG   A  LA    +   V   +RD+     + E       P   ++ ++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
           LD+    SV        +   ++++L+ NAG+  +G    L +D +      N +G   +
Sbjct: 64  LDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
               L  MK+  R S   GR++   S G  +             P  +N    Y  SK  
Sbjct: 122 LQAFLPDMKR--RGS---GRVLVTGSVGGLMGL-----------P--FND--VYCASK-- 159

Query: 207 NILHANE-----LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAG 261
               A E     LA  L   GV ++   +  G + T       L      +         
Sbjct: 160 ---FALEGLCESLAVLLLPFGVHLSL--IECGPVHTA-FMEKVLGSPEEVLDRTDIHTFH 213

Query: 262 K 262
           +
Sbjct: 214 R 214

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  100 bits (251), Expect = 2e-25
 Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 39/228 (17%)

Query: 17  SSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV 76
              +  +           +V G +  +G E  +    +  + +          D      
Sbjct: 8   HHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH----- 62

Query: 77  KEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIE 133
                    +  +  S    +++   + N +  +++  +  AG    G         +++
Sbjct: 63  ---------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
                N    F   ++    + +        G  +   +          +          
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLNQG-------GLFVLTGASA-------ALN--------R 151

Query: 194 YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +G  AY  +K A      +LA          T+  + P  + T   R
Sbjct: 152 TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR 199

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  101 bits (253), Expect = 2e-25
 Identities = 53/225 (23%), Positives = 84/225 (37%), Gaps = 46/225 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
              TA++TG+TSGIG   AR LA  G ++V+ G       + V + +     S  V    
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHP 82

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D++  + + +  +    +    +IL+NNAG+           +  +   A N    F  
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
               +  MKK      G GRIIN++S  G                        AY  +K 
Sbjct: 143 IRGAIPPMKK-----KGWGRIINIASAHGLV----------------ASPFKSAYVAAK- 180

Query: 206 ANILH---------ANELARRLKEDGVDITANSVHPGAIATNIIR 241
               H         A E+A         +T NS+ PG + T ++ 
Sbjct: 181 ----HGIMGLTKTVALEVAES------GVTVNSICPGYVLTPLVE 215

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  101 bits (253), Expect = 2e-25
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 29/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AIVTGA +GIG   AR LA  G HV+    D  A          +I      A  +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA----ATKIG-CGAAACRV 82

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    +             ++ L+ NAG++     +  + ++ +   A N  G +L T
Sbjct: 83  DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 M     + GG G I+N+SS         G             G  AY  SK   
Sbjct: 143 KHAAPRM----IERGG-GAIVNLSSLA-------GQV--------AVGGTGAYGMSKAGI 182

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           I  +   A  L+  G  I +N++ P  + T + + 
Sbjct: 183 IQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQT 215

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  101 bits (253), Expect = 2e-25
 Identities = 42/216 (19%), Positives = 78/216 (36%), Gaps = 29/216 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KV 84
            G T  ++G + GIG   A+ +A  G +V +  +       +  TI    KEI  A  + 
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 142
             +  D+    +V    ++   Q   ++I +NNA  +       +     +L       G
Sbjct: 68  LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRG 127

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            + ++   +  MK           I+ +S                I     +     Y  
Sbjct: 128 TYAVSQSCIPHMKG-----RDNPHILTLSP--------------PIRLEPKWLRPTPYMM 168

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPG-AIAT 237
           +K    L A  +A  L++ G  I +N++ P   +AT
Sbjct: 169 AKYGMTLCALGIAEELRDAG--IASNTLWPRTTVAT 202

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  100 bits (252), Expect = 2e-25
 Identities = 48/215 (22%), Positives = 79/215 (36%), Gaps = 35/215 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D++S  +V            +++ L NNAG  G   P      D+       N  G F +
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              +   M          GRI+N +S         G++        G     AY  SK A
Sbjct: 124 LKAVSRQMITQ-----NYGRIVNTASMA-------GVK--------GPPNMAAYGTSKGA 163

Query: 207 NIL----HANELARRLKEDGVDITANSVHPGAIAT 237
            I      A +LA        +I  N++ PG +  
Sbjct: 164 IIALTETAALDLAPY------NIRVNAISPGYMGP 192

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  100 bits (252), Expect = 2e-25
 Identities = 48/222 (21%), Positives = 72/222 (32%), Gaps = 36/222 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  +G+G   A+ L+  G  VV+  R           I        V A+  
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVC 90

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+     V    +    +  +L++L+NNAG      P   ++ +      A N  G FL 
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           T      MK    +    GRIIN  S                            Y+ +K 
Sbjct: 151 TQHAFRMMKAQTPRG---GRIINNGSISAQT----------------PRPNSAPYTATK- 190

Query: 206 ANILH-----ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             I       A +          DI    +  G  AT++   
Sbjct: 191 HAITGLTKSTALDGRMH------DIACGQIDIGNAATDMTAR 226

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  100 bits (252), Expect = 2e-25
 Identities = 52/216 (24%), Positives = 80/216 (37%), Gaps = 31/216 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AI+TGA  GIG ET+RVLA  G  VV+                  +         +
Sbjct: 10  ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA----AASVG-RGAVHHVV 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFL 145
           DL++  SVR           +L+I+ NNA       ML    + D  +  F  N  G  L
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +    +  +      +GG G I+N+SS                     Y+   AY+ +K 
Sbjct: 125 MCKYAIPRL----ISAGG-GAIVNISSAT-------AHA--------AYDMSTAYACTKA 164

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           A       +A +    G  +  N++ PG + T  + 
Sbjct: 165 AIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLE 198

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  100 bits (252), Expect = 3e-25
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 30/227 (13%)

Query: 18  STAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKET 74
           S   +  + +     T ++TGA++GIG  TA          + +++  R +   +++K+T
Sbjct: 22  SQGRKAAERLAKK--TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 75  IVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDN 131
           I +E P+AKV   +LD++    ++ F      +   ++IL+NNAG  +G+  +  ++ ++
Sbjct: 80  IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139

Query: 132 IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP 191
           I+  F TN      +T  +L   +         G I+N+ S   R AY  G         
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRDAYPTG--------- 185

Query: 192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN 238
           S Y        SK A  + A   + R +     I    + PG + T 
Sbjct: 186 SIYCA------SKFA--VGAFTDSLRKELINTKIRVILIAPGLVETE 224

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  100 bits (250), Expect = 3e-25
 Identities = 47/220 (21%), Positives = 77/220 (35%), Gaps = 39/220 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +G   +VTGA+ GIG   A  L   G  V +  R +   + V     +E  S   +   +
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV----AQEAQSLGGQCVPV 59

Query: 88  ELDLSSLASVRNFASEYNIQHH-QLNILINNAGIM--------GTPFM-LSKDNIELQFA 137
             D S  + VR+   + + +   +L++L+NNA              F        +    
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
               GH+  +      M        G+G I+ +SS G                   Y   
Sbjct: 120 VGLRGHYFCSVYGARLMVP-----AGQGLIVVISSPGSL----------------QYMFN 158

Query: 198 RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
             Y   K A    A + A  L+  G  ++  S+ PG + T
Sbjct: 159 VPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQT 196

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 99.9 bits (250), Expect = 3e-25
 Identities = 48/214 (22%), Positives = 72/214 (33%), Gaps = 32/214 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG   A+  A  G  V +        +  +               ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA--------IGGAFFQV 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL        F  E      ++++L+NNA I      + +           N      L+
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            L    M+K      G G I+NV+S         G+               AY+ SK   
Sbjct: 117 ALAAREMRKV-----GGGAIVNVASVQ-------GLF--------AEQENAAYNASKGGL 156

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +     LA  L      I  N+V PGAIAT  + 
Sbjct: 157 VNLTRSLALDLAPLR--IRVNAVAPGAIATEAVL 188

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  100 bits (251), Expect = 3e-25
 Identities = 50/216 (23%), Positives = 79/216 (36%), Gaps = 45/216 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTG +SGIG      L   G  VV    D  +  +V             D  ++D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------------SDHFKIDVT 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +   V+    +   ++ +++IL+NNAGI   +P      +        N  G +L+    
Sbjct: 64  NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           +  M        G G IIN++S                          AY  SK A +  
Sbjct: 124 IPVMLAI-----GHGSIINIASVQ-------SYA--------ATKNAAAYVTSKHALLGL 163

Query: 211 ----ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               A + A +       I  N+V PG I T ++  
Sbjct: 164 TRSVAIDYAPK-------IRCNAVCPGTIMTPMVIK 192

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  100 bits (251), Expect = 3e-25
 Identities = 53/215 (24%), Positives = 79/215 (36%), Gaps = 35/215 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     +  E   ++     V+    
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 90  DLSSLASVRN-FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           DL S         +  ++   +LNIL+NNAG+ +       ++ +  +   TN    + L
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           + +    +K         G +I +SS               I   S       YS SK A
Sbjct: 138 SQIAYPLLKA-----SQNGNVIFLSS---------------IAGFSALPSVSLYSASKGA 177

Query: 207 NIL----HANELARRLKEDGVDITANSVHPGAIAT 237
                   A E A+       +I  NSV PG I T
Sbjct: 178 INQMTKSLACEWAKD------NIRVNSVAPGVILT 206

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  100 bits (251), Expect = 3e-25
 Identities = 49/237 (20%), Positives = 86/237 (36%), Gaps = 42/237 (17%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK 69
            PS    SS   + +  + G    A+ TGA  GIG   A  L  RG  VV+      +  
Sbjct: 2   APSADITSSGPSDASKPLAGK--VALTTGAGRGIGRGIAIELGRRGASVVVNY---GSSS 56

Query: 70  DVKETIVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM 126
              E +V E+     +  A++ D+S  + V     +       L+ +++N+G+      +
Sbjct: 57  KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL 116

Query: 127 -LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF 185
            ++++  +  F  N  G F +    L   ++        GRII  SS    +        
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-------GRIILTSSIAAVM-------- 161

Query: 186 DKINDPSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
                 +G      Y+ SK           A +   +       +T N + PG + T
Sbjct: 162 ------TGIPNHALYAGSKAAVEGFCRAF-AVDCGAK------GVTVNCIAPGGVKT 205

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 39/215 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    ++TGA+  +G   A  L   G  V++  R   A        V E+  A   A+  
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS-------VTELRQAGAVALYG 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTN 148
           D S    +  F      Q   L  +++NA            DN    F+ + L  +L+  
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                +            I+++S                     G +   AY  +K    
Sbjct: 139 HCEPLLTA-----SEVADIVHISD---------------DVTRKGSSKHIAYCATKAGLE 178

Query: 209 ----LHANELARRLKEDGVDITANSVHPGAIATNI 239
                 A   A         +  N + P  +    
Sbjct: 179 SLTLSFAARFAPL-------VKVNGIAPALLMFQP 206

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  101 bits (252), Expect = 5e-25
 Identities = 46/239 (19%), Positives = 89/239 (37%), Gaps = 29/239 (12%)

Query: 12  SGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV 71
            G      +  + +    +G T  +TGA+ GIG   A   A  G ++V+  +       +
Sbjct: 26  GGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL 85

Query: 72  KETI---VKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPF 125
             TI    +EI +   K     +D+     +     +   +   ++IL+NNA  +  T  
Sbjct: 86  LGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT 145

Query: 126 M-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
           +      ++L    N  G +L +   +  +KK          I+N+S   +         
Sbjct: 146 LDTPTKRLDLMMNVNTRGTYLASKACIPYLKK-----SKVAHILNISPPLNL-------- 192

Query: 185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH 242
                +P  +    AY+ +K    ++   +A   K    +I  N++ P  AI T  +  
Sbjct: 193 -----NPVWFKQHCAYTIAKYGMSMYVLGMAEEFKG---EIAVNALWPKTAIHTAAMDM 243

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 99.2 bits (248), Expect = 7e-25
 Identities = 44/216 (20%), Positives = 78/216 (36%), Gaps = 28/216 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KV 84
           SG T  +TGA+ GIG   A   A  G +V +  +   A   +  TI      + +A  + 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG 64

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 142
            A++ D+     VR   +        ++IL+NNA  +     +       +L    N  G
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARG 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            F+     L  + +          I+ ++                  +P+ +     Y+ 
Sbjct: 125 SFVCAQACLPHLLQ-----APNPHILTLAPPP-------------SLNPAWWGAHTGYTL 166

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPG-AIAT 237
           +K+   L    LA      G  +  N++ P   IAT
Sbjct: 167 AKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIAT 200

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 99.2 bits (248), Expect = 7e-25
 Identities = 45/218 (20%), Positives = 73/218 (33%), Gaps = 46/218 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                IVTGA+ GIG   A      G  V+                      AK D +E 
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIEC 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+++   V+        ++  +++L+NNAGI        +S          N  G++  +
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  M ++      +  I+N+SS                          AY  SK A 
Sbjct: 114 KFAIPYMIRS-----RDPSIVNISSVQ-------ASI--------ITKNASAYVTSKHAV 153

Query: 208 ILH----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
           I      A + A         +  N+V P  I T ++R
Sbjct: 154 IGLTKSIALDYAPL-------LRCNAVCPATIDTPLVR 184

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 99.2 bits (248), Expect = 8e-25
 Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 42/218 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+  GIG   A  L   G  VV+         + V    V EI +   DA+ 
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIA 72

Query: 89  L--DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHF 144
           +  D+  +  +     +       L+I ++N+G++       ++++  +  F+ N  G F
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQF 132

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            +       + +        GRI+  SS   +                       YS SK
Sbjct: 133 FVAREAYRHLTE-------GGRIVLTSSNTSKDF--------------SVPKHSLYSGSK 171

Query: 205 -----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
                   I  + +   +       IT N+V PG   T
Sbjct: 172 GAVDSFVRIF-SKDCGDK------KITVNAVAPGGTVT 202

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 98.8 bits (247), Expect = 9e-25
 Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 34/219 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                +VTG + GIG    R+ A +G  V +     AA ++  + +V  I  +  +  A+
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVN---YAANREAADAVVAAITESGGEAVAI 81

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             D+ + A +    S  + Q  +L+ L+NNAGI+        +S + IE     N  G  
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI 141

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L     +  M +    SG  G I+NVSS    L                   +  Y+ SK
Sbjct: 142 LCAAEAVRRMSR--LYSGQGGAIVNVSSMAAILG--------------SATQYVDYAASK 185

Query: 205 LANILH----ANELARRLKEDGVDITANSVHPGAIATNI 239
            A        A E+A         I  N+V PG I T++
Sbjct: 186 AAIDTFTIGLAREVAAE------GIRVNAVRPGIIETDL 218

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 98.4 bits (246), Expect = 9e-25
 Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 31/213 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A++TGA+SGIG  TAR LA  G  V +  R      +    +  E+ +A  KV  +
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVL 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFL 145
           ELD++    V    +        L+IL+NNAGIM    +      +      TN LG   
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +T   L  + +       +G ++ +SS   R+                      Y  +K 
Sbjct: 122 MTRAALPHLLR------SKGTVVQMSSIAGRVNV------------RNAAV---YQATKF 160

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATN 238
              ++A     R +     +    + PG   T 
Sbjct: 161 G--VNAFSETLRQEVTERGVRVVVIEPGTTDTE 191

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 98.3 bits (246), Expect = 1e-24
 Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 36/214 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAIRNL--GRRVLTVKC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  MK+      G GRIIN++S                        +  Y  +K AN
Sbjct: 122 KAFVPGMKR-----NGWGRIINLTS---------------TTYWLKIEAYTHYISTKAAN 161

Query: 208 IL----HANELARRLKEDGVDITANSVHPGAIAT 237
           I      A++L +        IT N++ P  + T
Sbjct: 162 IGFTRALASDLGKD------GITVNAIAPSLVRT 189

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 98.4 bits (246), Expect = 1e-24
 Identities = 48/217 (22%), Positives = 83/217 (38%), Gaps = 35/217 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG++ G+G   A  LA  G ++V+   R   A  +  E I K     KV  ++ ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANV 63

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 149
              A ++    + +    +L++ +NNA      P M L + + +     N          
Sbjct: 64  GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQE 123

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               M+K      G G I+++SS               +        +     SK A   
Sbjct: 124 AAKLMEK-----NGGGHIVSISS---------------LGSIRYLENYTTVGVSKAALEA 163

Query: 210 ----HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                A EL+ +       I  N+V  GAI T+ ++H
Sbjct: 164 LTRYLAVELSPK------QIIVNAVSGGAIDTDALKH 194

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 98.4 bits (246), Expect = 1e-24
 Identities = 52/220 (23%), Positives = 80/220 (36%), Gaps = 35/220 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AIVTG    IG      LA  G  V++   D A      E +  E     V ++ +
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVM 69

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLL 146
           D+++  SV+N     + Q  +++IL+  AGI         ++      Q   N  G F  
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              +   M +       +G I+ + S    ++          N P       AY+ SK A
Sbjct: 130 CQAVGRIMLE-----QKQGVIVAIGS----MSGLIV------NRPQQQ---AAYNASK-A 170

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +       A E A         I AN+V P  I T + R
Sbjct: 171 GVHQYIRSLAAEWAPH------GIRANAVAPTYIETTLTR 204

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.4 bits (248), Expect = 1e-24
 Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 36/217 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMEL 89
             ++TGA+SG G  TA  LA  G  V   +RDI          +          +  +EL
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D+ S  SV     +   +  ++++LI+NAG M        + +     +  N L    + 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M++  +K    G +I +SS                     Y     Y  +K   
Sbjct: 127 RAALPHMRR--QKH---GLLIWISSSSSAGGT------------PPYLA--PYFAAK--- 164

Query: 208 ILHANE-----LARRLKEDGVDITANSVHPGAIATNI 239
              A +      AR L   G++ +   + PGA  +  
Sbjct: 165 --AAMDAIAVQYARELSRWGIETSI--IVPGAFTSGT 197

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 98.1 bits (245), Expect = 2e-24
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 36/220 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDG 61

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            DLS   +VR        Q  +++IL+NNAGI           +  +   A N    F  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK-- 204
           T   L  MKK      G GRIIN++S                +         AY  +K  
Sbjct: 122 TAAALPHMKK-----QGFGRIINIAS---------------AHGLVASANKSAYVAAKHG 161

Query: 205 ---LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                 +  A E A +       ITAN++ PG + T ++ 
Sbjct: 162 VVGFTKVT-ALETAGQ------GITANAICPGWVRTPLVE 194

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 30/209 (14%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           +  +VTGAT+G G    R    +G  V+   R     ++  + +  E+    +   +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDEL-GDNLYIAQLDV 55

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDNIELQFATNHLGHFLLTN 148
            + A++    +    +   ++IL+NNAG+ +G       S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
            +L  M +        G IIN+ S      Y  G         + Y        +K    
Sbjct: 116 AVLPGMVER-----NHGHIINIGSTAGSWPYAGG---------NVYGA------TKAF-- 153

Query: 209 LHANELARRLKEDGVDITANSVHPGAIAT 237
           +    L  R    G  +    + PG +  
Sbjct: 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 50/223 (22%), Positives = 80/223 (35%), Gaps = 44/223 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                IVTG+  GIG   A  LA  G  VV+   +  A + V     K+I +      ++
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV----AKQIVADGGTAISV 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLG 142
            +D+S   S +  A     +   ++ L+NNA I G       + +  +  +   + N  G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
               T  +   M K      G G I+N SS                   + +     Y  
Sbjct: 124 ALWCTRAVYKKMTKR-----GGGAIVNQSST------------------AAWLYSNYYGL 160

Query: 203 SKLANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
           +K+         + EL  R      +I  N++ PG I T   R
Sbjct: 161 AKVGINGLTQQLSRELGGR------NIRINAIAPGPIDTEANR 197

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 47/214 (21%), Positives = 70/214 (32%), Gaps = 37/214 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG      L   G  V +  R +A               A    +  
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPG 73

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL   A              +L+I++NNAG++        +  +  L    N    F + 
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  M        G G I+NV+S         G+R           G   Y  +K A 
Sbjct: 134 RAAIPLMAAA-----GGGAIVNVASCW-------GLR--------PGPGHALYCLTKAAL 173

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                 +       G  I  N+V P  + T ++R
Sbjct: 174 ASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLR 205

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 54/211 (25%), Positives = 78/211 (36%), Gaps = 30/211 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  AIVTG + GIG   AR L   G  V +   D+ A + V   +          A+E+
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEV 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++  ASV     +        ++L  NAG+    P + ++ +  +  F  N  G FL  
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLAN 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSE-GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            +           S  +G I+N +S                     G      YS SK A
Sbjct: 126 QIACRHF----LASNTKGVIVNTASLAAKV----------------GAPLLAHYSASKFA 165

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
                  LAR +      I  N V PG + T
Sbjct: 166 VFGWTQALAREMAPKN--IRVNCVCPGFVKT 194

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 97.6 bits (244), Expect = 3e-24
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 39/217 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++ G    +G  TA+  AL  V++V+            +    E+          
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL-KDELEDQGAKVALY 68

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             DLS+   V         +  +++I IN  G +   P +  S+   +     N+   + 
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                   +K+ A+     G II +++                   +    +  Y+ +K 
Sbjct: 129 -------FIKQAAKHMNPNGHIITIAT---------------SLLAAYTGFYSTYAGNK- 165

Query: 206 ANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
           A + H     + EL ++       I+ N++ PG + T
Sbjct: 166 APVEHYTRAASKELMKQ------QISVNAIAPGPMDT 196

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 42/238 (17%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAG 68
                  +             G  A+VTGA  GIG E A  L  RG  V++       + 
Sbjct: 8   RGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESA 67

Query: 69  KDVKETIVKEIPSAKVDAMEL--DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPF 125
           ++V    V  I     DA  +  ++  +  +     E      +L+I+ +N+G++     
Sbjct: 68  EEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHV 123

Query: 126 M-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
             ++ +  +  F  N  G F +       ++         GR+I + S   +        
Sbjct: 124 KDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQA------- 169

Query: 185 FDKINDPSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIAT 237
                          YS SK      A  + A ++A +       IT N V PG I T
Sbjct: 170 -------KAVPKHAVYSGSKGAIETFARCM-AIDMADK------KITVNVVAPGGIKT 213

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 97.3 bits (243), Expect = 3e-24
 Identities = 50/213 (23%), Positives = 78/213 (36%), Gaps = 29/213 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
              T  +TGATSG G   AR  A  G  +V+  R     ++  + +  E+    +V  + 
Sbjct: 20  MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLT 75

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM--LSKDNIELQFATNHLGHFL 145
           LD+   A++         +   L  LINNAG+  GT        D+ +    TN  G   
Sbjct: 76  LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLY 135

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            T LLL  +   A  +G    I+N+ S   +  Y              Y G      +K 
Sbjct: 136 STRLLLPRLI--AHGAGAS--IVNLGSVAGKWPYPGS---------HVYGG------TKA 176

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATN 238
              +    L  R    G  +   ++ PG   + 
Sbjct: 177 F--VEQFSLNLRCDLQGTGVRVTNLEPGLCESE 207

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 96.9 bits (242), Expect = 4e-24
 Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 50/225 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G TA+VTG+TSGIG   A+VLA  G ++V+       G       + EI     K    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVL------NGFGDPAPALAEIARHGVKAVHH 56

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             DLS +A +    +    +   ++IL+NNAGI    P      ++ +   A N    F 
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFH 116

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            T L L  M+         GRIIN++S               ++   G  G  AY  +K 
Sbjct: 117 GTRLALPGMRA-----RNWGRIINIAS---------------VHGLVGSTGKAAYVAAK- 155

Query: 206 ANILH---------ANELARRLKEDGVDITANSVHPGAIATNIIR 241
               H           E A        ++T N++ PG + T +++
Sbjct: 156 ----HGVVGLTKVVGLETATS------NVTCNAICPGWVLTPLVQ 190

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 97.2 bits (243), Expect = 4e-24
 Identities = 49/217 (22%), Positives = 78/217 (35%), Gaps = 36/217 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDL 91
            AI+TG   GIG  TA++    G  VV+       G+ V       I     +  +  D+
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV----CNNIGSPDVISFVHCDV 73

Query: 92  SSLASVRNFASEYNIQHH-QLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLL 146
           +    VRN   +  I  H +L+I+  N G++ T          ++ +     N  G FL 
Sbjct: 74  TKDEDVRN-LVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL- 131

Query: 147 TNLLLDTMKKTAR--KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
                   K  AR      +G I+  +S                   +G      Y+ +K
Sbjct: 132 ------VAKHAARVMIPAKKGSIVFTASIS-------SFT-------AGEGVSHVYTATK 171

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A +     L   L E G  I  N V P  +A+ ++ 
Sbjct: 172 HAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLT 206

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 96.6 bits (241), Expect = 6e-24
 Identities = 41/227 (18%), Positives = 79/227 (34%), Gaps = 53/227 (23%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +++G  +GIG  T +VL   G  +V        G D+++        A+V A   DLS
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIV--------GIDIRD--------AEVIA---DLS 43

Query: 93  SLASVRNFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
           +    +   ++   +    ++ L+  AG+           +    + N+ G   L +  L
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFL 98

Query: 152 DTMKKTARKSGGEGRIINVSS-------EGHRLAYHEGIRFDKINDPS------GYNGFR 198
             +KK     G +   + +SS                    ++    +         G  
Sbjct: 99  PALKK-----GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153

Query: 199 AYSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIATNIIR 241
           AY+ SK A  +     A             +  N++ PGA  T +++
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEA------GVRLNTIAPGATETPLLQ 194

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 96.5 bits (241), Expect = 7e-24
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 30/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSA--KVDA 86
           +   AIVTG   GIG   AR LA  G  + + G+ D      V    + E+     +V  
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIF 83

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT---PFM-LSKDNIELQFATNHLG 142
           +  DL+ L+S +        +  +++ L+NNAGI       F+ L  +N +     N  G
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
               T  +L  M  +  ++     IIN++S               ++          Y  
Sbjct: 144 TVFFTQAVLKAMLASDARAS--RSIINITS---------------VSAVMTSPERLDYCM 186

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           SK      +  LA RL E G  I    V PG I +
Sbjct: 187 SKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRS 219

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 96.0 bits (240), Expect = 9e-24
 Identities = 54/217 (24%), Positives = 81/217 (37%), Gaps = 39/217 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     D       +    KV+A   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           DLSS +  +   +      H +LNIL+NNAGI +       + ++  L  + N    + L
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           + L    +K         G ++ +SS               ++          Y  +K A
Sbjct: 126 SVLAHPFLKA-----SERGNVVFISS---------------VSGALAVPYEAVYGATKGA 165

Query: 207 ------NILHANELARRLKEDGVDITANSVHPGAIAT 237
                  +  A E A+       +I  N V PG IAT
Sbjct: 166 MDQLTRCL--AFEWAKD------NIRVNGVGPGVIAT 194

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 96.0 bits (240), Expect = 9e-24
 Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 35/217 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTG+  G+G   A  LA  G  V++         +  +T+ ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   ++    S+ + +   ++ILINNAGI    P + L  +N +    TN    FL++
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 M          G+IIN+ S               +   +       Y+ +K   
Sbjct: 126 RSAAKRMI----ARNSGGKIINIGS---------------LTSQAARPTVAPYTAAK-GG 165

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIATNI 239
           I       A E A+       +I  N++ PG I T++
Sbjct: 166 IKMLTCSMAAEWAQF------NIQTNAIGPGYILTDM 196

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 96.2 bits (240), Expect = 1e-23
 Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 44/230 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
               A++TG    IG   A  L  +G  VV+       A + +   +     +      +
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL-NAARAGSAVLCK 68

Query: 89  LDLSSLASVRNFAS---EYNIQHH-QLNILINNAGIMG-TPFMLSKDNIEL--------- 134
            DLS  +S+ +      + + +   + ++L+NNA     TP +   D             
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 135 ---QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP 191
               F +N +    L         +          ++N+                     
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD---------------AMTD 173

Query: 192 SGYNGFRAYSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIAT 237
               GF  Y+ +K A        A ELA R       I  N+V PG    
Sbjct: 174 LPLPGFCVYTMAKHALGGLTRAAALELAPR------HIRVNAVAPGLSLL 217

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 51/220 (23%), Positives = 77/220 (35%), Gaps = 40/220 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +  T +V GA   IG   A   A  G +VV  +    A +      V EI        A+
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVV--LTYNGAAEGAATA-VAEIEKLGRSALAI 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
           + DL++ A V    S    +  +++ L++ AG +        + +         N    F
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           L     L  M K        G I+  SS+  R                G  G  AY+ SK
Sbjct: 124 LTAKTALPKMAKG-------GAIVTFSSQAGRDG--------------GGPGALAYATSK 162

Query: 205 LANIL----HANELARRLKEDGVDITANSVHPGAIATNII 240
            A +      A E+  +       I  N+V PG I+T   
Sbjct: 163 GAVMTFTRGLAKEVGPK-------IRVNAVCPGMISTTFH 195

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 41/243 (16%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGL----TAIVTGAT-SGIGTETARVLALRGVHVVMGVRD 64
           GP   + S   +E+    DG GL      +VT A  +GIG+ TAR   L G  VV+    
Sbjct: 1   GPGSMNLSEAPKEI----DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56

Query: 65  IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-T 123
                + ++ +  ++   +V+A+  D++S  +V    ++   +  +L++L+NNAG+ G T
Sbjct: 57  ERRLGETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT 115

Query: 124 PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           P + ++ +  +             T   L       R     G I+N +S          
Sbjct: 116 PVVDMTDEEWDRVLNVTLTSVMRATRAALRYF----RGVDHGGVIVNNAS---------- 161

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANIL----HANELARRLKEDGVDITANSVHPGAIATN 238
                +      +    Y+ +K   +      A E           +  N+V P      
Sbjct: 162 -----VLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEF------GVRINAVSPSIARHK 210

Query: 239 IIR 241
            + 
Sbjct: 211 FLE 213

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 96.2 bits (240), Expect = 1e-23
 Identities = 48/240 (20%), Positives = 79/240 (32%), Gaps = 41/240 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-----------KDVKETIVKEIPS 81
             +VTG   G G   A  LA  G  ++  + DI              +D++E    E+  
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADII--LFDICHDIETNEYPLATSRDLEEA-GLEVEK 68

Query: 82  A--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN 139
              K    E+D+   A+V    +    +  +L++++ NAGI      L        F  +
Sbjct: 69  TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVD 128

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFR 198
            +G          T+            II   S  G                     G  
Sbjct: 129 FVGVIN-------TVHAALPYLTSGASIITTGSVAGLI-----AAAQPPGAGGPQGPGGA 176

Query: 199 AYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTIL 253
            YS +K         L A +LA +       I AN +HP  + T+++    ++R     L
Sbjct: 177 GYSYAKQLVDSYTLQL-AAQLAPQ------SIRANVIHPTNVNTDMLNSAPMYRQFRPDL 229

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 95.3 bits (238), Expect = 2e-23
 Identities = 52/211 (24%), Positives = 73/211 (34%), Gaps = 27/211 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T +VTG T GIG       A  G  +    R+     +      K+    +V     
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 70

Query: 90  DLSSLASVRNFASEYNIQH-HQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           D S            +     +L+ILINN G     P +  + ++     +TN    + L
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           + L    +K       G G II +SS               I      +    YS +K A
Sbjct: 131 SQLAHPLLKA-----SGCGNIIFMSS---------------IAGVVSASVGSIYSATKGA 170

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIAT 237
               A  LA     DG  I AN+V P  IAT
Sbjct: 171 LNQLARNLACEWASDG--IRANAVAPAVIAT 199

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 55/215 (25%), Positives = 77/215 (35%), Gaps = 34/215 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              TA VTG +SGIG   AR LA RG+ V    RD        + +        VD    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSC 80

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++S   V    +    +   + IL+N+AG  G      L          TN  G F +T
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +L             GRI+N++S                    G      Y+ SK   
Sbjct: 141 REVLRAGGMREAGW---GRIVNIAS---------------TGGKQGVMYAAPYTASK-HG 181

Query: 208 IL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           ++        ELA+        IT N+V PG + T
Sbjct: 182 VVGFTKSVGFELAKT------GITVNAVCPGYVET 210

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 54/217 (24%), Positives = 81/217 (37%), Gaps = 38/217 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G + +VTG T GIG   A V A  G +V +  R  A        + +     KV  ++ 
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQT 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFL 145
           D+S  A     A     +   ++++  NAG+   P       + + +   FA N  G F 
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGV--FPDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
                LD +   +      GR++  SS                   +GY G+  Y  +K 
Sbjct: 126 AVQACLDALIA-SGS----GRVVLTSS--------------ITGPITGYPGWSHYGATK- 165

Query: 206 ANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           A  L      A ELA         IT N++ PG I T
Sbjct: 166 AAQLGFMRTAAIELAPH------KITVNAIMPGNIMT 196

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 94.6 bits (236), Expect = 6e-23
 Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 40/240 (16%)

Query: 9   KGPSGFSASSTAEEVTDGI--DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
           +GP       +AE     +  D S  + +VTG T GIG   A V A  G +V +  R   
Sbjct: 17  QGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
               V   +  E+ +  V  + LD+S   S  + A         L+++  NAGI   P  
Sbjct: 77  ELSSVTAEL-GELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI--FPEA 133

Query: 127 L----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
                + + +      N  G        L  +   + +    GR+I  SS          
Sbjct: 134 RLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGR----GRVILTSS---------- 178

Query: 183 IRFDKINDPSGYNGFRAYSQSKLANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
                    +GY G+  Y  SK A  L      A ELA R       +T N++ PG I T
Sbjct: 179 ----ITGPVTGYPGWSHYGASK-AAQLGFMRTAAIELAPR------GVTVNAILPGNILT 227

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 94.2 bits (235), Expect = 6e-23
 Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 34/215 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTGATSGIG E AR L   G+ V +  R     +   + + +     + D    
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTC 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ S+  +    +    ++  +++L+NNAG   G     L+ +       TN  G F +T
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 138

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +L       R +   GRI+N++S                    G      YS SK   
Sbjct: 139 KQVLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASK-HG 179

Query: 208 IL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           ++        ELAR        IT N+V PG + T
Sbjct: 180 VVGFTKALGLELART------GITVNAVCPGFVET 208

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 93.8 bits (234), Expect = 8e-23
 Identities = 59/221 (26%), Positives = 85/221 (38%), Gaps = 35/221 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TGA++GIG + A   A  G  V +  R   A + V + I       K   +  
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRC 88

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++    VR    +   +   ++I + NAGI      + +  +  +    TN  G FL  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                 M       G  G II  +S  GH            IN P   +    Y  SK A
Sbjct: 149 QAAARAM----VDQGLGGTIITTASMSGHI-----------INIPQQVS---HYCTSK-A 189

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            ++H     A ELA         I  NSV PG I T ++  
Sbjct: 190 AVVHLTKAMAVELAPH------QIRVNSVSPGYIRTELVEP 224

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 56/248 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G  A +TGA  G G   A  LA  G  ++    D+               D+ ET V++
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADII--AIDVCKQLDGVKLPMSTPDDLAET-VRQ 83

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIE 133
           + +   ++ A ++D+    +++    +   Q  +L+I++ NA +   GT    +      
Sbjct: 84  VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWR 143

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKIND 190
                N  G ++       T +            G I+  SS G       G+R      
Sbjct: 144 DMIDVNLNGAWI-------TARVAIPHIMAGKRGGSIVFTSSIG-------GLR------ 183

Query: 191 PSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
             G      Y  SK     L   + A EL  R      +I  N V P ++AT ++ +   
Sbjct: 184 --GAENIGNYIASKHGLHGLMRTM-ALELGPR------NIRVNIVCPSSVATPMLLNEPT 234

Query: 246 FRSMNTIL 253
           +R     L
Sbjct: 235 YRMFRPDL 242

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 93.9 bits (234), Expect = 1e-22
 Identities = 45/218 (20%), Positives = 75/218 (34%), Gaps = 38/218 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
            G  AIVTG  +GIG    + L   G +VV+  R +   K   + +   +P     +V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHF 144
           ++ ++ +   V N          ++N L+NN G    +P   +S         TN  G F
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            +   +  +  K        G I+N+                      G+        ++
Sbjct: 137 YMCKAVYSSWMK-----EHGGSIVNIIVPTKA----------------GFPLAVHSGAAR 175

Query: 205 LANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            A + +     A E A         I  N V PG I +
Sbjct: 176 -AGVYNLTKSLALEWACS------GIRINCVAPGVIYS 206

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 37/216 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTGA SGIG E  R  A  G  +++  R+ AA         +E+ +A    +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAVAARIVA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   ++   A+E       ++IL+N+AGI      +           A N  G F  +
Sbjct: 66  DVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWAS 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 M        G G I+N+ S    ++     R              +Y  SK   
Sbjct: 125 RAFGRAMVAR-----GAGAIVNLGS----MSGTIVNRPQFA---------SSYMASK-GA 165

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIATN 238
           +       A E A R       +  N++ PG +AT 
Sbjct: 166 VHQLTRALAAEWAGR------GVRVNALAPGYVATE 195

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 51/218 (23%), Positives = 81/218 (37%), Gaps = 29/218 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T IVTG   GIG    R +A  G +V +  R  A   +V E + KE    K  A + 
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQC 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S+   V     + +     ++ LI NAG+ +  P   L+ ++    +  N  G F   
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
             +     +  +K    G I+  SS     +              +G      Y+ SK A
Sbjct: 132 RAVAKLWLQKQQK----GSIVVTSSMSSQIINQSS---------LNGSLTQVFYNSSK-A 177

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIATNI 239
              +     A E A         I  N++ PG + T+ 
Sbjct: 178 ACSNLVKGLAAEWASA------GIRVNALSPGYVNTDQ 209

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 35/215 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V G    +G+   +    R   V     D+   ++   +++ ++  +  +  + 
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQ 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLL 146
             + +  +            +++ ++  AG    G         N +L +  +     + 
Sbjct: 64  VTAEVGKLLGDQ--------KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           ++L    +K+        G +    +                    G  G   Y  +K A
Sbjct: 116 SHLATKHLKEG-------GLLTLAGA---------------KAALDGTPGMIGYGMAKGA 153

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  LA +         A +V P  + T + R
Sbjct: 154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 47/217 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA+ GIG    R    R   VV   R I    D             +  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAG 75

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   +      E   +  +++ L+NNAG+    PF+ +++++ +     N  G F +T
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHIT 135

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR--AYSQSKL 205
                 M K      G G I+++++                       G      S +K 
Sbjct: 136 QRAAAEMLKQ-----GSGHIVSITT---------------SLVDQPMVGMPSALASLTK- 174

Query: 206 ANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
             +       A E +R        +  N+V PG I T
Sbjct: 175 GGLNAVTRSLAMEFSRS------GVRVNAVSPGVIKT 205

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 91.8 bits (229), Expect = 2e-22
 Identities = 31/215 (14%), Positives = 55/215 (25%), Gaps = 45/215 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VT A    G      L   G  VV      A      E    E  +    A+     
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA---AERQRFESENPGTIAL----- 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----SKDNIELQFATNHLGHFLLT 147
           +                 ++ +++N  I      L     S+ +I   F    +   LL 
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  ++       G   +I ++S                           Y  ++ A 
Sbjct: 115 QSAIAPLRA-----AGGASVIFITS---------------SVGKKPLAYNPLYGPAR-AA 153

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            +      A  L+R        I   ++ P     
Sbjct: 154 TVALVESAAKTLSRD------GILLYAIGPNFFNN 182

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 92.3 bits (230), Expect = 3e-22
 Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 30/221 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G +AIV+G   G+G  T R L   G+ VV+       GK +      E+   + + +  
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL----ADEL-GNRAEFVST 83

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QF----ATNHLG 142
           +++S  SV       N        ++ + G      ++ +D        F         G
Sbjct: 84  NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
            + +  L+  ++     +  GE G ++  +S    +A +EG             G  AY+
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTAS----IAGYEGQ-----------IGQTAYA 188

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +K   I      AR L   G  I  N++ PG + T I+  
Sbjct: 189 AAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMES 227

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 91.8 bits (229), Expect = 3e-22
 Identities = 45/216 (20%), Positives = 75/216 (34%), Gaps = 34/216 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRC 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S+   V+        +  +L+ ++N AGI    P      D        N  G + + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                 +++          IIN+ S    L   E                 AY+ SK   
Sbjct: 139 REAFSLLRE-----SDNPSIINIGS----LTVEEV----------TMPNISAYAASK-GG 178

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIATN 238
           +       A E  R        I  N + PG   T 
Sbjct: 179 VASLTKALAKEWGRY------GIRVNVIAPGWYRTK 208

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 90.8 bits (226), Expect = 6e-22
 Identities = 30/215 (13%), Positives = 58/215 (26%), Gaps = 35/215 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IV G    +G+         G  V+    D++A       I+ +      +  + 
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQS 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLL 146
            L   AS    +        Q++ +   AG    G+        N +L    +     + 
Sbjct: 60  ILEQTASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
             L    +K         G +    +                           Y  +K A
Sbjct: 112 AKLATTHLKPG-------GLLQLTGA---------------AAAMGPTPSMIGYGMAKAA 149

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                + LA +      +    ++ P  + T + R
Sbjct: 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 184

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 91.1 bits (227), Expect = 8e-22
 Identities = 53/249 (21%), Positives = 87/249 (34%), Gaps = 58/249 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVK 77
            G  A +TGA  G G   A  +A  G  ++    DIA               D+ ET V+
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADII--AVDIAGKLPSCVPYDPASPDDLSET-VR 66

Query: 78  EIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIE 133
            + +A  ++ A  +D      +R    +      +L+I++ NAG+        ++ ++  
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR 126

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS-EGHRLAYHEGIRFDKIN 189
                N  G +        T+   A    + G  G II +SS  G +             
Sbjct: 127 DVMDINVTGTWN-------TVMAGAPRIIEGGRGGSIILISSAAGMK------------- 166

Query: 190 DPSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
                     Y+ SK     LA    A EL +        I  NSVHPG + T +   + 
Sbjct: 167 ---MQPFMIHYTASKHAVTGLARAF-AAELGKH------SIRVNSVHPGPVNTPMGSGDM 216

Query: 245 LFRSMNTIL 253
           +      + 
Sbjct: 217 VTAVGQAME 225

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 54/252 (21%), Positives = 78/252 (30%), Gaps = 44/252 (17%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAG 68
           G S      ++  V  G       A+VTGA   IG   A  L   G  VV+       A 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61

Query: 69  KDVKETIVKEIPSAKVDAMELDLSS----LASVRNFASEYNIQHHQLNILINNAGIM-GT 123
             + + + KE         + DL++     AS     +       + ++L+NNA     T
Sbjct: 62  VSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT 120

Query: 124 PF--MLSKDNIELQ---------FATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVS 171
           P      +DN   +           TN +  FLLT       K T    +     I+N+ 
Sbjct: 121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180

Query: 172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL----HANELARRLKEDGVDITA 227
                                    F  Y+  K A +      A ELA         I  
Sbjct: 181 D---------------AMVDQPCMAFSLYNMGKHALVGLTQSAALELAPY------GIRV 219

Query: 228 NSVHPGAIATNI 239
           N V PG     +
Sbjct: 220 NGVAPGVSLLPV 231

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 34/215 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                I+TG +SG+G   A   A  G  VV+  R     ++ K  I +     ++  +++
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQM 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ +   ++    + + +  +++ILINNA      P   LS +           G F  +
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             +     +   K    G IIN+ +                       G    + +K A 
Sbjct: 123 QAIGKYWIEKGIK----GNIINMVA---------------TYAWDAGPGVIHSAAAK-AG 162

Query: 208 ILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
           +L      A E  R+       I  N++ PG I  
Sbjct: 163 VLAMTKTLAVEWGRKY-----GIRVNAIAPGPIER 192

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 56/246 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVK 77
            G  A +TGA  G G   A  LA  G  ++    DI A              D+ ET  +
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADII--ACDICAPVSASVTYAPASPEDLDET-AR 70

Query: 78  EIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIE 133
            +     K     LD+   A++R   ++   Q  +L++++ NAG+   G  + L+ +  +
Sbjct: 71  LVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWD 130

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKIND 190
                N  G +        T++ T     ++G  G I+ VSS         G++      
Sbjct: 131 TVIGVNLTGTWR-------TLRATVPAMIEAGNGGSIVVVSSSA-------GLK------ 170

Query: 191 PSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
                G   YS SK     L N L A EL          I  NS+HP ++ T +I   ++
Sbjct: 171 --ATPGNGHYSASKHGLTALTNTL-AIELGEY------GIRVNSIHPYSVETPMIEPEAM 221

Query: 246 FRSMNT 251
                 
Sbjct: 222 MEIFAR 227

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 52/216 (24%), Positives = 72/216 (33%), Gaps = 48/216 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG    VTGA  GIG  TA      G  V    +                         +
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATEVM 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  A V         +  +L+ L+N AGI  MG    LSK++ +  FA N  G F L 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
              ++  ++        G I+ V+S   H                    G  AY  SK A
Sbjct: 114 QQTMNQFRRQ-----RGGAIVTVASDAAHT----------------PRIGMSAYGASK-A 151

Query: 207 NILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            +         ELA         +  N V PG+  T
Sbjct: 152 ALKSLALSVGLELAGS------GVRCNVVSPGSTDT 181

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 31/221 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                IVTGA+SG+G    R+LA  G  V+       AG++       E+  A V     
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP----AAEL-GAAVRFRNA 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD---NIELQFA----TNHLG 142
           D+++ A      +    +   ++ L+N AG      +L +     ++  FA     N +G
Sbjct: 61  DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD-SFARTVAVNLIG 119

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
            F +  L  + M +    + GE G I+N +S    +A  +G             G  AY+
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTAS----IAAFDGQI-----------GQAAYA 164

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            SK          AR L   G  I   ++ PG   T ++  
Sbjct: 165 ASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAG 203

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTGA+SG G   A      G  V+   R   A  D+           + +A+ LD++
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVT 61

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
               +   A++   ++ ++++L+NNAG   +G     ++  +   F  +  G   LT  L
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           L  M+   R S   G ++N+SS G +L                + GF AYS +K      
Sbjct: 122 LPQMR--ERGS---GSVVNISSFGGQL---------------SFAGFSAYSATK-----A 156

Query: 211 ANE-----LARRLKEDGVDITANSVHPGAIATNIIRHNSLFRS 248
           A E     LA  +   G+ +    V PGA  TN+    + + S
Sbjct: 157 ALEQLSEGLADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYFS 197

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 49/214 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V  A+ GIG   A VL+  G  V +  R+    K      V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
                  +R        +  +++IL+ NAG      F  L+ ++ +    +  L    + 
Sbjct: 66  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA----YSQS 203
              L  MK+  +     GRI+ ++S     +    I  +        N  R     + ++
Sbjct: 121 RNYLPAMKE--KGW---GRIVAITS----FSVISPIE-NLYT----SNSARMALTGFLKT 166

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGAIAT 237
                  + E+A         IT N V PG   T
Sbjct: 167 L------SFEVAPY------GITVNCVAPGWTET 188

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 54/234 (23%), Positives = 84/234 (35%), Gaps = 51/234 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
           +G  A +TGA  G G   A  LA  G  ++    D+               ++  T VK 
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADII--AVDLCDQIASVPYPLATPEELAAT-VKL 68

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
           +     ++ A + D+    S+         +  +L+I++ NAGI   P     D      
Sbjct: 69  VEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI--APMSAGDDGWHDVI 126

Query: 137 ATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             N  G +        T+K       K G  G I+ +SS         G+      DP  
Sbjct: 127 DVNLTGVYH-------TIKVAIPTLVKQGTGGSIVLISSSA-------GLAGVGSADP-- 170

Query: 194 YNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             G   Y  +K     L  +  AN LA +       I  NS+HP  + T +I +
Sbjct: 171 --GSVGYVAAKHGVVGLMRVY-ANLLAGQ------MIRVNSIHPSGVETPMINN 215

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 55/252 (21%), Positives = 84/252 (33%), Gaps = 60/252 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK---------------DVKET 74
            G  A VTGA  G G   A  LA  G  ++    DI                   D+ ET
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQEGADII--AVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 75  IVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSK 129
               +     ++   E+D+    +++        Q  +L+I++ NAGI   G      S+
Sbjct: 68  -ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126

Query: 130 DNIELQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEGIRFD 186
           ++       N  G +        T+K         G  G II  SS G       G++  
Sbjct: 127 EDWTEMIDINLAGVWK-------TVKAGVPHMIAGGRGGSIILTSSVG-------GLK-- 170

Query: 187 KINDPSGYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  Y     Y  +K     L       EL +        I  NSVHP  + T ++ 
Sbjct: 171 ------AYPHTGHYVAAKHGVVGLMRAF-GVELGQH------MIRVNSVHPTHVKTPMLH 217

Query: 242 HNSLFRSMNTIL 253
           +   F+     L
Sbjct: 218 NEGTFKMFRPDL 229

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 89.6 bits (223), Expect = 3e-21
 Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 34/232 (14%)

Query: 15  SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET 74
           ++ +  +++  G        ++TGA+SGIG   AR  +  G  +++  R +         
Sbjct: 2   ASMTGGQQMGRGSMKK--LVVITGASSGIGEAIARRFSEEGHPLLLLARRVER------- 52

Query: 75  IVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNI 132
            +K +        ++D++   +     +     +   + ++NNAG+M          +  
Sbjct: 53  -LKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEW 111

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
           +  F  N LG       +L  MK  AR     G IIN+SS   +  +             
Sbjct: 112 QRMFDVNVLGLLNGMQAVLAPMK--ARNC---GTIINISSIAGKKTF------------P 154

Query: 193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
            +     Y  +K A  +HA     R +    ++   ++ P A+ T ++ H +
Sbjct: 155 DHAA---YCGTKFA--VHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT 201

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 89.1 bits (222), Expect = 4e-21
 Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 40/214 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T +VTGA SGIG     + A  G  +V   R+     +    +      A+  A+  
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   +V    +E   +  +L+ + + AG+        L  +  E     N  G FL+ 
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
               + +++        G ++   S         G+         G  G   Y+  KL  
Sbjct: 120 RKAGEVLEEG-------GSLVLTGSVA-------GL---------GAFGLAHYAAGKLGV 156

Query: 208 IL----HANELARRLKEDGVDITANSVHPGAIAT 237
           +      A ELAR+       +  N + PG I T
Sbjct: 157 VGLARTLALELARK------GVRVNVLLPGLIQT 184

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 88.8 bits (221), Expect = 4e-21
 Identities = 40/213 (18%), Positives = 68/213 (31%), Gaps = 43/213 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TAIVT      G  +A  L+  G  V           D       E+ +      +L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVA--------CHDESFKQKDELEAFAETYPQLKPM 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S              + Q+++L++N        P    + ++         +  F L N 
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK----- 204
           +   MKK  RKS   G II ++S                     +     Y+ ++     
Sbjct: 115 VASQMKK--RKS---GHIIFITS---------------ATPFGPWKELSTYTSARAGACT 154

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIAT 237
           LAN L + EL         +I   ++ P  + +
Sbjct: 155 LANAL-SKELGEY------NIPVFAIGPNYLHS 180

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 88.4 bits (220), Expect = 7e-21
 Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           S   A VTG   GIGT   + L   G  VV G          +   +++  +      A 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC---GPNSPRRVKWLEDQKALGFDFYAS 68

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           E ++    S +    +   +  ++++L+NNAGI       ++D +        +     T
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI-------TRDVVFRKMTREDWQAVIDT 121

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           N    F +T  ++D M +        GRIIN+SS               +N   G  G  
Sbjct: 122 NLTSLFNVTKQVIDGMVE-RGW----GRIINISS---------------VNGQKGQFGQT 161

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            YS +K A I       A E+A +       +T N+V PG I T
Sbjct: 162 NYSTAK-AGIHGFTMSLAQEVATK------GVTVNTVSPGYIGT 198

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 88.5 bits (220), Expect = 8e-21
 Identities = 40/218 (18%), Positives = 74/218 (33%), Gaps = 41/218 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A +TG  SGIG   A +    G H V+  R +         +       +   + +
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSM 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ +  +V     +   +  +++ILIN A      P   LS +  +     +  G F ++
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 144

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSK 204
            +L +   +        G I+N+++                    G  G         +K
Sbjct: 145 RVLYEKFFR-----DHGGVIVNITA------------------TLGNRGQALQVHAGSAK 181

Query: 205 LANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            A +       A E   +      +I  NS+ PG I+ 
Sbjct: 182 -AAVDAMTRHLAVEWGPQ------NIRVNSLAPGPISG 212

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 31/217 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            GL A++TG  SG+G  TA  L  +G   V+     + G+       K++          
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ----AKKL-GNNCVFAPA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--------MGTPFMLSKDNIELQFATNHL 141
           D++S   V+   +    +  ++++ +N AGI        +      + ++ +     N +
Sbjct: 66  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125

Query: 142 GHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
           G F +  L+   M +     GG+ G IIN +S    +A  EG             G  AY
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS----VAAFEGQV-----------GQAAY 170

Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           S SK   +     +AR L   G  I   ++ PG   T
Sbjct: 171 SASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGT 205

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 44/218 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I       K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   SV+   +E       ++IL+NNA I+    +  +  D+       N  G F++T
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSK 204
               D M+   +     GR+I+++S                   + + G     AY  +K
Sbjct: 120 RAGTDQMRAAGKA----GRVISIASN------------------TFFAGTPNMAAYVAAK 157

Query: 205 LANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
              ++      A EL +       +ITAN+V PG I +
Sbjct: 158 -GGVIGFTRALATELGKY------NITANAVTPGLIES 188

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   A VTG   G+G   +R L   G+ V +     +   D   T +     A     A 
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSH---SERNDHVSTWLMHERDAGRDFKAY 80

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
            +D++   S    A +      ++++LINNAGI       ++D       +  +     T
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI-------TRDATFMKMTKGDWDAVMRT 133

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           +    F +T   +  M +  R     GRI+N+ S               +N   G  G  
Sbjct: 134 DLDAMFNVTKQFIAGMVE-RRF----GRIVNIGS---------------VNGSRGAFGQA 173

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            Y+ +K A I       A E A+R       IT N+V PG +AT
Sbjct: 174 NYASAK-AGIHGFTKTLALETAKR------GITVNTVSPGYLAT 210

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 40/218 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A +TG  +G+G     +L+  G   V+  R +   K   E I  +    KV A++ 
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 83

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+     V+N  SE        NI+INNA     +P   LS +  +        G   +T
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR---AYSQSK 204
             +   +     K+      +++++                       G       + +K
Sbjct: 144 LEIGKQL----IKAQKGAAFLSITT------------------IYAETGSGFVVPSASAK 181

Query: 205 LANILH-----ANELARRLKEDGVDITANSVHPGAIAT 237
            A +       A E  +        +  N + PG I T
Sbjct: 182 -AGVEAMSKSLAAEWGKY------GMRFNVIQPGPIKT 212

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 87.3 bits (217), Expect = 3e-20
 Identities = 63/244 (25%), Positives = 99/244 (40%), Gaps = 49/244 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G  A +TGA  G G   A  LA  G  +V    D+   +           ++KET V+ 
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIV--AIDLCRQQPNLDYAQGSPEELKET-VRL 101

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIEL 134
           +     ++ A + D+  LAS++    E   +   ++IL++N GI   G    L+      
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD 161

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY 194
              TN +G +     +L +M +  +     G +I VSS         G+R        G 
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQG----GSVIFVSSTV-------GLR--------GA 202

Query: 195 NGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSM 249
            G   Y+ SK     L   L ANE+ R       +I  NSV+PGA+ T +  +  L +  
Sbjct: 203 PGQSHYAASKHGVQGLMLSL-ANEVGRH------NIRVNSVNPGAVNTEMALNEKLLKMF 255

Query: 250 NTIL 253
              L
Sbjct: 256 LPHL 259

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 52/212 (24%), Positives = 76/212 (35%), Gaps = 31/212 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
              A+VTG  SGIG   A   A  G  V +     A  +D ++     I     K   + 
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLP-AEEEDAQQV-KALIEECGRKAVLLP 106

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFL 145
            DLS  +  R+   +       L+IL   AG          L+ +  +  FA N    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +T   +  + K     G    II  SS               I           Y+ +K 
Sbjct: 167 ITQEAIPLLPK-----G--ASIITTSS---------------IQAYQPSPHLLDYAATKA 204

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
           A + ++  LA+++ E G  I  N V PG I T
Sbjct: 205 AILNYSRGLAKQVAEKG--IRVNIVAPGPIWT 234

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 86.5 bits (215), Expect = 4e-20
 Identities = 58/228 (25%), Positives = 83/228 (36%), Gaps = 53/228 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-----VKEIPSAKV 84
               A+VTGA SGIG   +  LA  G  V     D AA ++    +      +  P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 85  DAMELDLSSLASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF-- 136
            A + D+S   + R    +         +++++ AGI       ++D       E  +  
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDDWDK 118

Query: 137 --ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY 194
             A N  G FL+T      +     +    G IIN+SS               I    G 
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCR----GSIINISS---------------IVGKVGN 159

Query: 195 NGFRAYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            G   Y+ SK A ++      A EL R        I  NSV PG IAT
Sbjct: 160 VGQTNYAASK-AGVIGLTQTAARELGRH------GIRCNSVLPGFIAT 200

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.7 bits (213), Expect = 5e-20
 Identities = 36/224 (16%), Positives = 60/224 (26%), Gaps = 47/224 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
              +TG+ SGIG     +LA  G  V+           D+        P  +  A+   L
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLST------PGGRETAVAAVL 56

Query: 92  SSLAS-----VRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLG 142
                     V          +  L + +N  G+     G    LS+           + 
Sbjct: 57  DRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIA 116

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
                   L  ++         G          +                      AY+ 
Sbjct: 117 ATQPGAAELPMVEA-----MLAGDEARAIELAEQQG----------------QTHLAYAG 155

Query: 203 SKLANIL----HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           SK A       +  + A R       +  N V PGA+ T +++ 
Sbjct: 156 SKYAVTCLARRNVVDWAGR------GVRLNVVAPGAVETPLLQA 193

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 85.7 bits (213), Expect = 7e-20
 Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 42/231 (18%)

Query: 17  SSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV 76
           +   + +T     +G TA+VTGA SGIG   A   A  G HV+   R         + + 
Sbjct: 17  NLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-----KEVA 71

Query: 77  KEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNI 132
            EI       +A+  DL+ L    N A E      ++++L+NNAGI    P   +S    
Sbjct: 72  DEIADGGGSAEAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRW 130

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDP 191
                 N    ++L+      M        G GRI+ ++S    +               
Sbjct: 131 REVLTVNLDAAWVLSRSFGTAMLA-----HGSGRIVTIASMLSFQ--------------- 170

Query: 192 SGYNGFRAYSQSK--LANI--LHANELARRLKEDGVDITANSVHPGAIATN 238
            G     AY+ SK  +  +    A+E A R       +  N++ PG + T 
Sbjct: 171 -GGRNVAAYAASKHAVVGLTRALASEWAGR------GVGVNALAPGYVVTA 214

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 39/222 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTG++ GIG   A   A  G  V +      A +  +             A + 
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKC 90

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIEL---QFATNHLGHFL 145
           ++S   SV    S+       +++ + NAG+       +  DN +      + +  G + 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            ++ +    KK      G+G +I  SS  G             +N P        Y+ +K
Sbjct: 151 CSHNIGKIFKKN-----GKGSLIITSSISGKI-----------VNIPQLQA---PYNTAK 191

Query: 205 LANILH-----ANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A   H     A E A            N++ PG I T+I  
Sbjct: 192 -AACTHLAKSLAIEWAPF-------ARVNTISPGYIDTDITD 225

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 83.5 bits (207), Expect = 1e-19
 Identities = 27/230 (11%), Positives = 72/230 (31%), Gaps = 61/230 (26%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + +  ++ GA+  +G+     L  +   V+       AG+                 + +
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVI------TAGR-------------HSGDVTV 41

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++++ S++    +      +++ +++  G    +P   L+ +   +  ++   G   L 
Sbjct: 42  DITNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK--- 204
            L +D++         +G     +                I          + + +    
Sbjct: 98  LLGIDSLND-------KGSFTLTTG---------------IMMEDPIVQGASAAMANGAV 135

Query: 205 --LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTI 252
              A    A E+ R        I  N+V P  +  +  +    F     +
Sbjct: 136 TAFAKSA-AIEMPRG-------IRINTVSPNVLEESWDKLEPFFEGFLPV 177

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 86.6 bits (215), Expect = 2e-19
 Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 44/218 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG   A V A  G  VV             E + +        A+ L
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRVADKVGGTALTL 266

Query: 90  DLSSLASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATN 139
           D+++  +V    +     H  +++IL+NNAGI  T     +D +     E ++    A N
Sbjct: 267 DVTADDAVDKITAHVTEHHGGKVDILVNNAGI--T-----RDKLLANMDEKRWDAVIAVN 319

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
            L    LT  L+             GR+I +SS               +   +G  G   
Sbjct: 320 LLAPQRLTEGLVGNGTI-GEG----GRVIGLSS---------------MAGIAGNRGQTN 359

Query: 200 YSQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           Y+ +K   I  A  LA  L + G  IT N+V PG I T
Sbjct: 360 YATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIET 395

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 85.1 bits (211), Expect = 2e-19
 Identities = 44/250 (17%), Positives = 74/250 (29%), Gaps = 67/250 (26%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
           +   A+VTGA   +G   A  L   G  V +     AA       +   + +        
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSATLNARRPNSAIT 64

Query: 87  MELDLSSLASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLS 128
           ++ DLS++A+     ++ +                     + ++L+NNA     TP + +
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 129 KD---------------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
            +                    F +N +  + L       +  T  K  G    IIN+  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 173 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI-----LHANELARRLKEDGVDITA 227
                                  G+  Y+ +K A         A ELA         I  
Sbjct: 185 ---------------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRV 222

Query: 228 NSVHPGAIAT 237
           N V PG    
Sbjct: 223 NGVGPGLSVL 232

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA+ GIG   A  LA +G +VV+     A  +     +V EI        A+
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNY---AGNEQKANEVVDEIKKLGSDAIAV 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
             D+++   V N   +      Q++IL+NNAG+       +KDN+     E ++     T
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRMKEEEWDTVINT 112

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           N  G FL T  +   M +  R     GRI+N++S               +   +G  G  
Sbjct: 113 NLKGVFLCTKAVSRFMMR-QRH----GRIVNIAS---------------VVGVTGNPGQA 152

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            Y  +K A ++      A ELA R      +IT N++ PG IAT
Sbjct: 153 NYVAAK-AGVIGLTKTSAKELASR------NITVNAIAPGFIAT 189

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 83.7 bits (208), Expect = 2e-19
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 52/226 (23%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +  +   A+VTGA+ GIG E A  LA +G  VV      A+ +  + ++ ++    K   
Sbjct: 1   MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARG 58

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
           + L++S + S++NF +E   ++  ++IL+NNAGI       ++DN+ ++           
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLMMRMSEDEWQSVIN 111

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNG 196
           TN    F ++   +  M K  R     GRII++ S  G                 +G  G
Sbjct: 112 TNLSSIFRMSKECVRGMMK-KRW----GRIISIGSVVGS----------------AGNPG 150

Query: 197 FRAYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
              Y  +K A ++      A E+A R      +IT N V PG IAT
Sbjct: 151 QTNYCAAK-AGVIGFSKSLAYEVASR------NITVNVVAPGFIAT 189

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 83.3 bits (207), Expect = 3e-19
 Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
              +A+VTGA+ GIG   A  LA  G +V +     A  K+  E +V+EI +      A+
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNY---AGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + +++    V+    E   Q   L++L+NNAGI       ++DN+     E ++     T
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDT 112

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           N  G F         M +  R     G IIN+SS               +    G  G  
Sbjct: 113 NLKGVFNCIQKATPQMLR-QRS----GAIINLSS---------------VVGAVGNPGQA 152

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            Y  +K A ++      A ELA R       IT N+V PG I +
Sbjct: 153 NYVATK-AGVIGLTKSAARELASR------GITVNAVAPGFIVS 189

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 83.3 bits (207), Expect = 3e-19
 Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G TAIVTG++ G+G   A  L   G ++V+     +      +   +E  +A   V   
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS---LDATAEEFKAAGINVVVA 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + D+ +   V N          +++IL+NNAGI       ++D +     E  +     T
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI-------TRDTLMLKMSEKDWDDVLNT 113

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           N    +L T  +   M K  +     G+IIN++S               I    G  G  
Sbjct: 114 NLKSAYLCTKAVSKIMLK-QKS----GKIINITS---------------IAGIIGNAGQA 153

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            Y+ SK A ++      A E A +       I  N+V PG I T
Sbjct: 154 NYAASK-AGLIGFTKSIAKEFAAK------GIYCNAVAPGIIKT 190

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 83.7 bits (208), Expect = 3e-19
 Identities = 59/245 (24%), Positives = 92/245 (37%), Gaps = 50/245 (20%)

Query: 7   NRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
           +     G   + T    +         AIVTGA+ GIG   A  LA RG  V+      A
Sbjct: 4   HHHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA 63

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
             + +     +     +     L+++   +V         +   LN+L+NNAGI      
Sbjct: 64  GAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI------ 115

Query: 127 LSKDNI-----ELQF----ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL 177
            ++D +     + ++     TN    F L+  +L  M K AR     GRI+N++S     
Sbjct: 116 -TQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK-ARG----GRIVNITS----- 164

Query: 178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANIL-----HANELARRLKEDGVDITANSVHP 232
                     +   +G  G   Y+ +K A +       A E+  R       IT N V P
Sbjct: 165 ----------VVGSAGNPGQVNYAAAK-AGVAGMTRALAREIGSR------GITVNCVAP 207

Query: 233 GAIAT 237
           G I T
Sbjct: 208 GFIDT 212

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 49/235 (20%), Positives = 80/235 (34%), Gaps = 39/235 (16%)

Query: 16  ASSTAEEVTDGIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMG-VRDIAAGKDVK 72
            ++  E + D +   G   +VTGA    G+G E AR  A  G  V +         ++  
Sbjct: 5   QATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV 64

Query: 73  ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKD 130
           + + K     K  A +  + S  S      +      Q++  I NAG    +  +  S +
Sbjct: 65  KELEKTYG-IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVE 123

Query: 131 NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKIN 189
                   +  G F     +    K+      G G ++  +S  GH             N
Sbjct: 124 AWNHVVQVDLNGTFHCAKAVGHHFKE-----RGTGSLVITASMSGH-----------IAN 167

Query: 190 DPSGYNGFRAYSQSKLANILH-----ANELARRLKEDGVDITANSVHPGAIATNI 239
            P       +Y+ +K A  +H     ANE              NS+ PG I T +
Sbjct: 168 FP---QEQTSYNVAK-AGCIHMARSLANEWRDF-------ARVNSISPGYIDTGL 211

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 53/224 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   A+VTGA+ GIG   A  LA  G  V +     A+     + +V  I +A  +  A+
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAAGAKVAVNY---ASSAGAADEVVAAIAAAGGEAFAV 83

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + D+S  + V    +    +  +L++L+NNAGI       ++D +        +      
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGI-------TRDTLLLRMKRDDWQSVLDL 136

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           N  G FL +      M K  R     GRIIN++S               +    G  G  
Sbjct: 137 NLGGVFLCSRAAAKIMLK-QRS----GRIINIAS---------------VVGEMGNPGQA 176

Query: 199 AYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            YS +K A ++      A ELA R       IT N+V PG IAT
Sbjct: 177 NYSAAK-AGVIGLTKTVAKELASR------GITVNAVAPGFIAT 213

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 82.9 bits (206), Expect = 5e-19
 Identities = 57/221 (25%), Positives = 85/221 (38%), Gaps = 53/221 (23%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
             +VTGA+ GIG   A  L   G  V++     A      E + K+I +   +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNY---ARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHL 141
           +S  A V             +++++NNAGI       ++D +     + Q+      N  
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI-------TRDTLLIRMKKSQWDEVIDLNLT 112

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           G FL T      M K  RK    GRIIN++S               +    G  G   Y+
Sbjct: 113 GVFLCTQAATKIMMK-KRK----GRIINIAS---------------VVGLIGNIGQANYA 152

Query: 202 QSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            +K A ++      A E A R      +I  N V PG IA+
Sbjct: 153 AAK-AGVIGFSKTAAREGASR------NINVNVVCPGFIAS 186

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 83.3 bits (207), Expect = 6e-19
 Identities = 57/242 (23%), Positives = 89/242 (36%), Gaps = 54/242 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G TA++TG   G+G   A  LA  G  +   + D                D+ ET V  
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIA--ICDRCENSDVVGYPLATADDLAET-VAL 65

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
           +     +  + ++D+   A++ +F +E       ++I I NAGI  +   L  +    Q+
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALLPEVESAQW 123

Query: 137 ----ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
                TN  G F     +   M K        GRI+ VSS         G          
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSSML-------GHS-------- 163

Query: 193 GYNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR 247
                 +Y  SK     L     A++L          IT N+V PG I T +  ++ +F 
Sbjct: 164 ANFAQASYVSSKWGVIGLTKCA-AHDLVGY------GITVNAVAPGNIETPMTHNDFVFG 216

Query: 248 SM 249
           +M
Sbjct: 217 TM 218

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 82.5 bits (205), Expect = 7e-19
 Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 53/222 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A +LA RG  V+      +  + + + +           M L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMAL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           ++++  S+         +   ++IL+NNAGI       ++DN+     E ++     TN 
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNL 115

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
              F L+  +L  M K  R+    GRIINV S               +    G  G   Y
Sbjct: 116 TSIFRLSKAVLRGMMK-KRQ----GRIINVGS---------------VVGTMGNAGQANY 155

Query: 201 SQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           + +K A ++      A E+A R       +T N+V PG I T
Sbjct: 156 AAAK-AGVIGFTKSMAREVASR------GVTVNTVAPGFIET 190

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 83.0 bits (206), Expect = 8e-19
 Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 50/221 (22%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGA  GIG E A++LA    HV+   R   +   V + I       +      D
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGD 101

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHL 141
           +S    +    ++   +H  ++IL+NNAGI       ++DN+       ++     TN  
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLRTNLN 154

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
             F +T  +   M    R     GRIIN+SS               I   +G  G   YS
Sbjct: 155 SLFYITQPISKRMIN-NRY----GRIINISS---------------IVGLTGNVGQANYS 194

Query: 202 QSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
            SK A ++      A ELA R      +IT N++ PG I++
Sbjct: 195 SSK-AGVIGFTKSLAKELASR------NITVNAIAPGFISS 228

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 47/223 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
               A++T  T G+G +    L  +G  V +    D  A + +KET        ++  ++
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQ 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATN 139
            D++    +     E      +++ LINNAG         +        E ++      N
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGN 118

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRA 199
               F L  L++  M+K        GRIIN   +G              +   G+    A
Sbjct: 119 LTAVFHLLKLVVPVMRK-QNF----GRIINYGFQG-------------ADSAPGWIYRSA 160

Query: 200 YSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           ++ +K   ++      A E A         ITAN V PG I  
Sbjct: 161 FAAAK-VGLVSLTKTVAYEEAEY------GITANMVCPGDIIG 196

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 56/222 (25%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA  GIG  T  + A  G  +V    +    ++  E +           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++  ASV    +E      +L+ +++ AGI       ++DN         +      N 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
            G FL+     + M++        G I+  +S          +         G  G   Y
Sbjct: 110 TGSFLVAKAASEAMRE-KNP----GSIVLTASRV-------YL---------GNLGQANY 148

Query: 201 SQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           + S  A ++      A EL R        I  N++ PG I T
Sbjct: 149 AASM-AGVVGLTRTLALELGRW------GIRVNTLAPGFIET 183

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 55/225 (24%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
            G  ++VTG+T GIG   A  LA  G  V++         +  + + +EI +    K   
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASAGSTVII----TGTSGERAKAVAEEIANKYGVKAHG 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----A 137
           +E++L S  S+     E       ++IL+NNAGI       ++D +      L +     
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI-------TRDKLFLRMSLLDWEEVLK 114

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF 197
            N  G FL+T   L  M K  R     GRI+N+SS               +   +G  G 
Sbjct: 115 VNLTGTFLVTQNSLRKMIK-QRW----GRIVNISS---------------VVGFTGNVGQ 154

Query: 198 RAYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
             YS +K A ++      A ELA R      ++  N+V PG I T
Sbjct: 155 VNYSTTK-AGLIGFTKSLAKELAPR------NVLVNAVAPGFIET 192

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 39/212 (18%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG  SG+G   A  L  RG  VV+         D++           +  +E D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVL--------DLRRE------GEDLIYVEGDVT 49

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN------IELQFATNHLGHFLL 146
               VR  A     +   L  +++ AG+     +L K+              N LG F +
Sbjct: 50  REEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 147 TNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
             L    M++    + G+ G I+N +S    +A  EG    +I       G  AY+ SK 
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTAS----VAAFEG----QI-------GQAAYAASKG 153

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIAT 237
             +      AR L   G  I   +V PG   T
Sbjct: 154 GVVALTLPAARELAGWG--IRVVTVAPGLFDT 183

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 54/222 (24%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM---EL 89
            A++TGA+ GIG   A  LA  G  + +        ++  E + +E        +     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHY---GQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           +L    +      +       L+ L+NNAGI       ++D +     +  +      N 
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI-------TRDTLLVRMKDEDWEAVLEANL 112

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
              F  T   +  M K AR     GRI+N++S               +    G  G   Y
Sbjct: 113 SAVFRTTREAVKLMMK-ARF----GRIVNITS---------------VVGILGNPGQANY 152

Query: 201 SQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
             SK A ++      A E A+R       IT N+V PG I T
Sbjct: 153 VASK-AGLIGFTRAVAKEYAQR------GITVNAVAPGFIET 187

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 57/217 (26%), Positives = 84/217 (38%), Gaps = 35/217 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTG  SG+G  T + L   G  VV  V DI       E +V ++   +      
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVV--VLDIRG-----EDVVADL-GDRARFAAA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI--ELQFA----TNHLGH 143
           D++  A+V + A +       L I++N AG      +LS+D +     F      N +G 
Sbjct: 60  DVTDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 144 FLLTNLLLDTMKKT---ARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
           F +  L  + + KT      +   G IIN +S            FD      G  G  AY
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTAS---------VAAFD------GQIGQAAY 163

Query: 201 SQSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
           S SK   +     +AR L      I   ++ PG   T
Sbjct: 164 SASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDT 198

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 82.5 bits (204), Expect = 2e-18
 Identities = 46/248 (18%), Positives = 75/248 (30%), Gaps = 63/248 (25%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAME 88
           +   A+VTGA   +G   A  L   G  V +   R  A    +  T+    P      ++
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQ 103

Query: 89  LDLSSLASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLSKD 130
            DLS++A+     ++ +                     + ++L+NNA     TP + + +
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 131 ---------------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEG 174
                               F +N +  + L       +  T  K  G    IIN+    
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD-- 221

Query: 175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI-----LHANELARRLKEDGVDITANS 229
                                G+  Y+ +K A         A ELA         I  N 
Sbjct: 222 -------------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRVNG 261

Query: 230 VHPGAIAT 237
           V PG    
Sbjct: 262 VGPGLSVL 269

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 59/226 (26%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ID +G T+++TGA+SGIG+  AR+L   G  V++   +    K +   +           
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTI 64

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
              +L++     N  S+ +     L+IL+ NAGI       + D + ++           
Sbjct: 65  EVCNLANKEECSNLISKTS----NLDILVCNAGI-------TSDTLAIRMKDQDFDKVID 113

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNG 196
            N   +F+L    +  M +  R     GRIIN+SS  G                 +G  G
Sbjct: 114 INLKANFILNREAIKKMIQ-KRY----GRIINISSIVGI----------------AGNPG 152

Query: 197 FRAYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
              Y  SK A ++      + E+A R       IT N+V PG I +
Sbjct: 153 QANYCASK-AGLIGMTKSLSYEVATR------GITVNAVAPGFIKS 191

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 80.6 bits (200), Expect = 3e-18
 Identities = 44/213 (20%), Positives = 69/213 (32%), Gaps = 43/213 (20%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG + GIG   A  L  RG  V +  R+                S     +  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ----------SLGAVPLPTDLE 53

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
                +            L++L++ A + +  P + LS +        +    FLL    
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
              M +      G GR++ + S    +               G     AY+ +K   +L 
Sbjct: 113 APHMAE-----AGWGRVLFIGS----VTTFTA---------GGPVPIPAYTTAK-TALLG 153

Query: 211 -----ANELARRLKEDGVDITANSVHPGAIATN 238
                A E AR        I  N + PG + T 
Sbjct: 154 LTRALAKEWARL------GIRVNLLCPGYVETE 180

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 57/226 (25%), Positives = 88/226 (38%), Gaps = 55/226 (24%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
              +G  A+VTGAT GIG   AR    +G  V +        K++   +        V  
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFV 77

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
              +LS   S++  A     +   ++IL+NNAGI       ++D + ++          A
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI-------TRDGLFVRMQDQDWDDVLA 130

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNG 196
            N      LT  L+ +M +  R     GRIIN++S  G                  G  G
Sbjct: 131 VNLTAASTLTRELIHSMMR-RRY----GRIINITSIVGV----------------VGNPG 169

Query: 197 FRAYSQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
              Y  +K A ++      A E+A R      +IT N + PG I +
Sbjct: 170 QTNYCAAK-AGLIGFSKALAQEIASR------NITVNCIAPGFIKS 208

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 81.0 bits (201), Expect = 5e-18
 Identities = 53/215 (24%), Positives = 81/215 (37%), Gaps = 32/215 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G   ++TG  SGIG   +   A  G ++   +  +    D  ET  + +    V  + L 
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIA--IAYLDEEGDANET-KQYVEKEGVKCVLLP 103

Query: 90  -DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFL 145
            DLS     ++   E   Q   LNIL+NN            ++ + +E  F  N   +F 
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +T   L  +K+          IIN +S               I    G      YS +K 
Sbjct: 164 VTKAALSHLKQG-------DVIINTAS---------------IVAYEGNETLIDYSATKG 201

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNII 240
           A +     L++ L + G  I  N V PG I T +I
Sbjct: 202 AIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLI 234

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 76.0 bits (188), Expect = 1e-16
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 61/222 (27%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   A+ LA  G  V +  R   A                +  +E+
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEV 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++   +V    +        + +L++NAG+       S D       E +F      N 
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL-------SADAFLMRMTEEKFEKVINANL 113

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
            G F +      +M++  +     GR+I + S               ++   G      Y
Sbjct: 114 TGAFRVAQRASRSMQR-NKF----GRMIFIGS---------------VSGLWGIGNQANY 153

Query: 201 SQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           + SK A ++      A EL++       ++TAN V PG I T
Sbjct: 154 AASK-AGVIGMARSIARELSKA------NVTANVVAPGYIDT 188

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 76.0 bits (188), Expect = 2e-16
 Identities = 55/222 (24%), Positives = 79/222 (35%), Gaps = 61/222 (27%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   AR  A  G  V +             T     P     A++ 
Sbjct: 20  MSRSVLVTGGNRGIGLAIARAFADAGDKVAI-------------TYRSGEPPEGFLAVKC 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++    V     E    H  + +LI NAG+       +KD +     E  F     TN 
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGV-------TKDQLLMRMSEEDFTSVVETNL 119

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY 200
            G F +       M + A+K    GR++ +SS               +    G  G   Y
Sbjct: 120 TGTFRVVKRANRAMLR-AKK----GRVVLISS---------------VVGLLGSAGQANY 159

Query: 201 SQSKLANIL-----HANELARRLKEDGVDITANSVHPGAIAT 237
           + SK A ++      A EL  R      +IT N V PG + T
Sbjct: 160 AASK-AGLVGFARSLARELGSR------NITFNVVAPGFVDT 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 77.0 bits (190), Expect = 4e-16
 Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 36/218 (16%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKEIPS 81
           +D      I+TGA  G+G   +   A  G  VV   +G      G + K  + +V EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 82  AKVDAMELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQF 136
               A+    +   +V +     E  +++   ++++INNAGI+   +   +++ + +L  
Sbjct: 64  NGGVAV----ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVI 119

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG 196
             +  G F +T       +K        GRI+N SS         G+         G  G
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPA-------GLY--------GNFG 159

Query: 197 FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA 234
              Y+ +K A +  A  LA+   +    I AN++ P A
Sbjct: 160 QANYASAKSALLGFAETLAKEGAKYN--IKANAIAPLA 195

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 38/211 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA +G+G E A+  A  G  VV  V D           V EI +A  +A   
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKT----VDEIKAAGGEAW-- 372

Query: 90  DLSSLASVRNFAS---EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGH 143
                  V   +    +  I  +  ++IL+NNAGI+   +   +SK   +     + +G 
Sbjct: 373 --PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGT 430

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQS 203
           F L+ L      +        GRIIN++S         GI         G  G   YS S
Sbjct: 431 FNLSRLAWPYFVEK-----QFGRIINITSTS-------GIY--------GNFGQANYSSS 470

Query: 204 KLANILHANELARRLKEDGVDITANSVHPGA 234
           K   +  +  +A    ++   I  N V P A
Sbjct: 471 KAGILGLSKTMAIEGAKNN--IKVNIVAPHA 499

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 30/219 (13%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKE 78
              +   G   +VTGA  G+G   A   A RG  VV   +G      GK     + +V+E
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 79  IPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQF 136
           I      A+  +  S+ +             ++++++NNAGI+   +   +S ++ ++  
Sbjct: 62  IRRRGGKAV-ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG 196
             +  G F +T    D MKK        GRII  +S         GI         G  G
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASAS-------GIY--------GNFG 160

Query: 197 FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI 235
              YS +KL  +  AN L    +++   I  N++ P A 
Sbjct: 161 QANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG 197

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 74.1 bits (182), Expect = 4e-15
 Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 40/220 (18%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK-------ETIVKEI 79
           +   G  A+VTGA +G+G E A + A RG  VV  V D+              + +V EI
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVV--VNDLGGTHSGDGASQRAADIVVDEI 72

Query: 80  PSAKVDAMELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIEL 134
             A  +A+    +   SV + A   E  I+   +++IL+NNAGI+   +    S+ +  L
Sbjct: 73  RKAGGEAV----ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNL 128

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGY 194
               +  G F  T      MKK        GRII  SS         GI         G 
Sbjct: 129 VNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIMTSSNS-------GIY--------GN 168

Query: 195 NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA 234
            G   Y+ +K+  I  AN +A     +   +  N + P A
Sbjct: 169 FGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTA 206

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 50/226 (22%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--------ETIVKEIPSA 82
           G   IVTGA  GIG   A   A  G  VV  V DI  G D          +++V EI +A
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 83  KVDAMELDLSSLASVRNFASEYNI------QHHQLNILINNAGIM--GTPFMLSKDNIEL 134
             +A+    +  ++V ++     +          L++L+NNAGI+        S++  + 
Sbjct: 85  GGEAV----ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDA 140

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSG-GEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             A +  GHF          +  ++     +GRIIN SS         G++        G
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA-------GLQ--------G 185

Query: 194 YNGFRAYSQSK-----LANILHANELARRLKEDGVDITANSVHPGA 234
             G   YS +K     L  +  A E+ R        +T N++ P A
Sbjct: 186 SVGQGNYSAAKAGIATLTLVG-AAEMGRY------GVTVNAIAPSA 224

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 14/113 (12%)

Query: 11  PSGFSASSTA----EEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
            +G + ++ A         G    G  A+V   T  +G  +A +LA  G  VV+  R + 
Sbjct: 95  SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
             +   +++ K        A   + +  AS               + +     
Sbjct: 155 KAQAAADSVNKRFKVNVTAA---ETADDASRAEAVKG-------AHFVFTAGA 197

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 45/214 (21%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
            G+ +   V GAT  +G   AR +   G  +V+  R  +         ++ +   + +  
Sbjct: 10  PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ--------IQRLAYLEPECR 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
             ++   A +              + +I +AG     +       + + A+        T
Sbjct: 62  VAEMLDHAGLERALRGL-------DGVIFSAG----YYPSRPRRWQEEVASALGQ----T 106

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS------EGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
           N           ++    RI+ V S          L  HEG+ +D +          +Y 
Sbjct: 107 NPFYA----ACLQARVP-RILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKS-----SYV 156

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAI 235
             K A     +E AR    +G+ +      PG +
Sbjct: 157 LCKWA----LDEQAREQARNGLPVVI--GIPGMV 184

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 58/338 (17%), Positives = 101/338 (29%), Gaps = 104/338 (30%)

Query: 22  EVTDGIDGSGLTAIVTGATSGIGTET------ARVL----------ALRGVHVVMGVRDI 65
           +VTD +  +  T I     S   T         + L           L      + +  I
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI--I 333

Query: 66  AAG-KDVKETI--VKEIPSAKVD-AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           A   +D   T    K +   K+   +E  L+ L       +EY     +L++   +A I 
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP-----AEYRKMFDRLSVFPPSAHI- 387

Query: 122 GTPFMLS-----KDNIELQFATNHLGHFLLTN------------LLLDTMKKTARKSGGE 164
               +LS         ++    N L  + L              + L+   K   +    
Sbjct: 388 -PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Query: 165 GRIINVSSEGHRLAYHEGIRFDKINDPS-----GYNGFRAYSQSKLANILHANE------ 213
             I++         Y+    FD  +D        Y  F ++    L NI H         
Sbjct: 447 RSIVD--------HYNIPKTFDS-DDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRM 495

Query: 214 -------LARRLKEDGVDITANSVHPGAIATN----------IIRHNSLF-RSMNTILHA 255
                  L ++++ D     A     G+I             I  ++  + R +N IL  
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNA----SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 256 LPGIAGKCLL---KNVQQVILNF-----------QKQR 279
           LP I    +     ++ ++ L             Q QR
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 33/200 (16%), Positives = 53/200 (26%), Gaps = 43/200 (21%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           + GA+  +G+        RG  V   VR     K   E          +   + D+SSL 
Sbjct: 9   LIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE---------HLKVKKADVSSLD 59

Query: 96  SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMK 155
            V         +      +I+          +  + I+            +   ++D +K
Sbjct: 60  EVCE-----VCKGAD--AVISAFNPGWNNPDIYDETIK------------VYLTIIDGVK 100

Query: 156 KTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELA 215
           K         R + V   G           D    P            K    L    L 
Sbjct: 101 KAGVN-----RFLMVGGAGSLFIAPGLRLMDSGEVPENI-----LPGVKA---LGEFYLN 147

Query: 216 RRLKEDGVDITANSVHPGAI 235
             +KE  +D       P A 
Sbjct: 148 FLMKEKEIDWV--FFSPAAD 165

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +   G+   + GA   +G +  + L   G      V       DV +       S  VDA
Sbjct: 10  LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI-DVFQPEAPAGFSGAVDA 68

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
              DLS+                + +++ + A I+      ++ + +  +  N  G    
Sbjct: 69  RAADLSAPGEAEKLVE------ARPDVIFHLAAIVSGE---AELDFDKGYRINLDG---- 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T  L D ++    K G + R++  SS
Sbjct: 116 TRYLFDAIRIANGKDGYKPRVVFTSS 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.97
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.97
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.96
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.95
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.9
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.89
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.89
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.87
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.86
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.86
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.85
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.85
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.85
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.85
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.84
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.83
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.82
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.82
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.82
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.81
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.81
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.8
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.79
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.79
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.78
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.78
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.78
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.77
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.77
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.76
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.75
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.75
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.74
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.74
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.72
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.69
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.68
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.65
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.64
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.63
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.63
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.58
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.57
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.56
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.55
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.5
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.49
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.48
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.47
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.46
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.31
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.27
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.25
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.1
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.78
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.76
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.65
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.64
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.61
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.57
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.56
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.48
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.43
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.42
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.42
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.41
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.39
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.39
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.35
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.32
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.32
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.32
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.32
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.31
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.28
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.19
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.15
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.13
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.1
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.09
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.07
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.06
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.06
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	98.04
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.04
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.02
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.98
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.95
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.94
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.91
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.9
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.9
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.87
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.86
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.84
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.83
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.8
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.8
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.79
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.78
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.78
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.77
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.77
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.75
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.75
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.7
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.67
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.66
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.64
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.61
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.61
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.6
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.58
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.54
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.52
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.52
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.51
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.48
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.46
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.44
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.43
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.42
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.42
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.38
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.37
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.34
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.33
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.32
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.24
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.24
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.24
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.23
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.2
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.19
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.19
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.19
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.18
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.17
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.17
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.15
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.15
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.14
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.13
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.13
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.11
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.11
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.09
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.08
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.07
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.07
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.07
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.06
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.02
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.02
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.02
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.98
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.98
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.97
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.97
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.97
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.93
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.9
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.82
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.81
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.8
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.79
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.78
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.76
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.76
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.76
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.75
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.75
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.73
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.73
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.72
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.71
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.71
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.71
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.7
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.68
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.67
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.63
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.56
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.54
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.53
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.51
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.49
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.48
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.46
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.45
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.41
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.4
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.4
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.38
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.36
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.35
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.35
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.35
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.3
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.28
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.28
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.27
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.2
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.2
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.2
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.17
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.14
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.13
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.12
1lnq_A	336	MTHK channels, potassium channel related protein;	96.12
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.11
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.11
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.09
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	96.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.05
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.04
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.03
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.99
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.99
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.97
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.94
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.93
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.93
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.92
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.89

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.2e-45  Score=315.84  Aligned_cols=193  Identities=27%  Similarity=0.267  Sum_probs=180.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998775  56899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++|++|++|||||+..   ++.+.+.++|++++++|+.++|+++|+++|+|+++     ++|+||++||.++..      
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~~g~~------  149 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----GKGVIVNTASIAGIR------  149 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC------
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhcC------
Confidence            9999999999999653   46789999999999999999999999999999987     579999999988876      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++..+|++||+|+.+|+++|+.|++++|  ||||+|+||+++||+....
T Consensus       150 ---------~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~  198 (254)
T 4fn4_A          150 ---------GGFAGAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGS  198 (254)
T ss_dssp             ---------SSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSC
T ss_pred             ---------CCCCChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCcccccc
Confidence                     578889999999999999999999999999  9999999999999997654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.1e-45  Score=312.78  Aligned_cols=194  Identities=24%  Similarity=0.303  Sum_probs=180.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999998876  56899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||+.  .++.+.+.++|++++++|+.++|+++|+++|+|.++.    ++|+||++||..+..       
T Consensus        83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~----~~G~IVnisS~~~~~-------  151 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARN----SGGKIINIGSLTSQA-------  151 (255)
T ss_dssp             TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTS-------
T ss_pred             HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcc----CCCEEEEEeehhhcC-------
Confidence            999999999999975  3467899999999999999999999999999997652    468999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       152 --------~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~  200 (255)
T 4g81_D          152 --------ARPTVAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTAL  200 (255)
T ss_dssp             --------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcc
Confidence                    578899999999999999999999999999  9999999999999997753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.2e-43  Score=304.63  Aligned_cols=193  Identities=24%  Similarity=0.323  Sum_probs=174.3

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |+++|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.  +.++.++++|++|+++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999987644 44556555  557899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .+++|++|++|||||+... ..+.+.++|++.+++|+.++++++|+++|+|+++      +|+||++||..+..      
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~------  145 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVT------  145 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHH------
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhcc------
Confidence            9999999999999997543 5678999999999999999999999999999864      68999999999887      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||+|+||+.+..
T Consensus       146 ---------~~~~~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~  194 (258)
T 4gkb_A          146 ---------GQGNTSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNW  194 (258)
T ss_dssp             ---------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC---
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhh
Confidence                     588899999999999999999999999999  9999999999999998754

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8.3e-44  Score=307.42  Aligned_cols=188  Identities=22%  Similarity=0.258  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999888877766     55789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||..  .++.+.+.++|++.+++|+.++|+++|+++|+|++       +|+||+++|..+..       
T Consensus       100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~-------  165 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGST-------  165 (273)
T ss_dssp             HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGS-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhcc-------
Confidence            999999999999975  34778999999999999999999999999999964       57999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||++...
T Consensus       166 --------~~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~  214 (273)
T 4fgs_A          166 --------GTPAFSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVEL  214 (273)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHh
Confidence                    688899999999999999999999999999  9999999999999997764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=9.2e-43  Score=295.83  Aligned_cols=189  Identities=25%  Similarity=0.342  Sum_probs=167.7

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|+..  ++..+++.+.  +.++.++++|++|+++++.+++  
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~--   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT--   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST--
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH--
Confidence            347899999999999999999999999999999999999854  4555566555  5689999999999998877653  


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                         ++++|++|||||+..  ++.+.+.++|++++++|+.++|+++|+++|+|.++    +++|+||++||..+..     
T Consensus        77 ---~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~----g~~G~IVnisS~~~~~-----  144 (247)
T 4hp8_A           77 ---DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK----GRSGKVVNIASLLSFQ-----  144 (247)
T ss_dssp             ---TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS-----
T ss_pred             ---hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----CCCcEEEEEechhhCC-----
Confidence               579999999999753  46789999999999999999999999999999876    2368999999988876     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       145 ----------g~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~  193 (247)
T 4hp8_A          145 ----------GGIRVPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEAL  193 (247)
T ss_dssp             ----------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHH
T ss_pred             ----------CCCCChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhc
Confidence                      578899999999999999999999999999  9999999999999998753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=7.9e-42  Score=291.14  Aligned_cols=183  Identities=22%  Similarity=0.232  Sum_probs=164.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||++|||+++|++|+++|++|++++|+++.+++..    ++  ..++.++++|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            399999999999999999999999999999999987655443    33  457899999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|+||||||...  ++.+.+.++|++++++|+.++|+++|+++|+|+++      +|+||++||..+..           
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~-----------  138 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQ-----------  138 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeeccccc-----------
Confidence            999999999753  36789999999999999999999999999999873      69999999988876           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          +.++...|++||+|+.+|+++|+.|+++ |  ||||+|+||+++|++.++.
T Consensus       139 ----~~~~~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~  186 (247)
T 3ged_A          139 ----SEPDSEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEF  186 (247)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---C
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHH
Confidence                5888999999999999999999999987 7  9999999999999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4e-42  Score=291.28  Aligned_cols=207  Identities=24%  Similarity=0.258  Sum_probs=170.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.++..        .+.++..+++|++|++++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~----~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFEA----L   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHHH----C
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHHh----c
Confidence            4899999999999999999999999999999999997764421        145789999999999999888764    7


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |++|++|||||+..+..+.+.++|++++++|+.++|+++|+++|+|+++      +|+||++||..+..           
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~-----------  139 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTF-----------  139 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTS-----------
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccC-----------
Confidence            8999999999998777889999999999999999999999999999874      69999999988876           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchh-hhhhHHHhhhhHHhhhhcccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF-RSMNTILHALPGIAGKCLLKN  267 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~  267 (282)
                          +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|||.+..... .....+...+|    ......
T Consensus       140 ----~~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~P----lgR~g~  209 (242)
T 4b79_A          140 ----GSADRPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTP----LARWGE  209 (242)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCT----TCSCBC
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCC----CCCCcC
Confidence                588899999999999999999999999999  9999999999999998764322 22223333332    223445


Q ss_pred             hHHHHhh
Q 023438          268 VQQVILN  274 (282)
Q Consensus       268 ~~~~~~~  274 (282)
                      |+|.+..
T Consensus       210 peeiA~~  216 (242)
T 4b79_A          210 APEVASA  216 (242)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=8.3e-41  Score=287.79  Aligned_cols=182  Identities=20%  Similarity=0.243  Sum_probs=164.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+...          .  ..+..++++|++++++++.+++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------G--LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------T--SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------C--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999998542          1  22456789999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++|++|++|||||+..    ++.+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||..+..     
T Consensus        75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Iv~isS~~~~~-----  144 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-----GSGVVVHVTSIQRVL-----  144 (261)
T ss_dssp             HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-----CCceEEEEEehhhcc-----
Confidence            9999999999999642    35688999999999999999999999999999987     579999999988766     


Q ss_pred             ccccCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.+ +...|++||+|+.+|+++|+.|++++|  ||||+|+||+++||+...
T Consensus       145 ----------~~~~~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          145 ----------PLPESTTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             ----------CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHH
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhh
Confidence                      344 578899999999999999999999999  999999999999998764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.1e-40  Score=284.10  Aligned_cols=219  Identities=16%  Similarity=0.152  Sum_probs=183.6

Q ss_pred             CCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++|+||++|||||+|  |||+++|++|+++|++|++++|+++.+++..+.+.+. .+.++.++++|++++++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999875  9999999999999999999999998888877766554 3457899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .+++|++|++|||||+..      ...+.++++|...+++|+.+++.+++++.+++++       +|+||++||.++.. 
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~-  152 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEF-  152 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTS-
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEecccccc-
Confidence            999999999999999642      2456788999999999999999999999887653       68999999988876 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhh-hhhHHHhhhh
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFR-SMNTILHALP  257 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~p  257 (282)
                                    +.+++..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.+...... ........+|
T Consensus       153 --------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~P  216 (256)
T 4fs3_A          153 --------------AVQNYNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKERAP  216 (256)
T ss_dssp             --------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHST
T ss_pred             --------------CcccchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHhcCC
Confidence                          688899999999999999999999999999  99999999999999987653322 2223333332


Q ss_pred             HHhhhhcccChHHHHhh
Q 023438          258 GIAGKCLLKNVQQVILN  274 (282)
Q Consensus       258 ~~~~~~~~~~~~~~~~~  274 (282)
                          ......|+|.++.
T Consensus       217 ----l~R~g~peevA~~  229 (256)
T 4fs3_A          217 ----LKRNVDQVEVGKT  229 (256)
T ss_dssp             ----TSSCCCHHHHHHH
T ss_pred             ----CCCCcCHHHHHHH
Confidence                1223456666654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2e-39  Score=278.92  Aligned_cols=195  Identities=28%  Similarity=0.345  Sum_probs=177.9

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            347789999999999999999999999999999999999999988888888665  557999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++++|+||||||.... ..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..      
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------  152 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-----GGGAILNISSMAGEN------  152 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTC------
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHHcC------
Confidence            9999999999999997543 2378999999999999999999999999999885     568999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       153 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          153 ---------TNVRMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhhc
Confidence                     577889999999999999999999999999  9999999999999987643

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.9e-39  Score=277.34  Aligned_cols=193  Identities=21%  Similarity=0.242  Sum_probs=166.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999888776  5589999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++ +++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..      
T Consensus        80 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  147 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----GQGKIFFTGATASLR------  147 (252)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTC------
T ss_pred             hh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHHcC------
Confidence            88 99999999999754  35678999999999999999999999999999986     568999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEE-EEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITA-NSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v-~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++|+++|+.|+++.|  |+| |+|+||+++|++.+..
T Consensus       148 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          148 ---------GGSGFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-----------
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhcc
Confidence                     578889999999999999999999999999  999 9999999999998764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.2e-39  Score=281.64  Aligned_cols=195  Identities=22%  Similarity=0.214  Sum_probs=179.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..++.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999998888876656669999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.+|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  151 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-----ADAAIVCVNSLLASQ------  151 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----TTEEEEEEEEGGGTS------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCeEEEEECCcccCC------
Confidence            99999999999999753  36688999999999999999999999999999875     578999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+|+++|+++|+.|++++|  |+||+|+||+++||+.+.
T Consensus       152 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  199 (265)
T 3lf2_A          152 ---------PEPHMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRR  199 (265)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhh
Confidence                     578889999999999999999999999999  999999999999998654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.4e-39  Score=275.56  Aligned_cols=190  Identities=28%  Similarity=0.408  Sum_probs=174.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.     .++.++++|++|+++++++++++.+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999988877776663     3578899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..       
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~-------  147 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----RQGRIINVGSVVGTM-------  147 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcC-------
Confidence            9999999999999754  35678999999999999999999999999999886     578999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       148 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          148 --------GNAGQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTS
T ss_pred             --------CCCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhc
Confidence                    578899999999999999999999999999  9999999999999998765

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.5e-39  Score=278.37  Aligned_cols=196  Identities=28%  Similarity=0.343  Sum_probs=178.4

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .|..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|++++++++++
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999988888888765  55788999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||.++..    
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~----  169 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----RGGRIVNITSVVGSA----  169 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCC----
Confidence            9999999999999999753  35678999999999999999999999999999886     578999999988876    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       170 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          170 -----------GNPGQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             -----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHS
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhc
Confidence                       578889999999999999999999999999  9999999999999987654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2e-39  Score=278.01  Aligned_cols=196  Identities=23%  Similarity=0.330  Sum_probs=170.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..++ .++.++++|++|+++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999999888776544 67899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++++|+||||||+... ..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..      
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------  150 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----KNGYIFNVASRAAKY------  150 (250)
T ss_dssp             HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC-----------
T ss_pred             HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEEccHHhcC------
Confidence            9999999999999997532 2377889999999999999999999999999886     578999999988775      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       151 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  199 (250)
T 3nyw_A          151 ---------GFADGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKKA  199 (250)
T ss_dssp             -----------CCTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHT
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhhc
Confidence                     345578999999999999999999999999  9999999999999987643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-38  Score=274.25  Aligned_cols=195  Identities=28%  Similarity=0.369  Sum_probs=177.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. ..++.++++|++|+++++++++++.+
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999988888886642 25799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+...      
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~------  153 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----GSGRVVLTSSITGPIT------  153 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----SSCEEEEECCSBTTTB------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccC------
Confidence            9999999999999753  46788999999999999999999999999999986     5689999999876521      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       154 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  202 (262)
T 3pk0_A          154 --------GYPGWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLEN  202 (262)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTT
T ss_pred             --------CCCCChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCcccccc
Confidence                    577889999999999999999999999999  9999999999999987654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9.2e-39  Score=277.95  Aligned_cols=193  Identities=26%  Similarity=0.349  Sum_probs=172.8

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      .....+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|++++++++
T Consensus        18 ~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           18 LYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             ----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHH
Confidence            334457889999999999999999999999999999999999988877776664     457899999999999999999


Q ss_pred             HHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          102 SEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..  
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--  165 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-----GGGSIINTTSYTATS--  165 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----TCEEEEEECCGGGTS--
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhCc--
Confidence            999999999999999999753  35678999999999999999999999999999875     568999999988765  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                   +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       166 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  212 (277)
T 4dqx_A          166 -------------AIADRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFT  212 (277)
T ss_dssp             -------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHH
T ss_pred             -------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhh
Confidence                         578889999999999999999999999999  99999999999999843

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=9.8e-39  Score=276.93  Aligned_cols=192  Identities=24%  Similarity=0.330  Sum_probs=177.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999988888765  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..       
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iV~isS~~~~~-------  167 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----GYGKIVNIGSLTSEL-------  167 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-------
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCC-------
Confidence            9999999999999753  35678999999999999999999999999999986     568999999988766       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+|+++|+++|+.|++++|  |+||+|+||+++|++.+.
T Consensus       168 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  215 (271)
T 4ibo_A          168 --------ARATVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQA  215 (271)
T ss_dssp             --------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhh
Confidence                    577889999999999999999999999999  999999999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.8e-39  Score=276.17  Aligned_cols=194  Identities=27%  Similarity=0.366  Sum_probs=177.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999988888887633 45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|.++.    .+++||++||..+..       
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~-------  163 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG----EGGAIITVASAAALA-------  163 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS-------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEEcchhhcc-------
Confidence            9999999999999764  356789999999999999999999999999998861    268999999988775       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++|++.+.
T Consensus       164 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  211 (266)
T 4egf_A          164 --------PLPDHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQR  211 (266)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHH
T ss_pred             --------CCCCChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhh
Confidence                    578889999999999999999999999999  999999999999998664

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.3e-38  Score=273.61  Aligned_cols=197  Identities=26%  Similarity=0.303  Sum_probs=176.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999988888765  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|.++.    .+++||++||..+...     
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~----~~g~iv~isS~~~~~~-----  175 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG----LGGTIITTASMSGHII-----  175 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----CCcEEEEECchHhccc-----
Confidence            99999999999999754  356789999999999999999999999999998861    2489999999877642     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              ...++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       176 --------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          176 --------NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             --------CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGG
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccc
Confidence                    0123567899999999999999999999999  9999999999999998754

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=4e-38  Score=273.01  Aligned_cols=191  Identities=26%  Similarity=0.298  Sum_probs=172.9

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888777666     457889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          105 NIQHHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .+++|++|+||||||....    ..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..   
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~---  151 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-----GGGAIVNISSATAHA---  151 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS---
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCHHHcC---
Confidence            9999999999999997522    4578999999999999999999999999999885     578999999988776   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++||+.+.
T Consensus       152 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  199 (271)
T 3tzq_B          152 ------------AYDMSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEV  199 (271)
T ss_dssp             ------------BCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC-
T ss_pred             ------------CCCCChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccc
Confidence                        577889999999999999999999999999  999999999999998773

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-38  Score=277.01  Aligned_cols=196  Identities=32%  Similarity=0.370  Sum_probs=174.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999999999988888887554  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++|++|+||||||+.   .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++...    
T Consensus       101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~----  171 (283)
T 3v8b_A          101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-----GGGAIVVVSSINGTRT----  171 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB----
T ss_pred             HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCceEEEEcChhhccC----
Confidence            9999999999999974   446788999999999999999999999999999986     5789999999876541    


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               .+.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       172 ---------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          172 ---------FTTPGATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             ---------CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTCCT
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCccccc
Confidence                     1356788999999999999999999999999  9999999999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-38  Score=275.13  Aligned_cols=195  Identities=21%  Similarity=0.188  Sum_probs=173.8

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-------------ChhhHHHHHHHHHHhCCCCceeEEEccC
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDL   91 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-------------~~~~~~~~~~~l~~~~~~~~v~~~~~Dv   91 (282)
                      |..+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...  +.++.++.+|+
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~   82 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDT   82 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCC
Confidence            345789999999999999999999999999999999998             566667766666554  45799999999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438           92 SSLASVRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus        92 s~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      +|+++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.++.    ..++||+
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~  158 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG----RGGSIIL  158 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCCEEEE
Confidence            99999999999999999999999999997643  56789999999999999999999999999998861    2689999


Q ss_pred             EcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          170 VSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +||..+..               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+.
T Consensus       159 isS~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          159 ISSAAGMK---------------MQPFMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             ECCGGGTS---------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSH
T ss_pred             EccHhhCC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccc
Confidence            99988776               578889999999999999999999999999  999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.6e-38  Score=277.08  Aligned_cols=195  Identities=19%  Similarity=0.189  Sum_probs=175.0

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC------------hhhHHHHHHHHHHhCCCCceeEEEccCC
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLS   92 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~------------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs   92 (282)
                      |..+++||++|||||++|||+++|++|++.|++|++++|+            .+.+++..+++.+.  +.++.++++|++
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   99 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVR   99 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCC
Confidence            4467899999999999999999999999999999999987            66677777776654  567999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438           93 SLASVRNFASEYNIQHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus        93 ~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      |+++++++++++.+++|++|+||||||+...   ..+.+.++|++.+++|+.+++.++++++|+|.++.    +.++||+
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~Iv~  175 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK----RGGSIVF  175 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----SCEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEE
Confidence            9999999999999999999999999997532   56789999999999999999999999999988751    3689999


Q ss_pred             EcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          170 VSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +||.++..               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       176 isS~~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          176 TSSIGGLR---------------GAENIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             ECCGGGTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSS
T ss_pred             ECChhhcc---------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCccCccccc
Confidence            99988776               578889999999999999999999999999  999999999999999764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3e-38  Score=275.13  Aligned_cols=196  Identities=20%  Similarity=0.180  Sum_probs=175.9

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      |.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+... ..++.++++|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999998888888876421 12789999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          104 YNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.+++|++|+||||||..   .+..+.+.++|++.+++|+.++++++++++|++.++     +.|+||++||..+..   
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~---  156 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-----GGGSFVGISSIAASN---  156 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHS---
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEeCHHHcC---
Confidence            999999999999999973   245678999999999999999999999999999885     578999999988776   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       157 ------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          157 ------------THRWFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             ------------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhh
Confidence                        577888999999999999999999999999  999999999999999764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-38  Score=272.70  Aligned_cols=192  Identities=22%  Similarity=0.288  Sum_probs=176.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ...++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999888888765  5679999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++|++|+||||||..   .+..+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||..+..     
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-----  152 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRH-----  152 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGC-----
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhcc-----
Confidence            9999999999999874   335678999999999999999999999999999885      58999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.+++..|++||+|+++|+++++.|++++|  |+||+|+||+++||+.+.
T Consensus       153 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          153 ----------SQAKYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHH
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHH
Confidence                      578889999999999999999999999999  999999999999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.6e-38  Score=277.16  Aligned_cols=199  Identities=26%  Similarity=0.314  Sum_probs=178.1

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ...-+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. ..++.++++|++|+++++++++
T Consensus        33 ~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           33 RKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHH
Confidence            334467899999999999999999999999999999999999999998888876542 2578999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+...  
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iV~isS~~~~~~--  184 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----GRGRVILTSSITGPVT--  184 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----SSCEEEEECCSBTTTB--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEeChhhccC--
Confidence            99999999999999999753  36688999999999999999999999999999886     5789999999877521  


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                  +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       185 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          185 ------------GYPGWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             ------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHT
T ss_pred             ------------CCCCCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchhhc
Confidence                        567889999999999999999999999999  9999999999999987654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.2e-38  Score=270.04  Aligned_cols=190  Identities=30%  Similarity=0.378  Sum_probs=173.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998887777665     457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||...  +..+.+.++|++.+++|+.++++++++++|+|+++.    ..++||++||..+..        
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~--------  145 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG----KAGRVISIASNTFFA--------  145 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHH--------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCcEEEEECchhhcc--------
Confidence            999999999999753  356789999999999999999999999999998861    268999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       146 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  194 (247)
T 3rwb_A          146 -------GTPNMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKAS  194 (247)
T ss_dssp             -------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTS
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCcccccc
Confidence                   578889999999999999999999999999  9999999999999987754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.3e-37  Score=266.19  Aligned_cols=191  Identities=27%  Similarity=0.381  Sum_probs=173.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888887777654  457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     + ++||++||.++..        
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~--------  147 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-----K-GTVVQMSSIAGRV--------  147 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----T-CEEEEECCGGGTC--------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----C-CEEEEEccHHhcC--------
Confidence            999999999999753  35678999999999999999999999999999875     3 8999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       148 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          148 -------NVRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGC
T ss_pred             -------CCCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcc
Confidence                   567888999999999999999999999999  9999999999999987653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.2e-38  Score=270.82  Aligned_cols=211  Identities=20%  Similarity=0.239  Sum_probs=178.8

Q ss_pred             CCCCCCCCCcccccCCCCCCCCEEEEecCC-ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEc
Q 023438           11 PSGFSASSTAEEVTDGIDGSGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL   89 (282)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~lItG~s-~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~   89 (282)
                      |+.+++...+..+.....+++|++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~   80 (266)
T 3o38_A            2 PGSMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVC   80 (266)
T ss_dssp             ----CTTSCCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEEC
T ss_pred             CCCcccccCccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEe
Confidence            444555555555555567899999999998 599999999999999999999999999988888886543 457999999


Q ss_pred             cCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeE
Q 023438           90 DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRI  167 (282)
Q Consensus        90 Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~i  167 (282)
                      |++|+++++++++++.++++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++.    +.++|
T Consensus        81 Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~~~i  156 (266)
T 3o38_A           81 DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD----HGGVI  156 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS----CCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEE
Confidence            999999999999999999999999999999754  356789999999999999999999999999998741    36799


Q ss_pred             EEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          168 INVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       168 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      |++||..+..               +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       157 v~~sS~~~~~---------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          157 VNNASVLGWR---------------AQHSQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             EEECCGGGTC---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------
T ss_pred             EEeCCHHHcC---------------CCCCCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhcc
Confidence            9999988765               577889999999999999999999999999  9999999999999997754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-38  Score=271.51  Aligned_cols=189  Identities=25%  Similarity=0.319  Sum_probs=166.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|++|||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999888888765  5578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||.++..         
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~---------  145 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----RSGQIINIGSIGALS---------  145 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCeEEEEEcCHHHcc---------
Confidence            99999999999753  35678999999999999999999999999999886     578999999988776         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            +.++...|++||+|+++|+++|+.|+ + |  ||||+|+||+++|++....
T Consensus       146 ------~~~~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          146 ------VVPTAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC--------
T ss_pred             ------cCCCChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccc
Confidence                  57888999999999999999999998 4 7  9999999999999997654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.9e-38  Score=274.56  Aligned_cols=195  Identities=23%  Similarity=0.261  Sum_probs=176.3

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      +.+.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|.++++.+++
T Consensus        25 ~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~  102 (275)
T 4imr_A           25 LETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIE  102 (275)
T ss_dssp             HHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHH
Confidence            34457899999999999999999999999999999999999999999888888765  5679999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.+. +++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..   
T Consensus       103 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~---  173 (275)
T 4imr_A          103 RAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----KWGRVVSIGSINQLR---  173 (275)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS---
T ss_pred             HHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCC---
Confidence            99877 89999999999753  35678999999999999999999999999999886     578999999987765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       174 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          174 ------------PKSVVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             ------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHH
T ss_pred             ------------CCCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCccccc
Confidence                        466677899999999999999999999999  999999999999998764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.9e-38  Score=272.87  Aligned_cols=194  Identities=30%  Similarity=0.382  Sum_probs=174.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998 666667766666654  557999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||.++..     
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----  170 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----RSGRIINIASVVGEM-----  170 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCHHHHH-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcC-----
Confidence            999999999999999764  35678999999999999999999999999999886     578999999988876     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....
T Consensus       171 ----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  219 (269)
T 4dmm_A          171 ----------GNPGQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSEL  219 (269)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCHH
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCcccccc
Confidence                      577889999999999999999999999999  9999999999999997643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5.7e-38  Score=270.22  Aligned_cols=191  Identities=25%  Similarity=0.314  Sum_probs=174.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999986 89988888888887654  5579999999999999999999999999


Q ss_pred             CCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |++|+||||||..  .+..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||.++..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~---------  146 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-----GGGHIVSISSLGSIR---------  146 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEEEEGGGTS---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhCC---------
Confidence            9999999999964  345678999999999999999999999999999985     568999999988765         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                            +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+...
T Consensus       147 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          147 ------YLENYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             ------BCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCT
T ss_pred             ------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcc
Confidence                  577889999999999999999999999999  99999999999999987653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-37  Score=265.10  Aligned_cols=193  Identities=30%  Similarity=0.398  Sum_probs=177.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888887765  55799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||||+...  ..+.+.+++++.+++|+.+++.++++++|++.++     +.++||++||..+..       
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-------  146 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----RWGRIISIGSVVGSA-------  146 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-------
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcc-------
Confidence            99999999999997643  5578999999999999999999999999999886     568999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       147 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          147 --------GNPGQTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTS
T ss_pred             --------CCCCcHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhc
Confidence                    577889999999999999999999999998  9999999999999998765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-38  Score=267.44  Aligned_cols=187  Identities=20%  Similarity=0.162  Sum_probs=164.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999998888777666     2258999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||.++..         
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~---------  140 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQV---------  140 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCS---------
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcC---------
Confidence            99999999999753  35678999999999999999999999999999874      46999999988776         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++....
T Consensus       141 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          141 ------GKANESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             ------SCSSHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC----
T ss_pred             ------CCCCCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhcc
Confidence                  577889999999999999999999999999  9999999999999997654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=9.4e-38  Score=271.92  Aligned_cols=192  Identities=27%  Similarity=0.276  Sum_probs=173.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC------------hhhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~------------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.  +.++.++++|++|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDR   83 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence            46889999999999999999999999999999999997            45556665555544  45799999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ++++++++++.+.+|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS  158 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----NYGRIVTVSS  158 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECC
Confidence            9999999999999999999999999753  35688999999999999999999999999999886     5789999999


Q ss_pred             CcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          173 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..+..               +.++...|+++|+|+++|+++|+.|++++|  |+||+|+||+++||+.+.
T Consensus       159 ~~~~~---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          159 MLGHS---------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             GGGGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSS
T ss_pred             hhhcC---------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccc
Confidence            88776               577889999999999999999999999999  999999999999999764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.7e-38  Score=272.81  Aligned_cols=192  Identities=24%  Similarity=0.217  Sum_probs=165.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998887777666     35789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++|++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|+++..   ++++||++||..+..      
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~------  169 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP---RGGRIINNGSISATS------  169 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCSSTTS------
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC---CCcEEEEECchhhcC------
Confidence            9999999999999753   4567899999999999999999999999999987510   258999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       170 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  218 (272)
T 4dyv_A          170 ---------PRPYSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKM  218 (272)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC-------
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhh
Confidence                     577889999999999999999999999999  9999999999999997754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-38  Score=275.88  Aligned_cols=193  Identities=25%  Similarity=0.351  Sum_probs=178.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .+++||++|||||++|||+++|++|++.|+   +|++++|+.+.+++..+++.+.+++.++.++.+|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999998   99999999999999999988877677899999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.+++|++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..   
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~---  180 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRD---  180 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS---
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEECChhhcC---
Confidence            9999999999999999753   36678999999999999999999999999999886     578999999988776   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                  +.++...|+++|+|+++|+++|+.|+++.|  |+||+|+||+++|++..
T Consensus       181 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          181 ------------AYPTGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSL  227 (287)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHH
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCcccc
Confidence                        578889999999999999999999999999  99999999999999854

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=9.9e-38  Score=271.38  Aligned_cols=191  Identities=20%  Similarity=0.200  Sum_probs=174.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34899999999999999999999999999999999999998888888876544 45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||...  +..+.+.++|++.+++|+.++++++++++|+|.++     +.++||++||..+..       
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-------  169 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----HGGVIVNITATLGNR-------  169 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCSHHHH-------
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCC-------
Confidence            9999999999999653  35678999999999999999999999999998875     468999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                              +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.
T Consensus       170 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          170 --------GQALQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEG  215 (277)
T ss_dssp             --------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHH
T ss_pred             --------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchh
Confidence                    577889999999999999999999999999  9999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-38  Score=273.71  Aligned_cols=192  Identities=28%  Similarity=0.309  Sum_probs=174.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999988888877553  557999999999999999999999999


Q ss_pred             CCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +|++|+||||||+.   .+..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+...      
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~------  151 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTA------  151 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCSBTTTB------
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhCcC------
Confidence            99999999999965   345678999999999999999999999999999985     5789999999877621      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++||+...
T Consensus       152 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          152 --------GFAGVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGG
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhh
Confidence                    577889999999999999999999999999  999999999999998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.1e-37  Score=266.42  Aligned_cols=191  Identities=28%  Similarity=0.333  Sum_probs=172.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999887 456677777777654  557899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..        
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  146 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----RSGAIINLSSVVGAV--------  146 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcC--------
Confidence            999999999999753  35678999999999999999999999999999886     578999999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       147 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          147 -------GNPGQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCS
T ss_pred             -------CCCCChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCccccc
Confidence                   577889999999999999999999999999  9999999999999998754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.4e-38  Score=271.54  Aligned_cols=190  Identities=27%  Similarity=0.345  Sum_probs=167.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988877766554     45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..       
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~Iv~isS~~~~~-------  165 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----RYGRIINITSIVGVV-------  165 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCC-----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHHcC-------
Confidence            9999999999999753  35678889999999999999999999999999886     578999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       166 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          166 --------GNPGQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHTC
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhcc
Confidence                    567889999999999999999999999999  9999999999999987754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.4e-37  Score=267.89  Aligned_cols=194  Identities=28%  Similarity=0.286  Sum_probs=174.8

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888877777654  457899999999999999999999


Q ss_pred             HhcC-CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          105 NIQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       105 ~~~~-g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      .+++ +++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..    
T Consensus        81 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~----  151 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGAL----  151 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTS----
T ss_pred             HHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc----
Confidence            9998 89999999999753  35678899999999999999999999999999875     468999999987765    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                 +.++...|+++|+++++++++++.|+++.|  |+||+|+||.++|++...
T Consensus       152 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          152 -----------AVPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHH
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchhh
Confidence                       467788999999999999999999999988  999999999999998653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1e-37  Score=272.30  Aligned_cols=195  Identities=22%  Similarity=0.200  Sum_probs=173.6

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC----------------hhhHHHHHHHHHHhCCCCceeEEE
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD----------------IAAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~----------------~~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++.+.  +.++.+++
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   82 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAE   82 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEE
Confidence            3457899999999999999999999999999999999987                56666666666544  45799999


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG  165 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g  165 (282)
                      +|++|+++++++++++.+++|++|+||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++.    +++
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g  158 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG----RGG  158 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC----CCc
Confidence            99999999999999999999999999999997532   55789999999999999999999999999998851    368


Q ss_pred             eEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          166 RIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       166 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +||++||..+..               +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++.+.
T Consensus       159 ~iv~isS~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          159 SIILTSSVGGLK---------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             EEEEECCGGGTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSS
T ss_pred             EEEEECchhhcc---------------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccc
Confidence            999999988776               578889999999999999999999999999  999999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.8e-38  Score=269.96  Aligned_cols=192  Identities=21%  Similarity=0.216  Sum_probs=172.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888777543  457999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||...  +..+.+.++|++.+++|+.++++++++++|+|.++    +..++||++||..+..        
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~--------  148 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK----GIKGNIINMVATYAWD--------  148 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEECCGGGGS--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----CCCcEEEEECchhhcc--------
Confidence            999999999999753  45678999999999999999999999999999654    1468999999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~-~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|++||+|+++|+++++.|++ +.|  |+||+|+||+++|++...
T Consensus       149 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          149 -------AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-
T ss_pred             -------CCCCcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchh
Confidence                   577889999999999999999999997 678  999999999999997654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.4e-38  Score=274.99  Aligned_cols=192  Identities=22%  Similarity=0.290  Sum_probs=176.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999999999988888765  557999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|+|.++.    ..++||++||.++..        
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~--------  173 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG----TGGHIAFTASFAGLV--------  173 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCGGGTS--------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC----CCcEEEEeCchhhcC--------
Confidence            999999999999753  356789999999999999999999999999998861    268999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       174 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          174 -------PNAGLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccc
Confidence                   578899999999999999999999999999  999999999999999764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.2e-38  Score=272.33  Aligned_cols=189  Identities=28%  Similarity=0.343  Sum_probs=172.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||++|||||++|||+++|++|++.|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998877777665     45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..       
T Consensus       100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~-------  167 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-----GGGAIVNLSSLAGQV-------  167 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc-------
Confidence            9999999999999753  36678999999999999999999999999999885     578999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++||+.+.
T Consensus       168 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          168 --------AVGGTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHH
Confidence                    578889999999999999999999999999  999999999999998654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-37  Score=271.01  Aligned_cols=193  Identities=25%  Similarity=0.298  Sum_probs=174.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-------------ChhhHHHHHHHHHHhCCCCceeEEEccCCC
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-------------~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++.+.  +.++.++.+|++|
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRD   88 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCC
Confidence            4689999999999999999999999999999999998             666777777666554  5679999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEc
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vs  171 (282)
                      +++++++++++.+++|++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++.    .+++||++|
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~is  164 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG----NGGSIVVVS  164 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCCEEEEEc
Confidence            99999999999999999999999999754  356789999999999999999999999999998861    268999999


Q ss_pred             CCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      |..+..               +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++||+.+.
T Consensus       165 S~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          165 SSAGLK---------------ATPGNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             CGGGTS---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCH
T ss_pred             chhhcc---------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccch
Confidence            988776               578889999999999999999999999999  999999999999999764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.2e-38  Score=270.01  Aligned_cols=186  Identities=30%  Similarity=0.372  Sum_probs=169.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877776665     347899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|++|||||...  +..+.+.++|++.+++|+.++++++++++|++++       +++||++||.++..        
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~--------  144 (255)
T 4eso_A           80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEG--------  144 (255)
T ss_dssp             HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSS--------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcC--------
Confidence            999999999999753  3567899999999999999999999999998854       47999999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++||+...
T Consensus       145 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          145 -------GHPGMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             -------BCTTBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTC
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCccccc
Confidence                   577889999999999999999999999999  999999999999998764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.5e-37  Score=266.23  Aligned_cols=190  Identities=23%  Similarity=0.314  Sum_probs=172.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998887777665     44688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||...  +..+.+.++|++.+++|+.++++++++++|++.++.    .+++||++||.++..       
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~-------  147 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG----RGGKIINMASQAGRR-------  147 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS-------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEECChhhcc-------
Confidence            9999999999999754  356789999999999999999999999999998751    268999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++||+.+.
T Consensus       148 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  195 (259)
T 4e6p_A          148 --------GEALVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDG  195 (259)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHH
T ss_pred             --------CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhh
Confidence                    577889999999999999999999999999  999999999999998664

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-37  Score=269.01  Aligned_cols=194  Identities=24%  Similarity=0.324  Sum_probs=175.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..++.++.++.+|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999988888888877665456789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++|++|+||||||+..   +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  157 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIR------  157 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcc------
Confidence            9999999999999753   35577899999999999999999999999999876     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       158 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          158 ---------GIGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             ---------BCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHH
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhc
Confidence                     467788999999999999999999999988  999999999999998653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.1e-37  Score=271.03  Aligned_cols=196  Identities=21%  Similarity=0.201  Sum_probs=170.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC------------hhhHHHHHHHHHHhCCCCceeEEEccCCC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~------------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.  +.++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            467899999999999999999999999999999999987            66666666666555  5579999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +++++++++++.+++|++|+||||||+....  .+.++|++.+++|+.++++++++++|+|.++.    ..++||++||.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMS--AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG----TGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCS--STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEEccH
Confidence            9999999999999999999999999975432  26899999999999999999999999998861    36899999998


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ++..+.           ..+.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       160 ~~~~~~-----------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          160 AGLAGV-----------GSADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             GGTSCC-----------CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSS
T ss_pred             HhcCCC-----------ccCCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchh
Confidence            876520           01226678899999999999999999999999  999999999999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-37  Score=265.81  Aligned_cols=195  Identities=26%  Similarity=0.285  Sum_probs=170.8

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ...+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|++++++++++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   91 (273)
T 1ae1_A           14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQT   91 (273)
T ss_dssp             --CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999998888877777654  45789999999999999999999


Q ss_pred             HHhcC-CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          104 YNIQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       104 i~~~~-g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.+.+ +++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..   
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~---  163 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFS---  163 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTS---
T ss_pred             HHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHhhcC---
Confidence            99998 89999999999753  35678899999999999999999999999999875     468999999988765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++||+...
T Consensus       164 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          164 ------------ALPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------
T ss_pred             ------------CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhh
Confidence                        467888999999999999999999999988  999999999999998654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-37  Score=270.80  Aligned_cols=195  Identities=26%  Similarity=0.273  Sum_probs=169.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      -.++++|++|||||++|||+++|++|+++|++|++++| +.+.++...+++.+.. +.++.++.+|++|+++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999 5666666666665432 457999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----  168 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----GWGRIINIASAHGLV-----  168 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCccccc-----
Confidence            999999999999999753  35678999999999999999999999999999886     568999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       169 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          169 ----------ASPFKSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC------
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhh
Confidence                      577889999999999999999999999999  9999999999999997653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.7e-37  Score=268.55  Aligned_cols=191  Identities=26%  Similarity=0.362  Sum_probs=173.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+++..+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            457789999999999999999999999999999999999999999999999887766778899999999999887765  


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                        +++++|++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----  149 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-----KEGRVIFIASEAAIM-----  149 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TEEEEEEECCGGGTS-----
T ss_pred             --hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEEcchhhcc-----
Confidence              4689999999999754  35678899999999999999999999999999885     468999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|++||+|+++|+++++.|+++.|  |+||+|+||.++|++.+
T Consensus       150 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~  196 (267)
T 3t4x_A          150 ----------PSQEMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVE  196 (267)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHH
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHH
Confidence                      578889999999999999999999999998  99999999999999755

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.5e-37  Score=267.41  Aligned_cols=190  Identities=21%  Similarity=0.281  Sum_probs=167.3

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +..++.+|++|||||++|||+++|++|++.|++|++++|+.+.+++.        ...++.++.+|++|.++++++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHH
Confidence            45678899999999999999999999999999999999997654332        1336889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.+|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..     
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~IV~isS~~~~~-----  151 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----NCGTIINISSIAGKK-----  151 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-----
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhCC-----
Confidence            999999999999999753  46678999999999999999999999999999886     578999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.....
T Consensus       152 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          152 ----------TFPDHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCS
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhccc
Confidence                      578889999999999999999999999999  99999999999999987653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.4e-37  Score=270.80  Aligned_cols=190  Identities=30%  Similarity=0.370  Sum_probs=171.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999998888888665  5579999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHH--HHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLD--TMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      |++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|  .++++     +.++||++||.++..       
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~~g~iV~isS~~~~~-------  167 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----GWGRIVNIASTGGKQ-------  167 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----TCEEEEEECCGGGTS-------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----CCcEEEEECChhhcc-------
Confidence            99999999999753  356789999999999999999999999999  47765     468999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       168 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          168 --------GVMYAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHH
T ss_pred             --------CCCCChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHH
Confidence                    578889999999999999999999999999  999999999999998654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.4e-38  Score=268.82  Aligned_cols=196  Identities=25%  Similarity=0.250  Sum_probs=161.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++     +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999998877766665     3468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC--C----CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCccccc
Q 023438          106 IQHHQLNILINNAGIMGT--P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~--~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~~~  178 (282)
                      +++|++|+||||||....  .    .+.+.++|++.+++|+.++++++++++|+|+++... .++.++||++||.++.. 
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-  155 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-  155 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-
Confidence            999999999999997643  1    257889999999999999999999999999874221 12468999999988876 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       156 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~  204 (257)
T 3tpc_A          156 --------------GQIGQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGM  204 (257)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC-----
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccC
Confidence                          577889999999999999999999999999  9999999999999997654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-37  Score=271.56  Aligned_cols=196  Identities=24%  Similarity=0.236  Sum_probs=168.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +..+.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999888888886653 33468999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++|++|+||||||..   .+..+.+.++|++.+++|+.+++.++++++|+|+++..   +.++||++||..+..      
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~------  178 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP---RGGRIINNGSISAQT------  178 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCGGGTC------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCcEEEEECCHHhCC------
Confidence            999999999999975   34567899999999999999999999999999987510   258999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       179 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          179 ---------PRPNSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC------
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhh
Confidence                     578889999999999999999999999999  9999999999999997654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-38  Score=270.06  Aligned_cols=190  Identities=29%  Similarity=0.359  Sum_probs=162.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +.+++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            55789999999999999999999999999999988 45666666666666554  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|++       +++||++||..+..      
T Consensus       101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~------  167 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGL------  167 (267)
T ss_dssp             HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHH------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhcc------
Confidence            99999999999999753  3567899999999999999999999999999854       47999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       168 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          168 ---------LHPSYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC------
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccc
Confidence                     577889999999999999999999999999  999999999999999765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.9e-37  Score=266.01  Aligned_cols=192  Identities=24%  Similarity=0.287  Sum_probs=173.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC--CCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv--s~~~~i~~~~~~i  104 (282)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|+  ++.++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999888888887653 33688999999  9999999999999


Q ss_pred             HhcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          105 NIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      .+++|++|+||||||+.   .+..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..    
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~----  157 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-----DAGSLVFTSSSVGRQ----  157 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGTS----
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-----CCCEEEEECChhhcc----
Confidence            99999999999999974   346778999999999999999999999999999875     568999999988776    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                 +.++...|++||+|+++|+++|+.|+++.   |+||+|+||+++|++...
T Consensus       158 -----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~~  204 (252)
T 3f1l_A          158 -----------GRANWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRAS  204 (252)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHHH
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhhh
Confidence                       57788999999999999999999999764   999999999999998653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.2e-37  Score=261.36  Aligned_cols=191  Identities=29%  Similarity=0.364  Sum_probs=172.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 877777777777554  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  146 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----RHGRIVNIASVVGVT--------  146 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHhcC--------
Confidence            999999999999753  35578899999999999999999999999999875     468999999988766        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++....
T Consensus       147 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  195 (246)
T 2uvd_A          147 -------GNPGQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDVL  195 (246)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSCC
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhhc
Confidence                   467788999999999999999999999988  9999999999999987653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-37  Score=268.30  Aligned_cols=196  Identities=27%  Similarity=0.315  Sum_probs=164.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999995 777777777777654  5579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          106 IQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +++|++|+||||||+.    .+..+.+.++|++.+++|+.++++++++++|+|+++..  ...++||++||.++..    
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~----  176 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVM----  176 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC--------
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhcc----
Confidence            9999999999999973    33567899999999999999999999999999988621  1257999999988776    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.+..
T Consensus       177 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          177 -----------TSPERLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhc
Confidence                       577889999999999999999999999999  9999999999999997654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.2e-37  Score=265.86  Aligned_cols=191  Identities=22%  Similarity=0.297  Sum_probs=169.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++||++|||||++|||+++|++|+++|++|++++++ .+..++..+++.+.  +.++.++++|++|+++++++++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999998764 55666667766654  567999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|++       +++||++||..+..     
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~-----  158 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKD-----  158 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTT-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhcc-----
Confidence            999999999999999753  3567899999999999999999999999999865       57999999976332     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               .+.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+
T Consensus       159 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          159 ---------FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             ---------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHH
T ss_pred             ---------CCCCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhh
Confidence                     1567889999999999999999999999999  99999999999999976

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-37  Score=267.13  Aligned_cols=194  Identities=29%  Similarity=0.349  Sum_probs=171.4

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ..++++||++|||||++|||+++|++|+++|++|++++++ .+..+...+++.+.  +.++.++.+|++|++++++++++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999998665 45566666666554  55789999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+...   
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~~~~---  172 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELV---  172 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGGTCC---
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhhccC---
Confidence            9999999999999999753  3567899999999999999999999999999854       579999999766542   


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++...|+++|+|+++|+++|+.|+++.|  |+||+|+||+++|++....
T Consensus       173 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~  221 (271)
T 3v2g_A          173 -----------PWPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPAD  221 (271)
T ss_dssp             -----------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSS
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCccccc
Confidence                       467889999999999999999999999999  9999999999999997653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.7e-38  Score=273.04  Aligned_cols=194  Identities=21%  Similarity=0.260  Sum_probs=167.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-------HHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.+.  +.++.++++|++|++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            67899999999999999999999999999999999999764       45556666554  5689999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          100 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~  154 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-----PNPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-----SSCEEEECCCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-----CCceEEEECChHhcC
Confidence            99999999999999999999753  35678999999999999999999999999999875     568999999987654


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-ccccCcccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH  242 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~  242 (282)
                      +.             +.++...|++||+|+++|+++++.|++++|  |+||+|+|| .++|++.+.
T Consensus       155 ~~-------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~  205 (274)
T 3e03_A          155 PA-------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINM  205 (274)
T ss_dssp             HH-------------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC-----
T ss_pred             CC-------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhh
Confidence            10             045677899999999999999999999999  999999999 699998743

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-37  Score=265.41  Aligned_cols=197  Identities=22%  Similarity=0.332  Sum_probs=172.9

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      +.+..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|++|+++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHH
Confidence            344577899999999999999999999999999999999999988888777773332 4578899999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc-ccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HRLAY  179 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~-~~~~~  179 (282)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.+ +..  
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~--  164 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEV--  164 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCC--
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcchhcc--
Confidence            99999999999999999753  35678899999999999999999999999999874     468999999977 544  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       165 -------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          165 -------------TMPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             -------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHH
T ss_pred             -------------CCCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccc
Confidence                         467788999999999999999999999999  999999999999998653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=8.7e-37  Score=262.90  Aligned_cols=193  Identities=20%  Similarity=0.230  Sum_probs=173.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+++.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            2 DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888887777654333368899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++| +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  149 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----GWGRMVYIGSVTLLR------  149 (260)
T ss_dssp             HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------
T ss_pred             HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcC------
Confidence            9998 999999999753  35678899999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++..
T Consensus       150 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          150 ---------PWQDLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             ---------CCTTBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhh
Confidence                     467788999999999999999999999988  99999999999999876

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-37  Score=265.37  Aligned_cols=192  Identities=29%  Similarity=0.354  Sum_probs=169.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++.+.  +.++.++.+|++|.++++++.+.+
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3477899999999999999999999999999999999976 4456666666554  557999999999999999995554


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                       ..++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus       102 -~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~-----  170 (273)
T 3uf0_A          102 -AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----GSGRIVTIASMLSFQ-----  170 (273)
T ss_dssp             -HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             -HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchHhcC-----
Confidence             45689999999999763  35678999999999999999999999999999886     578999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       171 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  218 (273)
T 3uf0_A          171 ----------GGRNVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAA  218 (273)
T ss_dssp             ----------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ----------CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhh
Confidence                      577889999999999999999999999999  999999999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2e-37  Score=267.23  Aligned_cols=193  Identities=28%  Similarity=0.349  Sum_probs=170.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++|++|||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999998888888765  55799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||..   .+..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||.++..      
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------  171 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-----KRGHIINISSLAGKN------  171 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCEEEEECSSCSSC------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCceEEEEechhhcC------
Confidence            999999999999973   245678999999999999999999999999999875     578999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       172 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          172 ---------PVADGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGL  220 (262)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC--------
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCccccc
Confidence                     577889999999999999999999999988  9999999999999997654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-37  Score=262.20  Aligned_cols=195  Identities=27%  Similarity=0.325  Sum_probs=172.2

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .....++|++|||||++|||+++|++|+++|++|++++ |+.....+..+++.+.  +.++.++.+|++|.+++++++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            34667899999999999999999999999999999988 7777777777776654  45789999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.++++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+..    
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~----  155 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQK----  155 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCGGG----
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcc----
Confidence            9999999999999999764  35678999999999999999999999999999986     568999999988876    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       156 -----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          156 -----------GQFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             -----------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTS
T ss_pred             -----------CCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCcccccc
Confidence                       578889999999999999999999999988  9999999999999998765

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8.7e-37  Score=262.80  Aligned_cols=195  Identities=27%  Similarity=0.307  Sum_probs=165.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998887777655     4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++++++|+||||||...   ...+.+.+++++.+++|+.+++.++++++|+|+++.. .++.++||++||..+..     
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~-----  152 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA-KGQECVILNVASTGAGR-----  152 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTTTTS-----
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCeEEEEeCchhhcC-----
Confidence            99999999999999753   2456789999999999999999999999999987631 12367899999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|+|+++|+++|+.|+++.|  |+||+|+||+++|++.+..
T Consensus       153 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          153 ----------PRPNLAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhh
Confidence                      577888999999999999999999999988  9999999999999997753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.8e-37  Score=262.31  Aligned_cols=192  Identities=26%  Similarity=0.328  Sum_probs=156.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999888888765  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC-----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          106 IQHHQLNILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.++++|+||||||+..     +..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+.    
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~----  152 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----GGGAIVNQSSTAAW----  152 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECCcccc----
Confidence            99999999999999742     24578999999999999999999999999999986     57899999997653    


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                    ++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+...
T Consensus       153 --------------~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  200 (253)
T 3qiv_A          153 --------------LYSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTTT  200 (253)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC------------
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhcC
Confidence                          3456799999999999999999999988  99999999999999877543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=4.5e-37  Score=264.95  Aligned_cols=188  Identities=19%  Similarity=0.180  Sum_probs=159.4

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+...+..++   .    .+.++.+|++|+++++++++++
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A----GAVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H----TCEEEECCTTSHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c----CCeEEECCCCCHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998765443332   2    3788999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .+.++++|+||||||.... ..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+..      
T Consensus        94 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~------  162 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-----EVADIVHISDDVTRK------  162 (260)
T ss_dssp             HHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGT------
T ss_pred             HHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcC------
Confidence            9999999999999997533 3566789999999999999999999999999875     468999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|++||+|+++|+++++.|+++ +  |+||+|+||+++|++...
T Consensus       163 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~  209 (260)
T 3gem_A          163 ---------GSSKHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDD  209 (260)
T ss_dssp             ---------CCSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC-----
T ss_pred             ---------CCCCcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCC
Confidence                     5778899999999999999999999988 6  999999999999997653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=9.4e-37  Score=267.69  Aligned_cols=195  Identities=15%  Similarity=0.157  Sum_probs=171.2

Q ss_pred             cccCCCCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      .+...++++||++|||||+|  |||+++|++|+++|++|++++|+.+..+. .+++.+..+  .+.++++|++|++++++
T Consensus        21 sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~--~~~~~~~Dv~d~~~v~~   97 (296)
T 3k31_A           21 SMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAESLG--VKLTVPCDVSDAESVDN   97 (296)
T ss_dssp             CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHHT--CCEEEECCTTCHHHHHH
T ss_pred             cccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhcC--CeEEEEcCCCCHHHHHH
Confidence            34455778999999999997  99999999999999999999999765443 344444332  46889999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcCCCC------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          100 FASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +++++.+++|++|+||||||+.      .+..+.+.++|++.+++|+.+++.++++++|+|++       .++||++||.
T Consensus        98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~isS~  170 (296)
T 3k31_A           98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILTLSYY  170 (296)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECG
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEEEEeh
Confidence            9999999999999999999975      34567899999999999999999999999999864       5899999998


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      ++..               +.+++..|++||+|+++|+++|+.|++++|  |+||+|+||+++|++....
T Consensus       171 ~~~~---------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~  223 (296)
T 3k31_A          171 GAEK---------------VVPHYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGI  223 (296)
T ss_dssp             GGTS---------------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSC
T ss_pred             hhcc---------------CCCCchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhcc
Confidence            8765               578889999999999999999999999999  9999999999999997765

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=7.3e-37  Score=264.71  Aligned_cols=198  Identities=24%  Similarity=0.285  Sum_probs=169.9

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      ...+...+++|++|||||++|||+++|++|+++|++|++++ |+.+..+...+++.+.  +.++.++.+|++|+++++++
T Consensus        16 ~~~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~   93 (269)
T 3gk3_A           16 TQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERC   93 (269)
T ss_dssp             --------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHH
T ss_pred             cCCchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            33334447899999999999999999999999999999998 5555555555555443  55799999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          101 ASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++++.+.++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+.. 
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-  167 (269)
T 3gk3_A           94 AEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----RFGRIVNIGSVNGSR-  167 (269)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEeCChhhcc-
Confidence            9999999999999999999763  35678999999999999999999999999999886     568999999988776 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       168 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          168 --------------GAFGQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             --------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-
T ss_pred             --------------CCCCcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhh
Confidence                          577889999999999999999999999998  9999999999999998754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=9.7e-37  Score=262.96  Aligned_cols=194  Identities=23%  Similarity=0.303  Sum_probs=174.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999988888777776542 3468899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  149 (263)
T 3ai3_A           81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----GGGAIIHNASICAVQ------  149 (263)
T ss_dssp             HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcC------
Confidence            99999999999999753  35678999999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|++++|  |+||+|+||+++||+...
T Consensus       150 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  197 (263)
T 3ai3_A          150 ---------PLWYEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIK  197 (263)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhh
Confidence                     467788999999999999999999999988  999999999999998653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=5.2e-37  Score=268.70  Aligned_cols=191  Identities=26%  Similarity=0.316  Sum_probs=169.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+...+...+..+.. +.++.++++|++|+++++++++++.+
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999775554444444433 45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++|++|+||||||...   ...+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+..      
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~------  188 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYE------  188 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHH------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcC------
Confidence            9999999999999753   3567799999999999999999999999999854       57999999988876      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+|+++|+++++.|++++|  |+||+|+||+++|++...
T Consensus       189 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          189 ---------GNETLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHH
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccc
Confidence                     577889999999999999999999999999  999999999999998653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.4e-37  Score=270.00  Aligned_cols=194  Identities=19%  Similarity=0.247  Sum_probs=171.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-------hHHHHHHHHHHhCCCCceeEEEccCCCHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-------AGKDVKETIVKEIPSAKVDAMELDLSSLASVR   98 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~   98 (282)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.  +.++.++++|++|+++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            46789999999999999999999999999999999999977       456666666655  568999999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438           99 NFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus        99 ~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      ++++++.+++|++|++|||||+..  +..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+.
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~  156 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-----DNPHILTLSPPIRL  156 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-----SSCEEEECCCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhc
Confidence            999999999999999999999753  36678999999999999999999999999999875     56899999998776


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-ccccCcccc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG-AIATNIIRH  242 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg-~v~t~~~~~  242 (282)
                      .+              ..++...|++||+|+++|+++|+.|++++|  |+||+|+|| .++|++.+.
T Consensus       157 ~~--------------~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~  207 (285)
T 3sc4_A          157 EP--------------KWLRPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQN  207 (285)
T ss_dssp             SG--------------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHH
T ss_pred             cC--------------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHh
Confidence            52              125678999999999999999999999999  999999999 789988654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.4e-36  Score=263.31  Aligned_cols=194  Identities=26%  Similarity=0.320  Sum_probs=169.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.. ..+...+++.+.  +.++.++.+|++|+++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            47789999999999999999999999999999999999544 444444555443  457999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.++++|+||||||+...  ..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~-----  171 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----RFGSVVNVASIIGER-----  171 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH-----
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEechhhcC-----
Confidence            9999999999999997643  4578899999999999999999999999999986     468999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|+|+++++++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       172 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          172 ----------GNMGQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC-----
T ss_pred             ----------CCCCchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhh
Confidence                      578889999999999999999999999988  9999999999999997754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-37  Score=263.14  Aligned_cols=192  Identities=23%  Similarity=0.251  Sum_probs=173.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777554  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC-C--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||.. .  +..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..      
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  149 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVK------  149 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHS------
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcc------
Confidence            999999999999975 2  35678899999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       150 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          150 ---------GPPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHH
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhh
Confidence                     467788999999999999999999999998  999999999999998653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2e-36  Score=263.08  Aligned_cols=196  Identities=28%  Similarity=0.320  Sum_probs=171.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  + ++.++.+|++|+++++++++++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988877777766432  2 68889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++.. ..+.++||++||..+..      
T Consensus       101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-~~~~g~iV~isS~~~~~------  173 (276)
T 2b4q_A          101 ELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS-AENPARVINIGSVAGIS------  173 (276)
T ss_dssp             HHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-SSSCEEEEEECCGGGTC------
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-CCCCCEEEEECCHHHcC------
Confidence            99999999999999753  3567889999999999999999999999999987521 00128999999987765      


Q ss_pred             cccCCCCCCCCCCCc-cchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFR-AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~-~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++.. .|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       174 ---------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  222 (276)
T 2b4q_A          174 ---------AMGEQAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRH  222 (276)
T ss_dssp             ---------CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHH
T ss_pred             ---------CCCCCccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhh
Confidence                     456667 999999999999999999999988  999999999999998653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.7e-38  Score=269.98  Aligned_cols=192  Identities=18%  Similarity=0.241  Sum_probs=165.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC---hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~---~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .++++||++|||||++|||+++|++|+++|++|++++|+   .+.+++..+++.+.  +.++.++++|++|+++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            467899999999999999999999999999999998765   44566666666554  5679999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+       +.++||++||..+..   
T Consensus        84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-------~~g~iv~isS~~~~~---  153 (262)
T 3ksu_A           84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-------PNGHIITIATSLLAA---  153 (262)
T ss_dssp             HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-------EEEEEEEECCCHHHH---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-------CCCEEEEEechhhcc---
Confidence            99999999999999999753  356789999999999999999999999999983       258999999988776   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                  +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++....
T Consensus       154 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~  202 (262)
T 3ksu_A          154 ------------YTGFYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQ  202 (262)
T ss_dssp             ------------HHCCCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTC
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCcccccc
Confidence                        366788999999999999999999999999  9999999999999987653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-37  Score=261.31  Aligned_cols=193  Identities=29%  Similarity=0.349  Sum_probs=172.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC--CCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv--s~~~~i~~~~~~i  104 (282)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. ..++.++.+|+  ++.++++++++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999998888887653 24567777777  9999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          105 NIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      .+.++++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..    
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~----  159 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-----EDASIAFTSSSVGRK----  159 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSEEEEEECCGGGTS----
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCeEEEEcchhhcC----
Confidence            999999999999999753   35678999999999999999999999999999875     468999999988765    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCccccCcccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKE-DGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                 +.++...|+++|+|+++|+++|+.|+.+ .|  |+||+|+||+++|++...
T Consensus       160 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~  208 (247)
T 3i1j_A          160 -----------GRANWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQ  208 (247)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHH
T ss_pred             -----------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchh
Confidence                       5778899999999999999999999976 67  999999999999998654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.6e-36  Score=259.75  Aligned_cols=188  Identities=28%  Similarity=0.367  Sum_probs=162.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. +.+++   ++.+.  +.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999997 65544   23222  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  146 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWL------  146 (249)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGS------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcc------
Confidence            99999999999999753  35678899999999999999999999999999876     468999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       147 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          147 ---------KIEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             ---------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccch
Confidence                     467888999999999999999999999988  99999999999999876

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.3e-36  Score=264.85  Aligned_cols=190  Identities=17%  Similarity=0.146  Sum_probs=163.7

Q ss_pred             CCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..  .++.++.+|++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            35899999999999  559999999999999999999999543 34445555443  25889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .+++|++|+||||||+..      +..+.+.++|++.+++|+.+++.++++++|+|++       .++||++||..+.. 
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~-  175 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEK-  175 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTS-
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhcc-
Confidence            999999999999999753      4567899999999999999999999999999864       58999999988776 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.+++..|++||+|+++|+++|+.|++++|  |+||+|+||+++|++.+..
T Consensus       176 --------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          176 --------------VMPNYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             --------------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhcc
Confidence                          577889999999999999999999999999  9999999999999997754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-36  Score=269.11  Aligned_cols=192  Identities=26%  Similarity=0.288  Sum_probs=172.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC------------hhhHHHHHHHHHHhCCCCceeEEEccCCCHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~------------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      +++||++|||||++|||+++|++|++.|++|++++|+            .+.+++..+++.+.  +.++.++.+|++|++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLA  120 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            4789999999999999999999999999999999886            55666666666554  567999999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +++++++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|.++.    .+++||++||.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~----~~g~Iv~isS~  196 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERG----QGGSVIFVSST  196 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC----SCEEEEEECCG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCCEEEEECcH
Confidence            999999999999999999999999754  356889999999999999999999999999998751    36899999998


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++...
T Consensus       197 ~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  248 (317)
T 3oec_A          197 VGLR---------------GAPGQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALN  248 (317)
T ss_dssp             GGSS---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHC
T ss_pred             HhcC---------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccc
Confidence            8776               578889999999999999999999999999  999999999999998653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.7e-36  Score=267.46  Aligned_cols=200  Identities=23%  Similarity=0.229  Sum_probs=173.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||+||||+++|++|+++|++|++++|+.+.+++..+++.....+.++.++.+|++++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999888887764444799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|++.++... ..+.|+||++||.++..      
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~------  157 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL------  157 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC------
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc------
Confidence            9999999999999753  46678999999999999999999999999999875211 12468999999988876      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|++||+|+++|+++++.|+.+.|  |+|++|+||+|+|++....
T Consensus       158 ---------~~~~~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          158 ---------AAGSPGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             ---------CCSSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC-------
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCccccc
Confidence                     577889999999999999999999999988  9999999999999997753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.2e-36  Score=261.11  Aligned_cols=195  Identities=15%  Similarity=0.141  Sum_probs=172.5

Q ss_pred             CCCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      |.++++||++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..+..++.++.+|++|+++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   79 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA   79 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence            3467899999999999  669999999999999999999998644 4445556555544579999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438          103 EYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      ++.++++++|++|||||+..      +..+.+.+++++.+++|+.+++.++++++|++++       +++||++||.++.
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~  152 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGT
T ss_pred             HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEeccccc
Confidence            99999999999999999753      3567889999999999999999999999999864       5899999998877


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      .               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+...
T Consensus       153 ~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          153 L---------------VMPNYNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             S---------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCT
T ss_pred             c---------------cCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccc
Confidence            6               578889999999999999999999999999  99999999999999987653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3.9e-36  Score=263.15  Aligned_cols=194  Identities=21%  Similarity=0.212  Sum_probs=169.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHH-----------
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-----------   95 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~-----------   95 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.+.. +.++.++++|+++++           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccccc
Confidence            57899999999999999999999999999999999 99988888888776333 457899999999999           


Q ss_pred             ------HHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCC--------------hhhHHHHHHHHHHHHHHHHHHHHHH
Q 023438           96 ------SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLDT  153 (282)
Q Consensus        96 ------~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~  153 (282)
                            +++++++++.+++|++|+||||||+..  +..+.+              .++|++.+++|+.+++.++++++|+
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  999999999999999999999999753  345667              8999999999999999999999999


Q ss_pred             HHhhhc-cCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 023438          154 MKKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHP  232 (282)
Q Consensus       154 l~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~P  232 (282)
                      |+++.. ..+..++||++||..+..               +.++...|+++|+++++|+++|+.|+++.|  |+||+|+|
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~P  227 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGP  227 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEE
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcC---------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEee
Confidence            987511 001158999999988765               577889999999999999999999999999  99999999


Q ss_pred             CccccCc
Q 023438          233 GAIATNI  239 (282)
Q Consensus       233 g~v~t~~  239 (282)
                      |+++|++
T Consensus       228 G~v~T~~  234 (291)
T 1e7w_A          228 GLSVLVD  234 (291)
T ss_dssp             SSBCCGG
T ss_pred             CCccCCc
Confidence            9999999

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.3e-36  Score=261.73  Aligned_cols=191  Identities=29%  Similarity=0.389  Sum_probs=172.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999998888877777654  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHH--HHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.  |+++     +.++||++||..+..      
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----~~g~iv~isS~~~~~------  165 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQ------  165 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----TEEEEEEECCGGGTS------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----CCeEEEEECcccccc------
Confidence            999999999999753  3567889999999999999999999999999  8875     458999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       166 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  213 (277)
T 2rhc_B          166 ---------GVVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAAS  213 (277)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHH
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhh
Confidence                     467788999999999999999999999988  999999999999998653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-36  Score=256.38  Aligned_cols=186  Identities=24%  Similarity=0.311  Sum_probs=165.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++       .+.++.+|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987665544332       2788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.+ ..        
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~-~~--------  140 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASRV-YL--------  140 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCGG-GG--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEccch-hc--------
Confidence            999999999999753  35678899999999999999999999999999874     468999999976 54        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       141 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  189 (245)
T 1uls_A          141 -------GNLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKV  189 (245)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSS
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhhc
Confidence                   467788999999999999999999999998  9999999999999987643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.3e-36  Score=260.25  Aligned_cols=191  Identities=31%  Similarity=0.333  Sum_probs=167.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+. +++..+++.+.+ +.++.++.+|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999999887 777777765532 346889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  147 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLV--------  147 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECcHHhCc--------
Confidence            999999999999753  35678899999999999999999999999999875     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       148 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (260)
T 1x1t_A          148 -------ASANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC-----
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHH
Confidence                   467788999999999999999999999998  999999999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.9e-36  Score=262.66  Aligned_cols=187  Identities=19%  Similarity=0.223  Sum_probs=163.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988776655443     45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC---C----CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT---P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~---~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++++|+||||||+...   .    .+.+.++|++.+++|+.+++.++++++|+|.++      +++||++||..+..  
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~--  147 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFY--  147 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTS--
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhcc--
Confidence            99999999999997532   1    234456799999999999999999999999874      58999999988776  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|++||+|+++|+++|+.|+++.   ||||+|+||+++|++...
T Consensus       148 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          148 -------------PNGGGPLYTATKHAVVGLVRQMAFELAPH---VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             -------------SSSSCHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSSCC--CCC
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHhcCC---CEEEEEECCcCcCCcccc
Confidence                         57788899999999999999999999873   999999999999998754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-36  Score=257.46  Aligned_cols=188  Identities=27%  Similarity=0.329  Sum_probs=170.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999998888877777654  457889999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCccccC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     + .++||++||..+..          
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~----------  144 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE-----GHGGKIINACSQAGHV----------  144 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSCEEEEEECCGGGTS----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCCEEEEECchhhcC----------
Confidence            999999999753  35678899999999999999999999999999875     3 58999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       145 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  192 (256)
T 1geg_A          145 -----GNPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAE  192 (256)
T ss_dssp             -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHH
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhhh
Confidence                 467788999999999999999999999988  999999999999998653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-36  Score=256.80  Aligned_cols=183  Identities=24%  Similarity=0.295  Sum_probs=165.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ||++|||||++|||+++|++|+++|  +.|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999985  68999999988877766655     4478999999999999999999999999


Q ss_pred             CCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          109 HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      |++|+||||||..   .+..+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||..+..        
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~--------  142 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNM--------  142 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCC--------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhcc--------
Confidence            9999999999974   346678999999999999999999999999999885      48999999988765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++...|++||+|+++|+++|+.|+  .|  |+||+|+||+++|++.+..
T Consensus       143 -------~~~~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          143 -------YFSSWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             -------SSCCSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCC
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHh
Confidence                   57888999999999999999999998  46  9999999999999998754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.1e-36  Score=262.37  Aligned_cols=191  Identities=26%  Similarity=0.252  Sum_probs=164.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++||++|||||++|||+++|++|+++|++|+++ +|+.+..+...+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998 66677777777777554  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++|++|+||||||..   .+..+.+.++|++.+++|+.++++++++++|+|++       +++||++||..+...    
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~----  150 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDG----  150 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHC----
T ss_pred             HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccC----
Confidence            9999999999999965   33668899999999999999999999999999864       479999999877621    


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|++||+|+++|+++++.|+++.   |+||+|+||+++|++.+..
T Consensus       151 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~---I~vn~v~PG~v~T~~~~~~  198 (259)
T 3edm_A          151 ----------GGPGALAYATSKGAVMTFTRGLAKEVGPK---IRVNAVCPGMISTTFHDTF  198 (259)
T ss_dssp             ----------CSTTCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCC------
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCcCcccccc
Confidence                      56788899999999999999999999863   9999999999999997754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.9e-36  Score=258.17  Aligned_cols=191  Identities=26%  Similarity=0.296  Sum_probs=172.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777654  45788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~------  156 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-----GGGSVLIVSSVGAYH------  156 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEechhhcC------
Confidence            9999999999999743   35678899999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       157 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          157 ---------PFPNLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTH
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccch
Confidence                     567788999999999999999999999988  99999999999999865

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-36  Score=263.38  Aligned_cols=192  Identities=27%  Similarity=0.319  Sum_probs=172.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCC---ceeEEEccCCCHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~---~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.   ++.++.+|++|++++++++++
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888887777654  33   688999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--C--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          104 YNIQHHQLNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +.+++|++|+||||||...  +  ..+.+.++|++.+++|+.+++.++++++|+|+++      +++||++||..+..  
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~IV~isS~~~~~--  171 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT------KGEIVNVSSIVAGP--  171 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGSS--
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc------CCEEEEEcCchhcc--
Confidence            9999999999999999753  2  4578899999999999999999999999999874      38999999987765  


Q ss_pred             cCCccccCCCCCCCC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +. ++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++....
T Consensus       172 -------------~~~~~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~  221 (297)
T 1xhl_A          172 -------------QAHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAM  221 (297)
T ss_dssp             -------------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHT
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCcccccc
Confidence                         34 6788999999999999999999999999  9999999999999986643

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-36  Score=260.12  Aligned_cols=191  Identities=25%  Similarity=0.260  Sum_probs=171.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCC---ceeEEEccCCCHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~---~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.   ++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888877777553  33   6899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .++++++|+||||||....      ..+.+.++|++.+++|+.+++.++++++|+|.++      +++||++||..+.. 
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~-  153 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGP-  153 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSS-
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccC-
Confidence            9999999999999997532      4567889999999999999999999999999875      38999999987765 


Q ss_pred             ccCCccccCCCCCCCC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +. ++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++....
T Consensus       154 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  203 (280)
T 1xkq_A          154 --------------QAQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAM  203 (280)
T ss_dssp             --------------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHT
T ss_pred             --------------CCCCcccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCccccc
Confidence                          34 6788999999999999999999999999  9999999999999986643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-36  Score=257.79  Aligned_cols=196  Identities=22%  Similarity=0.313  Sum_probs=167.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++.+|+++||||++|||+++|++|+++|++|++++|+.....+..++..+.. +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            355678999999999999999999999999999999887665555444443333 3579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCC--C--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc-cccc
Q 023438          106 IQHHQLNILINNAGI--M--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYH  180 (282)
Q Consensus       106 ~~~g~id~vi~~ag~--~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~-~~~~  180 (282)
                      ++++++|+||||||.  .  .+..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||.... .   
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~---  152 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----NFGRIINYGFQGADSA---  152 (264)
T ss_dssp             HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTTGGGC---
T ss_pred             HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCeEEEEeechhccc---
Confidence            999999999999994  3  235678999999999999999999999999999886     56899999997332 2   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 .+.++...|+++|+|+++|+++|+.|+++.|  |+||+|+||+++|++.+..
T Consensus       153 -----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  202 (264)
T 3i4f_A          153 -----------PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEAT  202 (264)
T ss_dssp             -----------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCC
T ss_pred             -----------CCCCCCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhc
Confidence                       1567788999999999999999999999999  9999999999999998764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3e-36  Score=260.98  Aligned_cols=185  Identities=25%  Similarity=0.301  Sum_probs=163.2

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .....+++||++|||||++|||+++|++|+++|++|++++|+.+..            ...+..+++|++|+++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~   73 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVE   73 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHH
Confidence            3445778999999999999999999999999999999999986543            1246788999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..   
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~---  145 (269)
T 3vtz_A           74 KTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----GHGSIINIASVQSYA---  145 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhcc---
Confidence            99999999999999999753  35678999999999999999999999999999886     578999999988776   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|++||+|+++|+++++.|+++ +  |+||+|+||+++|++...
T Consensus       146 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          146 ------------ATKNAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             ------------BCTTCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHH
T ss_pred             ------------CCCCChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhh
Confidence                        5778899999999999999999999987 7  999999999999998653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=272.53  Aligned_cols=195  Identities=21%  Similarity=0.262  Sum_probs=171.4

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-------HHHHHHHHHHhCCCCceeEEEccCCCHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i   97 (282)
                      ...+++||++|||||++|||+++|++|++.|++|++++|+.+.       +.+..+++.+.  +.++.++.+|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            4467899999999999999999999999999999999999774       45566666554  56799999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438           98 RNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus        98 ~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +++++++.+++|++|+||||||+..  +..+.+.++|++++++|+.++++++++++|+|+++     +.++||++||..+
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~~~  191 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-----KVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----SSCEEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----CCCEEEEECCHHH
Confidence            9999999999999999999999753  46778999999999999999999999999999875     5689999999876


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc-cccCcccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGA-IATNIIRH  242 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~-v~t~~~~~  242 (282)
                      ..+             .+.++...|++||+++++|+++|+.|++ .|  |+||+|+||. ++|++.+.
T Consensus       192 ~~~-------------~~~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~~  243 (346)
T 3kvo_A          192 LNP-------------VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMDM  243 (346)
T ss_dssp             CCG-------------GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHHH
T ss_pred             cCC-------------CCCCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHHh
Confidence            541             0156788999999999999999999999 88  9999999995 99987653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=8e-36  Score=260.65  Aligned_cols=200  Identities=24%  Similarity=0.231  Sum_probs=165.4

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCC----HHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSS----LAS   96 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~----~~~   96 (282)
                      ......++++|++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+.. +.++.++.+|++|    +++
T Consensus        14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             --------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHH
T ss_pred             cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHH
Confidence            33445678999999999999999999999999999999999998 77777777775333 4578999999999    999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCCCCC--C-----Cc-----CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCC
Q 023438           97 VRNFASEYNIQHHQLNILINNAGIMGT--P-----FM-----LSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGG  163 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~~~~--~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-~~~~  163 (282)
                      ++++++++.+.++++|+||||||+...  .     .+     .+.++|++.+++|+.+++.++++++|+++++.. ....
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            999999999999999999999997532  3     45     678899999999999999999999999987411 0011


Q ss_pred             CCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          164 EGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       164 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .++||++||..+..               +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++
T Consensus       173 ~g~iv~isS~~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQ---------------PCMAFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV  231 (288)
T ss_dssp             CEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT
T ss_pred             CeEEEEEecccccC---------------CCCCCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc
Confidence            57999999987765               577888999999999999999999999988  999999999999998

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=8e-36  Score=257.05  Aligned_cols=188  Identities=27%  Similarity=0.354  Sum_probs=168.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.     ..+.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887766655542     2488899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..       
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-------  145 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLA-------  145 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEeehhhcC-------
Confidence            9999999999999753  35678899999999999999999999999999876     468999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++..
T Consensus       146 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          146 --------GTVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGT
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccc
Confidence                    467788999999999999999999999988  99999999999999865

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.6e-36  Score=258.33  Aligned_cols=188  Identities=27%  Similarity=0.302  Sum_probs=168.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999987766655444     346889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  143 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLM--------  143 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhcc--------
Confidence            999999999999753  35578899999999999999999999999999886     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       144 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          144 -------GLALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccc
Confidence                   467788999999999999999999999988  999999999999998653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.5e-36  Score=258.19  Aligned_cols=188  Identities=23%  Similarity=0.326  Sum_probs=169.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh--HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.  +++..+++.+.  +.++.++.+|++|+++++++++++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999877  77777666543  4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-CeEEEEcCCcccccccCCccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +. ++||++||..+..        
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~--------  146 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----GVKGKIINAASIAAIQ--------  146 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCCEEEEECCGGGTS--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCcEEEEECcchhcc--------
Confidence            99999999999753  35578999999999999999999999999999875     34 8999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       147 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          147 -------GFPILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhh
Confidence                   567788999999999999999999999988  999999999999998653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.9e-36  Score=260.41  Aligned_cols=192  Identities=24%  Similarity=0.246  Sum_probs=157.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.   ..+++     +.++.++++|++|+++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999996543   22222     4578999999999999999999887


Q ss_pred             hcCCCccEEEEcCCCCCC------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCeEEEEcCCccc
Q 023438          106 IQHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHR  176 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~---~~~~g~iv~vsS~~~~  176 (282)
                      + ++++|+||||||....      ..+.+.++|++.+++|+.+++.++++++|+|.+....   ..+.++||++||..+.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 8999999999997532      2347899999999999999999999999999873110   0246899999998876


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+..
T Consensus       155 ~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  204 (257)
T 3tl3_A          155 D---------------GQIGQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASL  204 (257)
T ss_dssp             C---------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---
T ss_pred             C---------------CCCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhc
Confidence            5               466788999999999999999999999999  9999999999999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.7e-36  Score=264.56  Aligned_cols=189  Identities=26%  Similarity=0.255  Sum_probs=166.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  ...+...+.+.+.  +.++.++.+|++|+++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999999873  3344444444433  457899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          105 NIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      .++++++|+||||||...   +..+.+.++|++.+++|+.++++++++++|++++       +++||++||..+..    
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~----  191 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQ----  191 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTS----
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhcc----
Confidence            999999999999999743   3567899999999999999999999999999854       58999999988776    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                 +.++...|+++|+|+++|+++|+.|+++.|  |+||+|+||+++|++..
T Consensus       192 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~  238 (294)
T 3r3s_A          192 -----------PSPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQI  238 (294)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHH
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCcccccc
Confidence                       578889999999999999999999999999  99999999999999843

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.9e-35  Score=257.17  Aligned_cols=188  Identities=29%  Similarity=0.397  Sum_probs=169.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999988877665543     347899999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||..  .+..+.+.+++++.+++|+.+++.++++++|+++++     +.++||++||..+..        
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~--------  143 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQL--------  143 (281)
T ss_dssp             HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC--------
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccC--------
Confidence            99999999999975  346678999999999999999999999999999986     568999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|++||+++++++++++.|++++|  |+||+|+||+++|++...
T Consensus       144 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          144 -------SFAGFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCC
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccc
Confidence                   577889999999999999999999999998  999999999999999664

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.3e-35  Score=256.44  Aligned_cols=199  Identities=27%  Similarity=0.318  Sum_probs=171.2

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEE-EEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii-~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      ++....++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++.+.  +.++.++.+|++|+++++++
T Consensus        17 n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           17 NLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             --------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHH
T ss_pred             hhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            333445678999999999999999999999999999866 457777788888877765  45799999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          101 ASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++++.+.++++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++.+.+..    +.++||++||.++.. 
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~-  169 (267)
T 4iiu_A           95 LEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR----QGGRIITLSSVSGVM-  169 (267)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCHHHHH-
T ss_pred             HHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEEcchHhcc-
Confidence            99999999999999999997643  45789999999999999999999999999987431    468999999988876 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       170 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          170 --------------GNRGQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCC
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCccccc
Confidence                          577889999999999999999999999988  9999999999999998754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=5.4e-36  Score=256.40  Aligned_cols=183  Identities=23%  Similarity=0.368  Sum_probs=161.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999988777666555     2468899999999999999999999999999


Q ss_pred             cEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          112 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       112 d~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |+||||||+.   .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..           
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~-----------  139 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSW-----------  139 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-----------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEccchhcc-----------
Confidence            9999999975   235678899999999999999999999999999875     468999999987765           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-cCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~  241 (282)
                          +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++ |++..
T Consensus       140 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          140 ----PYAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC-----
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchh
Confidence                567788999999999999999999999998  999999999999 99864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5.4e-36  Score=257.74  Aligned_cols=194  Identities=24%  Similarity=0.281  Sum_probs=170.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHH---cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~---~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .++++|++|||||++|||+++|++|++   .|++|++++|+.+.+++..+++.+.+++.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   89999999999999888888887765556799999999999999999999


Q ss_pred             HHh--cCCCcc--EEEEcCCCCC----CCCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          104 YNI--QHHQLN--ILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       104 i~~--~~g~id--~vi~~ag~~~----~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +.+  .+|++|  +||||||+..    +..+ .+.++|++.+++|+.+++.++++++|+|+++.   ++.++||++||..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~  158 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC  158 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGG
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCch
Confidence            988  678888  9999999753    2445 68899999999999999999999999997520   0247999999988


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..               +.++...|++||+|+++|+++++.|+.  +  |+||+|+||+++|++.+.
T Consensus       159 ~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~  207 (259)
T 1oaa_A          159 ALQ---------------PYKGWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             GTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHH
T ss_pred             hcC---------------CCCCccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHH
Confidence            765               577889999999999999999999996  3  999999999999998653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-35  Score=261.71  Aligned_cols=191  Identities=25%  Similarity=0.286  Sum_probs=161.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-----hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-----~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      |.|++|++|||||++|||+++|++|++.|++|++++|+     .+.++...+.+.+.  +.++.++.+|++|++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHH
Confidence            35678999999999999999999999999999988876     34444544444443  457999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          102 SEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++.+++|++|+||||||+.  .+..+.+.+++++++++|+.+++.++++++|+|+++     +.++||++||.++... 
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----~~g~iV~isS~~~~~~-  152 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----KHGLLIWISSSSSAGG-  152 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC-
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEecchhccC-
Confidence            99999999999999999975  346678999999999999999999999999999986     5789999999877642 


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                                   +.++...|++||+|+++++++++.|+++.|  |+||+|+||.++|++.
T Consensus       153 -------------~~~~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          153 -------------TPPYLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -------------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC-----
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCch
Confidence                         346678899999999999999999999999  9999999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.9e-36  Score=260.72  Aligned_cols=182  Identities=25%  Similarity=0.275  Sum_probs=162.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -++++||++|||||++|||+++|++|+++|++|++++|+.+..             .....+.+|+++.++++.+++++.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-------------CCSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------HhhhccCcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999986542             122445799999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~------  158 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----GGGAIVNVASCWGLR------  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTB------
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCC------
Confidence            99999999999999754  35678999999999999999999999999999986     578999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       159 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          159 ---------PGPGHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHH
T ss_pred             ---------CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhh
Confidence                     578889999999999999999999999999  999999999999998654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.9e-35  Score=250.63  Aligned_cols=189  Identities=23%  Similarity=0.296  Sum_probs=167.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++++|++|+++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999999999988888886443 46799999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|.+.      ++++|+++|..+..          
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~----------  143 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSAR----------  143 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSS----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhcc----------
Confidence            9999999999753  36678999999999999999999999999999653      67899999977665          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                           +.++...|+++|+++++|+++++  +...|  |+||+|+||+++|++.+...
T Consensus       144 -----~~~~~~~Y~~sKaa~~~~~~~l~--~~~~~--i~v~~v~PG~v~T~~~~~~~  191 (235)
T 3l77_A          144 -----LIPYGGGYVSTKWAARALVRTFQ--IENPD--VRFFELRPGAVDTYFGGSKP  191 (235)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHH--HHCTT--SEEEEEEECSBSSSTTTCCS
T ss_pred             -----cCCCcchHHHHHHHHHHHHHHHh--hcCCC--eEEEEEeCCccccccccccC
Confidence                 46778899999999999999994  44567  99999999999999987653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-36  Score=264.47  Aligned_cols=201  Identities=20%  Similarity=0.189  Sum_probs=170.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC------------hhhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~------------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++|+
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCH
Confidence            35889999999999999999999999999999999998            66666666666554  56799999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      ++++++++++.++++++|+||||||+.....+.+.++|++.+++|+.+++.++++++|+|.       ++++||++||..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~  156 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT-------SGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-------TTCEEEEECCHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-------cCcEEEEeccch
Confidence            9999999999999999999999999865444578999999999999999999999999983       368999999987


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..+...    .+.....+.++...|+++|+++++|+++++.|++++|  |+||+|+||+++|++.+.
T Consensus       157 ~~~~~~~----~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          157 GLIAAAQ----PPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHHHHHC----CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSS
T ss_pred             hcccccc----cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccc
Confidence            7653211    0111122336678899999999999999999999998  999999999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.9e-36  Score=267.61  Aligned_cols=197  Identities=24%  Similarity=0.257  Sum_probs=174.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC----------hhhHHHHHHHHHHhCCCCceeEEEccCCCHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD----------IAAGKDVKETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~----------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      .+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.  +.++.++.+|++|+++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQ  100 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHH
Confidence            35789999999999999999999999999999999998          67777777777665  4578999999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCC
Q 023438           97 VRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSE  173 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~  173 (282)
                      ++++++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.+++.+++++++++.+.... ....++||++||.
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            99999999999999999999999764  35678999999999999999999999999999875321 1224799999998


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .+..               +.++...|++||+|+++|+++++.|+++.|  |+||+|+|| +.|++....
T Consensus       181 ~~~~---------------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~  232 (322)
T 3qlj_A          181 AGLQ---------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETV  232 (322)
T ss_dssp             HHHH---------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCS
T ss_pred             HHcc---------------CCCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhh
Confidence            8876               577889999999999999999999999999  999999999 999987654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=256.75  Aligned_cols=193  Identities=16%  Similarity=0.150  Sum_probs=165.7

Q ss_pred             CCCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ...++++|++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.++  ++.++.+|++|+++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHH
Confidence            4577899999999998  99999999999999999999999954 4555666666643  58899999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC------CCCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          103 EYNIQHHQLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~------~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      ++.++++++|+||||||+..      ...+ .+.+++++.+++|+.+++.++++++|+|++       .++||++||.++
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~  157 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGA  157 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECGGG
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEecccc
Confidence            99999999999999999753      3344 889999999999999999999999998864       479999999887


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      ..               +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+...
T Consensus       158 ~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  209 (271)
T 3ek2_A          158 ER---------------AIPNYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIK  209 (271)
T ss_dssp             TS---------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCH
T ss_pred             cc---------------CCCCccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhccc
Confidence            65               577889999999999999999999999999  99999999999999987653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2.3e-35  Score=256.71  Aligned_cols=198  Identities=21%  Similarity=0.263  Sum_probs=171.4

Q ss_pred             ccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        23 ~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      +...++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~   96 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIE   96 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHH
Confidence            33346789999999999999999999999999999999999998887777766     4579999999999999999999


Q ss_pred             HHHhcCCCccEEEEc-CCCCCC--C-----CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCC
Q 023438          103 EYNIQHHQLNILINN-AGIMGT--P-----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSE  173 (282)
Q Consensus       103 ~i~~~~g~id~vi~~-ag~~~~--~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~  173 (282)
                      .+ ++++++|++||| ||....  .     .+.+.++|++.+++|+.+++.+++++++.+.+.... .+++++||++||.
T Consensus        97 ~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           97 AA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            99 788999999999 554321  1     357889999999999999999999999999873221 1246899999998


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .+..               +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+..
T Consensus       176 ~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          176 AGYE---------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             GGTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTT
T ss_pred             cccC---------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcc
Confidence            8776               577889999999999999999999999999  9999999999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-35  Score=261.42  Aligned_cols=193  Identities=21%  Similarity=0.214  Sum_probs=168.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHH------------
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA------------   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~------------   95 (282)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.+.. +.++.++.+|++|++            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccccc
Confidence            7899999999999999999999999999999999 99988888887776343 457899999999999            


Q ss_pred             -----HHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCC--------------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 023438           96 -----SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLDTM  154 (282)
Q Consensus        96 -----~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~l  154 (282)
                           +++++++++.+.++++|+||||||+..  +..+.+              .++|++.+++|+.+++.++++++|+|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999753  345666              88999999999999999999999999


Q ss_pred             Hhhhc-cCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 023438          155 KKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPG  233 (282)
Q Consensus       155 ~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg  233 (282)
                      .++.. ..+..++||++||..+..               +.++...|+++|+++++|++.|+.|+++.|  |+||+|+||
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG  265 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPG  265 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEES
T ss_pred             HhcCCcCCCCCcEEEEECchhhcc---------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecC
Confidence            87510 011158999999987765               577889999999999999999999999998  999999999


Q ss_pred             ccccCc
Q 023438          234 AIATNI  239 (282)
Q Consensus       234 ~v~t~~  239 (282)
                      +++|++
T Consensus       266 ~v~T~~  271 (328)
T 2qhx_A          266 LSVLVD  271 (328)
T ss_dssp             SBSCCC
T ss_pred             cccCCc
Confidence            999999

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-35  Score=256.48  Aligned_cols=193  Identities=28%  Similarity=0.360  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++|++|||||++|||+++|++|++.|++|+++ +|+.+..+...+++.+.  +.++.++.+|++|.++++++++++.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999999876 78877777777777654  4579999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          109 HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +++|+||||||+..   +..+.+.+++++.+++|+.+++.++++++|.|.+...  ++.++||++||.++..+       
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~-------  173 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS--GQGGAIVNVSSMAAILG-------  173 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc--CCCCEEEEEcchHhccC-------
Confidence            99999999999753   3567799999999999999999999999999986421  23689999999888763       


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             ..+++..|++||+|+++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       174 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          174 -------SATQYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             -------CTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------
T ss_pred             -------CCCCcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccc
Confidence                   233667899999999999999999999998  999999999999998765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=8.9e-36  Score=255.87  Aligned_cols=188  Identities=28%  Similarity=0.328  Sum_probs=167.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876  4445555433  456888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  143 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-----NWGRIINIASVHGLV--------  143 (255)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcCchhcc--------
Confidence            999999999999753  34577899999999999999999999999999875     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                             +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++||+..
T Consensus       144 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  190 (255)
T 2q2v_A          144 -------GSTGKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQ  190 (255)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchh
Confidence                   467788999999999999999999999988  99999999999999865

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-35  Score=255.65  Aligned_cols=192  Identities=26%  Similarity=0.304  Sum_probs=164.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHh-CCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+. ..+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999988888777776321 1134688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcC----ChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc-cccc
Q 023438          107 QHHQLNILINNAGIMG--TPFML----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~-~~~~  179 (282)
                      ++|++|+||||||...  +..+.    +.++|++.+++|+.+++.++++++|+|+++      +++||++||..+ ..  
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--  154 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH--  154 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS--
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEeccccccc--
Confidence            9999999999999753  24455    889999999999999999999999999875      489999999876 54  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       155 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          155 -------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             -------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC---
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccc
Confidence                         467788999999999999999999999988  999999999999998654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.6e-35  Score=255.70  Aligned_cols=196  Identities=23%  Similarity=0.272  Sum_probs=172.3

Q ss_pred             CCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhH-HHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        26 ~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~-~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+.... ++..+++.+.+ +.++.++++|++|+++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHH
Confidence            367899999999999  9999999999999999999999887665 66677776554 4579999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++.++++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..+  
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~--  166 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----GTGSLVITASMSGHIA--  166 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSC--
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----CCceEEEEcccccccc--
Confidence            99999999999999999754  35678999999999999999999999999999986     5789999999877652  


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 ...++...|+++|+|+++|+++++.|+++.   |+||+|+||+++|++.+..
T Consensus       167 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          167 -----------NFPQEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             -----------CSSSCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGS
T ss_pred             -----------CCCCCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhC
Confidence                       011467899999999999999999999764   8999999999999998754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.9e-35  Score=256.17  Aligned_cols=190  Identities=16%  Similarity=0.177  Sum_probs=169.6

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+.  ..+..+++.+..+  ++.++.+|++|+++++++++++.
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHH
Confidence            4789999999988  7799999999999999999999987  4556666666643  58899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC------CCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          106 IQHHQLNILINNAGIMGT------PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~------~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      +.++++|+||||||+...      ..+ .+.+++++.+++|+.+++.++++++|++.++      .++||++||.++.. 
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-  171 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR------NASMVALTYIGAEK-  171 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------TCEEEEEECGGGTS-
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCeEEEEecccccc-
Confidence            999999999999997532      233 7899999999999999999999999999863      68999999988776 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                    +.+++..|+++|+|+++|+++++.|++++|  |+||+|+||+++|++.+...
T Consensus       172 --------------~~~~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          172 --------------AMPSYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             --------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCSGGGGCT
T ss_pred             --------------CCCCchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccchhhhcCc
Confidence                          578889999999999999999999999999  99999999999999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.1e-35  Score=254.60  Aligned_cols=190  Identities=28%  Similarity=0.362  Sum_probs=168.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     ..++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999987765554433     1257889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++|++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|.++     + .++||++||..+..     
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~-----  151 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS-----NTKGVIVNTASLAAKV-----  151 (263)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCCEEEEECCGGGTS-----
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEEeccccccc-----
Confidence            99999999999999753  35678899999999999999999999999999875     3 58999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       152 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  199 (263)
T 3ak4_A          152 ----------GAPLLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQER  199 (263)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHH
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhh
Confidence                      467788999999999999999999999988  999999999999998653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=255.01  Aligned_cols=190  Identities=23%  Similarity=0.284  Sum_probs=167.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++.+.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999999998888888777665  457899999999999999999999876


Q ss_pred             -CCCccEEEEcCC--CC-------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          108 -HHQLNILINNAG--IM-------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       108 -~g~id~vi~~ag--~~-------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                       +|++|+||||||  +.       .+..+.+.++|++.+++|+.+++.++++++|+|.++     +.++||++||..+..
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~  154 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-----GQGLIVVISSPGSLQ  154 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-----TCCEEEEECCGGGTS
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-----CCcEEEEEcChhhcC
Confidence             899999999995  32       345678889999999999999999999999999875     468999999977653


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                      .++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       155 ----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  201 (260)
T 2qq5_A          155 ----------------YMFNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKE  201 (260)
T ss_dssp             ----------------CCSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC--
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHH
Confidence                            22457899999999999999999999998  999999999999999754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.5e-36  Score=258.92  Aligned_cols=189  Identities=25%  Similarity=0.309  Sum_probs=164.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+|+ |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.   .++.++.+|++|+++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4456 99999999999999999999999999999999988877777666432   3688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-eEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g-~iv~vsS~~~~~~~~~~  182 (282)
                      .++++|+||||||+.   .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.+ +||++||..+..     
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~~IV~isS~~~~~-----  163 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----GAGASIVNLGSVAGKW-----  163 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGTS-----
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcEEEEeCCchhcc-----
Confidence            999999999999974   335678899999999999999999999999999876     457 999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++..
T Consensus       164 ----------~~~~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~  210 (272)
T 2nwq_A          164 ----------PYPGSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSL  210 (272)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC-----
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchh
Confidence                      567788999999999999999999999999  99999999999999865

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-35  Score=250.54  Aligned_cols=190  Identities=28%  Similarity=0.377  Sum_probs=154.3

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     ..++.++.+|+++.+++++++++
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh
Confidence            4457889999999999999999999999999999999999988877776665     34688999999999999888765


Q ss_pred             HHhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +    +++|++|||||....  ..+.+.+++++.+++|+.+++.++++++|+|.++     +.++||++||..+..    
T Consensus        82 ~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~----  148 (249)
T 3f9i_A           82 T----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-----RYGRIINISSIVGIA----  148 (249)
T ss_dssp             C----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCC------
T ss_pred             c----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcEEEEEccHHhcc----
Confidence            3    689999999997543  4567889999999999999999999999999876     568999999988776    


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                 +.++...|+++|+|+++++++++.|++++|  |+||+|+||+++|++.+...
T Consensus       149 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  198 (249)
T 3f9i_A          149 -----------GNPGQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKLN  198 (249)
T ss_dssp             -----------CCSCSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------CC
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCcccccC
Confidence                       577889999999999999999999999998  99999999999999987653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-35  Score=256.00  Aligned_cols=185  Identities=22%  Similarity=0.279  Sum_probs=163.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+...           ..++.++.+|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5578999999999999999999999999999999999865421           23688999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+...      
T Consensus        93 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~------  161 (260)
T 3un1_A           93 RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-----GSGHIVSITTSLVDQP------  161 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCTTTTSC------
T ss_pred             HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhccC------
Confidence            9999999999999753  35678999999999999999999999999999885     5689999999765421      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             .+..+...|++||+|+++|+++++.|+++.|  |+||+|+||+++||+...
T Consensus       162 -------~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          162 -------MVGMPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             -------BTTCCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCG
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCH
Confidence                   1334567899999999999999999999999  999999999999998764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-35  Score=254.54  Aligned_cols=187  Identities=28%  Similarity=0.336  Sum_probs=168.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++.+.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988777666555     346889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     + ++||++||..+..        
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~--------  143 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-----G-GSIINMASVSSWL--------  143 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----C-EEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-----C-CEEEEEcchhhcC--------
Confidence            999999999999753  35678899999999999999999999999999874     3 8999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~--g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++|+++++.|+++.  |  |+||+|+||+++||+...
T Consensus       144 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          144 -------PIEQYAGYSASKAAVSALTRAAALSCRKQGYA--IRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESEECCHHHHH
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCC--eEEEEEEeCCccCchhhh
Confidence                   56788899999999999999999999988  7  999999999999998653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.4e-34  Score=248.50  Aligned_cols=191  Identities=26%  Similarity=0.268  Sum_probs=171.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.++...+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988887777777654  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++++|+||||||...   +..+.+.+++++.+++|+.+++.++++++++|.++     +.++||++||..+..      
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~------  155 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----KQGVIVAIGSMSGLI------  155 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEecchhcc------
Confidence            9999999999999754   35677889999999999999999999999999875     468999999987654      


Q ss_pred             cccCCCCCCCCCCC--ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGF--RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++.  ..|+++|++++.++++++.|+++.|  |+|++|+||+++|++.+
T Consensus       156 ---------~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          156 ---------VNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTR  204 (260)
T ss_dssp             ---------CCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTH
T ss_pred             ---------cCCCCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhh
Confidence                     23444  7899999999999999999999888  99999999999999876

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-35  Score=252.49  Aligned_cols=184  Identities=28%  Similarity=0.319  Sum_probs=164.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+. ++..+++     . . .++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999876 5544443     1 3 78899999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~--------  141 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLF--------  141 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccccccC--------
Confidence            999999999999753  35678899999999999999999999999999875     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                             +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++..
T Consensus       142 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~  188 (256)
T 2d1y_A          142 -------AEQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVL  188 (256)
T ss_dssp             -------BCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHH
T ss_pred             -------CCCCChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhh
Confidence                   467788999999999999999999999988  99999999999999854

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=8.2e-35  Score=251.02  Aligned_cols=195  Identities=26%  Similarity=0.257  Sum_probs=161.3

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .+.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|+++.+++++++++
T Consensus         7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   84 (266)
T 1xq1_A            7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQT   84 (266)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHH
Confidence            3457789999999999999999999999999999999999998888877777654  45788999999999999999999


Q ss_pred             HHhcC-CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          104 YNIQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       104 i~~~~-g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      +.+.+ +++|+||||||...  +..+.+.+++++.+++|+.+++.++++++|+|++.     +.++||++||..+..   
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~---  156 (266)
T 1xq1_A           85 VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVV---  156 (266)
T ss_dssp             HHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC---------
T ss_pred             HHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccchhcc---
Confidence            99888 89999999999753  35677899999999999999999999999999875     468999999987765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                  +.++...|+++|++++.++++++.|+++.|  |+|++|+||+++|++.+.
T Consensus       157 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  204 (266)
T 1xq1_A          157 ------------SASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEA  204 (266)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC------
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhh
Confidence                        466778999999999999999999999888  999999999999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.6e-36  Score=261.55  Aligned_cols=197  Identities=45%  Similarity=0.652  Sum_probs=166.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++ 
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc-
Confidence            35789999999999999999999999999999999999988776665544     457999999999999999998876 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                         +++|+||||||+..+..+.+.+++++.+++|+.+++.++++++|++.+         +||++||.++..+.   ..+
T Consensus        85 ---~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------riv~isS~~~~~~~---~~~  149 (291)
T 3rd5_A           85 ---SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------RVVTVSSMAHWPGR---INL  149 (291)
T ss_dssp             ---CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------EEEEECCGGGTTCC---CCS
T ss_pred             ---CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------heeEeechhhccCC---CCc
Confidence               689999999998766677889999999999999999999999999853         89999998876532   122


Q ss_pred             cCCC-CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKIN-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~-~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      ++.. +..+.++...|++||+|+++|++.++.|+++.|.+|+||+|+||+++|++.+..
T Consensus       150 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          150 EDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             SCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             ccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence            2222 224566778999999999999999999999887779999999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.1e-35  Score=255.29  Aligned_cols=189  Identities=16%  Similarity=0.143  Sum_probs=167.7

Q ss_pred             CCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            3688999999999  99999999999999999999999986 5556666665543  47889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      ++++++|+||||||+..      +..+.+.++|++.+++|+.+++.++++++|+|++       +++||++||.++..  
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~--  150 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTK--  150 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS--
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcC--
Confidence            99999999999999753      3457889999999999999999999999999853       47999999977765  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       151 -------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~  199 (275)
T 2pd4_A          151 -------------YMAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGI  199 (275)
T ss_dssp             -------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGS
T ss_pred             -------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhc
Confidence                         467788999999999999999999999999  9999999999999987653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.5e-35  Score=254.12  Aligned_cols=189  Identities=17%  Similarity=0.171  Sum_probs=166.6

Q ss_pred             CCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|+++++++++++.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            789999999999  99999999999999999999999975 5556666665543  378899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          107 QHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      ++|++|+||||||+..      +..+.+.+++++.+++|+.+++.++++++|+|.+      ++++||++||.++..   
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~g~iv~isS~~~~~---  166 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG------RNGAIVTLSYYGAEK---  166 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT------SCCEEEEEECGGGTS---
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH------cCCEEEEEccchhcc---
Confidence            9999999999999753      3457889999999999999999999999999875      258999999977765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                  +.+++..|+++|+++++++++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       167 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  215 (285)
T 2p91_A          167 ------------VVPHYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYSI  215 (285)
T ss_dssp             ------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--C
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhcc
Confidence                        467788999999999999999999999999  9999999999999987643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-35  Score=254.50  Aligned_cols=186  Identities=27%  Similarity=0.367  Sum_probs=166.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++    +  .+.++.+|++|+++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c--CCeEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987765554432    1  478899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++++|+||||||...   +..+.+.++|++.+++|+.+++.++++++|+|++.      .++||++||..+..      
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~------  146 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAI------  146 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHH------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccC------
Confidence            9999999999999753   35678899999999999999999999999999864      58999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|+++++++++++.|++++|  |+||+|+||+++|++.+
T Consensus       147 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~  193 (270)
T 1yde_A          147 ---------GQAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWE  193 (270)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHH
T ss_pred             ---------CCCCCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhh
Confidence                     467788999999999999999999999999  99999999999999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=6.4e-35  Score=249.88  Aligned_cols=182  Identities=28%  Similarity=0.355  Sum_probs=158.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+.         +.   ..+.++.+|++|+++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~---~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ---YPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC---CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc---CCceEEEcCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998652         11   1278899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..       
T Consensus        71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~-------  138 (250)
T 2fwm_X           71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----RGGAIVTVASDAAHT-------  138 (250)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCC-------
Confidence            9999999999999753  35678999999999999999999999999999876     468999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       139 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          139 --------PRIGMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-------
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccc
Confidence                    567888999999999999999999999988  999999999999998654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-35  Score=254.45  Aligned_cols=186  Identities=25%  Similarity=0.276  Sum_probs=162.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++     ..++.++.+|++|+++++++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999987766554443     246889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+| +      +.++||++||..+. +       
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~------~~g~iv~isS~~~~-~-------  142 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E------EGGSLVLTGSVAGL-G-------  142 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C------TTCEEEEECCCTTC-C-------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h------cCCEEEEEecchhc-C-------
Confidence            999999999999753  35678899999999999999999999999999 5      25799999997764 2       


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              .++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++....
T Consensus       143 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  190 (263)
T 2a4k_A          143 --------AFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGL  190 (263)
T ss_dssp             --------HHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTS
T ss_pred             --------CCCcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhc
Confidence                    45677899999999999999999999998  9999999999999997653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=7.1e-35  Score=249.22  Aligned_cols=182  Identities=26%  Similarity=0.342  Sum_probs=157.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++             .+..+.+|++|+++++++++++.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999865422             12248899999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..      
T Consensus        77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~------  145 (247)
T 1uzm_A           77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLW------  145 (247)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEECCHhhcc------
Confidence            99999999999999753  35678999999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       146 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          146 ---------GIGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhh
Confidence                     467788999999999999999999999988  999999999999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-35  Score=256.89  Aligned_cols=206  Identities=27%  Similarity=0.360  Sum_probs=170.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~~  106 (282)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|++++ ++++.+++.+.+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888887654 35799999999998 999999999999


Q ss_pred             cCCCccEEEEcCCCCC--------------------------------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 023438          107 QHHQLNILINNAGIMG--------------------------------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  154 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--------------------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l  154 (282)
                      +++++|+||||||+..                                ...+.+.+++++.+++|+.+++.++++++|+|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            9999999999999753                                12356889999999999999999999999999


Q ss_pred             HhhhccCCCCCeEEEEcCCcccccccCCc--------------------------cc-cCCCCCCCC-CCCccchHhHHH
Q 023438          155 KKTARKSGGEGRIINVSSEGHRLAYHEGI--------------------------RF-DKINDPSGY-NGFRAYSQSKLA  206 (282)
Q Consensus       155 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~--------------------------~~-~~~~~~~~~-~~~~~y~asK~a  206 (282)
                      +++     +.++||++||.++..+.....                          .+ .......++ ++...|++||+|
T Consensus       168 ~~~-----~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a  242 (311)
T 3o26_A          168 QLS-----DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKAC  242 (311)
T ss_dssp             TTS-----SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHH
T ss_pred             ccC-----CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHH
Confidence            875     468999999988765421100                          00 001112223 456789999999


Q ss_pred             HHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       207 ~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      +++|++.|+.|+.+    |+||+|+||+|+|++.+..
T Consensus       243 ~~~~~~~la~e~~~----i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          243 LNAYTRVLANKIPK----FQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHHHHHCTT----SEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHHHHHhhcCC----ceEEEecCCceecCCcCCC
Confidence            99999999999863    8999999999999997754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.8e-35  Score=252.89  Aligned_cols=190  Identities=15%  Similarity=0.167  Sum_probs=167.3

Q ss_pred             CCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999  99999999999999999999999975 5555666655543  3788999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      .++++++|+||||||...      +..+.+.++|++.+++|+.+++.++++++|+|++       +++||++||..+.. 
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~-  152 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEK-  152 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTS-
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccC-
Confidence            999999999999999753      3557889999999999999999999999998853       47999999977765 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.++...|+++|+++++++++++.|++++|  |+||+|+||+++|++.+..
T Consensus       153 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  201 (261)
T 2wyu_A          153 --------------VVPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSI  201 (261)
T ss_dssp             --------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGGC
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhhc
Confidence                          467788999999999999999999999988  9999999999999987643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.9e-34  Score=246.87  Aligned_cols=193  Identities=28%  Similarity=0.386  Sum_probs=172.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||+||||++++++|++.|++|++++|+.+.++...+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888777777654  4478899999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          106 IQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +.++++|+||||||.... ..+.+.+++++.+++|+.+++.++++++|+|++.     +.++||++||..+..       
T Consensus        84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-------  151 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN-------  151 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC-------
T ss_pred             HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcC-------
Confidence            999999999999997543 2367889999999999999999999999999875     468999999977654       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|+++|++++.+++.++.|++..|  |++++|+||+++|++.+.
T Consensus       152 --------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          152 --------KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHT
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhh
Confidence                    466788999999999999999999999888  999999999999998664

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.7e-35  Score=254.60  Aligned_cols=191  Identities=24%  Similarity=0.322  Sum_probs=167.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+. .+...+++.+.  +.++.++.+|++|.++++++++++
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998754 44555555443  457899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|.       +.++||++||..+..     
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~~~~-----  169 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGSITGQA-----  169 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC-------TTCEEEEECCGGGTC-----
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-------cCCeEEEEechhhcc-----
Confidence            999999999999999753  356788999999999999999999999999982       368999999987765     


Q ss_pred             ccccCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                +.+ +...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       170 ----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~  218 (283)
T 1g0o_A          170 ----------KAVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHA  218 (283)
T ss_dssp             ----------SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             ----------CCCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhh
Confidence                      233 478899999999999999999999988  999999999999998653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-35  Score=247.74  Aligned_cols=190  Identities=23%  Similarity=0.311  Sum_probs=170.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ++|++|||||++|||++++++|++.|+       +|++++|+.+.++...+++...  +.++.++.+|++|+++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHH
Confidence            368999999999999999999999999       9999999988887777776543  4578999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .+.+.++++|+||||||...  +..+.+.+++++.+++|+.+++.++++++|+|+++     +.++||++||..+..   
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~---  150 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATK---  150 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS---
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecchhcC---
Confidence            99999999999999999753  34567889999999999999999999999999875     468999999987765   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                  +.++...|+++|+++++++++++.|+.+.|  |+|++|+||+++||+....
T Consensus       151 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          151 ------------AFRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCC
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhc
Confidence                        467788999999999999999999999988  9999999999999997653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5.7e-35  Score=253.52  Aligned_cols=193  Identities=19%  Similarity=0.170  Sum_probs=162.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCH----HHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSL----ASVRNFAS  102 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~----~~i~~~~~  102 (282)
                      .|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.+ +.++.++.+|++|+    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            468999999999999999999999999999999999 8888888877776543 34688999999999    99999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCCh-----------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      ++.+.++++|+||||||+..  +..+.+.           ++|++.+++|+.+++.++++++|+|.+.......+++||+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence            99999999999999999753  3456677           8999999999999999999999998721000112389999


Q ss_pred             EcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          170 VSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +||..+..               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++||
T Consensus       167 isS~~~~~---------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~  218 (276)
T 1mxh_A          167 LCDAMTDL---------------PLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP  218 (276)
T ss_dssp             ECCGGGGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC
T ss_pred             ECchhhcC---------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC
Confidence            99988765               567888999999999999999999999999  99999999999999

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=6.6e-35  Score=250.40  Aligned_cols=182  Identities=27%  Similarity=0.338  Sum_probs=155.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+.+             ..+.++.+|++|+++++++++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHH
Confidence            4668899999999999999999999999999999999986542             137789999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ++++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..      
T Consensus        83 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~------  151 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----KKGRVVLISSVVGLL------  151 (253)
T ss_dssp             HHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCCCC------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCC------
Confidence            99999999999999753  35577889999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++...
T Consensus       152 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          152 ---------GSAGQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC-----
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhh
Confidence                     356678999999999999999999999988  999999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-34  Score=249.70  Aligned_cols=193  Identities=30%  Similarity=0.354  Sum_probs=170.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||+||||+++|++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999988888777777554  45788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.+.+.     +.++||++||.++..       
T Consensus       118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~-------  185 (285)
T 2c07_A          118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLT-------  185 (285)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcc-------
Confidence            9999999999999753  35678899999999999999999999999999875     468999999988766       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|++++.++++++.|+++.|  |+||+|+||.++|++....
T Consensus       186 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  234 (285)
T 2c07_A          186 --------GNVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKI  234 (285)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----C
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhhc
Confidence                    467788999999999999999999999888  9999999999999987643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=3.4e-34  Score=244.31  Aligned_cols=196  Identities=32%  Similarity=0.347  Sum_probs=173.8

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |++++++|+++||||+||||++++++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|++|+++++++++++
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   79 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEI   79 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHH
Confidence            3467889999999999999999999999999999999999888877777765522 346889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.++++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++++.++     +.++||++||..+..     
T Consensus        80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~-----  149 (248)
T 2pnf_A           80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----RWGRIVNISSVVGFT-----  149 (248)
T ss_dssp             HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----TCEEEEEECCHHHHH-----
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhcC-----
Confidence            9999999999999997542  4567889999999999999999999999999875     468999999977665     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|++++++++.++.|+.+.|  |++++|+||+++|++....
T Consensus       150 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~  198 (248)
T 2pnf_A          150 ----------GNVGQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAVL  198 (248)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGS
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhhc
Confidence                      456788999999999999999999999888  9999999999999987643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=8.1e-35  Score=251.26  Aligned_cols=188  Identities=13%  Similarity=0.178  Sum_probs=165.7

Q ss_pred             CCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.+..+  ...++++|++|+++++++++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHH
Confidence            789999999999  9999999999999999999999987 55566666665543  347899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC------CCCc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~------~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++++|+||||||...      +..+ .+.++|++.+++|+.+++.++++++|+|++       +++||++||..+..  
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~--  154 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER--  154 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS--
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcc--
Confidence            9999999999999753      2345 788999999999999999999999999853       47999999977765  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       155 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  203 (265)
T 1qsg_A          155 -------------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGI  203 (265)
T ss_dssp             -------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGS
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcc
Confidence                         467788999999999999999999999988  9999999999999987653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-35  Score=252.38  Aligned_cols=192  Identities=26%  Similarity=0.330  Sum_probs=170.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999999999999998888877777654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.|+++     +.++||++||..+..      
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~------  172 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHV------  172 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CC------
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcC------
Confidence            99999999999999753  34567788999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLK---EDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~---~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.++...|+++|++++++++.++.|+.   +.|  |+|++|+||+++|++.+
T Consensus       173 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          173 ---------SVPFLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTT
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccc
Confidence                     456678899999999999999999997   557  99999999999999865

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.1e-35  Score=251.30  Aligned_cols=190  Identities=28%  Similarity=0.348  Sum_probs=168.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++|++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.++.+|+++.++++.+++.+.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999885 67778888888777665  557899999999999999999988776


Q ss_pred             C------CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          108 H------HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       108 ~------g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +      +++|++|||||+...  ..+.+.+++++.+++|+.+++.++++++|+|++       .++||++||.++..  
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~--  153 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRI--  153 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTS--
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhcc--
Confidence            5      359999999997533  557889999999999999999999999999843       57999999988776  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                   +.++...|+++|+|+++|+++++.|+++.|  |+||+|+||+++|++.+...
T Consensus       154 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          154 -------------SLPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             -------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTT
T ss_pred             -------------CCCCcchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhc
Confidence                         578889999999999999999999999988  99999999999999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.5e-34  Score=247.24  Aligned_cols=191  Identities=27%  Similarity=0.353  Sum_probs=170.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999 777777777776554  45788999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .++++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++++.++     + .++||++||..+..      
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~isS~~~~~------  150 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN-----DIKGTVINMSSVHEKI------  150 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCCEEEEECCGGGTS------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCCEEEEeCCHHhcC------
Confidence            99999999999997533  4567889999999999999999999999999875     3 57999999977654      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++.+++.++.|+++.|  |+|++|+||+++|++...
T Consensus       151 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  198 (261)
T 1gee_A          151 ---------PWPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHH
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhh
Confidence                     567888999999999999999999999888  999999999999998753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-34  Score=248.44  Aligned_cols=189  Identities=29%  Similarity=0.361  Sum_probs=165.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+...+.++.++.+|++|+++++++++.+.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988877777776554334568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +++|+||||||..      +.++|++.+++|+.+++.+++.++++|++...  ++.++||++||..+..           
T Consensus        85 g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~-----------  145 (267)
T 2gdz_A           85 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLM-----------  145 (267)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS-----------
T ss_pred             CCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCCCEEEEeCCccccC-----------
Confidence            9999999999964      24678899999999999999999999976411  1257999999987765           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHH--HHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANEL--ARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~l--a~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.++...|+++|++++++++++  +.|+++.|  |+||+|+||+++|++...
T Consensus       146 ----~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          146 ----PVAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILES  195 (267)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHG
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhc
Confidence                4677889999999999999995  68898888  999999999999998653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=6.3e-34  Score=246.77  Aligned_cols=193  Identities=23%  Similarity=0.303  Sum_probs=169.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            4668999999999999999999999999999999999998776665555421   2268999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          106 IQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      ++++++|+||||||...    +..+.+.+++++.+++|+.+++.++++++++|.++     +.++||++||..+..    
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~----  158 (278)
T 2bgk_A           88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFT----  158 (278)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTC----
T ss_pred             HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCeEEEEeeccccC----
Confidence            99999999999999753    34577889999999999999999999999999875     468999999987765    


Q ss_pred             CccccCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          182 GIRFDKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       182 ~~~~~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                 +.+ +...|+++|++++++++.++.|+++.|  |++++|+||+++|++....
T Consensus       159 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          159 -----------AGEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             -----------CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTS
T ss_pred             -----------CCCCCCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhh
Confidence                       344 677899999999999999999999888  9999999999999987653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=5e-34  Score=244.24  Aligned_cols=190  Identities=26%  Similarity=0.312  Sum_probs=167.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCce-eEEEccCCCHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASE  103 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v-~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +.+++++|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++     +.++ .++.+|++|++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988777666655     2356 8899999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.+ ++++|+||||||...  +..+.+.+++++.+++|+.+++.++++++|+++++     +.++||++||..+..    
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~----  149 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----GAGAIVNLGSMSGTI----  149 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS----
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEecchhcc----
Confidence            988 889999999999753  35677889999999999999999999999999886     468999999987654    


Q ss_pred             CccccCCCCCCCCCCC--ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          182 GIRFDKINDPSGYNGF--RAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                 +.+..  ..|+++|+++++++++++.|+++.|  |++++|+||+++|++.+.
T Consensus       150 -----------~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~  199 (254)
T 2wsb_A          150 -----------VNRPQFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLK  199 (254)
T ss_dssp             -----------CCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHH
T ss_pred             -----------CCCCCcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhc
Confidence                       24445  7899999999999999999999888  999999999999998653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.1e-34  Score=244.24  Aligned_cols=189  Identities=28%  Similarity=0.326  Sum_probs=167.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.. +.++.++.+|++|+++++++++++.+++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999888777766652222 346899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          111 LNILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       111 id~vi~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|+||||||....     ..+.+.+++++.+++|+.+++.++++++++|++.     +.++||++||..+..        
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~--------  147 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----GAGVIVNIASVASLV--------  147 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcc--------
Confidence            9999999997532     4567889999999999999999999999999876     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++++++++.|+.+.|  |+|++|+||+++|++...
T Consensus       148 -------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          148 -------AFPGRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCcccc
Confidence                   467788999999999999999999999888  999999999999998653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-34  Score=245.90  Aligned_cols=203  Identities=25%  Similarity=0.296  Sum_probs=171.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.....+..+++.+.. +.++.++.+|++|+++++++++++.
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            466889999999999999999999999999999999998777666666665543 3468999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++++.++.    ..++||++||..+..+...  
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~--  161 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ----QKGSIVVTSSMSSQIINQS--  161 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTSCCEE--
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC----CCceEEEeCCchhhccccc--
Confidence            99999999999999753  345678999999999999999999999999998751    2489999999876542110  


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            ...+..+...|+++|+++++++++++.|+++.|  |+|++|+||+++|++....
T Consensus       162 ------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  213 (265)
T 1h5q_A          162 ------SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHM  213 (265)
T ss_dssp             ------ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGS
T ss_pred             ------cccccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccccccc
Confidence                  001223467899999999999999999999988  9999999999999997754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.1e-34  Score=248.68  Aligned_cols=189  Identities=28%  Similarity=0.321  Sum_probs=163.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i  104 (282)
                      |++++|+++||||++|||+++|++|+++|++ |++++|+...  +..+++.+..++.++.++.+|++|+ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            3578999999999999999999999999996 9999998642  3344555555455789999999998 9999999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+.++++|+||||||..      +.+++++.+++|+.+++.++++++|++.++..  +..++||++||.++..       
T Consensus        79 ~~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~-------  143 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFN-------  143 (254)
T ss_dssp             HHHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS-------
T ss_pred             HHhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC--CCCCEEEEECchhhcc-------
Confidence            99999999999999963      46778999999999999999999999976411  1257999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++...|++||+++++++++++.++.+.|  |+||+|+||+++|++.+.
T Consensus       144 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          144 --------AIHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             --------CCTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHS
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccc
Confidence                    567788999999999999999999998788  999999999999998764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=4.2e-34  Score=246.23  Aligned_cols=194  Identities=24%  Similarity=0.309  Sum_probs=167.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999988877766655     44789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC--CC------cCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCeEEEEcCCcccc
Q 023438          107 QHHQLNILINNAGIMGT--PF------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS-GGEGRIINVSSEGHRL  177 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~-~~~g~iv~vsS~~~~~  177 (282)
                      +++++|+||||||....  ..      +.+.+++++.+++|+.+++.++++++|+|+++.... .+.++||++||..+..
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            99999999999997533  22      368899999999999999999999999998742111 1357999999988765


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                     +.++...|+++|++++++++.++.|+++.|  |+||+|+||+++|++.+.
T Consensus       163 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          163 ---------------GQVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccc
Confidence                           467788999999999999999999999888  999999999999998764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.6e-34  Score=245.04  Aligned_cols=192  Identities=27%  Similarity=0.357  Sum_probs=155.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |++++|+++||||+||||++++++|+++|++|+++ .|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998 67777777777666554  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +.++++|+||||||...  +..+.+.+++++.+++|+.+++.++++++++++++     +.++||++||..+..      
T Consensus        79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~------  147 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----KSGKIINITSIAGII------  147 (247)
T ss_dssp             HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECC-----------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcc------
Confidence            99999999999999753  24567888999999999999999999999999875     468999999987665      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|++++.++++++.|+.+.|  |++|+|+||+++|++...
T Consensus       148 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          148 ---------GNAGQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHT
T ss_pred             ---------CCCCCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhh
Confidence                     466788999999999999999999999888  999999999999998654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-34  Score=247.18  Aligned_cols=194  Identities=30%  Similarity=0.353  Sum_probs=167.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-----CCCceeEEEccCCCHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----PSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-----~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..     +..++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999999888776665554321     1146889999999999999999


Q ss_pred             HHHHhcCCCc-cEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccc
Q 023438          102 SEYNIQHHQL-NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRL  177 (282)
Q Consensus       102 ~~i~~~~g~i-d~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~  177 (282)
                      +.+.+.++++ |+||||||....  ..+.+.+++++.+++|+.+++.+++++++++.++     + .++||++||..+..
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN-----GCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCTHHHH
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCceEEEECChhhcc
Confidence            9999999998 999999997543  4567899999999999999999999999999875     3 57999999987765


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                     +.++...|+++|++++++++.++.|+++.|  |++++|+||+++|++...
T Consensus       158 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          158 ---------------GNVGQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC---
T ss_pred             ---------------CCCCChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhh
Confidence                           467788999999999999999999999988  999999999999998664

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=9.9e-35  Score=245.57  Aligned_cols=181  Identities=19%  Similarity=0.181  Sum_probs=153.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|+++.++++++++++...   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999988876665544     457889999999999999999877544   3


Q ss_pred             cEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |+||||||...  +..+.+.++|++.+++|+.+++.++++++|++.++      +++||++||..+..            
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~------------  135 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQ------------  135 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTS------------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCC------------
Confidence            99999999753  35678999999999999999999999999999874      45999999987765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       136 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  184 (230)
T 3guy_A          136 ---PKAQESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETS  184 (230)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC--------
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhc
Confidence               577889999999999999999999999998  9999999999999997754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=5.1e-34  Score=243.76  Aligned_cols=191  Identities=26%  Similarity=0.296  Sum_probs=168.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   ..++.++.+|++|+++++++++.+.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877766655532   146899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-CeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.+++.     +. ++||++||..+..       
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~-------  147 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-----GLGASIINMSSIEGFV-------  147 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEEECCGGGTS-------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCCEEEEeCCchhcc-------
Confidence            999999999999753  35678899999999999999999999999999874     33 7999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|+++++++++++.|+.  +.|  |++++|+||+++|++.+..
T Consensus       148 --------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~  198 (251)
T 1zk4_A          148 --------GDPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTS
T ss_pred             --------CCCCCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhc
Confidence                    467788999999999999999999998  777  9999999999999987653

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=7e-34  Score=241.76  Aligned_cols=179  Identities=22%  Similarity=0.269  Sum_probs=159.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|+++||||++|||+++|++|+++|++|++++|+.+.   ..+++     +  +.++.+|+++ ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999765   22222     2  7788999999 9999999999988999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  134 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----GWGRVLFIGSVTTFT-----------  134 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcc-----------
Confidence            999999999753  35678999999999999999999999999999876     468999999987765           


Q ss_pred             CCCCCC--CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGY--NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~--~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +.  ++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       135 ----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  184 (239)
T 2ekp_A          135 ----AGGPVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLP  184 (239)
T ss_dssp             ----CCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHH
T ss_pred             ----CCCCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhc
Confidence                23  6788999999999999999999999999  999999999999998653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1e-33  Score=240.99  Aligned_cols=189  Identities=28%  Similarity=0.332  Sum_probs=169.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ||+++||||++|||++++++|+++|++|+++ +|+.+..++..+++.+.  +.++.++.+|++|+++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999984 89888877777776654  45788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|+||||||....  ..+.+.+++++.+++|+.+++.++++++++|.++     +.++||++||..+..          
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~----------  143 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLI----------  143 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH----------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECChhhcC----------
Confidence            99999999997543  4567889999999999999999999999999875     468999999987765          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                           +.++...|+++|++++++++.++.|+.+.|  |+|++|+||+++|++....
T Consensus       144 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  192 (244)
T 1edo_A          144 -----GNIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTT
T ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhc
Confidence                 467788999999999999999999999888  9999999999999987653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.1e-34  Score=251.07  Aligned_cols=185  Identities=20%  Similarity=0.209  Sum_probs=161.6

Q ss_pred             CCCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|+.+..   .+++.+.. +.++.++.+|++|+++++++++++.
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHH
Confidence            478999999999  99999999999999999999999987542   12233333 3468899999999999999999999


Q ss_pred             hcCC---CccEEEEcCCCCC-------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          106 IQHH---QLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       106 ~~~g---~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +++|   ++|+||||||...       +..+.+.++|++.+++|+.+++.++++++|+|++       +++||++||..+
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~~  152 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDPS  152 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCCS
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCccc
Confidence            9998   9999999999754       3567889999999999999999999999999864       379999999654


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                       .               +.+.+..|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.+
T Consensus       153 -~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~  200 (269)
T 2h7i_A          153 -R---------------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMS  200 (269)
T ss_dssp             -S---------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHH
T ss_pred             -c---------------ccCchHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhh
Confidence             2               467788999999999999999999999999  99999999999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-33  Score=244.21  Aligned_cols=195  Identities=26%  Similarity=0.301  Sum_probs=169.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.....++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999999888887777766432356889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.+++++.+++|+.+++.+++.+++.+++...   ..++||++||..+...       
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~---~~g~iv~isS~~~~~~-------  178 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV-------  178 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC-------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCceEEEEcChhhccc-------
Confidence            999999999999753  3556789999999999999999999999999987510   1379999999776520       


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                            .+.++...|+++|++++++++.++.|+.  ..|  |+||+|+||+++|++.
T Consensus       179 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          179 ------LPLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFA  227 (279)
T ss_dssp             ------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHH
T ss_pred             ------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhh
Confidence                  1456778899999999999999999998  677  9999999999999984

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-34  Score=245.37  Aligned_cols=182  Identities=24%  Similarity=0.334  Sum_probs=156.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..     ..  .++.++.+|++|++++++++    +.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~--~~~~~~~~D~~~~~~~~~~~----~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-----KY--PGIQTRVLDVTKKKQIDQFA----NE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-----GS--TTEEEEECCTTCHHHHHHHH----HH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----hc--cCceEEEeeCCCHHHHHHHH----HH
Confidence            468999999999999999999999999999999999976644332     11  26888999999999988443    45


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..        
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  138 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSV--------  138 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTT--------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechHhCc--------
Confidence            689999999999753  34677899999999999999999999999999875     468999999987765        


Q ss_pred             cCCCCCCCCC-CCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYN-GFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~-~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.+ +...|+++|+++++++++++.|+++.|  |+||+|+||+++||+...
T Consensus       139 -------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  187 (246)
T 2ag5_A          139 -------KGVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQE  187 (246)
T ss_dssp             -------BCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHH
T ss_pred             -------CCCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchhh
Confidence                   244 678999999999999999999999988  999999999999998653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3e-33  Score=242.98  Aligned_cols=193  Identities=22%  Similarity=0.245  Sum_probs=167.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.+.  +.++.++.+|++|+++++++++++.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999988777666665543  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC---CCC-cCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMG---TPF-MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .++++|+||||||...   +.. +.+.+++++.+++|+.+++.+++.++++++++     +.++||++||..+..+    
T Consensus       108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~----  178 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKIV----  178 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSCC----
T ss_pred             HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhccC----
Confidence            9999999999999753   233 67789999999999999999999999999875     4689999999876541    


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               ...++...|+++|+++++++++++.|+++.|   +||+|+||+++|++...
T Consensus       179 ---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~---~v~~v~Pg~v~t~~~~~  226 (279)
T 3ctm_A          179 ---------NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA---RVNTISPGYIDTDITDF  226 (279)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC---EEEEEEECSBSSTTTSS
T ss_pred             ---------CCCCCcccHHHHHHHHHHHHHHHHHHhcccC---CEEEEeccCCccccccc
Confidence                     0156678999999999999999999998775   88999999999998753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=8.4e-34  Score=247.52  Aligned_cols=191  Identities=25%  Similarity=0.249  Sum_probs=168.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+++|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++.+.. ..++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998888777776542 34689999999999999999999999


Q ss_pred             cCCCccEEEEc-CCCCC-CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINN-AGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~-ag~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|+|||| ||... ...+.+.+++++.+++|+.+++.++++++|++++.      .++||++||.++..       
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-------  169 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKV-------  169 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTS-------
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCccccc-------
Confidence            99999999999 56543 24456889999999999999999999999998764      58999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRL--KEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~--~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              +.++...|++||+++++++++++.|+  ...|  |+|++|+||+++|++..
T Consensus       170 --------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~--i~v~~v~Pg~v~t~~~~  218 (286)
T 1xu9_A          170 --------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVN--VSITLCVLGLIDTETAM  218 (286)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--CEEEEEEECCBCCHHHH
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeecCccCChhHH
Confidence                    56788899999999999999999999  4566  99999999999999864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.3e-34  Score=245.74  Aligned_cols=179  Identities=25%  Similarity=0.279  Sum_probs=161.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.             +.++.++.+|++|+++++++++++.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998654             236888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||.++..        
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~--------  138 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-----RDPSIVNISSVQASI--------  138 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEECCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCchhcc--------
Confidence            999999999999753  35678999999999999999999999999999874     468999999987765        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+++++|+++++.|+++.   |+||+|+||+++|++...
T Consensus       139 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          139 -------ITKNASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhh
Confidence                   46778899999999999999999999865   899999999999998653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.2e-33  Score=239.28  Aligned_cols=185  Identities=25%  Similarity=0.312  Sum_probs=157.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.+++..+++    .  ++.++.+|++|.++++++++.+.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----E--GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h--hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987765554432    1  578899999999999999999999899


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.++++     +.++||++||..+..          
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  142 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-----GGGTIVNVGSLAGKN----------  142 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCTTTTS----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEECCchhcC----------
Confidence            9999999999753  34577889999999999999999999999999875     468999999987664          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                           +.++...|+++|+++++++++++.|+++.|  |++++|+||+++|++...
T Consensus       143 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          143 -----PFKGGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC---------
T ss_pred             -----CCCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCcccc
Confidence                 467788999999999999999999999888  999999999999998654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.8e-33  Score=241.14  Aligned_cols=198  Identities=22%  Similarity=0.296  Sum_probs=171.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|+++||||+||||++++++|+++|++|++++|+ .+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999 77777777777654  45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCC-CC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGI-MG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~-~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++++|+||||||. ..  +..+.+.+++++.+++|+.+++.++++++|++.+.....+..++||++||..+...     
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  156 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-----  156 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-----
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-----
Confidence            99999999999997 32  34567889999999999999999999999999865210112379999999876541     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|++++.+++.++.|+++.|  |+||+|+||+++|++....
T Consensus       157 ---------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  205 (258)
T 3afn_B          157 ---------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHADK  205 (258)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTTC
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCccccccccc
Confidence                     356778999999999999999999999888  9999999999999987653

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-33  Score=243.45  Aligned_cols=191  Identities=23%  Similarity=0.273  Sum_probs=168.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC---CCCceeEEEccCCCHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~---~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ...+++|+++||||++|||+++|++|++.|++|++++|+.+.++...+++.+..   .+.++.++.+|++|+++++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            346889999999999999999999999999999999999988888888876532   14578999999999999999999


Q ss_pred             HHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                      .+.+.++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.+.+.     +.++||++||.+ ..   
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~-~~---  163 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KA---  163 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEEeec-cc---
Confidence            99999999999999999643  34567889999999999999999999999965543     368999999976 33   


Q ss_pred             CCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          181 EGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                                  +.++...|+++|+++++++++++.|+.+.|  |+||+|+||+++|++
T Consensus       164 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          164 ------------GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQT  208 (303)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTG
T ss_pred             ------------CCCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccch
Confidence                        567788999999999999999999999888  999999999999995

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=7.6e-34  Score=242.35  Aligned_cols=177  Identities=17%  Similarity=0.158  Sum_probs=155.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEE-E--cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-V--RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~--r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ||++|||||++|||+++|++|+++|++|+++ +  |+.+.+++..+++    .+       +|+.|.++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9987766655544    12       2334778889999999999


Q ss_pred             CCCccEEEEcCCCC-----CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          108 HHQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       108 ~g~id~vi~~ag~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++++|+||||||..     .+..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..     
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~-----  139 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-----GGASVIFITSSVGKK-----  139 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTS-----
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhCC-----
Confidence            99999999999964     345678899999999999999999999999999875     468999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                                +.++...|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.
T Consensus       140 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          140 ----------PLAYNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ----------CCTTCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTT
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcc
Confidence                      567888999999999999999999999998  9999999999999997

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=7.1e-33  Score=235.83  Aligned_cols=184  Identities=23%  Similarity=0.308  Sum_probs=160.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++    .+  .+.++.+|++|+++++++++   
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CP--GIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----ST--TCEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cC--CCCEEEEeCCCHHHHHHHHH---
Confidence            4678999999999999999999999999999999999998766554433    22  35667999999999988876   


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  182 (282)
                       .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++.+++.++     + .++||++||..+..     
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~-----  141 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR-----GVPGAIVNVSSQCSQR-----  141 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCGGGTS-----
T ss_pred             -HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCcEEEEeCchhhcc-----
Confidence             4678999999999753  34567889999999999999999999999999875     3 58999999987665     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|+++++++++++.|+++.|  |+|++|+||+++|++.+
T Consensus       142 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          142 ----------AVTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHH
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchh
Confidence                      467788999999999999999999999888  99999999999999865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=6e-33  Score=243.62  Aligned_cols=193  Identities=22%  Similarity=0.193  Sum_probs=170.8

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...++++|+++||||+||||+++|++|++.|++|++++|+.+.+++..+++.+.+ +.++.++.+|++|.++++++++.+
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999988888887776653 346899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++++.+.    .+.++||++||..+..     
T Consensus        99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~isS~~~~~-----  169 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAET-----  169 (302)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHH-----
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----cCCCEEEEEccccccc-----
Confidence            999999999999999743  34577899999999999999999999999999743    1458999999987765     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                                +.++...|+++|+++++++++++.++++.|  |+|++|+||+++|+.
T Consensus       170 ----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          170 ----------GSGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKG  214 (302)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC--
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcc
Confidence                      467788999999999999999999999888  999999999999983

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.9e-33  Score=237.32  Aligned_cols=189  Identities=26%  Similarity=0.319  Sum_probs=167.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeE-EEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDA-MELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~-~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +|+++||||+||||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +.++.. +.+|++|.++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999998 89988887777776554  345666 8999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++++++.     +.++||++||..+..         
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~---------  144 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGIL---------  144 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhcc---------
Confidence            999999999997543  4577889999999999999999999999999875     468999999987765         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            +.++...|+++|+++++++++++.|+.+.|  |++++|+||+++|++.+..
T Consensus       145 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  193 (245)
T 2ph3_A          145 ------GNPGQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTERL  193 (245)
T ss_dssp             ------CCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTS
T ss_pred             ------CCCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhhc
Confidence                  467788999999999999999999999888  9999999999999987643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.1e-34  Score=271.60  Aligned_cols=188  Identities=24%  Similarity=0.284  Sum_probs=163.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh---------hhHHHHHHHHHHhCCCCceeEEEccCCCHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~---------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i   97 (282)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.         +.+++..+++.+.  +.++   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            568899999999999999999999999999999998765         5566667777554  2232   3688888889


Q ss_pred             HHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438           98 RNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus        98 ~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +++++++.+++|++|+||||||+..  ++.+.+.++|++++++|+.++++++|+++|+|+++     +.|+||++||.++
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----~~G~IVnisS~ag  153 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCHHH
Confidence            9999999999999999999999753  46788999999999999999999999999999886     4689999999888


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..               +.++...|++||+|+.+|+++|+.|++++|  ||||+|+|| +.|+|...
T Consensus       154 ~~---------------~~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          154 LY---------------GNFGQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             HH---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHT
T ss_pred             cC---------------CCCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccc
Confidence            76               577889999999999999999999999999  999999998 68887653

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.5e-34  Score=244.34  Aligned_cols=176  Identities=21%  Similarity=0.243  Sum_probs=155.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+.            ....+.++.+|++|+++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            3679999999999999999999999 78899999988641            13357899999999999999996654  


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|+|++       +++||++||..+..        
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~--------  132 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFI--------  132 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTC--------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHcc--------
Confidence            779999999999754  4668899999999999999999999999999865       37999999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|++||+|+++|+++|+.|++++|  |+||+|+||+++|++.+.
T Consensus       133 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~  180 (244)
T 4e4y_A          133 -------AKPNSFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRN  180 (244)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHH
T ss_pred             -------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHH
Confidence                   578889999999999999999999999999  999999999999998764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.2e-33  Score=248.66  Aligned_cols=189  Identities=26%  Similarity=0.336  Sum_probs=165.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE---------cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV---------RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~---------r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      .++++||++|||||++|||+++|++|+++|++|++.+         |+.+.++...+++.+.  +..   ..+|+++.++
T Consensus         4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~~   78 (319)
T 1gz6_A            4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVEA   78 (319)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGGG
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHHH
Confidence            4678999999999999999999999999999999964         5677777777777654  222   3589999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438           97 VRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      ++++++++.+.++++|+||||||+...  ..+.+.++|+..+++|+.+++.++++++|+|+++     +.++||++||.+
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~grIV~vsS~~  153 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASAS  153 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChh
Confidence            999999999999999999999997643  4567899999999999999999999999999886     468999999987


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..               +.++...|++||+++++|++.|+.|+++.|  |+||+|+||.+ |++.+.
T Consensus       154 ~~~---------------~~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          154 GIY---------------GNFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             HHH---------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGG
T ss_pred             hcc---------------CCCCCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccc
Confidence            765               466788999999999999999999999988  99999999998 887553

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.3e-34  Score=243.92  Aligned_cols=185  Identities=21%  Similarity=0.194  Sum_probs=137.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++++|++|||||++|||+++|++|++ |++|++++|+.+.++...+       ..++.++.+|+++.++ ...+.++..
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHH
Confidence            457899999999999999999999998 9999999999877554432       1358899999998776 444445556


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|.|++.      +++||++||..+..       
T Consensus        72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~-------  138 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNG-------  138 (245)
T ss_dssp             TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC-------------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCccccc-------
Confidence            7789999999999753  35567889999999999999999999999999875      58999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|++||+|+++|+++|+.|+++.|  |+||+|+||+++|++.+..
T Consensus       139 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  187 (245)
T 3e9n_A          139 --------PHPGNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGL  187 (245)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC--------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhh
Confidence                    577889999999999999999999999999  9999999999999997754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.6e-33  Score=240.43  Aligned_cols=181  Identities=19%  Similarity=0.197  Sum_probs=157.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++...+ +.+.  +.++..+     |+++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999888776654 5443  3344443     6778889999998889999


Q ss_pred             cEEEEcCCCC-C--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          112 NILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       112 d~vi~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |+||||||.. .  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..           
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~-----------  137 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFG-----------  137 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTS-----------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCccccc-----------
Confidence            9999999975 2  35678899999999999999999999999999876     468999999987765           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc---------ccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI---------ATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v---------~t~~~~~  242 (282)
                          +.++...|+++|+++++|+++++.|+++.|  |+||+|+||++         +|++...
T Consensus       138 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~~  194 (254)
T 1zmt_A          138 ----PWKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKT  194 (254)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTT
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCccccc
Confidence                467788999999999999999999999988  99999999999         7776543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-33  Score=237.15  Aligned_cols=199  Identities=28%  Similarity=0.319  Sum_probs=160.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++|+++||||++|||++++++|++.|  ++|++++|+.+.++.+.+ +    .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I----KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  999999999887654322 1    245789999999999999999999998


Q ss_pred             cCC--CccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc------cCCCCCeEEEEcCCcc
Q 023438          107 QHH--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR------KSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g--~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~------~~~~~g~iv~vsS~~~  175 (282)
                      .++  ++|+||||||...   +..+.+.+++++.+++|+.+++.+++++++++.++..      ..+..++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            888  8999999999754   3466788999999999999999999999999987511      1111689999999877


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..+...        ...+.++...|+++|+++++++++++.|+.+.|  |+|++|+||+++|++...
T Consensus       156 ~~~~~~--------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          156 SITDNT--------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             CSTTCC--------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC-------
T ss_pred             ccCCcc--------cccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCC
Confidence            653100        001125678899999999999999999999888  999999999999999764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=3.1e-33  Score=250.63  Aligned_cols=191  Identities=12%  Similarity=0.059  Sum_probs=161.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcChhhHH-----------HH-HHHHHHhCCCCceeEEEccCCCHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGK-----------DV-KETIVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~~~~~-----------~~-~~~l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      -.+|++|||||++|||+++|+.|++ .|++|++++|+.+..+           .. .+.+.+.  +.++..+.+|+++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHH
Confidence            4689999999999999999999999 9999999998765432           12 2233333  557889999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCC---------------CCC---------------------CcCChhhHHHHHHHH
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATN  139 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n  139 (282)
                      +++++++++.+++|++|+||||||..               .+.                     .+.+.++|++.+++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            99999999999999999999999974               222                     567899999999999


Q ss_pred             HHHHH-HHHHHHHHH-HHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC--ccchHhHHHHHHHHHHHH
Q 023438          140 HLGHF-LLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELA  215 (282)
Q Consensus       140 ~~~~~-~~~~~~~~~-l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~asK~a~~~~~~~la  215 (282)
                      ..+.+ ++++++.+. +.+      ++|+||++||.++..               +.+.+  +.|++||+|+++++++|+
T Consensus       203 ~~~~~~~~~~~~~~~~m~~------~gG~IVniSSi~~~~---------------~~p~~~~~aY~AaKaal~~ltrsLA  261 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLA------EGAQTTAFTYLGEKI---------------THDIYWNGSIGAAKKDLDQKVLAIR  261 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEE------EEEEEEEEECCCCGG---------------GTTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhh------CCcEEEEEeCchhhC---------------cCCCccchHHHHHHHHHHHHHHHHH
Confidence            99998 788877654 433      358999999988776               46666  899999999999999999


Q ss_pred             HHhccC-CCcEEEEEeeCCccccCccccCc
Q 023438          216 RRLKED-GVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       216 ~e~~~~-g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      .|+++. |  ||||+|+||.+.|++.....
T Consensus       262 ~Ela~~~G--IRVNaVaPG~i~T~~s~~ip  289 (405)
T 3zu3_A          262 ESLAAHGG--GDARVSVLKAVVSQASSAIP  289 (405)
T ss_dssp             HHHHTTTS--CEEEEEECCCCCCHHHHTST
T ss_pred             HHhCcccC--eEEEEEEeCCCcCchhhcCC
Confidence            999999 9  99999999999999877553

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.3e-33  Score=250.93  Aligned_cols=189  Identities=23%  Similarity=0.288  Sum_probs=158.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHh----CCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~----~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++|++|||||++|||+++|++|+++|++|++++|+...++...+.+...    ..+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4789999999999999999999999999998888765544433333221    123578999999999999999999873


Q ss_pred             hcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        ++++|+||||||+.  .+..+.+.+++++++++|+.+++.++++++|+|+++     +.++||++||.++..      
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~IV~isS~~~~~------  147 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLM------  147 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTS------
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCccccc------
Confidence              58999999999975  335677899999999999999999999999999875     468999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|++||+++++|+++++.|+++.|  |+||+|+||+++|++.+.
T Consensus       148 ---------~~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          148 ---------GLPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-----
T ss_pred             ---------CCCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhh
Confidence                     467788999999999999999999999999  999999999999999764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-33  Score=238.15  Aligned_cols=201  Identities=24%  Similarity=0.292  Sum_probs=166.3

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcC---CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G---~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ...++++|++|||||++|||+++|++|++.|   ++|++++|+.+..+. .+++.+.  +.++.++.+|++|.+++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKN--HSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHH--CTTEEEEECCTTCGGGHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhcc--CCceEEEEecCCChHHHHHHH
Confidence            3466889999999999999999999999999   999999999877654 3445444  347899999999999999999


Q ss_pred             HHHHhcCC--CccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCeEEEE
Q 023438          102 SEYNIQHH--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINV  170 (282)
Q Consensus       102 ~~i~~~~g--~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~------~~~~g~iv~v  170 (282)
                      +++.+.++  ++|+||||||...   +..+.+.+++++.+++|+.+++.++++++++|.++...      ..+.++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            99998888  8999999999754   34567889999999999999999999999999875211      1115799999


Q ss_pred             cCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          171 SSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       171 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ||..+..+.            .+.++...|+++|+++++|++.++.|+.+.|  |+|++|+||+++|++...
T Consensus       172 sS~~~~~~~------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          172 SSILGSIQG------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             CCGGGCSTT------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCT
T ss_pred             ecccccccC------------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCC
Confidence            998775420            0123667899999999999999999999888  999999999999999764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2e-33  Score=236.49  Aligned_cols=166  Identities=24%  Similarity=0.252  Sum_probs=148.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh--
Confidence            3578999999999999999999999999999999998753                      7999999999998875  


Q ss_pred             cCCCccEEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        +++|++|||||..   .+..+.+.++|++.+++|+.+++.++++++|++++       +++||++||..+..      
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~------  122 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRK------  122 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTS------
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhcc------
Confidence              7999999999975   34667899999999999999999999999999864       47999999987765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                               +.++...|+++|+++++|+++++.|+++    |+||+|+||+++|++.+...
T Consensus       123 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          123 ---------VVANTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSC
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcc
Confidence                     5788899999999999999999999986    89999999999999987653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-32  Score=232.26  Aligned_cols=184  Identities=26%  Similarity=0.386  Sum_probs=159.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++|+++||||+||||++++++|+++|++|++++|+.+.+++..++    .+  .+.++.+|++|+++++++++   
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CP--GIEPVCVDLGDWDATEKALG---   72 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----ST--TCEEEECCTTCHHHHHHHHT---
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cc--CCCcEEecCCCHHHHHHHHH---
Confidence            3568899999999999999999999999999999999998766554433    22  35677999999999988876   


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCC
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  182 (282)
                       .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++.+.++     + .++||++||..+..     
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~~iv~~sS~~~~~-----  141 (244)
T 1cyd_A           73 -GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR-----GVPGSIVNVSSMVAHV-----  141 (244)
T ss_dssp             -TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCGGGTS-----
T ss_pred             -HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC-----CCCeEEEEEcchhhcC-----
Confidence             5678999999999753  34567889999999999999999999999999875     3 58999999987665     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|++++.+++.++.|++..|  |++++|+||.++|++..
T Consensus       142 ----------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          142 ----------TFPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHH
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcccc
Confidence                      466788999999999999999999999888  99999999999999865

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.4e-33  Score=267.54  Aligned_cols=187  Identities=24%  Similarity=0.280  Sum_probs=160.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||+++||||++|||+++|++|+++|++|++.++.  .+++..+++.+.  +.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            46899999999999999999999999999999999864  245556666553  446777888884  456778888888


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||+..  ++.+.+.++|++++++|+.++++++|+++|+|+++     ++|+||++||.++..       
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~ag~~-------  459 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-----QFGRIINITSTSGIY-------  459 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHS-------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhcc-------
Confidence            8999999999999753  36688999999999999999999999999999875     468999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++..|++||+|+.+|+++|+.|++++|  ||||+|+||. +|+|...
T Consensus       460 --------~~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~  506 (604)
T 2et6_A          460 --------GNFGQANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLS  506 (604)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC---
T ss_pred             --------CCCCChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccc
Confidence                    577889999999999999999999999999  9999999995 9998653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.1e-33  Score=253.77  Aligned_cols=190  Identities=16%  Similarity=0.089  Sum_probs=159.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcChhhHHH------------HHHHHHHhCCCCceeEEEccCCCHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKD------------VKETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~~~~~~------------~~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      .+|++||||||+|||+++|+.|++ .|++|++++|+.+..+.            ..+.+.+.  +.++..+.+|++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            589999999999999999999999 99999999998665432            22334333  5678899999999999


Q ss_pred             HHHHHHHHHhcC-CCccEEEEcCCCC---------------CCC---------------------CcCChhhHHHHHHHH
Q 023438           97 VRNFASEYNIQH-HQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATN  139 (282)
Q Consensus        97 i~~~~~~i~~~~-g~id~vi~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n  139 (282)
                      ++++++.+.+++ |++|+||||||..               .+.                     .+.+.++|+..+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999862               122                     246889999999999


Q ss_pred             HHHHH-HHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC--ccchHhHHHHHHHHHHHHH
Q 023438          140 HLGHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELAR  216 (282)
Q Consensus       140 ~~~~~-~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~asK~a~~~~~~~la~  216 (282)
                      ..+.+ .+++++.+.....     ++|+||++||.++..               +.+.+  +.|++||+|+.+|+++|+.
T Consensus       218 ~~~~~~~~~~a~~~~~m~~-----~gG~IVniSSi~g~~---------------~~p~~~~~aY~ASKaAl~~lTrsLA~  277 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLA-----DGARSVAFSYIGTEI---------------TWPIYWHGALGKAKVDLDRTAQRLNA  277 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEE-----EEEEEEEEEECCCGG---------------GHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhh-----CCCEEEEEeCchhhc---------------cCCCccchHHHHHHHHHHHHHHHHHH
Confidence            99987 7788776543221     358999999988766               35555  8999999999999999999


Q ss_pred             HhccCCCcEEEEEeeCCccccCccccC
Q 023438          217 RLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       217 e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      |+++.|  ||||+|+||.++|++....
T Consensus       278 Ela~~G--IRVNaVaPG~i~T~~~~~i  302 (422)
T 3s8m_A          278 RLAKHG--GGANVAVLKSVVTQASAAI  302 (422)
T ss_dssp             HHHTTT--CEEEEEEECCCCCTTGGGS
T ss_pred             HhCccC--EEEEEEEcCCCcChhhhcC
Confidence            999999  9999999999999998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-33  Score=240.22  Aligned_cols=191  Identities=25%  Similarity=0.332  Sum_probs=168.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++++|++|||||+||||++++++|+++|++|++++| +.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999 777777777776554  457889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ..+++++|+||||||...  +..+.+.+++++.+++|+.+++.+++++++++++       +++||++||..+...    
T Consensus        94 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~----  162 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT----  162 (274)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC----
T ss_pred             HHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccC----
Confidence            999999999999999753  3457789999999999999999999999999863       379999999877621    


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.++...|+++|++++.+++.++.|++..|  |++++|+||.++|++..
T Consensus       163 ----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          163 ----------GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             ----------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHH
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchh
Confidence                      456788999999999999999999999888  99999999999999865

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1e-32  Score=254.98  Aligned_cols=191  Identities=31%  Similarity=0.363  Sum_probs=161.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+... +. .+++.+..   .+.++.+|++|.++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~-l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-ED-LKRVADKV---GGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HH-HHHHHHHH---TCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HH-HHHHHHHc---CCeEEEEecCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999987432 22 22222222   36789999999999999999999


Q ss_pred             hcCCC-ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHHQ-LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g~-id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++++ +|+||||||+...  ..+.+.++|++++++|+.+++++++++.+.+.++     +.++||++||.++..     
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-----~~g~iV~iSS~a~~~-----  352 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-----EGGRVIGLSSMAGIA-----  352 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-----TTCEEEEECCHHHHH-----
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEEeChHhCC-----
Confidence            99876 9999999998643  5678999999999999999999999999998764     468999999988877     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.+++..|+++|+++++|+++++.|+++.|  |+||+|+||+++|++.+..
T Consensus       353 ----------g~~g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          353 ----------GNRGQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC------
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhc
Confidence                      578899999999999999999999999999  9999999999999998754

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2.9e-34  Score=255.49  Aligned_cols=190  Identities=17%  Similarity=0.226  Sum_probs=158.5

Q ss_pred             CCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChh---------hHHHHHHHHHHhC-CCCceeEEEccCCCH--H
Q 023438           30 SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIA---------AGKDVKETIVKEI-PSAKVDAMELDLSSL--A   95 (282)
Q Consensus        30 ~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~---------~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~--~   95 (282)
                      ++|++|||||++  |||+++|++|+++|++|++.+|+..         .++...+...... ....+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  9999999999999999998877652         1111111111100 112477889999988  7


Q ss_pred             ------------------HHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 023438           96 ------------------SVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (282)
Q Consensus        96 ------------------~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  153 (282)
                                        +++++++++.+++|++|+||||||+.    .+..+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999963    34667899999999999999999999999999


Q ss_pred             HHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCc-cchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEee
Q 023438          154 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR-AYSQSKLANILHANELARRLKE-DGVDITANSVH  231 (282)
Q Consensus       154 l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~  231 (282)
                      |++       +|+||++||.++..               +.+++. .|++||+|+.+|+++|+.|+++ +|  |+||+|+
T Consensus       161 m~~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~v~  216 (329)
T 3lt0_A          161 MKP-------QSSIISLTYHASQK---------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTIS  216 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEE
T ss_pred             Hhh-------CCeEEEEeCccccC---------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEEEe
Confidence            976       37999999988776               567775 9999999999999999999998 88  9999999


Q ss_pred             CCccccCccccC
Q 023438          232 PGAIATNIIRHN  243 (282)
Q Consensus       232 Pg~v~t~~~~~~  243 (282)
                      ||+++|++.+..
T Consensus       217 PG~v~T~~~~~~  228 (329)
T 3lt0_A          217 AGPLKSRAATAI  228 (329)
T ss_dssp             ECCCCCHHHHTC
T ss_pred             cceeechhHhhh
Confidence            999999998764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=9.8e-34  Score=241.15  Aligned_cols=178  Identities=16%  Similarity=0.134  Sum_probs=157.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++|++|||||++|||+++|++|+++|++|++++|+.+...            ....++.+|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999875421            135678899999999999999999888


Q ss_pred             --CCccEEEEcCCCCCC--C-CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          109 --HQLNILINNAGIMGT--P-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       109 --g~id~vi~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        +++|+||||||....  . .+.+.+++++.+++|+.+++.++++++|+|++       +++||++||.++..      
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~------  139 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALD------  139 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS------
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHcc------
Confidence              799999999997532  3 56778999999999999999999999999854       47999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++++++++.|++  +.|  |+||+|+||+++|++...
T Consensus       140 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~~  189 (241)
T 1dhr_A          140 ---------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRK  189 (241)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCccccc
Confidence                     567889999999999999999999998  888  999999999999998653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-32  Score=233.38  Aligned_cols=182  Identities=21%  Similarity=0.227  Sum_probs=152.8

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ......++++|++|||||++|||+++|++|+++|++|++++|+.+.    .+++     + .+.++ +|+  .++++.++
T Consensus        10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~-----~-~~~~~-~D~--~~~~~~~~   76 (249)
T 1o5i_A           10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS-----G-HRYVV-CDL--RKDLDLLF   76 (249)
T ss_dssp             ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT-----C-SEEEE-CCT--TTCHHHHH
T ss_pred             hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhh-----C-CeEEE-eeH--HHHHHHHH
Confidence            3344577899999999999999999999999999999999998632    2221     2 46677 999  56778877


Q ss_pred             HHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          102 SEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      +++.    ++|+||||||...  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.++||++||..+..  
T Consensus        77 ~~~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--  145 (249)
T 1o5i_A           77 EKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVIS--  145 (249)
T ss_dssp             HHSC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--
T ss_pred             HHhc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcC--
Confidence            7653    7999999999753  35678899999999999999999999999999886     468999999987765  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                                   +.++...|+++|+++++++++++.|+++.|  |+||+|+||+++|++...
T Consensus       146 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  193 (249)
T 1o5i_A          146 -------------PIENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKE  193 (249)
T ss_dssp             -------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHH
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCcccc
Confidence                         467788999999999999999999999988  999999999999998653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.4e-33  Score=240.31  Aligned_cols=175  Identities=13%  Similarity=0.132  Sum_probs=155.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      -+|++|||||++|||+++|++|+++|++|++++|+.+...              -..+.+|++|.++++++++++.+.++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            3699999999999999999999999999999999875421              23578999999999999999999999


Q ss_pred             CccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          110 QLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       110 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      ++|+||||||....   ..+.+.+++++.+++|+.+++.+++++++++++       +++||++||..+..         
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~---------  150 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALN---------  150 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS---------
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhcc---------
Confidence            99999999997533   456788999999999999999999999999854       47999999988776         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.++...|+++|+|+++++++++.|++  +.|  |+||+|+||+++|++.+.
T Consensus       151 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~  200 (251)
T 3orf_A          151 ------RTSGMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRK  200 (251)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHH
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhh
Confidence                  578889999999999999999999987  778  999999999999998654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-33  Score=239.27  Aligned_cols=178  Identities=13%  Similarity=0.054  Sum_probs=157.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+...            ....++.+|++|+++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999876421            135678899999999999999999888


Q ss_pred             --CCccEEEEcCCCCCC--C-CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          109 --HQLNILINNAGIMGT--P-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       109 --g~id~vi~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                        +++|+||||||....  . .+.+.+++++.+++|+.+++.++++++|+|++       +++||++||..+..      
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~------  135 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMG------  135 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS------
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhcc------
Confidence              799999999997532  3 56778999999999999999999999999854       47999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLK--EDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~--~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.++...|+++|+++++|+++++.|++  +.|  |+||+|+||+++|++.+.
T Consensus       136 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~  185 (236)
T 1ooe_A          136 ---------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNRK  185 (236)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHHH
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchhh
Confidence                     577889999999999999999999998  888  999999999999998653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.4e-33  Score=245.29  Aligned_cols=193  Identities=18%  Similarity=0.170  Sum_probs=153.5

Q ss_pred             CCCCCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhh------HH-HHHHHHHHhCCCC---ceeEEEccC--
Q 023438           26 GIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAA------GK-DVKETIVKEIPSA---KVDAMELDL--   91 (282)
Q Consensus        26 ~~~~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~------~~-~~~~~l~~~~~~~---~v~~~~~Dv--   91 (282)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|+...      .. ...+++.+...+.   .+.++.+|+  
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            45689999999999  8999999999999999999999986421      00 0111121110111   124444443  


Q ss_pred             ----------C--------CHHHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHHH
Q 023438           92 ----------S--------SLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL  149 (282)
Q Consensus        92 ----------s--------~~~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~  149 (282)
                                +        |+++++.+++++.+++|++|+||||||+.    .+..+.+.++|++.+++|+.+++.++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      3        35689999999999999999999999964    3456789999999999999999999999


Q ss_pred             HHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC-ccchHhHHHHHHHHHHHHHHhcc-CCCcEEE
Q 023438          150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDITA  227 (282)
Q Consensus       150 ~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~g~~i~v  227 (282)
                      ++|+|++       +|+||++||.++..               +.+++ ..|++||+|+++|+++|+.|+++ +|  |+|
T Consensus       164 ~~~~m~~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~g--Irv  219 (315)
T 2o2s_A          164 FGPIMNE-------GGSAVTLSYLAAER---------------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYG--VRV  219 (315)
T ss_dssp             HSTTEEE-------EEEEEEEEEGGGTS---------------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTC--CEE
T ss_pred             HHHHHhc-------CCEEEEEecccccc---------------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccC--eEE
Confidence            9999864       37999999987765               45666 58999999999999999999985 88  999


Q ss_pred             EEeeCCccccCcccc
Q 023438          228 NSVHPGAIATNIIRH  242 (282)
Q Consensus       228 ~~v~Pg~v~t~~~~~  242 (282)
                      |+|+||+++|++.+.
T Consensus       220 n~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          220 NAISAGPLKSRAASA  234 (315)
T ss_dssp             EEEEECCCCCHHHHH
T ss_pred             EEEecccccchhhhh
Confidence            999999999998654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=7.2e-33  Score=242.88  Aligned_cols=194  Identities=18%  Similarity=0.196  Sum_probs=154.0

Q ss_pred             CCCCCCCCEEEEecCC--ChhHHHHHHHHHHcCCEEEEEEcChhhHH-------HHHHHHHHhCC-C---CceeEEEcc-
Q 023438           25 DGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGK-------DVKETIVKEIP-S---AKVDAMELD-   90 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s--~gIG~aia~~l~~~G~~Vii~~r~~~~~~-------~~~~~l~~~~~-~---~~v~~~~~D-   90 (282)
                      +.+++++|++|||||+  +|||+++|++|+++|++|++++|+.....       +..+++ +... +   .....+.+| 
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence            3567899999999999  99999999999999999999997632110       000111 1110 0   012334443 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHH
Q 023438           91 -------LS----S--------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLT  147 (282)
Q Consensus        91 -------vs----~--------~~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~  147 (282)
                             ++    |        +++++++++++.+++|++|+||||||+.    .+..+.+.++|++.+++|+.+++.++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   32    2        6689999999999999999999999963    34567899999999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC-ccchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 023438          148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELARRLKE-DGVDI  225 (282)
Q Consensus       148 ~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~g~~i  225 (282)
                      ++++|+|++       +++||++||.++..               +.++. ..|++||+|+++|+++|+.|+++ +|  |
T Consensus       161 ~~~~~~m~~-------~g~iv~isS~~~~~---------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~g--i  216 (297)
T 1d7o_A          161 SHFLPIMNP-------GGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQN--I  216 (297)
T ss_dssp             HHHGGGEEE-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--C
T ss_pred             HHHHHHhcc-------CceEEEEecccccc---------------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccC--c
Confidence            999999854       37999999987765               45666 68999999999999999999985 78  9


Q ss_pred             EEEEeeCCccccCccccC
Q 023438          226 TANSVHPGAIATNIIRHN  243 (282)
Q Consensus       226 ~v~~v~Pg~v~t~~~~~~  243 (282)
                      +||+|+||+++|++.+..
T Consensus       217 ~vn~v~PG~v~T~~~~~~  234 (297)
T 1d7o_A          217 RVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             EEEEEEECCCBCCCSSCC
T ss_pred             EEEEEeccccccchhhhc
Confidence            999999999999997754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.8e-32  Score=262.15  Aligned_cols=191  Identities=28%  Similarity=0.308  Sum_probs=150.1

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc---------ChhhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR---------DIAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r---------~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ...++++||++|||||++|||+++|++|+++|++|++++|         +.+.++...+++.+.  +..   +.+|+++.
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~D~~d~   86 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGE---AVADYNSV   86 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCC---EEECCCCG
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCe---EEEEeCCH
Confidence            3457899999999999999999999999999999999988         667777777777654  222   24799999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ++++++++++.+.+|++|+||||||+..  +..+.+.++|++++++|+.++++++++++|+|+++     +.|+||++||
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-----~~g~IV~isS  161 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIMTSS  161 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECC
Confidence            9999999999999999999999999764  35678999999999999999999999999999985     5689999999


Q ss_pred             CcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          173 EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++..               +.++...|++||+|+.+|+++|+.|+++.|  |+||+|+||.+ |++...
T Consensus       162 ~a~~~---------------~~~~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~  213 (613)
T 3oml_A          162 NSGIY---------------GNFGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEG  213 (613)
T ss_dssp             HHHHH---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CC
T ss_pred             HHHcC---------------CCCCChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhh
Confidence            88876               577889999999999999999999999999  99999999975 666554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.5e-32  Score=233.61  Aligned_cols=202  Identities=27%  Similarity=0.348  Sum_probs=164.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+..++..+++.+.  +.++.++.+|++|.++++.+++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 9999999999998888888877654  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCcCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC----
Q 023438          108 HHQLNILINNAGIMGT-PFMLS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE----  181 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~-~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~----  181 (282)
                      ++++|+||||||.... ..+.+ .++++..+++|+.+++.+++++++++++       .++||++||..+..+...    
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChh
Confidence            9999999999997543 22333 5889999999999999999999998754       369999999776532000    


Q ss_pred             ------Cccc-----------------cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCc
Q 023438          182 ------GIRF-----------------DKINDPSGYNGFRAYSQSKLANILHANELARRLKE----DGVDITANSVHPGA  234 (282)
Q Consensus       182 ------~~~~-----------------~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~----~g~~i~v~~v~Pg~  234 (282)
                            ...+                 .......+.+. ..|+++|++++.+++.++.++.+    .|  |+|++|+||+
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~  229 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGW  229 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCc
Confidence                  0000                 00000112233 78999999999999999999987    67  9999999999


Q ss_pred             cccCcccc
Q 023438          235 IATNIIRH  242 (282)
Q Consensus       235 v~t~~~~~  242 (282)
                      ++|++.+.
T Consensus       230 v~t~~~~~  237 (276)
T 1wma_A          230 VRTDMAGP  237 (276)
T ss_dssp             BCSTTTCT
T ss_pred             cccCcCCc
Confidence            99999764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.4e-33  Score=244.59  Aligned_cols=193  Identities=19%  Similarity=0.207  Sum_probs=132.7

Q ss_pred             CCCCCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcCh-----------hhHH-----------HHHHHHHHhCCC
Q 023438           26 GIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDI-----------AAGK-----------DVKETIVKEIPS   81 (282)
Q Consensus        26 ~~~~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~-----------~~~~-----------~~~~~l~~~~~~   81 (282)
                      .+++++|++|||||  ++|||+++|++|+++|++|++++|+.           +.++           +..+++.+....
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            35688999999999  89999999999999999999998753           1111           112222211000


Q ss_pred             -CceeEEEcc------------CCC--------HHHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHH
Q 023438           82 -AKVDAMELD------------LSS--------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQF  136 (282)
Q Consensus        82 -~~v~~~~~D------------vs~--------~~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~  136 (282)
                       ....++.+|            +++        +++++++++++.+++|++|+||||||+.    .+..+.+.++|++.+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence             012344443            232        4589999999999999999999999964    345678999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC-ccchHhHHHHHHHHHHHH
Q 023438          137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF-RAYSQSKLANILHANELA  215 (282)
Q Consensus       137 ~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~asK~a~~~~~~~la  215 (282)
                      ++|+.++++++++++|+|++       +++||++||.++..               +.++. ..|+++|+|+++|+++|+
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~---------------~~~~~~~~Y~asKaal~~l~~~la  221 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKE-------GGSALALSYIASEK---------------VIPGYGGGMSSAKAALESDCRTLA  221 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE-------EEEEEEEEECC---------------------------------THHHHHHHH
T ss_pred             hHhhHHHHHHHHHHHHHHhc-------CceEEEEecccccc---------------ccCccchhhHHHHHHHHHHHHHHH
Confidence            99999999999999999864       37999999987765               45666 689999999999999999


Q ss_pred             HHhcc-CCCcEEEEEeeCCccccCcccc
Q 023438          216 RRLKE-DGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       216 ~e~~~-~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .|+++ +|  |+||+|+||+++|++.+.
T Consensus       222 ~el~~~~g--Irvn~v~PG~v~T~~~~~  247 (319)
T 2ptg_A          222 FEAGRARA--VRVNCISAGPLKSRAASA  247 (319)
T ss_dssp             HHHHHHHC--CEEEEEEECCCC------
T ss_pred             HHhccccC--eeEEEEeeCCccChhhhh
Confidence            99985 78  999999999999998764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.97  E-value=3.2e-31  Score=241.16  Aligned_cols=193  Identities=14%  Similarity=0.025  Sum_probs=160.5

Q ss_pred             CCCCEEEEecCCChhHHH--HHHHHHHcCCEEEEEEcChhhH-----------HHHHHHHHHhCCCCceeEEEccCCCHH
Q 023438           29 GSGLTAIVTGATSGIGTE--TARVLALRGVHVVMGVRDIAAG-----------KDVKETIVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~a--ia~~l~~~G~~Vii~~r~~~~~-----------~~~~~~l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      ..||++|||||++|||++  +++.|++.|++|++++|+....           .+..+++.+.. +.++.++.+|+++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeCCCHH
Confidence            578999999999999999  9999999999999999975432           12333333333 557899999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCCC---------------CCC---------------------CcCChhhHHHHHHHH
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATN  139 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n  139 (282)
                      +++++++++.+++|++|+||||||..               .+.                     .+.+.++|+..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            99999999999999999999999973               112                     245889999999999


Q ss_pred             HHHHH-HHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCC--ccchHhHHHHHHHHHHHHH
Q 023438          140 HLGHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGF--RAYSQSKLANILHANELAR  216 (282)
Q Consensus       140 ~~~~~-~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~asK~a~~~~~~~la~  216 (282)
                      ..+.+ .+++++.+.....     ++++||++||.++..               +.+.+  +.|++||+|+++|+++|+.
T Consensus       217 ~~~~~~~~~~~l~~~~~~~-----~gg~IV~iSSi~~~~---------------~~p~~~~~aY~ASKaAL~~ltrsLA~  276 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFS-----DKATTIAYSYIGSPR---------------TYKIYREGTIGIAKKDLEDKAKLINE  276 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEE-----EEEEEEEEECCCCGG---------------GTTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhc-----CCcEEEEEeCchhcC---------------CCCccccHHHHHHHHHHHHHHHHHHH
Confidence            99888 7777776653322     368999999988766               46666  9999999999999999999


Q ss_pred             Hhcc-CCCcEEEEEeeCCccccCccccCc
Q 023438          217 RLKE-DGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       217 e~~~-~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      |+++ .|  ||||+|+||.+.|++.....
T Consensus       277 ELa~~~G--IrVN~V~PG~v~T~~s~~ip  303 (418)
T 4eue_A          277 KLNRVIG--GRAFVSVNKALVTKASAYIP  303 (418)
T ss_dssp             HHHHHHS--CEEEEEECCCCCCHHHHTST
T ss_pred             HhCCccC--eEEEEEECCcCcChhhhcCC
Confidence            9999 89  99999999999999977653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=2.2e-30  Score=219.80  Aligned_cols=181  Identities=26%  Similarity=0.281  Sum_probs=154.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|+++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             13578999999999999999999 77889


Q ss_pred             ccEEEEcCCCCCC--CCcCC----hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCcccccccCCc
Q 023438          111 LNILINNAGIMGT--PFMLS----KDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~----~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +|++|||||....  ..+.+    .+++++.+++|+.+++.+++++.+.+.+.... .++.++||++||..+..      
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------  140 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------  140 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc------
Confidence            9999999997532  33333    34999999999999999999999999874110 01235999999988765      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.++...|+++|++++.++++++.|+++.|  |+|++|+||+++|++....
T Consensus       141 ---------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~  189 (242)
T 1uay_A          141 ---------GQIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGL  189 (242)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTS
T ss_pred             ---------CCCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhcc
Confidence                     467788999999999999999999999888  9999999999999987653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=1e-30  Score=224.17  Aligned_cols=182  Identities=20%  Similarity=0.229  Sum_probs=137.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++.              . +.+|+++.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998654221              1 568999999998887743   3799


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC----
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK----  187 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~----  187 (282)
                      |+||||||....     .+.+++.+++|+.+++.++++++|+|+++     +.++||++||.++............    
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEECChhhhccccccchhhhhhcc
Confidence            999999997542     13388999999999999999999999874     4589999999877632100000000    


Q ss_pred             ---------CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          188 ---------INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       188 ---------~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               .....+.++...|++||++++++++.++.|+++.|  |+||+|+||+++|++.+..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchhh
Confidence                     00002345678999999999999999999999988  9999999999999997643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=1.5e-29  Score=237.67  Aligned_cols=184  Identities=18%  Similarity=0.165  Sum_probs=158.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEE-EcCh-------------hhHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMG-VRDI-------------AAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~-~r~~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      +++++|||||++|||.++|++|+++|++ |+++ +|+.             +.+++..+++.+.  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            6899999999999999999999999997 7777 8983             5566777777665  66899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEc
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVS  171 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vs  171 (282)
                      +++.++++++. +++++|+||||||+..  ...+.+.+++++++++|+.+++++.+++.+.++++     + .++||++|
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~-----~~~~~iV~~S  401 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAG-----GRPPVLVLFS  401 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC---------CCCEEEEEE
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccC-----CCCCEEEEEC
Confidence            99999999998 7899999999999864  36688999999999999999999999999998764     2 57999999


Q ss_pred             CCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          172 SEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      |.++..               +.+++..|+++|+++++|    +.++...|  +++++|+||+++|+|...
T Consensus       402 S~a~~~---------------g~~g~~~YaaaKa~l~~l----A~~~~~~g--i~v~sI~pG~~~tgm~~~  451 (525)
T 3qp9_A          402 SVAAIW---------------GGAGQGAYAAGTAFLDAL----AGQHRADG--PTVTSVAWSPWEGSRVTE  451 (525)
T ss_dssp             EGGGTT---------------CCTTCHHHHHHHHHHHHH----HTSCCSSC--CEEEEEEECCBTTSGGGS
T ss_pred             CHHHcC---------------CCCCCHHHHHHHHHHHHH----HHHHHhCC--CCEEEEECCccccccccc
Confidence            988877               578899999999997766    56777788  999999999999999854

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=1.3e-28  Score=204.08  Aligned_cols=171  Identities=22%  Similarity=0.277  Sum_probs=145.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+++||||+||||++++++|+++  +|++++|+.+.+++..+++     ..  .++.+|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            57999999999999999999998  9999999987766655443     11  7888999999999999887    6799


Q ss_pred             cEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |+||||||...  +..+.+.+++++.+++|+.+++.+++++    .+.     +.++||++||..+..            
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~sS~~~~~------------  126 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-----KGARAVFFGAYPRYV------------  126 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-----EEEEEEEECCCHHHH------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-----CCcEEEEEcChhhcc------------
Confidence            99999999753  3456788999999999999999999988    221     357999999988765            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                         +.++...|+++|++++.+++.++.|+++.|  +++++|+||++.|++..
T Consensus       127 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          127 ---QVPGFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             ---SSTTBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGG
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCcc
Confidence               467788999999999999999999999888  99999999999999843

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.96  E-value=2.2e-28  Score=251.39  Aligned_cols=193  Identities=18%  Similarity=0.133  Sum_probs=161.4

Q ss_pred             CCCCCCCCEEEEecCCCh-hHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~g-IG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      ..++++||++|||||++| ||+++|++|++.|++|+++ +|+.+.+++..+++.+.+.  +.++.++.+|++|.++++.+
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            345789999999999998 9999999999999999998 5887777777777755442  45789999999999999999


Q ss_pred             HHHHHhc-----CC-CccEEEEcCCCCC---CCCcCC--hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCCCCCeE
Q 023438          101 ASEYNIQ-----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRI  167 (282)
Q Consensus       101 ~~~i~~~-----~g-~id~vi~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~~~~~~~~g~i  167 (282)
                      ++.+.+.     +| ++|+||||||+..   +..+.+  .++|++++++|+.+++.+++++  +|.|.++     ++++|
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-----~~G~I  823 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVI  823 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-----CEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-----CCCEE
Confidence            9999988     66 9999999999753   345667  8999999999999999999988  5666553     35799


Q ss_pred             EEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-cCcccc
Q 023438          168 INVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-ANELARRLKEDGVDITANSVHPGAIA-TNIIRH  242 (282)
Q Consensus       168 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~-~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~~  242 (282)
                      |++||..+..                 ++...|++||+|+.+| ++.++.++++.   |+||+|+||+++ |+|+..
T Consensus       824 VnISS~ag~~-----------------gg~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~  880 (1887)
T 2uv8_A          824 LPMSPNHGTF-----------------GGDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSA  880 (1887)
T ss_dssp             EEECSCTTCS-----------------SCBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----
T ss_pred             EEEcChHhcc-----------------CCCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEeccccccccccc
Confidence            9999987654                 2567899999999999 89999998765   999999999999 898764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=7.9e-29  Score=204.86  Aligned_cols=162  Identities=14%  Similarity=0.210  Sum_probs=142.4

Q ss_pred             CC-EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GL-TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~-~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +| +++||||+||||++++++|+ +|++|++++|+..                   ++.+|++++++++++++.+    +
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----G   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----C
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----C
Confidence            44 79999999999999999999 9999999999853                   3679999999999998875    6


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      ++|+||||||...  +..+.+.+++++.+++|+.+++.+++++.+.+++       +++||++||..+..          
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~----------  120 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMED----------  120 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTS----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcC----------
Confidence            8999999999653  3456788999999999999999999999998753       37999999977654          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                           +.++...|+++|++++.+++.++.|+ +.|  +++++|+||+++|++..
T Consensus       121 -----~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~  166 (202)
T 3d7l_A          121 -----PIVQGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDK  166 (202)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHH
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhh
Confidence                 46778899999999999999999999 677  99999999999999753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.95  E-value=1.5e-27  Score=244.74  Aligned_cols=193  Identities=18%  Similarity=0.121  Sum_probs=161.8

Q ss_pred             CCCCCCCCEEEEecCCCh-hHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~g-IG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      +.++++||++|||||++| ||+++|++|++.|++|++++ |+...+.+..+++.+.+.  +.++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            346789999999999999 99999999999999999985 667777666666655432  45789999999999999999


Q ss_pred             HHHHHhc---CC-CccEEEEcCCCCC---CCCcCC--hhhHHHHHHHHHHHHHHHHHH--HHHHHHhhhccCCCCCeEEE
Q 023438          101 ASEYNIQ---HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNL--LLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus       101 ~~~i~~~---~g-~id~vi~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~l~~~~~~~~~~g~iv~  169 (282)
                      ++.+.+.   +| ++|+||||||+..   ++.+.+  .++|++++++|+.+++.+++.  +++.|.++     +.++||+
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-----~~G~IVn  800 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-----PAQVILP  800 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-----CEEECCE
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-----CCCEEEE
Confidence            9999988   88 9999999999753   456677  799999999999999999987  66666543     3479999


Q ss_pred             EcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHH-hccCCCcEEEEEeeCCccc-cCcccc
Q 023438          170 VSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARR-LKEDGVDITANSVHPGAIA-TNIIRH  242 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e-~~~~g~~i~v~~v~Pg~v~-t~~~~~  242 (282)
                      +||..+..                 ++...|+++|+|+++|++.++.+ +++ +  |+||+|+||+++ |+|+..
T Consensus       801 ISS~ag~~-----------------gg~~aYaASKAAL~aLt~~laAeEla~-~--IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          801 LSPNHGTF-----------------GNDGLYSESKLALETLFNRWYSESWGN-Y--LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             ECSCSSSS-----------------SCCSSHHHHHHHHTTHHHHHHHSTTTT-T--EEEEEEEECCBCCTTSCSH
T ss_pred             Ecchhhcc-----------------CCchHHHHHHHHHHHHHHHHHHHHcCC-C--eEEEEEEecceecCccccc
Confidence            99987764                 24678999999999999877665 654 3  999999999999 998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=8.3e-29  Score=247.52  Aligned_cols=193  Identities=18%  Similarity=0.117  Sum_probs=162.7

Q ss_pred             CCCCCCCCEEEEecCCCh-hHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~g-IG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      +.++++||++|||||++| ||+++|++|++.|++|+++ +|+.+.+++..+++.+.+.  +.++.++++|++|.++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            346789999999999998 9999999999999999998 5777777766666644432  45789999999999999999


Q ss_pred             HHHHHhc-----CC-CccEEEEcCCCCC---CCCcCC--hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCCCCCeE
Q 023438          101 ASEYNIQ-----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRI  167 (282)
Q Consensus       101 ~~~i~~~-----~g-~id~vi~~ag~~~---~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~~~~~~~~g~i  167 (282)
                      ++.+.+.     +| ++|+||||||+..   +..+.+  .++|++++++|+.+++.+++++  ++.|.++     +.++|
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-----ggGrI  624 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVI  624 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-----CEEEC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-----CCCEE
Confidence            9999988     77 9999999999753   345666  8999999999999999999998  6777653     35799


Q ss_pred             EEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-cCcccc
Q 023438          168 INVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH-ANELARRLKEDGVDITANSVHPGAIA-TNIIRH  242 (282)
Q Consensus       168 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~-~~~la~e~~~~g~~i~v~~v~Pg~v~-t~~~~~  242 (282)
                      |++||.++..                 ++...|++||+|+++| .+.++.++++.   |+||+|+||+++ |+++..
T Consensus       625 VnISSiAG~~-----------------Gg~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~~  681 (1688)
T 2pff_A          625 LPMSPNHGTF-----------------GGDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSA  681 (1688)
T ss_dssp             CCCCSCTTTS-----------------SCBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSCT
T ss_pred             EEEEChHhcc-----------------CCchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccCC
Confidence            9999987654                 2567999999999999 77888888764   999999999999 787653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=6.3e-27  Score=217.81  Aligned_cols=178  Identities=21%  Similarity=0.234  Sum_probs=150.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++|||||+||||+++|++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.||++|.+++.++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999 8999999743   355666666554  56899999999999999999999877


Q ss_pred             cCCCccEEEEcCCCC-C--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          107 QHHQLNILINNAGIM-G--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       107 ~~g~id~vi~~ag~~-~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      . +++|+||||||+. .  ...+.+.+++++++++|+.+++++.+.+.+.         ..++||++||.++..      
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~---------~~~~iV~~SS~a~~~------  380 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL---------DLDAFVLFSSGAAVW------  380 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHT------
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc---------CCCEEEEEeChHhcC------
Confidence            7 6899999999976 2  3678899999999999999999988876544         356999999988877      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                               +.+++..|+++|+++++|++    ++...|  +++++|+||.+.++.+.
T Consensus       381 ---------g~~g~~~YaAaKa~ldala~----~~~~~G--i~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          381 ---------GSGGQPGYAAANAYLDALAE----HRRSLG--LTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             ---------TCTTCHHHHHHHHHHHHHHH----HHHHTT--CCCEEEEECEESSSCC-
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCcccCCccc
Confidence                     57889999999999877766    455678  99999999999877654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=3.1e-27  Score=201.59  Aligned_cols=181  Identities=22%  Similarity=0.186  Sum_probs=142.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||+||||++++++|+++|++|++++|+.+..+.               .+.+|++++++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998654211               1568999999999988865   3689


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC----
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK----  187 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~----  187 (282)
                      |+||||||....     .+++++.+++|+.+++.+++++.+.+++.     +.++||++||..++.......+...    
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRG-----QQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCceEEEEeccccccccccccchhhhhcc
Confidence            999999996532     24578899999999999999999999874     3589999999877643100000000    


Q ss_pred             CCCC-------CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDP-------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~-------~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..+.       ...++...|+++|++++.+++.++.++.+.|  +++++|+||.+.|++...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~  193 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQA  193 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHH
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhh
Confidence            0000       0013567899999999999999999998888  999999999999998653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=8.7e-27  Score=228.43  Aligned_cols=177  Identities=21%  Similarity=0.304  Sum_probs=156.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHH-HcCC-EEEEEEcC---hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLA-LRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~-~~G~-~Vii~~r~---~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .++++|||||++|||+++|+.|+ ++|+ +|++++|+   .+..++..+++.+.  +.++.++.||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 69999999   44566777777665  678999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+.+ ++|+||||||+..  .+.+.+.++|++.+++|+.|++++.+++.+.|           +||++||.++..     
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~-----  669 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVL-----  669 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHH-----
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcC-----
Confidence            8776 9999999999864  36688999999999999999999999885544           799999999887     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                +.+++..|+++|+    |+++|+.++...|  |++|+|+||++.|+++.
T Consensus       670 ----------g~~g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          670 ----------GSGGQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             ----------TCSSCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHH
T ss_pred             ----------CCCCCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhh
Confidence                      5889999999995    6888888998999  99999999999988654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=3.5e-25  Score=237.27  Aligned_cols=191  Identities=14%  Similarity=0.101  Sum_probs=149.0

Q ss_pred             CCCCCEEEEecCCCh-hHHHHHHHHHHcCCEEEEEEcChhh-----HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        28 ~~~~~~~lItG~s~g-IG~aia~~l~~~G~~Vii~~r~~~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      .++||++|||||++| ||+++|+.|++.|++|++++|+.+.     ++++.+++...  +.++..+++|+++.+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            389999999999999 9999999999999999999998765     44444444222  457889999999999999999


Q ss_pred             HHHHh----cCCCccEEEEcCCCC-------CCCCcCChhhHHHH----HHHHHHHHHHHHHHHHHHHHhhhccCCCCCe
Q 023438          102 SEYNI----QHHQLNILINNAGIM-------GTPFMLSKDNIELQ----FATNHLGHFLLTNLLLDTMKKTARKSGGEGR  166 (282)
Q Consensus       102 ~~i~~----~~g~id~vi~~ag~~-------~~~~~~~~~~~~~~----~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~  166 (282)
                      +.+.+    ++|++|+||||||+.       ....+.+.++|+..    +++|+.+++.+++++.+.|.....  +....
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~--g~~~~ 2288 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDI--ASRLH 2288 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--CCCEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CceeE
Confidence            99988    889999999999971       12233345555555    999999999999999999987521  01122


Q ss_pred             EE-EEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccc-cCcccc
Q 023438          167 II-NVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIA-TNIIRH  242 (282)
Q Consensus       167 iv-~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~-t~~~~~  242 (282)
                      ++ ..++..+                 ..++...|++||+|+.+|+++|+.|  +++ +  |+||+|+||+|+ |+++..
T Consensus      2289 ii~~~ss~~g-----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~--IrVn~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D         2289 VVLPGSPNRG-----------------MFGGDGAYGEAKSALDALENRWSAEKSWAE-R--VSLAHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp             EEEEECSSTT-----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-T--EEEEEEECCCEECSTTTTT
T ss_pred             EEEECCcccc-----------------cCCCchHHHHHHHHHHHHHHHHHhccccCC-C--eEEEEEeecccCCCccccc
Confidence            33 3333221                 1345668999999999999999999  654 4  999999999999 777654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=4.6e-25  Score=205.53  Aligned_cols=176  Identities=23%  Similarity=0.257  Sum_probs=146.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.||++|.+++..+++.+ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            579999999999999999999999999 5999999875   345555666554  567999999999999999999998 


Q ss_pred             hcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      ..++++|+||||||+...  ..+.+.+++++++++|+.+++++.+.+.+.         +.++||++||.++..      
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------~~~~~V~~SS~a~~~------  366 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL---------DLTAFVLFSSFASAF------  366 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHT------
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------CCCEEEEEcChHhcC------
Confidence            566899999999997643  557899999999999999999998876432         357999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                               +.++...|+++|+++++|++    ++...|  +++++|+||.+.++
T Consensus       367 ---------g~~g~~~Yaaaka~l~~la~----~~~~~g--i~v~~i~pG~~~~~  406 (486)
T 2fr1_A          367 ---------GAPGLGGYAPGNAYLDGLAQ----QRRSDG--LPATAVAWGTWAGS  406 (486)
T ss_dssp             ---------CCTTCTTTHHHHHHHHHHHH----HHHHTT--CCCEEEEECCBC--
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCeeCCC
Confidence                     56788999999999877754    455567  89999999999887

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=7.3e-25  Score=189.00  Aligned_cols=173  Identities=17%  Similarity=0.125  Sum_probs=139.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++|++|||||+||||++++++|++.|++|++++|+.....           ..++.++.+|++|.+++.++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            45689999999999999999999999999999999875422           3468999999999999998877      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+||||||..      +.+++++.+++|+.+++.+++++.+.         +.++||++||..++....   ...++
T Consensus        64 -~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~g~~~---~~~~~  124 (267)
T 3rft_A           64 -GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH---------GQPRIVFASSNHTIGYYP---QTERL  124 (267)
T ss_dssp             -TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGTTSB---TTSCB
T ss_pred             -CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcchHHhCCCC---CCCCC
Confidence             689999999972      44567889999999999999998332         357999999977653211   11235


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++.+.++...|+.+|++.+.+++.++.++   |  +++++|+||.+.++....
T Consensus       125 ~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g--~~~~~vr~~~v~~~~~~~  173 (267)
T 3rft_A          125 GPDVPARPDGLYGVSKCFGENLARMYFDKF---G--QETALVRIGSCTPEPNNY  173 (267)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECBCSSSCCST
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CeEEEEEeecccCCCCCC
Confidence            556677788899999999999999999887   3  667778888887775443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=4.6e-24  Score=199.64  Aligned_cols=177  Identities=24%  Similarity=0.263  Sum_probs=147.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.||++|.+++.++++.  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            578999999999999999999999999 6999999874   345556666543  56799999999999999999887  


Q ss_pred             hcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                         +++|+||||||+...  ..+.+.++++.++++|+.+++++.+.+.+. .       +.++||++||.++..      
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~-------~~~~~V~~SS~a~~~------  396 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K-------GLDAFVLFSSVTGTW------  396 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T-------TCCCEEEEEEGGGTT------
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c-------CCCEEEEEeCHHhcC------
Confidence               689999999997643  457889999999999999999998765432 0       246999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-ccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI-ATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v-~t~~~~~  242 (282)
                               +.+++..|+++|+++++|++.+    ...|  +++++|+||++ +|+|...
T Consensus       397 ---------g~~g~~~YaaaKa~ld~la~~~----~~~g--i~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          397 ---------GNAGQGAYAAANAALDALAERR----RAAG--LPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHH----HTTT--CCCEEEEECCBCSTTCCCC
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHH----HHcC--CcEEEEECCcccCCccccc
Confidence                     5778899999999988887754    4567  88999999999 7887654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.90  E-value=8.9e-23  Score=181.02  Aligned_cols=192  Identities=15%  Similarity=0.104  Sum_probs=144.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEE-EccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-ELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~-~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++++++|||||+|+||++++++|++.|++|++++|+........+.+.... +.++.++ .+|++|.+++.++++   
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc---
Confidence            44688999999999999999999999999999999999877666555544333 2468888 799999887776654   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+||||||.....     +++.+.+++|+.++..+++++.+.   .     +.++||++||.+++.........
T Consensus        83 ----~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~-----~~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---P-----SVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---T-----TCCEEEEECCGGGTCCCCTTCCC
T ss_pred             ----CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---C-----CCcEEEEeccHHHhcCCCCCCCC
Confidence                689999999965321     346778999999999999888652   1     24699999997765321100000


Q ss_pred             cCCCCCC----------------CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPS----------------GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~----------------~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++.++.                +..+...|+.+|.+.+.+++.++.++.. +  +++++++||.+.+|....
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~  215 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDP  215 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCT
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCC
Confidence            1122222                2234568999999999999999999865 6  899999999999997654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=1.8e-22  Score=179.41  Aligned_cols=186  Identities=17%  Similarity=0.097  Sum_probs=145.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++++|||||+|+||++++++|++.|++|++++|+.....+..+++.+.. +.++.++.+|++|++++.++++.     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46799999999999999999999999999999998877766666665433 34688999999999999999886     3


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+||||||....  ....+...+.+++|+.++..+++++    ++.     +.++||++||.+.+..    ....++.
T Consensus        78 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~SS~~~~g~----~~~~~~~  142 (341)
T 3enk_A           78 PITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVM----RER-----AVKRIVFSSSATVYGV----PERSPID  142 (341)
T ss_dssp             CCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHH----HHT-----TCCEEEEEEEGGGBCS----CSSSSBC
T ss_pred             CCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHH----HhC-----CCCEEEEEecceEecC----CCCCCCC
Confidence            79999999997432  1233445678999999988876654    332     3469999999665421    1223355


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +..+..+...|+.+|.+.+.+++.++.++.  +  ++++.++|+.+.+|..
T Consensus       143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          143 ETFPLSATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAHE  189 (341)
T ss_dssp             TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCCT
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCcc
Confidence            666777788999999999999999998875  4  7888899999988743

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.89  E-value=1e-22  Score=172.15  Aligned_cols=163  Identities=19%  Similarity=0.223  Sum_probs=124.7

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCce-eEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v-~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...++|++++||||+|+||++++++|+++|++|++++|+.+..+...+        .++ .++.+|++         +.+
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~~   78 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------EDF   78 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SCC
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HHH
Confidence            356889999999999999999999999999999999999887554322        257 88999999         233


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+.++++|+||||||...      .++++..+++|+.++..+++++...         +.++||++||.++...      
T Consensus        79 ~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~------  137 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR---------GIKRFIMVSSVGTVDP------  137 (236)
T ss_dssp             GGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH---------TCCEEEEECCTTCSCG------
T ss_pred             HHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc---------CCCEEEEEecCCCCCC------
Confidence            444568999999999643      2567889999999999998887332         3569999999654431      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                           .. ..+....|+.+|++++.+++       ..|  +++++|+||.+.++...
T Consensus       138 -----~~-~~~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~  179 (236)
T 3e8x_A          138 -----DQ-GPMNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEEST  179 (236)
T ss_dssp             -----GG-SCGGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCC
T ss_pred             -----CC-ChhhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCC
Confidence                 00 01467789999999888765       456  89999999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=1.5e-22  Score=179.77  Aligned_cols=188  Identities=16%  Similarity=0.077  Sum_probs=141.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |+++++|||||+|+||.+++++|++.|++|++++|+......  +.+.+.....++.++.+|++|.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            467899999999999999999999999999999998765321  12222111246888999999999999998876    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+||||||...  .+.+.++++..+++|+.++..+++++.+. .       ..++||++||.+.+.. .   ...++
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-------~~~~iv~~SS~~vyg~-~---~~~~~  139 (345)
T 2z1m_A           75 -QPDEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILEALRTV-K-------PDTKFYQASTSEMFGK-V---QEIPQ  139 (345)
T ss_dssp             -CCSEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C-------TTCEEEEEEEGGGGCS-C---SSSSB
T ss_pred             -CCCEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C-------CCceEEEEechhhcCC-C---CCCCC
Confidence             7899999999643  22345678889999999999999998753 1       1369999999765421 1   11234


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLK---EDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~---~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .+..+..+...|+.+|++.+.+++.++.++.   ..+  +.++.+.||...|++
T Consensus       140 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          140 TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFV  191 (345)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSH
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcch
Confidence            5555667778999999999999999998875   222  556777888776654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=1.9e-22  Score=180.51  Aligned_cols=189  Identities=18%  Similarity=0.124  Sum_probs=147.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++++|||||+|+||.+++++|++.|++|++++|+........+.+. .  ..++.++.+|++|++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-V--ADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-T--TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-c--CCceEEEEccccCHHHHHHHHHhc----
Confidence            567899999999999999999999999999999998765544333321 1  346889999999999999998876    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+||||||..  ..+.+.+++...+++|+.++..+++++.+.  .      ..++||++||...+.....   ..++
T Consensus        80 -~~d~vih~A~~~--~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~------~~~~~v~~SS~~vyg~~~~---~~~~  145 (357)
T 1rkx_A           80 -QPEIVFHMAAQP--LVRLSYSEPVETYSTNVMGTVYLLEAIRHV--G------GVKAVVNITSDKCYDNKEW---IWGY  145 (357)
T ss_dssp             -CCSEEEECCSCC--CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--C------CCCEEEEECCGGGBCCCCS---SSCB
T ss_pred             -CCCEEEECCCCc--ccccchhCHHHHHHHHHHHHHHHHHHHHHh--C------CCCeEEEecCHHHhCCCCc---CCCC
Confidence             789999999952  123345677889999999999999998653  1      2469999999765432110   0123


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhc------cCCCcEEEEEeeCCccccCcc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLK------EDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~------~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .++.+..+...|+.+|.+.+.+++.++.++.      +.|  ++++.|+||.+.+|..
T Consensus       146 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          146 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGD  201 (357)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCC
Confidence            4444556678899999999999999999884      346  8999999999999864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.89  E-value=2.3e-22  Score=179.70  Aligned_cols=170  Identities=16%  Similarity=0.152  Sum_probs=139.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHc-CC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALR-GV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~-G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++|++|||||+|+||++++++|++. |+ +|++++|+........+++.    ..++.++.+|++|.+++.++++   
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT---
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh---
Confidence            478899999999999999999999999 98 99999999877665554442    3478999999999988887764   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+|||+||.....  ....+..+.+++|+.++..+++++.+.         +.++||++||..+.         
T Consensus        91 ----~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~---------~v~~~V~~SS~~~~---------  146 (344)
T 2gn4_A           91 ----GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKN---------AISQVIALSTDKAA---------  146 (344)
T ss_dssp             ----TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGS---------
T ss_pred             ----cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhC---------CCCEEEEecCCccC---------
Confidence                689999999965321  123445678999999999999998764         24699999996543         


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                               .+...|+++|++.+.+++.++.+++..|  +++++|+||.+.++.
T Consensus       147 ---------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          147 ---------NPINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSR  189 (344)
T ss_dssp             ---------SCCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCT
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCC
Confidence                     2356899999999999999998887778  899999999999975

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.89  E-value=1.6e-21  Score=173.39  Aligned_cols=186  Identities=16%  Similarity=0.135  Sum_probs=142.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++|||||+|+||++++++|++.|++|++++|+. .......+.+..   ..++.++.+|++|+++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5899999999999999999999999999999853 222333334432   235888999999999999988863     6


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc-----
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-----  185 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-----  185 (282)
                      +|+||||||....  +.+.++++..+++|+.++..+++++.+...        +++||++||.+.+.. ....++     
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~-~~~~~~~e~~~  142 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGD-LEQYKYNETET  142 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTT-CTTSCEEECSS
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCC-CCcCCcccccc
Confidence            8999999996432  234567788999999999999999877642        359999999765432 111111     


Q ss_pred             --------cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 --------DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 --------~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                              ..+.++.+..+...|+.+|.+.+.+++.++.++   |  +++++|+||.+.+|...
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCC
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCC
Confidence                    123444556677899999999999999998886   5  89999999999999754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=7e-23  Score=173.51  Aligned_cols=159  Identities=15%  Similarity=0.080  Sum_probs=124.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .|++++++||||+||||++++++|++.|+  +|++++|+........        ..++.++.+|++|++++.++++   
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS---
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc---
Confidence            36789999999999999999999999999  9999999876533211        1257889999999988777654   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+||||||...     ...+++..+++|+.++..+++++.    +.     +.++||++||.+++.        
T Consensus        84 ----~~d~vi~~ag~~~-----~~~~~~~~~~~n~~~~~~~~~~~~----~~-----~~~~iv~~SS~~~~~--------  137 (242)
T 2bka_A           84 ----GHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAK----AG-----GCKHFNLLSSKGADK--------  137 (242)
T ss_dssp             ----SCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHH----HT-----TCCEEEEECCTTCCT--------
T ss_pred             ----CCCEEEECCCccc-----ccCCcccceeeeHHHHHHHHHHHH----HC-----CCCEEEEEccCcCCC--------
Confidence                6899999999632     123467889999999888877643    32     357999999976542        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDI-TANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i-~v~~v~Pg~v~t~~~~  241 (282)
                               +....|+++|++++.+++.+       +  + ++++|+||.+.||...
T Consensus       138 ---------~~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          138 ---------SSNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             ---------TCSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGG
T ss_pred             ---------CCcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCC
Confidence                     23457999999988887643       3  5 7899999999999754

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=2.9e-22  Score=179.01  Aligned_cols=199  Identities=14%  Similarity=0.045  Sum_probs=148.2

Q ss_pred             CCCcccccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC---CCceeEEEccCCC
Q 023438           17 SSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSS   93 (282)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~   93 (282)
                      +.........++++++++|||||+|+||.+++++|++.|++|++++|+.....+..+++.+...   ..++.++.+|++|
T Consensus        13 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   92 (352)
T 1sb8_A           13 MSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN   92 (352)
T ss_dssp             CCHHHHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS
T ss_pred             HHHHHhhchhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC
Confidence            3333333334557789999999999999999999999999999999976432222333322221   1368899999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      .+++.++++       ++|+|||+||....  ..+.++++..+++|+.++..+++++.+.         +.++||++||.
T Consensus        93 ~~~~~~~~~-------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~  154 (352)
T 1sb8_A           93 LDDCNNACA-------GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASS  154 (352)
T ss_dssp             HHHHHHHHT-------TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEG
T ss_pred             HHHHHHHhc-------CCCEEEECCcccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccH
Confidence            998888766       68999999996432  1244677889999999999999888642         24699999997


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++...    ...++.++.+..+...|+.+|.+.+.+++.++.++   |  ++++.|+||.+.+|....
T Consensus       155 ~~~~~~----~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  214 (352)
T 1sb8_A          155 STYGDH----PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDP  214 (352)
T ss_dssp             GGGTTC----CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCC
T ss_pred             HhcCCC----CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCC
Confidence            665321    11234455555667899999999999999998876   4  788889999999997653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.88  E-value=1.5e-21  Score=172.00  Aligned_cols=180  Identities=17%  Similarity=0.139  Sum_probs=141.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      -+.+++|||||+|+||.+++++|++.|++|++++|+... ..    +       ++.++.+|++|++++.++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----
Confidence            356899999999999999999999999999999998654 11    1       578899999999999998876     


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +++|+||||||....  +.+.+++...+++|+.++..+++++ +.+.       +.++||++||.+.+....  ....++
T Consensus        73 ~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------~~~~iv~~SS~~v~g~~~--~~~~~~  140 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------LDCRILTIGSSEEYGMIL--PEESPV  140 (321)
T ss_dssp             HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------CCCEEEEEEEGGGTBSCC--GGGCSB
T ss_pred             cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------CCCeEEEEccHHhcCCCC--CCCCCC
Confidence            378999999996432  2344567889999999999999998 4442       256999999976543210  012345


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .++.+.++...|+.+|++.+.+++.++.++   |  ++++.++|+.+.+|....
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~  189 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSL  189 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCT
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCC
Confidence            566666778899999999999999998875   5  889999999999998654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=4.5e-21  Score=173.82  Aligned_cols=188  Identities=15%  Similarity=0.078  Sum_probs=140.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHH-HcCCEEEEEEcChhh---------HHHHHHHHHHhCC---CCc---eeEEEccCCCH
Q 023438           31 GLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAA---------GKDVKETIVKEIP---SAK---VDAMELDLSSL   94 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~-~~G~~Vii~~r~~~~---------~~~~~~~l~~~~~---~~~---v~~~~~Dvs~~   94 (282)
                      ++++|||||+|+||.+++++|+ +.|++|++++|+...         .+...+.+.+...   ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999987654         2333222222211   114   88999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +++.+++++    ++++|+||||||....  ..+.++++..+++|+.++..+++++..    .     +.++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-----~~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLL----H-----KCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHH----T-----TCCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc--CcchhhHHHHHHHHhHHHHHHHHHHHH----h-----CCCEEEEECCHH
Confidence            998888764    4569999999996432  124466788999999999999887533    2     346999999965


Q ss_pred             ccccccCC----ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          175 HRLAYHEG----IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       175 ~~~~~~~~----~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .+.. ...    ....++.++.+..+...|+.+|++.+.+++.++.++   |  +++++++|+.+.+|.
T Consensus       147 v~g~-~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IFGN-PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             GTBS-CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             HhCC-CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence            4421 110    002345555566667899999999999999999887   5  899999999998885

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=1.2e-20  Score=171.24  Aligned_cols=190  Identities=12%  Similarity=0.077  Sum_probs=138.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH----------------HHHHHHHHhCCCCceeEEEcc
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK----------------DVKETIVKEIPSAKVDAMELD   90 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~----------------~~~~~l~~~~~~~~v~~~~~D   90 (282)
                      ..-++.++|||||+|+||.+++++|++.|++|++++|......                +..+++.+.. +.++.++.+|
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~D   85 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGD   85 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESC
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECC
Confidence            3456889999999999999999999999999999998754321                1122221111 3468899999


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEE
Q 023438           91 LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (282)
Q Consensus        91 vs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~  169 (282)
                      ++|.+++.++++.+     ++|+||||||.... ....+++++...+++|+.++..+++++.+..        ...+||+
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~~~~~V~  152 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG--------EECHLVK  152 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC--------TTCEEEE
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC--------CCcEEEE
Confidence            99999999988875     68999999996532 1123556667789999999999998886531        1249999


Q ss_pred             EcCCcccccccCCccccCCCCC--------------CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 023438          170 VSSEGHRLAYHEGIRFDKINDP--------------SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI  235 (282)
Q Consensus       170 vsS~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v  235 (282)
                      +||.+.+.. ..    .++.+.              .+..+...|+.+|.+.+.+++.++.++   |  +++++|+||.+
T Consensus       153 ~SS~~vyg~-~~----~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v  222 (404)
T 1i24_A          153 LGTMGEYGT-PN----IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVV  222 (404)
T ss_dssp             ECCGGGGCC-CS----SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEE
T ss_pred             eCcHHHhCC-CC----CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEeccee
Confidence            999755431 11    112211              244556789999999999999988876   5  89999999999


Q ss_pred             ccCcc
Q 023438          236 ATNII  240 (282)
Q Consensus       236 ~t~~~  240 (282)
                      .+|..
T Consensus       223 ~Gp~~  227 (404)
T 1i24_A          223 YGVKT  227 (404)
T ss_dssp             ECSCC
T ss_pred             eCCCC
Confidence            99865

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=2e-21  Score=172.73  Aligned_cols=191  Identities=11%  Similarity=0.018  Sum_probs=145.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHH-HcCCEEEEEEcChhhH------------HHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAG------------KDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~-~~G~~Vii~~r~~~~~------------~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ...+|++||||||+|||+|++..|+ ..|++++++++..+..            ....+.+.+.  +.+...+.||++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCH
Confidence            4567999999999999999999999 7899999998765432            2333445454  67899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCCC--CC----------------------------------cCChhhHHHHHHH
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMGT--PF----------------------------------MLSKDNIELQFAT  138 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~~--~~----------------------------------~~~~~~~~~~~~~  138 (282)
                      ++++++++++++++|++|+||||++....  +.                                  -.+.++++....+
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            99999999999999999999999996411  00                                  0133444444443


Q ss_pred             ---HHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHH
Q 023438          139 ---NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELA  215 (282)
Q Consensus       139 ---n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la  215 (282)
                         ..++.+..++...++|.+       +++++.+|+.+....             .|.+..+.++++|+++++.++.|+
T Consensus       205 Mg~s~~s~w~~al~~a~lla~-------G~siva~SYiGse~t-------------~P~Y~~G~mG~AKaaLEa~~r~La  264 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLEE-------GCITLAYSYIGPEAT-------------QALYRKGTIGKAKEHLEATAHRLN  264 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEE-------EEEEEEEECCCCGGG-------------HHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHhhhcccC-------CceEEEEeccCccee-------------ecCCCccHHHHHHHHHHHHHHHHH
Confidence               445555556555555543       689999999776542             022234578999999999999999


Q ss_pred             HHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          216 RRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       216 ~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      .++++    +++|.+++|.+.|......+
T Consensus       265 ~eL~~----~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          265 KENPS----IRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             HHCTT----EEEEEEECCCCCCTTGGGSS
T ss_pred             HhcCC----CcEEEEEcCccccchhhcCC
Confidence            99974    89999999999999877654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.87  E-value=1.2e-21  Score=173.61  Aligned_cols=182  Identities=14%  Similarity=0.084  Sum_probs=139.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChh--hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++++|||||+|+||.+++++|++.|  ++|++++|+..  ..+. .+++.   ...++.++.+|++|.+++.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE---DDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc---cCCceEEEEcCCCCHHHHHHHhh---
Confidence            45689999999999999999999997  89999998642  1111 11111   13468899999999999888872   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+||||||...  .+.+.++++..+++|+.++..+++++.+.  .      ..++||++||.+.+.. ..   .
T Consensus        75 ----~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~-~~---~  136 (336)
T 2hun_A           75 ----KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLESIRRE--N------PEVRFVHVSTDEVYGD-IL---K  136 (336)
T ss_dssp             ----TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------TTSEEEEEEEGGGGCC-CS---S
T ss_pred             ----CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCcEEEEeccHHHHCC-CC---C
Confidence                7899999999643  12345667889999999999999998876  1      2369999999764321 11   1


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.++.+..+...|+.+|++.+.+++.++.++   |  ++++.++|+.+.+|...
T Consensus       137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          137 GSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQF  187 (336)
T ss_dssp             SCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCC
Confidence            234455566677899999999999999998875   5  88999999999999854

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=6.7e-22  Score=176.43  Aligned_cols=195  Identities=15%  Similarity=0.043  Sum_probs=149.8

Q ss_pred             cccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC---CceeEEEccCCCHHHHH
Q 023438           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELDLSSLASVR   98 (282)
Q Consensus        22 ~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~---~~v~~~~~Dvs~~~~i~   98 (282)
                      +....+.++++++|||||+|+||.+++++|++.|++|++++|+........+.+....+.   .++.++.+|++|.+++.
T Consensus        16 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   95 (351)
T 3ruf_A           16 EITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCE   95 (351)
T ss_dssp             HHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHH
T ss_pred             hHHhhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence            333345678899999999999999999999999999999999876655555555443211   46899999999999888


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus        99 ~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++++       ++|+|||+||....  ..+.+++...+++|+.++..+++++...         +-.++|++||.+.+..
T Consensus        96 ~~~~-------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vyg~  157 (351)
T 3ruf_A           96 QVMK-------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA---------QVQSFTYAASSSTYGD  157 (351)
T ss_dssp             HHTT-------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTT
T ss_pred             HHhc-------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEecHHhcCC
Confidence            7766       68999999996432  2345667788999999999888877443         2459999999765432


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          ....++.++.+..+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.+|.....
T Consensus       158 ----~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~  213 (351)
T 3ruf_A          158 ----HPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDPN  213 (351)
T ss_dssp             ----CCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCCC
T ss_pred             ----CCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCCC
Confidence                112345556666677899999999999999988876   4  7778899999999875543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.87  E-value=2.8e-21  Score=172.94  Aligned_cols=193  Identities=15%  Similarity=0.097  Sum_probs=143.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChh--hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++|||||+|+||.+++++|++. |++|++++|+..  ..+. .+++.   ...++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 799999998642  1111 11111   1346889999999999999988763     


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC------Cc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE------GI  183 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~------~~  183 (282)
                      ++|+||||||...  .+.+.+++++.+++|+.++..+++++.+.+.......+++++||++||.+.+.....      ..
T Consensus        73 ~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            7999999999643  223456778899999999999999999987531000001259999999754321100      00


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+.++.++.+..+...|+.+|++.+.+++.++.++   |  ++++.|+||.+.+|...
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCC
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCC
Confidence            11145556666778899999999999999999886   4  78899999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.86  E-value=1.1e-20  Score=168.28  Aligned_cols=184  Identities=16%  Similarity=0.118  Sum_probs=136.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh------HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++++|||||+|+||.+++++|++.|++|++++|+...      ..+..+++.+.. +.++.++.+|++|.+++.++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            4789999999999999999999999999999986433      223333333211 346889999999999998888762


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                           ++|+|||+||....  ..+.+++.+.+++|+.++..+++++.    +.     +.++||++||.+.+.. .   .
T Consensus        81 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-----~~~~iv~~SS~~~~g~-~---~  140 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMK----AH-----GVKNLVFSSSATVYGN-P---Q  140 (348)
T ss_dssp             -----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHH----HT-----TCCEEEEEEEGGGGCS-C---S
T ss_pred             -----CCCEEEECCCCcCc--cchhhchHHHHHHHHHHHHHHHHHHH----Hh-----CCCEEEEECcHHHhCC-C---C
Confidence                 79999999996432  11345677889999999999888653    22     3469999999665431 1   1


Q ss_pred             ccCCCCCCCCCC-CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          185 FDKINDPSGYNG-FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       185 ~~~~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ..++.++.+..+ ...|+.+|++.+.+++.++.+  ..+  +++..++|+.+.+|.
T Consensus       141 ~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~--~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          141 YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKT--WNAVLLRYFNPTGAH  192 (348)
T ss_dssp             SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTT--CEEEEEEECEEECCC
T ss_pred             CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCC--cceEEEeeccccCCC
Confidence            123444444433 678999999999999999887  234  788889999998773

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=2.8e-21  Score=171.29  Aligned_cols=162  Identities=15%  Similarity=0.156  Sum_probs=120.8

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ....+++++++|||||+|+||.+++++|++.|++|++++|+.....+..+    ..  .++.++.+|++|.+++.+++++
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~l--~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----PV--AGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC----SC--TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh----cc--CCceEEEeeCCCHHHHHHHHhh
Confidence            34577889999999999999999999999999999999997543221111    11  3688899999999999999887


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +     ++|+||||||.....   +.++++  +++|+.++..+++++...         +.++||++||.+++.. ....
T Consensus        87 ~-----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~~~-~~~~  146 (330)
T 2pzm_A           87 F-----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---------GVKRLLNFQTALCYGR-PATV  146 (330)
T ss_dssp             H-----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---------TCSEEEEEEEGGGGCS-CSSS
T ss_pred             c-----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---------CCCEEEEecCHHHhCC-CccC
Confidence            6     789999999975432   445565  999999999999988732         3469999999765431 1100


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHH
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANEL  214 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~l  214 (282)
                       ..++.++.  .+...|+.+|++.+.+++.+
T Consensus       147 -~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          147 -PIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             -SBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             -CCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence             00222222  35678999999999888776

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=7.4e-21  Score=169.06  Aligned_cols=188  Identities=19%  Similarity=0.144  Sum_probs=139.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcC-------CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRG-------VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   98 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G-------~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~   98 (282)
                      ++.++++++|||||+|+||.+++++|++.|       ++|++++|+......        ....++.++.+|++|++++.
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~   80 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAE   80 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHH
Confidence            456889999999999999999999999999       899999998643221        01346889999999999988


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus        99 ~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++++      +++|+||||||...   ..+.+++.+.+++|+.++..+++++.+...+.    ++.++||++||.+++..
T Consensus        81 ~~~~------~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~----~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           81 KLVE------ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFDAIRIANGKD----GYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HHHH------TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGCCS
T ss_pred             HHHh------cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHHHHHhccccc----CCCcEEEEeCchHhhCC
Confidence            8775      37999999999643   23456788899999999999999887754321    01369999999765432


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEee--CCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVH--PGAIATN  238 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~--Pg~v~t~  238 (282)
                      .    ...++.++.+..+...|+.+|++.+.+++.++.+..-....+|++.|.  ||.+.++
T Consensus       148 ~----~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          148 P----LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             S----CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             C----CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence            1    113455566666778999999999999988877642111125666666  7765443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.85  E-value=6.5e-21  Score=167.23  Aligned_cols=174  Identities=18%  Similarity=0.177  Sum_probs=136.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+........        ...+.++.+|++|.+ +.+.++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999765432211        346889999999976 544332       3 


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||...  ...+.+++...+++|+.++..+++++...         +.++||++||.+.+..    ....++.++
T Consensus        64 d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~vyg~----~~~~~~~e~  128 (312)
T 3ko8_A           64 DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT---------GVRTVVFASSSTVYGD----ADVIPTPEE  128 (312)
T ss_dssp             SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCS----CSSSSBCTT
T ss_pred             CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeCcHHHhCC----CCCCCCCCC
Confidence            99999999532  24466778889999999999999887432         3459999999765432    122345566


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.++||.+.+|....
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~  174 (312)
T 3ko8_A          129 EPYKPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRH  174 (312)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCS
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCC
Confidence            677778899999999999999999887   5  899999999999997654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=3.7e-20  Score=166.32  Aligned_cols=188  Identities=15%  Similarity=0.048  Sum_probs=133.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH-HHHHHHHHhC--CCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~-~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|||||+|+||.+++++|++.|++|++++|+..... +..+++.+..  .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999865421 1122221110  1246888999999999999998876   


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                        ++|+||||||....  ..+.+++...+++|+.++..+++++.+...+      +.++||++||.+.+...    ...+
T Consensus        78 --~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~SS~~v~g~~----~~~~  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGLV----QEIP  143 (372)
T ss_dssp             --CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTTC----CSSS
T ss_pred             --CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEeCChhhhCCC----CCCC
Confidence              68999999996533  2355677888999999999999988765321      13699999997654321    1123


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +.++.+..+...|+.+|++.+.+++.++.++.     +.+..+.|..+..|..
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~~  191 (372)
T 1db3_A          144 QKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRR  191 (372)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTS
T ss_pred             CCccCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCCC
Confidence            45555666678999999999999999998764     3444466766666543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.85  E-value=8.8e-21  Score=168.83  Aligned_cols=190  Identities=12%  Similarity=0.072  Sum_probs=136.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +.++++++|||||+|+||.+++++|++.|  ++|+..+|......  .+.+.......++.++.+|++|.+++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            45678999999999999999999999999  67888777642111  111212122347899999999999999998874


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                           ++|+|||+||....  ....+++...+++|+.++..+++++...         +..+||++||...+....   .
T Consensus        98 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vy~~~~---~  158 (346)
T 4egb_A           98 -----DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLG---K  158 (346)
T ss_dssp             -----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS---------TTSEEEEEEEGGGGCCCC---S
T ss_pred             -----CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeCchHHhCCCC---c
Confidence                 68999999997533  2255667788999999998888877543         245899999976543211   1


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..++.++.+..+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.+|....
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  211 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYP  211 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCT
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCc
Confidence            2345566667777899999999999999988875   4  778889999999987643

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.85  E-value=3.7e-21  Score=172.57  Aligned_cols=183  Identities=15%  Similarity=0.053  Sum_probs=134.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHH--cCCEEEEEEcChhhHHHHH------HHHHHhCCCCceeEEEccCCCHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLAL--RGVHVVMGVRDIAAGKDVK------ETIVKEIPSAKVDAMELDLSSLASV   97 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~--~G~~Vii~~r~~~~~~~~~------~~l~~~~~~~~v~~~~~Dvs~~~~i   97 (282)
                      .++++++++|||||+|+||.+++++|++  .|++|++++|+........      ... ....+.++.++.+|++|++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF-KNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG-GGGTTCCSEEEECCTTCHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh-hhccccCceEEECCCCCHHHH
Confidence            4678899999999999999999999999  9999999999764211000      000 011234678999999999988


Q ss_pred             HHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438           98 RNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus        98 ~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +.+      ...++|+||||||...    .+.++++..+++|+.++..+++++.    +      .+.+||++||.+.+.
T Consensus        84 ~~~------~~~~~D~vih~A~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~----~------~~~~~V~~SS~~vyg  143 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD----TTMLNQELVMKTNYQAFLNLLEIAR----S------KKAKVIYASSAGVYG  143 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG----GGCCCHHHHHHHHTHHHHHHHHHHH----H------TTCEEEEEEEGGGGC
T ss_pred             HHh------hccCCCEEEECCccCC----ccccCHHHHHHHHHHHHHHHHHHHH----H------cCCcEEEeCcHHHhC
Confidence            876      2348999999999542    2556788899999999999998873    2      134699999955432


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      . ..    .++.++.+..+...|+.+|.+.+.+++.++.+       +++..|+|+.+.+|...
T Consensus       144 ~-~~----~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          144 N-TK----APNVVGKNESPENVYGFSKLCMDEFVLSHSND-------NVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             S-CC----SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-------SCEEEEEECSEESTTCG
T ss_pred             C-CC----CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-------CCEEEEEeCceeCcCCC
Confidence            1 11    14555666677788999999988888877665       34455888888877654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=1.9e-21  Score=208.80  Aligned_cols=175  Identities=19%  Similarity=0.153  Sum_probs=134.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhH---HHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAG---KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~---~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+....   .+..+++.+.  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999996 88889986554   3344444433  5678999999999999999999987


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                       .+|++|+||||||+..  .+.+.+.++|++.+++|+.|++++.+++.+.+.+       .++||++||.++..      
T Consensus      1961 -~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~------ 2026 (2512)
T 2vz8_A         1961 -QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGR------ 2026 (2512)
T ss_dssp             -HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHT------
T ss_pred             -hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcC------
Confidence             4789999999999753  3667899999999999999999999999998764       37999999988876      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI  235 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v  235 (282)
                               +.+++..|+++|+++.+|++.++.+    |  +...++..|.+
T Consensus      2027 ---------g~~g~~~Y~aaKaal~~l~~~rr~~----G--l~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2027 ---------GNAGQANYGFANSAMERICEKRRHD----G--LPGLAVQWGAI 2063 (2512)
T ss_dssp             ---------TCTTCHHHHHHHHHHHHHHHHHHHT----T--SCCCEEEECCB
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHC----C--CcEEEEEccCc
Confidence                     5788999999999999999976654    3  33344555443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.85  E-value=2.2e-20  Score=166.29  Aligned_cols=171  Identities=13%  Similarity=0.058  Sum_probs=132.1

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...+.++++||||||+|+||.+++++|++.|++|++++|+...              .++.++.+|++|.+++.++++  
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh--
Confidence            3456788999999999999999999999999999999998653              357889999999998888776  


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                           ++|+|||+|+...    .+..+++..+++|+.++..+++++..    .     +.++||++||...+...  ...
T Consensus        77 -----~~d~vih~A~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~-----~~~~~V~~SS~~vyg~~--~~~  136 (347)
T 4id9_A           77 -----GVSAVLHLGAFMS----WAPADRDRMFAVNVEGTRRLLDAASA----A-----GVRRFVFASSGEVYPEN--RPE  136 (347)
T ss_dssp             -----TCSEEEECCCCCC----SSGGGHHHHHHHHTHHHHHHHHHHHH----T-----TCSEEEEEEEGGGTTTT--SCS
T ss_pred             -----CCCEEEECCcccC----cchhhHHHHHHHHHHHHHHHHHHHHH----c-----CCCeEEEECCHHHhCCC--CCC
Confidence                 6899999999643    24455588999999999888888744    2     34699999996554321  012


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  236 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  236 (282)
                      ..++.+..+..+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.
T Consensus       137 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~  183 (347)
T 4id9_A          137 FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQ  183 (347)
T ss_dssp             SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEE
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEe
Confidence            2346666677778899999999999999888774   5  788889999998

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.85  E-value=1.8e-20  Score=166.38  Aligned_cols=186  Identities=20%  Similarity=0.122  Sum_probs=130.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC--CceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++|||||+|+||++++++|++.|++|+++.|+....... +.+.+ .+.  .++.++.+|++|.+++.++++    
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLD-LPKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHT-STTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHh-cccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            4679999999999999999999999999999999987643322 12211 111  257889999999998887765    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         .+|+|||+|+... .  ...+.....+++|+.++..+++++.+..        ..++||++||.+++.+.....  .
T Consensus        77 ---~~d~Vih~A~~~~-~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~riV~~SS~~~~~~~~~~~--~  140 (337)
T 2c29_D           77 ---GCTGVFHVATPMD-F--ESKDPENEVIKPTIEGMLGIMKSCAAAK--------TVRRLVFTSSAGTVNIQEHQL--P  140 (337)
T ss_dssp             ---TCSEEEECCCCCC-S--SCSSHHHHTHHHHHHHHHHHHHHHHHHS--------CCCEEEEECCGGGTSCSSSCC--S
T ss_pred             ---CCCEEEEeccccC-C--CCCChHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEeeeHhhcccCCCCC--c
Confidence               5799999998542 1  1222335679999999999999887642        136999999987654321100  0


Q ss_pred             CCCCCCCC---------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGY---------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~---------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+.+....         +....|+.+|.+.+.++..++.+.   |  +++++|+|+.+.+|...
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          141 VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---N--IDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSC
T ss_pred             ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCC
Confidence            11222111         123469999999888877766543   5  88899999999999754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.85  E-value=1.5e-20  Score=165.04  Aligned_cols=179  Identities=18%  Similarity=0.166  Sum_probs=135.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|+||++++++|++.|++|++++|.......       .. ..++.++.+|++|++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------NV-PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------GS-CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------hc-ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999999985432111       11 125778899999999999888753     689


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....  ..+.+++...+++|+.+++.+++++..    .     +.++||++||.++.++..  ....++.+..
T Consensus        69 ~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~----~-----~~~~iv~~SS~~~~~g~~--~~~~~~~E~~  135 (311)
T 2p5y_A           69 HVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQ----Y-----GVEKLVFASTGGAIYGEV--PEGERAEETW  135 (311)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-----TCSEEEEEEEHHHHHCCC--CTTCCBCTTS
T ss_pred             EEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----h-----CCCEEEEeCCChhhcCCC--CCCCCcCCCC
Confidence            99999996432  234567788999999999999988753    1     246999999973333210  0111234444


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..+...|+.+|++.+.+++.++.++   |  ++++.++|+.+.+|....
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~  180 (311)
T 2p5y_A          136 PPRPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDP  180 (311)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCS
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCC
Confidence            55567789999999999999998875   4  788899999999997543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.84  E-value=1.9e-20  Score=158.92  Aligned_cols=167  Identities=14%  Similarity=0.052  Sum_probs=124.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++++||||+|+||++++++|++.  |++|++++|+......    +     ..++.++.+|++|++++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~-----~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c-----CCCeeEEEecCCCHHHHHHHHc----
Confidence            45789999999999999999999999  8999999998755432    1     2357889999999999888875    


Q ss_pred             cCCCccEEEEcCCCCCCC-----------CcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          107 QHHQLNILINNAGIMGTP-----------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                         ++|+||||||.....           .+...++++..+++|+.++..+++++.+.         +.++||++||..+
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~  136 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGG  136 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------CCCEEEEEcCccC
Confidence               589999999964320           12233445578899999988888776432         2469999999765


Q ss_pred             cccccCCccccCCCCCCCCCC--CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNG--FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~--~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ...            ..+...  ...|+.+|.+++.+++.       .|  +++++|+||.+.++...
T Consensus       137 ~~~------------~~~~~~~~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          137 TNP------------DHPLNKLGNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             TCT------------TCGGGGGGGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSS
T ss_pred             CCC------------CCccccccchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcc
Confidence            421            001111  13477799998877642       56  88999999999998643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=8.2e-20  Score=164.80  Aligned_cols=185  Identities=14%  Similarity=0.031  Sum_probs=136.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-----HHHHHHHHHHhCCCC-ceeEEEccCCCHHHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-----~~~~~~~l~~~~~~~-~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+...     ++...+.+...  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22211111111  12 6888999999999999998876 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+|||+||....  ..+.+++...+++|+.++..+++++.+...+.    +++++||++||.+.+... ..   
T Consensus       106 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~----~~~~~~v~~SS~~vyg~~-~~---  171 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGST-PP---  171 (381)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTS-CS---
T ss_pred             ----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc----CCccEEEEeCcHHHhCCC-CC---
Confidence                78999999996432  23456788899999999999999999987653    124699999997654321 11   


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                       ++.++.+..+...|+.+|.+.+.+++.++.++.     +.+..+.|..+..|.
T Consensus       172 -~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~~r~~~~~gp~  219 (381)
T 1n7h_A          172 -PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG-----LFACNGILFNHESPR  219 (381)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTT
T ss_pred             -CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-----CcEEEEEeCceeCCC
Confidence             345555666778999999999999999988763     333334555444443

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.84  E-value=3.2e-20  Score=155.18  Aligned_cols=143  Identities=12%  Similarity=0.108  Sum_probs=114.1

Q ss_pred             CEEEEecCCChhHHHHHHHHH-HcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~-~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      |+++||||+|+||++++++|+ +.|++|++++|+.+ .+++..    ..  ..++.++.+|++|+++++++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999977 544432    12  4578999999999999988875       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+||||||..                 |+.     ++.+++.+++.     +.++||++||..++..           
T Consensus        73 ~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~-----~~~~iv~iSs~~~~~~-----------  114 (221)
T 3r6d_A           73 NAEVVFVGAMES-----------------GSD-----MASIVKALSRX-----NIRRVIGVSMAGLSGE-----------  114 (221)
T ss_dssp             TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHT-----TCCEEEEEEETTTTSC-----------
T ss_pred             CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhc-----CCCeEEEEeeceecCC-----------
Confidence            679999999952                 222     78888888874     4579999999776542           


Q ss_pred             CCCCCCCC---------c-cchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          190 DPSGYNGF---------R-AYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       190 ~~~~~~~~---------~-~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                          .+..         . .|+.+|.+++.+++.       .|  +++++|+||++.++
T Consensus       115 ----~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          115 ----FPVALEKWTFDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYND  160 (221)
T ss_dssp             ----SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECC
T ss_pred             ----CCcccccccccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCC
Confidence                2222         2 799999998876642       56  89999999999988

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.84  E-value=5.1e-20  Score=163.92  Aligned_cols=182  Identities=20%  Similarity=0.156  Sum_probs=138.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++|||||+|+||.+++++|++.  |++|++++|+... ..+..+    .....++.++.+|++|++++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE----AILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG----GGCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh----hhccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999996421 111111    1113468899999999998888776      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC-------
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-------  181 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  181 (282)
                       .+|+|||+||....  +.+.++++..+++|+.++..+++++.+.          +.+||++||.+.+.....       
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCccccccccc
Confidence             35999999996431  2344667889999999999999988765          139999999765421100       


Q ss_pred             -CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          182 -GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       182 -~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                       .....++.++.+..+...|+.+|.+.+.+++.++.++   |  ++++.++||.+.+|...
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQH  197 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCC
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCC
Confidence             0111345566666777899999999999999998876   4  88999999999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=8.7e-20  Score=161.56  Aligned_cols=185  Identities=16%  Similarity=0.042  Sum_probs=137.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH-HHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~-~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++++|||||+|+||.+++++|++.|++|++++|+..... ...+.+.   ...++.++.+|++|.+++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            4689999999999999999999999999999999865421 1111111   1346889999999999999998876    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+|||+||....  ..+.+++...+++|+.++..+++++.+.-        ..++||++||.+.+.. .   ...++
T Consensus        86 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--------~~~~~v~~SS~~v~g~-~---~~~~~  150 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFS--------PETRFYQASTSEMFGL-I---QAERQ  150 (335)
T ss_dssp             -CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHC--------TTSEEEEEEEGGGGCS-C---SSSSB
T ss_pred             -CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEeCHHHhCC-C---CCCCC
Confidence             78999999996432  22345677889999999999998875531        1369999999655432 1   11234


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.+..+...|+.+|.+.+.+++.++.++   +  +.+..++|+.+.+|...
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~r~~~v~Gp~~~  198 (335)
T 1rpn_A          151 DENTPFYPRSPYGVAKLYGHWITVNYRESF---G--LHASSGILFNHESPLRG  198 (335)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTSC
T ss_pred             CcccCCCCCChhHHHHHHHHHHHHHHHHHc---C--CcEEEEeeCcccCCCCC
Confidence            555556667789999999999999988776   3  55566899988887643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=8.2e-20  Score=161.41  Aligned_cols=175  Identities=15%  Similarity=0.118  Sum_probs=135.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+.....       +.. ..++.++.+|++|.+++.++++.     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GGS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hhc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            68999999999999999999999999999998754322       111 12688899999999999888875     379


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||....  ..+.+++...+++|+.++..+++++..    .     +.+++|++||.+.+.. .   ...++.++
T Consensus        69 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~-----~~~~~v~~Ss~~~~~~-~---~~~~~~E~  133 (330)
T 2c20_A           69 EAVMHFAADSLV--GVSMEKPLQYYNNNVYGALCLLEVMDE----F-----KVDKFIFSSTAATYGE-V---DVDLITEE  133 (330)
T ss_dssp             EEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHH----T-----TCCEEEEECCGGGGCS-C---SSSSBCTT
T ss_pred             CEEEECCcccCc--cccccCHHHHHHHHhHHHHHHHHHHHH----c-----CCCEEEEeCCceeeCC-C---CCCCCCcC
Confidence            999999996432  124466788999999999998887642    2     2468999999665432 1   12235555


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.++|+.+.+|.
T Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          134 TMTNPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCC
Confidence            566667899999999999999988765   5  888999999998875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.84  E-value=6.8e-20  Score=160.96  Aligned_cols=174  Identities=16%  Similarity=0.139  Sum_probs=132.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|++.|+.|++..|+....+..         ...+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            5899999999999999999999995555544443322111         3468899999999 88877765       68


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+...  ...+.++++..+++|+.++..+++++..    .     +.++||++||...+..    ....++.++
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-----~~~~iv~~SS~~vyg~----~~~~~~~E~  129 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRK----A-----GVSRIVFTSTSTVYGE----AKVIPTPED  129 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHH----H-----TCCEEEEECCGGGGCS----CSSSSBCTT
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHH----c-----CCCeEEEeCchHHhCc----CCCCCCCCC
Confidence            99999999532  3456677889999999999998887543    2     3469999999765432    122335555


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.++|+.+.+|....
T Consensus       130 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~  175 (313)
T 3ehe_A          130 YPTHPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTH  175 (313)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCc
Confidence            677778899999999999999999876   5  888999999999986553

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=7.5e-20  Score=164.71  Aligned_cols=186  Identities=13%  Similarity=0.023  Sum_probs=137.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-----HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+...     ++...+.+... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999998543     11111111000 1236888999999999999998876  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+      +.++||++||.+++...    ...
T Consensus       102 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------~~~~iv~~SS~~~~~~~----~~~  166 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKV----QEI  166 (375)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSC----SSS
T ss_pred             ---CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------ccceEEEecchhhhCCC----CCC
Confidence               68999999996432  2245677889999999999999988665321      13699999997664321    112


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ++.++.+..+...|+.+|++.+.+++.++.++   +  +.+..+.|+.+..|..
T Consensus       167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---N--LFAVNGILFNHESPRR  215 (375)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTS
T ss_pred             CCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEecccccCCCC
Confidence            34555566667899999999999999998876   3  5666688888777654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=1.2e-19  Score=160.91  Aligned_cols=181  Identities=16%  Similarity=0.063  Sum_probs=129.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|+||++++++|++.|++|++++|......+..+.+.+.. +.++.++.+|++|++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            69999999999999999999999999999875332222222332211 346788999999999998888752     699


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||||||....  ....++..+.+++|+.+++.+++++.    +.     +.++||++||.+.+.. ..   ..++.+..
T Consensus        76 ~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-----~~~~iv~~SS~~~~g~-~~---~~~~~e~~  140 (338)
T 1udb_A           76 TVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMR----AA-----NVKNFIFSSSATVYGD-NP---KIPYVESF  140 (338)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHH----HH-----TCCEEEEEEEGGGGCS-CC---SSSBCTTS
T ss_pred             EEEECCccCcc--ccchhcHHHHHHHHHHHHHHHHHHHH----hc-----CCCeEEEEccHHHhCC-CC---CCCcCccc
Confidence            99999996432  11234566789999999999887653    32     3469999999665421 11   11233333


Q ss_pred             CC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          193 GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       193 ~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +. +....|+.+|++.+.+++.++.+.  .+  +++..++|+.+..|
T Consensus       141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~G~  183 (338)
T 1udb_A          141 PTGTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEECC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceecCC
Confidence            43 336789999999999999998874  24  77777888777655

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.83  E-value=1.7e-20  Score=161.33  Aligned_cols=166  Identities=18%  Similarity=0.151  Sum_probs=129.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||+|+||++++++|++.|++|++++|+.....           ..++.++.+|++|++++.++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999865310           1247888999999998888775       58


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+||||||..      ..+++...+++|+.++..+++++.+.         +.++||++||..++.....   ..++.++
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~---~~~~~E~  126 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL---------GKPRIVFASSNHTIGYYPR---TTRIDTE  126 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT---------TCCEEEEEEEGGGSTTSBT---TSCBCTT
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCHHHhCCCCC---CCCCCCC
Confidence            9999999964      23456788999999999999887542         3469999999766532111   1235555


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-cC
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA-TN  238 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~-t~  238 (282)
                      .+..+...|+.+|++.+.+++.++.+   .|  ++++.|+||.+. ++
T Consensus       127 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          127 VPRRPDSLYGLSKCFGEDLASLYYHK---FD--IETLNIRIGSCFPKP  169 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHT---TC--CCEEEEEECBCSSSC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHH---cC--CCEEEEeceeecCCC
Confidence            56666789999999999999887643   46  888999999984 44

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.83  E-value=7.8e-20  Score=165.12  Aligned_cols=185  Identities=16%  Similarity=0.089  Sum_probs=136.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +..+++++|||||+|+||.+++++|++.|++|++++|+.......      .  ..++.++.+|++|.+++.++++    
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~----   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE----   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT----
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC----
Confidence            444678999999999999999999999999999999986542211      0  2357889999999998888774    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc-cc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-RF  185 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~  185 (282)
                         ++|+|||+||.... ...+.+++++.+++|+.++..+++++...         +.++||++||.+.+....... ..
T Consensus        93 ---~~d~Vih~A~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~~V~~SS~~v~~~~~~~~~~~  159 (379)
T 2c5a_A           93 ---GVDHVFNLAADMGG-MGFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETTN  159 (379)
T ss_dssp             ---TCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSSS
T ss_pred             ---CCCEEEECceecCc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeehheeCCCCCCCccC
Confidence               68999999996432 11124567888999999999999887532         245999999966543211100 00


Q ss_pred             cCCCCCC--CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPS--GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~--~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.++.  +..+...|+.+|.+.+.+++.++.++   |  ++++.|+||.+.+|...
T Consensus       160 ~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          160 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             CCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCC
Confidence            1122222  34456789999999999999988765   5  88999999999998754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=9.3e-20  Score=161.73  Aligned_cols=172  Identities=19%  Similarity=0.125  Sum_probs=126.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+....+.    +.    ..++.++.+|++|.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            489999999999999999999999999999998765432    11    1257889999999988887765       58


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||...    .+.+++.+.+++|+.++..+++++.+.         +-++||++||..++......   ....++
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~---~~~~E~  142 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA---------RVPRILYVGSAYAMPRHPQG---LPGHEG  142 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHH---------TCSCEEEECCGGGSCCCTTS---SCBCTT
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHhhCcCCCC---CCCCCC
Confidence            99999999643    234567788999999999999988764         24689999997665421110   011344


Q ss_pred             CCCCC----CccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          192 SGYNG----FRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       192 ~~~~~----~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .+..+    ...|+.+|.+.+.+++.++.   . |  ++++.|+||.+.+|..
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCC
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCC
Confidence            44444    67899999999999988876   2 5  8888999999999876

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.83  E-value=1.3e-19  Score=160.63  Aligned_cols=179  Identities=17%  Similarity=0.129  Sum_probs=135.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHc---C---CEEEEEEcChhhH-HHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALR---G---VHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~---G---~~Vii~~r~~~~~-~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++|||||+|+||.+++++|++.   |   ++|++++|+.... .+..+.+.   ...++.++.+|++|++++.+++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHHHHHHh----
Confidence            6999999999999999999997   8   9999999864210 01111111   1346889999999998887776    


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                         .++|+|||+||....  +.+.+++++.+++|+.++..+++++.+.         +.++||++||.+.+... .   -
T Consensus        75 ---~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~---------~~~~~v~~SS~~vyg~~-~---~  136 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGSI-D---S  136 (337)
T ss_dssp             ---TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCCC-S---S
T ss_pred             ---cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEecchHHhCCC-C---C
Confidence               378999999996432  2244567788999999999999888764         23599999997654321 1   1


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.++.+..+...|+.+|.+.+.+++.++.++   |  ++++.++|+.+.+|...
T Consensus       137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCC
T ss_pred             CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCC
Confidence            234455566677899999999999999998876   4  77888999999998754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.82  E-value=2.5e-19  Score=174.07  Aligned_cols=194  Identities=16%  Similarity=0.099  Sum_probs=137.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+.++++++|||||+|+||++++++|++.|++|++++|+.....+..+++.... ..++.++.+|+++++++.++++.. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-
Confidence            355778999999999999999999999999999999987654333333332211 346888999999999999888753 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+|||+||.....  ...+...+.+++|+.++..+++++..    .     +.++||++||.+.+.........
T Consensus        84 ----~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~----~-----~~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQ----Y-----NVSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             ----CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----H-----TCCEEEEEEEGGGGCCGGGSTTC
T ss_pred             ----CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHH----c-----CCCEEEEECcHHHhCCCcccccc
Confidence                789999999964321  12234466799999998888776543    2     34699999997654211100011


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .++.+..+..+...|+.+|++.+.+++.++.+. ..|  +++..++|+.+..+.
T Consensus       149 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          149 IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGAH  199 (699)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECCC
T ss_pred             CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCCC
Confidence            234444455567789999999999999988775 345  788889998887663

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.82  E-value=2.1e-19  Score=164.75  Aligned_cols=183  Identities=14%  Similarity=0.091  Sum_probs=130.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh---hHHHHHHHHHHhCC-------CCceeEEEccCCCHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA---AGKDVKETIVKEIP-------SAKVDAMELDLSSLASVR   98 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~---~~~~~~~~l~~~~~-------~~~v~~~~~Dvs~~~~i~   98 (282)
                      .+++++|||||+|+||.+++++|++.|++|++++|+..   ......+.+.+.++       ..++.++.+|++|++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45689999999999999999999999999999999977   33333333322211       247999999999988777


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus        99 ~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                              ..+++|+||||||...     ..+++...+++|+.++..+++++.+   .       ..+||++||..+  +
T Consensus       147 --------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~---~-------~~~~v~~SS~~~--G  201 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV--G  201 (427)
T ss_dssp             --------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH---T-------TCEEEEEEEGGG--G
T ss_pred             --------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh---c-------CCcEEEECchHh--C
Confidence                    4568999999999753     2345678899999999999998876   2       358999999776  2


Q ss_pred             ccCC--ccccCCCCCCC---CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          179 YHEG--IRFDKINDPSG---YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       179 ~~~~--~~~~~~~~~~~---~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ....  ....++.++.+   ......|+.+|.+.+.+++.++.    .|  ++++.|+||.+.++....
T Consensus       202 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          202 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             SEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSC
T ss_pred             CCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCC
Confidence            2111  11112333332   44678999999999988887653    56  889999999999887554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=1.1e-19  Score=152.34  Aligned_cols=168  Identities=17%  Similarity=0.068  Sum_probs=125.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+|+||++++++|++.|++|++++|+.......         ..++.++.+|++|.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            7899999999999999999999999999999997653221         2468999999999999888876       58


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||....     .   ...+++|+.++..+++++...         +..++|++||.++........     ..+
T Consensus        69 d~vi~~a~~~~~-----~---~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~-----~~~  126 (227)
T 3dhn_A           69 DAVISAFNPGWN-----N---PDIYDETIKVYLTIIDGVKKA---------GVNRFLMVGGAGSLFIAPGLR-----LMD  126 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT---------TCSEEEEECCSTTSEEETTEE-----GGG
T ss_pred             CEEEEeCcCCCC-----C---hhHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCChhhccCCCCCc-----ccc
Confidence            999999985311     1   125778999977777766432         245999999987655322111     112


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..+...|+.+|.+.+.+++.++.   ..|  ++++.++||.+.+|....
T Consensus       127 ~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~--~~~~ilrp~~v~g~~~~~  172 (227)
T 3dhn_A          127 SGEVPENILPGVKALGEFYLNFLMK---EKE--IDWVFFSPAADMRPGVRT  172 (227)
T ss_dssp             TTCSCGGGHHHHHHHHHHHHHTGGG---CCS--SEEEEEECCSEEESCCCC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhh---ccC--ccEEEEeCCcccCCCccc
Confidence            3344567899999998877776665   345  888999999999886543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.82  E-value=2e-19  Score=161.74  Aligned_cols=178  Identities=10%  Similarity=0.020  Sum_probs=132.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC-CHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~~i~~~~~~i~  105 (282)
                      .|+++++|||||+|+||.+++++|++. |++|++++|+........+       ..++.++.+|++ |.+++.++++   
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc---
Confidence            367799999999999999999999998 9999999998765433211       247899999999 9999888877   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++|+|||+|+....  ....++..+.+++|+.++..+++++...         + .++|++||.+.+.. ...   
T Consensus        91 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~-~~~v~~SS~~vyg~-~~~---  150 (372)
T 3slg_A           91 ----KCDVILPLVAIATP--ATYVKQPLRVFELDFEANLPIVRSAVKY---------G-KHLVFPSTSEVYGM-CAD---  150 (372)
T ss_dssp             ----HCSEEEECBCCCCH--HHHHHCHHHHHHHHTTTTHHHHHHHHHH---------T-CEEEEECCGGGGBS-CCC---
T ss_pred             ----cCCEEEEcCccccH--HHHhhCHHHHHHHHHHHHHHHHHHHHHh---------C-CcEEEeCcHHHhCC-CCC---
Confidence                57999999996532  1234566778999999988887776543         2 59999999654432 111   


Q ss_pred             cCCCCCCCC-------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGY-------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~-------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.+....       .+...|+.+|.+.+.+++.++.+    |  +++..++|+.+.+|...
T Consensus       151 ~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          151 EQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCC
T ss_pred             CCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcc
Confidence            112222211       34558999999998888887765    5  88888999999988754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.81  E-value=3.2e-20  Score=155.02  Aligned_cols=157  Identities=18%  Similarity=0.245  Sum_probs=119.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~~g~i  111 (282)
                      +++||||+|+||++++++|++.|++|++++|+.+.....          .++.++.+|++| ++++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            699999999999999999999999999999997653321          368999999999 888777654       68


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+||||||....          ..+++|+.++..+++++.    +.     +.++||++||..+....    +   ..+ 
T Consensus        65 d~vi~~ag~~~~----------~~~~~n~~~~~~l~~a~~----~~-----~~~~iv~~SS~~~~~~~----~---~~e-  117 (219)
T 3dqp_A           65 DAIINVSGSGGK----------SLLKVDLYGAVKLMQAAE----KA-----EVKRFILLSTIFSLQPE----K---WIG-  117 (219)
T ss_dssp             SEEEECCCCTTS----------SCCCCCCHHHHHHHHHHH----HT-----TCCEEEEECCTTTTCGG----G---CCS-
T ss_pred             CEEEECCcCCCC----------CcEeEeHHHHHHHHHHHH----Hh-----CCCEEEEECcccccCCC----c---ccc-
Confidence            999999997542          156778888888777763    32     34699999997654310    0   000 


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+......|+.+|.+.+.+++      ...|  ++++.|+||.+.++...
T Consensus       118 ~~~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          118 AGFDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCC
T ss_pred             cccccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCC
Confidence            112236789999999887776      3556  89999999999987643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.81  E-value=5.7e-20  Score=163.08  Aligned_cols=185  Identities=17%  Similarity=0.089  Sum_probs=125.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH--HHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~--~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++|||||+|+||++++++|++.|++|+++.|+.+.....  ...+. .  ..++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999989886542211  12221 1  2358889999999988887765      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhh-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                       .+|+|||+|+....    ..++ .++.+++|+.+++.+++++.+..        +-++||++||.++..+........+
T Consensus        80 -~~D~Vih~A~~~~~----~~~~~~~~~~~~nv~gt~~ll~aa~~~~--------~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF----ASEDPENDMIKPAIQGVVNVMKACTRAK--------SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             -TCSEEEEESSCCCC-------------CHHHHHHHHHHHHHHHHCT--------TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             -CCCEEEEeCCccCC----CCCCcHHHHHHHHHHHHHHHHHHHHHcC--------CcCEEEEEecHHHeecCCcCCCCcc
Confidence             57999999985421    2222 24589999999999998886532        1359999999765432110000001


Q ss_pred             CCCCC--------CC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          188 INDPS--------GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       188 ~~~~~--------~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +.+..        +. +....|+.+|.+.+.+++.++.+.   |  +++++|+|+.+.+|....
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~  205 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGSSLTS  205 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSSS
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCC
Confidence            22221        11 112269999999888777766543   5  888999999999997543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.81  E-value=5.5e-20  Score=161.88  Aligned_cols=183  Identities=18%  Similarity=0.121  Sum_probs=121.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc-ChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r-~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ||++|||||+|+||++++++|++.|++|++++| +...... ...+.+ .+  ..++.++.+|++|+++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSFLTN-LPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHHHHT-STTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHHHHh-hhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            589999999999999999999999999999988 5432110 011111 11  1257788999999999888775     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhh-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        .+|+|||+|+..    +.+.++ .++.+++|+.+++.+++++.+..        +.++||++||.++..+....  ..
T Consensus        74 --~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~--------~~~~iV~~SS~~~~~~~~~~--~~  137 (322)
T 2p4h_X           74 --GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK--------TVKRFIYTSSGSAVSFNGKD--KD  137 (322)
T ss_dssp             --TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS--------SCCEEEEEEEGGGTSCSSSC--CS
T ss_pred             --CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccHHHcccCCCC--Ce
Confidence              579999999742    112222 34589999999999999886541        24699999997755431110  01


Q ss_pred             CCCCCCCC---------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGY---------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~---------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.+....         +....|+.+|.+.+.++..++.+   .|  +++++|+||.+.+|...
T Consensus       138 ~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          138 VLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCS
T ss_pred             ecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCC
Confidence            12222111         11126999999866665554432   46  88999999999999754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=1.9e-19  Score=157.70  Aligned_cols=175  Identities=14%  Similarity=0.068  Sum_probs=134.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++|||||+|+||.+++++|++.  |++|++++|+.....     +.+     ++.++.+|++|.+++.++++..    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCHHHHHHHHhhc----
Confidence            378999999999999999999999  899999999865521     111     3678899999999999888764    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+|||+||....   ...+++...+++|+.++..+++++.+.         +.+++|++||...+.....   ..+.
T Consensus        68 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~---~~~~  131 (312)
T 2yy7_A           68 -KITDIYLMAALLSA---TAEKNPAFAWDLNMNSLFHVLNLAKAK---------KIKKIFWPSSIAVFGPTTP---KENT  131 (312)
T ss_dssp             -TCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHTT---------SCSEEECCEEGGGCCTTSC---SSSB
T ss_pred             -CCCEEEECCccCCC---chhhChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHHhCCCCC---CCCc
Confidence             68999999996432   123567788999999998888877542         2459999999765532111   1123


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .++.+..+...|+.+|.+.+.+++.++.++   |  ++++.++|+.+.+|..
T Consensus       132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~  178 (312)
T 2yy7_A          132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWST  178 (312)
T ss_dssp             CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSS
T ss_pred             cccCcCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCC
Confidence            344445567789999999999999888765   5  8889999999998754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=3e-19  Score=158.44  Aligned_cols=176  Identities=15%  Similarity=0.091  Sum_probs=124.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..++++++|||||+|+||.+++++|++.|++|++++|+.....+..+    ..  .++.++.+|++|++++.++++..  
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~----~~--~~~~~~~~Dl~d~~~~~~~~~~~--   88 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK----DH--PNLTFVEGSIADHALVNQLIGDL--   88 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC----CC--TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh----hc--CCceEEEEeCCCHHHHHHHHhcc--
Confidence            44677999999999999999999999999999999997543211110    01  36888999999999999888762  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+||||||.....   +.++++  +++|+.++..+++++.+.         +.++||++||.+.+........ .
T Consensus        89 ---~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~g~~~~~~~-~  150 (333)
T 2q1w_A           89 ---QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN---------NVGRFVYFQTALCYGVKPIQQP-V  150 (333)
T ss_dssp             ---CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGCSCCCSSS-B
T ss_pred             ---CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCcccCC-C
Confidence               789999999975432   344554  999999999999988652         3469999999665420000100 1


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHH-HHHHhccCCCcEEEEEeeCCccccCc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANE-LARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~-la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ++.+.. .+....|+.+|++.+.+++. ++      .  +  ..|+|+.+.+|.
T Consensus       151 ~~~E~~-~p~~~~Y~~sK~~~E~~~~~s~~------~--~--~ilR~~~v~gp~  193 (333)
T 2q1w_A          151 RLDHPR-NPANSSYAISKSANEDYLEYSGL------D--F--VTFRLANVVGPR  193 (333)
T ss_dssp             CTTSCC-CCTTCHHHHHHHHHHHHHHHHTC------C--E--EEEEESEEESTT
T ss_pred             CcCCCC-CCCCCchHHHHHHHHHHHHhhhC------C--e--EEEeeceEECcC
Confidence            233332 22227899999999888877 54      2  3  348888887776

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=3.5e-20  Score=167.24  Aligned_cols=181  Identities=13%  Similarity=0.065  Sum_probs=131.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++++|||||+|+||.+++++|++.| ++|++++|+.....+.   +.   ...++.++.+|++|++++.++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHHhh----
Confidence            4678999999999999999999999999 9999999986542111   10   13468899999999887776554    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+||....  ..+.+++.+.+++|+.++..+++++...        ++-++||++||...+.. ...   .
T Consensus        99 ---~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~V~~SS~~vyg~-~~~---~  161 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKHF--------KRLKKVVYSAAGCSIAE-KTF---D  161 (377)
T ss_dssp             ---CCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTTC--------SSCCEEEEEEEC-------------
T ss_pred             ---CCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCCHHHcCC-CCC---C
Confidence               78999999996432  2234567888999999998888877321        01358999999765431 111   1


Q ss_pred             CCC--CCC---CC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          187 KIN--DPS---GY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       187 ~~~--~~~---~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ++.  ++.   +. .+...|+.+|.+.+.+++.++.++   |  ++++.++||.+.+|..
T Consensus       162 ~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          162 DAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGE  216 (377)
T ss_dssp             -----CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTC
T ss_pred             CcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCC
Confidence            222  333   33 456789999999999999988775   5  7888899999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.81  E-value=1.5e-19  Score=161.65  Aligned_cols=180  Identities=11%  Similarity=0.018  Sum_probs=131.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++++++|||||+|+||.+++++|++.| ++|++++|+.....  .    +...  .+. +.+|+++.+.++.+++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~----~~~~--~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F----VNLV--DLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--G----GGTT--TSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--h----hccc--Cce-EeeecCcHHHHHHHHhh--c
Confidence            3577899999999999999999999999 89999999865421  0    1111  223 67899998888877653  2


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      .++++|+|||+||....    +.++++..+++|+.++..+++++.+.         +. +||++||.+.+.. .   ...
T Consensus       112 ~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~---------~~-r~V~~SS~~v~g~-~---~~~  173 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGG-R---TSD  173 (357)
T ss_dssp             CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGCS-C---SSC
T ss_pred             ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcchHHhCC-C---CCC
Confidence            35689999999996543    34567788999999999999888762         24 8999999765432 1   112


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.++.+..+...|+.+|.+.+.+++.++.++   |  ++++.|+|+.+.+|...
T Consensus       174 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          174 FIESREYEKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             CCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCT
T ss_pred             CcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCC
Confidence            34444445556789999999999988887653   5  78888999999988654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.80  E-value=2.7e-18  Score=141.24  Aligned_cols=156  Identities=16%  Similarity=0.089  Sum_probs=114.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++||||+|+||++++++|++.|++|++++|+.......        ...++.++.+|++|++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            347999999999999999999999999999999987653211        02468899999999998888765       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      .+|+|||+||.... .  ++      .++|+.++..+++++..    .     +.+++|++||...+.. ..        
T Consensus        67 ~~d~vi~~a~~~~~-~--~~------~~~n~~~~~~~~~~~~~----~-----~~~~~v~~Ss~~~~~~-~~--------  119 (206)
T 1hdo_A           67 GQDAVIVLLGTRND-L--SP------TTVMSEGARNIVAAMKA----H-----GVDKVVACTSAFLLWD-PT--------  119 (206)
T ss_dssp             TCSEEEECCCCTTC-C--SC------CCHHHHHHHHHHHHHHH----H-----TCCEEEEECCGGGTSC-TT--------
T ss_pred             CCCEEEECccCCCC-C--Cc------cchHHHHHHHHHHHHHH----h-----CCCeEEEEeeeeeccC-cc--------
Confidence            57999999996533 1  11      13677777777666543    2     3469999999754431 00        


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-ccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAI-ATN  238 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v-~t~  238 (282)
                        ........|+.+|.+++.+++       ..|  ++++.|+||.+ .++
T Consensus       120 --~~~~~~~~y~~~K~~~e~~~~-------~~~--i~~~~lrp~~~~~~~  158 (206)
T 1hdo_A          120 --KVPPRLQAVTDDHIRMHKVLR-------ESG--LKYVAVMPPHIGDQP  158 (206)
T ss_dssp             --CSCGGGHHHHHHHHHHHHHHH-------HTC--SEEEEECCSEEECCC
T ss_pred             --cccccchhHHHHHHHHHHHHH-------hCC--CCEEEEeCCcccCCC
Confidence              001156789999999888763       246  88999999998 444

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.80  E-value=1.3e-18  Score=161.97  Aligned_cols=181  Identities=19%  Similarity=0.170  Sum_probs=130.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHc---CCEEEEEEcChhhHHHHHHHHHHhCC--------------CCceeEEEc
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALR---GVHVVMGVRDIAAGKDVKETIVKEIP--------------SAKVDAMEL   89 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~---G~~Vii~~r~~~~~~~~~~~l~~~~~--------------~~~v~~~~~   89 (282)
                      ...++++||||||+|+||.+++++|++.   |++|++++|+.... ...+++.+...              ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4567899999999999999999999999   99999999987643 22333333222              257999999


Q ss_pred             cCC------CHHHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 023438           90 DLS------SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG  163 (282)
Q Consensus        90 Dvs------~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~  163 (282)
                      |++      +.+++..+++       ++|+||||||....      +.+.+.+++|+.++..+++++...         +
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~---------~  205 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT---------K  205 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS---------S
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC---------C
Confidence            999      5556666655       57999999997542      344567899999998888876431         2


Q ss_pred             CCeEEEEcCCcccccccCCccccCCCCCCCC-----------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 023438          164 EGRIINVSSEGHRLAYHEGIRFDKINDPSGY-----------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHP  232 (282)
Q Consensus       164 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~P  232 (282)
                      ..+||++||.+.+.. ..   ..++.++.+.           .....|+.+|.+.+.+++.++.+.   |  ++++.|+|
T Consensus       206 ~~~~V~iSS~~v~~~-~~---~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ivRp  276 (478)
T 4dqv_A          206 LKPFTYVSTADVGAA-IE---PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVFRC  276 (478)
T ss_dssp             CCCEEEEEEGGGGTT-SC---TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEEEE
T ss_pred             CCeEEEEeehhhcCc-cC---CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEEEC
Confidence            358999999654321 11   1112222211           122459999999999999888765   4  78888999


Q ss_pred             CccccCc
Q 023438          233 GAIATNI  239 (282)
Q Consensus       233 g~v~t~~  239 (282)
                      |.|.++.
T Consensus       277 g~v~G~~  283 (478)
T 4dqv_A          277 GMILADT  283 (478)
T ss_dssp             CEEECCS
T ss_pred             ceeeCCC
Confidence            9998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.79  E-value=5.1e-19  Score=155.42  Aligned_cols=147  Identities=16%  Similarity=0.087  Sum_probs=91.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++++|||||+|+||++++++|++.|++|++++|+...            +  +  ++.+|++|++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999986432            1  1  5778999999999888865     6


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+||||||....  +.+.+++++.+++|+.++..+++++.+.          +.++|++||..++..     ...++.+
T Consensus        61 ~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~-----~~~~~~E  123 (315)
T 2ydy_A           61 PHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDG-----TNPPYRE  123 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS-----SSCSBCT
T ss_pred             CCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCC-----CCCCCCC
Confidence            8999999996532  2356678889999999999999988752          249999999776542     1223455


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHH
Q 023438          191 PSGYNGFRAYSQSKLANILHANELA  215 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la  215 (282)
                      +.+..+...|+.+|.+.+.+++.++
T Consensus       124 ~~~~~~~~~Y~~sK~~~e~~~~~~~  148 (315)
T 2ydy_A          124 EDIPAPLNLYGKTKLDGEKAVLENN  148 (315)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHhC
Confidence            5556667889999999999888764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.79  E-value=3.3e-18  Score=150.14  Aligned_cols=168  Identities=17%  Similarity=0.103  Sum_probs=128.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++|||||+|+||.+++++|++.|++|++++|+.....  .+         ++.++.+|++ .+++.++++       ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN---------DYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC---------ceEEEEcccc-HHHHHHhhc-------CC
Confidence            78999999999999999999999999999999833321  11         5788999999 888877765       78


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+.....      +..+.+++|+.++..+++++...         +-.++|++||...+..    ....++.++
T Consensus        64 d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~---------~~~r~v~~SS~~vyg~----~~~~~~~E~  124 (311)
T 3m2p_A           64 DAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN---------NISNIVYASTISAYSD----ETSLPWNEK  124 (311)
T ss_dssp             SEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCC----GGGCSBCTT
T ss_pred             CEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhCC----CCCCCCCCC
Confidence            9999999975432      44567889999988888777432         2458999999654431    112335555


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..+...|+.+|.+.+.+++.++.+   .|  ++++.++|+.+.+|....
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilRp~~v~G~~~~~  170 (311)
T 3m2p_A          125 ELPLPDLMYGVSKLACEHIGNIYSRK---KG--LCIKNLRFAHLYGFNEKN  170 (311)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHH---SC--CEEEEEEECEEECSCC--
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHH---cC--CCEEEEeeCceeCcCCCC
Confidence            66667789999999999999888775   35  888889999999987654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.79  E-value=1.6e-18  Score=153.75  Aligned_cols=175  Identities=13%  Similarity=0.007  Sum_probs=128.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH-HHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~i~~~~~~i~~~~g  109 (282)
                      +++|||||+|+||.+++++|++. |++|++++|+........       ...++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 899999999876543211       134688999999984 55666665       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+|||+||...+.  ...+++...+++|+.++..+++++..    .     + .+||++||.+.+.. ...   .++.
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~-~~~v~~SS~~v~g~-~~~---~~~~  130 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVK----Y-----R-KRIIFPSTSEVYGM-CSD---KYFD  130 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHH----T-----T-CEEEEECCGGGGBT-CCC---SSBC
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHH----h-----C-CeEEEEecHHHcCC-CCC---CCcC
Confidence            479999999964321  12345677899999999888877643    2     2 69999999665432 111   1122


Q ss_pred             CCCCC-------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPSGY-------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~~~-------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.+.       .+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.+|...
T Consensus       131 e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  184 (345)
T 2bll_A          131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLD  184 (345)
T ss_dssp             TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCC
T ss_pred             CcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcc
Confidence            22211       234489999999999999988775   4  78888999999988754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=1.8e-18  Score=151.91  Aligned_cols=169  Identities=17%  Similarity=0.202  Sum_probs=128.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++|||||+|+||.+++++|++.  |++|++++|+.....             ++.++.+|++|++++.++++..     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999998  899999998754321             3568899999999999888752     7


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+|||+|+....   ...+++...+++|+.++..+++++.+.         +.+++|++||...+....   +..+..+
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~---~~~~~~e  127 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH---------RVEKVVIPSTIGVFGPET---PKNKVPS  127 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCTTS---CSSSBCS
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCC---CCCCccc
Confidence            8999999996432   134567788999999999998877542         246999999976654211   1112334


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +.+..+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+..+.
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~  171 (317)
T 3ajr_A          128 ITITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYK  171 (317)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSS
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccC
Confidence            4455567889999999999999887664   5  888889877776543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.78  E-value=1.5e-19  Score=150.01  Aligned_cols=152  Identities=16%  Similarity=0.085  Sum_probs=119.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++||||+|+||++++++|++.|+  +|++++|+...          .  ..++.++.+|+++++++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            357999999999999999999999998  99999998754          1  236788889998877665543      


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                         +|+||||||....    +.+++++.+++|+.++..+++++.+.         +.+++|++||..+..          
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~----------  119 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADA----------  119 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT----------
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc---------CCCEEEEECCcccCC----------
Confidence               8999999996421    24567788999999998888876432         245899999976542          


Q ss_pred             CCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCCccccCccc
Q 023438          188 INDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDIT-ANSVHPGAIATNIIR  241 (282)
Q Consensus       188 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~-v~~v~Pg~v~t~~~~  241 (282)
                             ++...|+.+|.+.+.+++.       .|  ++ ++.|+||.+.+|...
T Consensus       120 -------~~~~~y~~sK~~~e~~~~~-------~~--~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          120 -------KSSIFYNRVKGELEQALQE-------QG--WPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             -------TCSSHHHHHHHHHHHHHTT-------SC--CSEEEEEECCSEESTTSC
T ss_pred             -------CCccHHHHHHHHHHHHHHH-------cC--CCeEEEEeCceeeCCCCc
Confidence                   2345899999998877764       25  77 899999999988643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.78  E-value=1.5e-18  Score=146.62  Aligned_cols=160  Identities=16%  Similarity=0.137  Sum_probs=106.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..+..|++|||||+|+||++++++|++.| ++|++++|+.+.+...        ...++.++.+|++|+++++++++   
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~---   87 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ---   87 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT---
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc---
Confidence            44556899999999999999999999999 8999999997654321        13468899999999999988876   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          .+|+||||+|...         +           ...++.+++.+++.     +.++||++||..++......  +
T Consensus        88 ----~~D~vv~~a~~~~---------~-----------~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~~~--~  136 (236)
T 3qvo_A           88 ----GQDIVYANLTGED---------L-----------DIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVPGK--F  136 (236)
T ss_dssp             ----TCSEEEEECCSTT---------H-----------HHHHHHHHHHHHHT-----TCCEEEEECCCCC----------
T ss_pred             ----CCCEEEEcCCCCc---------h-----------hHHHHHHHHHHHHc-----CCCEEEEEecceecCCCCcc--c
Confidence                5799999998411         0           12356788888775     45799999997765421100  0


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+............|..++.           .+...|  +++++|+||.+.++...
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~-----------~l~~~g--i~~~~vrPg~i~~~~~~  179 (236)
T 3qvo_A          137 VEWNNAVIGEPLKPFRRAAD-----------AIEASG--LEYTILRPAWLTDEDII  179 (236)
T ss_dssp             --------CGGGHHHHHHHH-----------HHHTSC--SEEEEEEECEEECCSCC
T ss_pred             ccchhhcccchHHHHHHHHH-----------HHHHCC--CCEEEEeCCcccCCCCc
Confidence            00011111112223333322           233567  99999999999988644

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.78  E-value=1.7e-18  Score=153.96  Aligned_cols=179  Identities=13%  Similarity=0.091  Sum_probs=126.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..++++++|||||+|+||.+++++|++.|++|++++|+........+.+   ....++.++.+|+.+..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            3467899999999999999999999999999999998744322111111   11346889999998752           


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                       +.++|+|||+||.....  ...+++...+++|+.++..+++++.+.          +.++|++||...+.. ...   .
T Consensus        89 -~~~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~g~-~~~---~  151 (343)
T 2b69_A           89 -YIEVDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGD-PEV---H  151 (343)
T ss_dssp             -CCCCSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBS-CSS---S
T ss_pred             -hcCCCEEEECccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHHhCC-CCC---C
Confidence             35799999999964321  112345678999999999988877542          248999999655421 111   1


Q ss_pred             CCCCC-----CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDP-----SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~-----~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.+.     .+......|+.+|.+.+.+++.++.+.   |  ++++.++||.+.+|...
T Consensus       152 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  206 (343)
T 2b69_A          152 PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMH  206 (343)
T ss_dssp             SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCC
T ss_pred             CCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCC
Confidence            12222     344556789999999999999988765   4  77888999999998654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.77  E-value=6.7e-18  Score=148.50  Aligned_cols=166  Identities=14%  Similarity=0.120  Sum_probs=126.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++++|||||+|+||.+++++|++.|++|++++|+.                      .+|++|.+++.++++..     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            467999999999999999999999999999888752                      26999999999988865     


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+|||+|+.... .....++....+++|+.++..+++++...         +..++|++||...+... ..   .++.
T Consensus        55 ~~d~vih~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~vyg~~-~~---~~~~  120 (321)
T 1e6u_A           55 RIDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPKL-AK---QPMA  120 (321)
T ss_dssp             CCSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCTT-CC---SSBC
T ss_pred             CCCEEEEcCeecCC-cchhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEccHHHcCCC-CC---CCcC
Confidence            78999999996432 11234566788999999988888877542         23599999997654321 11   1122


Q ss_pred             CCC-----CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPS-----GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~-----~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.     ..+....|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.+|...
T Consensus       121 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          121 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCC
T ss_pred             ccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCC
Confidence            221     22224589999999999999988765   4  88899999999998654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.77  E-value=4.7e-18  Score=141.88  Aligned_cols=164  Identities=12%  Similarity=0.029  Sum_probs=112.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||++++++|++.|++|++++|+.+......        ..++.++.+|++|+++     +.    +.++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-----~~----~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-----AD----LDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-----HH----HTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-----hh----cccCC
Confidence            5999999999999999999999999999999976644321        3468999999999887     22    24789


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||||||.....     +    ...+|+.++    +.+++.+++.     + +++|++||.++........ .....+..
T Consensus        65 ~vi~~ag~~~~~-----~----~~~~n~~~~----~~l~~a~~~~-----~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~  124 (224)
T 3h2s_A           65 AVVDALSVPWGS-----G----RGYLHLDFA----THLVSLLRNS-----D-TLAVFILGSASLAMPGADH-PMILDFPE  124 (224)
T ss_dssp             EEEECCCCCTTS-----S----CTHHHHHHH----HHHHHTCTTC-----C-CEEEEECCGGGSBCTTCSS-CGGGGCCG
T ss_pred             EEEECCccCCCc-----c----hhhHHHHHH----HHHHHHHHHc-----C-CcEEEEecceeeccCCCCc-cccccCCC
Confidence            999999975111     1    134566664    4455555553     3 7999999976655322110 01111111


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .......|+.+|.+.+.+    .......|  ++++.|+||.+.++.
T Consensus       125 ~~~~~~~y~~sK~~~e~~----~~~~~~~~--i~~~ivrp~~v~g~~  165 (224)
T 3h2s_A          125 SAASQPWYDGALYQYYEY----QFLQMNAN--VNWIGISPSEAFPSG  165 (224)
T ss_dssp             GGGGSTTHHHHHHHHHHH----HHHTTCTT--SCEEEEEECSBCCCC
T ss_pred             CCccchhhHHHHHHHHHH----HHHHhcCC--CcEEEEcCccccCCC
Confidence            222256799999987743    22223556  888889999999883

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.76  E-value=4.6e-18  Score=147.69  Aligned_cols=155  Identities=21%  Similarity=0.265  Sum_probs=121.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+++|||||+|+||++++++|++.|++|++++|+                       .+|++|.+++.++++.+     +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----K   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----C
Confidence            4799999999999999999999999999999986                       26999999999988865     7


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+|||+||....  +.+.+++.+.+++|+.++..+++++.+.         +. +||++||.+.+...    ...++.+
T Consensus        64 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~---------~~-~iv~~SS~~v~~~~----~~~~~~E  127 (292)
T 1vl0_A           64 PNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV---------GA-EIVQISTDYVFDGE----AKEPITE  127 (292)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH---------TC-EEEEEEEGGGSCSC----CSSCBCT
T ss_pred             CCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEechHHeECCC----CCCCCCC
Confidence            8999999996432  2345678889999999999999988652         23 99999997654321    1123445


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +.+..+...|+.+|.+.+.+++.++.         .+..|+|+.+.+|
T Consensus       128 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          128 FDEVNPQSAYGKTKLEGENFVKALNP---------KYYIVRTAWLYGD  166 (292)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEESS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHhhCC---------CeEEEeeeeeeCC
Confidence            55555677899999998888877642         1345888888877

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.76  E-value=3.3e-18  Score=149.61  Aligned_cols=175  Identities=12%  Similarity=0.034  Sum_probs=128.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++|||||+|+||.+++++|++.| ++|++++|+.....  .+.+.    +  +. +.+|+++.+.++.+++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999998865421  11111    1  22 668999888877766521  12369


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||....    +.+++...+++|+.++..+++++.+.         +. ++|++||.+.+.. ..   ..++.++
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~-~~v~~SS~~v~g~-~~---~~~~~E~  131 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGG-RT---SDFIESR  131 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGTT-CC---SCBCSSG
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeeHHHhCC-CC---CCCCCCC
Confidence            999999996543    34567788999999999988887543         24 8999999765432 11   1123444


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+..+...|+.+|.+.+.+++.++.+   .|  ++++.++||.+.+|...
T Consensus       132 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g--~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          132 EYEKPLNVYGYSKFLFDEYVRQILPE---AN--SQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGG---CS--SCEEEEEECEEESSSCG
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cC--CCEEEEeCCcEECcCCC
Confidence            44555678999999999998887765   35  78888999999998754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.75  E-value=6.7e-18  Score=147.58  Aligned_cols=172  Identities=16%  Similarity=0.094  Sum_probs=124.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.++++++|||||+|+||.+++++|++.|+      +...             ....+..+.+|++|.+++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhhc--
Confidence            457789999999999999999999999998      1100             0113444578999999999988863  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+|+.... ...+.++....+++|+.++..+++++...         +-.++|++||...+.. ...   .
T Consensus        61 ---~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------~~~~~v~~SS~~vyg~-~~~---~  123 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFEV---------GARKVVSCLSTCIFPD-KTT---Y  123 (319)
T ss_dssp             ---CCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSCS-SCC---S
T ss_pred             ---CCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEEcchhhcCC-CCC---C
Confidence               68999999997432 12244556778999999988888776432         2358999999755421 111   1


Q ss_pred             CCCCC-----CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDP-----SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~-----~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.++     .+.+....|+.+|.+.+.+++.++.+.   |  +++..++|+.+.+|...
T Consensus       124 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          124 PIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             SBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCC
T ss_pred             CccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCC
Confidence            22222     222333469999999999999888775   4  78888999999988754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.75  E-value=1.3e-17  Score=161.03  Aligned_cols=178  Identities=12%  Similarity=0.012  Sum_probs=131.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~  106 (282)
                      ++++++|||||+|+||.+++++|++. |++|++++|+.......    .   ...++.++.+|++|.++ ++.+++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L---NHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T---TCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c---cCCceEEEECCCCCcHHHHHHhhc----
Confidence            46789999999999999999999998 89999999987653221    1   13468899999999765 555554    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+||.....  ...+++.+.+++|+.++..+++++...         + .++|++||...+... ..   .
T Consensus       382 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~---------~-~r~V~~SS~~vyg~~-~~---~  442 (660)
T 1z7e_A          382 ---KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY---------R-KRIIFPSTSEVYGMC-SD---K  442 (660)
T ss_dssp             ---HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT---------T-CEEEEECCGGGGBTC-CS---S
T ss_pred             ---CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh---------C-CEEEEEecHHHcCCC-CC---c
Confidence               579999999965431  123556788999999998888777542         2 699999997654321 11   1


Q ss_pred             CCCCCCCC-------CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGY-------NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~-------~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.++.+.       .....|+.+|.+.+.+++.++.+.   |  ++++.++||.+.+|...
T Consensus       443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSS
T ss_pred             ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCcc
Confidence            12222211       234579999999999999988775   5  78888999999998753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.75  E-value=8e-18  Score=145.82  Aligned_cols=155  Identities=16%  Similarity=0.155  Sum_probs=122.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|+||.+++++|+++|++|++++|.                       .+|++|.+++.++++.+     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999982                       27999999999998876     789


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+||....  +...+++...+++|+.++..+++++.+.          +.++|++||...+..    ....++.++.
T Consensus        59 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~----~~~~~~~E~~  122 (287)
T 3sc6_A           59 IIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQG----DRPEGYDEFH  122 (287)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCC----CCSSCBCTTS
T ss_pred             EEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCC----CCCCCCCCCC
Confidence            99999997532  2234667889999999999988887543          248999999765432    1123455666


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      +..+...|+.+|.+.+.+++.++.     .  +  ..++|+.+.+|..
T Consensus       123 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~--~--~ilR~~~v~G~~~  161 (287)
T 3sc6_A          123 NPAPINIYGASKYAGEQFVKELHN-----K--Y--FIVRTSWLYGKYG  161 (287)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS-----S--E--EEEEECSEECSSS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCC-----C--c--EEEeeeeecCCCC
Confidence            667778999999998888776543     1  3  5699999988753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.74  E-value=2.2e-17  Score=137.36  Aligned_cols=160  Identities=16%  Similarity=0.203  Sum_probs=105.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||++++++|++.|++|++++|+.+......         .++.++.+|++|+++     +.    +.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~-----~~----~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL-----SD----LSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH-----HH----HTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh-----hh----hcCCC
Confidence            6999999999999999999999999999999976644321         368899999999887     22    24789


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||||||.....           ..+|+.+    ++.+++.+++.     +.+++|++||..+..+.....   ...++.
T Consensus        64 ~vi~~ag~~~~~-----------~~~~~~~----~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~---~~~~~~  120 (221)
T 3ew7_A           64 VVVDAYGISPDE-----------AEKHVTS----LDHLISVLNGT-----VSPRLLVVGGAASLQIDEDGN---TLLESK  120 (221)
T ss_dssp             EEEECCCSSTTT-----------TTSHHHH----HHHHHHHHCSC-----CSSEEEEECCCC------------------
T ss_pred             EEEECCcCCccc-----------cchHHHH----HHHHHHHHHhc-----CCceEEEEecceEEEcCCCCc---cccccC
Confidence            999999973211           2234444    55556666553     357999999987765422110   111222


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      +......|+.+|.+.+.+. .+..  ...|  ++++.|+||.+.+|
T Consensus       121 ~~~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~  161 (221)
T 3ew7_A          121 GLREAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEP  161 (221)
T ss_dssp             ----CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecC
Confidence            3334566999999977652 1211  1456  88888999999987

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.74  E-value=1.4e-17  Score=143.00  Aligned_cols=142  Identities=18%  Similarity=0.184  Sum_probs=111.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||++++++|++ |++|++++|+... .          ++     +.+|++|++++.++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q----------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T----------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C----------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            699999999999999999994 8999999998642 0          12     789999999999998875     689


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +||||||....  +.+.+++++.+++|+.++..+++++.+    .      ++++|++||..++.+..     .++.++.
T Consensus        60 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~------~~~iv~~SS~~~~~~~~-----~~~~e~~  122 (273)
T 2ggs_A           60 VIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I------DSYIVHISTDYVFDGEK-----GNYKEED  122 (273)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T------TCEEEEEEEGGGSCSSS-----CSBCTTS
T ss_pred             EEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h------CCeEEEEecceeEcCCC-----CCcCCCC
Confidence            99999996432  234567888999999999999988853    1      35999999977654211     1344444


Q ss_pred             CCCCCccchHhHHHHHHHHHH
Q 023438          193 GYNGFRAYSQSKLANILHANE  213 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~  213 (282)
                      +..+...|+.+|++.+.+++.
T Consensus       123 ~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          123 IPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             CCCCSSHHHHHHHHHHHHHCC
T ss_pred             CCCCCCHHHHHHHHHHHHHhC
Confidence            555567899999999888876

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.73  E-value=1.9e-18  Score=151.71  Aligned_cols=176  Identities=17%  Similarity=-0.007  Sum_probs=120.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++++|||||+|+||.+++++|++.|++|++++|+........+.+.......++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999986521000000100001123445555554                


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       ++|+|||+|+....  ....++....++ |+.++..+++++...         +-.+||++||...+..    ....++
T Consensus        69 -~~d~vi~~a~~~~~--~~~~~~~~~~~~-n~~~~~~ll~a~~~~---------~v~~~v~~SS~~v~~~----~~~~~~  131 (321)
T 3vps_A           69 -DVRLVYHLASHKSV--PRSFKQPLDYLD-NVDSGRHLLALCTSV---------GVPKVVVGSTCEVYGQ----ADTLPT  131 (321)
T ss_dssp             -TEEEEEECCCCCCH--HHHTTSTTTTHH-HHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCS----CSSSSB
T ss_pred             -cCCEEEECCccCCh--HHHHhCHHHHHH-HHHHHHHHHHHHHHc---------CCCeEEEecCHHHhCC----CCCCCC
Confidence             78999999996542  111222334566 999988888777543         2359999999765432    122245


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCccccCcccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDI-TANSVHPGAIATNIIRH  242 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i-~v~~v~Pg~v~t~~~~~  242 (282)
                      .++.+..+...|+.+|.+.+.+++.++.+.   |  + +++.++|+.+.+|....
T Consensus       132 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~  181 (321)
T 3vps_A          132 PEDSPLSPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERP  181 (321)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCT
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCC
Confidence            556666677899999999999888888764   4  6 88889999999987654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.72  E-value=1.9e-17  Score=144.16  Aligned_cols=159  Identities=13%  Similarity=0.053  Sum_probs=121.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++||||+|+||.+++++|+ .|++|++++|+..                   .+.+|++|.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999998751                   2468999999999888765     689


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+||....  ..+.+++++.+++|+.++..+++++..    .      +.++|++||...+...    ...++.++.
T Consensus        57 ~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~------~~~~v~~SS~~vy~~~----~~~~~~E~~  120 (299)
T 1n2s_A           57 VIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANE----T------GAWVVHYSTDYVFPGT----GDIPWQETD  120 (299)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTT----T------TCEEEEEEEGGGSCCC----TTCCBCTTS
T ss_pred             EEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEEecccEEeCC----CCCCCCCCC
Confidence            99999996432  123456778899999999888887732    1      2489999997654321    112344555


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +..+...|+.+|.+.+.+++.++.         +++.++|+.+.+|...
T Consensus       121 ~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          121 ATSPLNVYGKTKLAGEKALQDNCP---------KHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSC
T ss_pred             CCCCccHHHHHHHHHHHHHHHhCC---------CeEEEeeeeecCCCcC
Confidence            555677899999998888776532         3466999999988643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.69  E-value=2.5e-16  Score=147.49  Aligned_cols=181  Identities=14%  Similarity=0.086  Sum_probs=127.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh---HHHHHHHHHHh-------CCCCceeEEEccCCCHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA---GKDVKETIVKE-------IPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~---~~~~~~~l~~~-------~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      .++||||||+|+||.+++++|.+.|++|++++|+...   .....+.+...       ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999998773   22222222211       01357999999999987776  


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc
Q 023438          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~  180 (282)
                            ...++|+|||||+....     ..++...+++|+.++..+++++.+   .       ..++|++||.++  +.+
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~---~-------~~~~v~iSS~~v--G~~  284 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV--GTY  284 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT---T-------TCEEEEEEESCT--TSE
T ss_pred             ------CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh---C-------CCcEEEeCChhh--ccC
Confidence                  34589999999996532     234566789999999998887755   1       358999999776  221


Q ss_pred             CC--ccccCCCCCCC---CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          181 EG--IRFDKINDPSG---YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       181 ~~--~~~~~~~~~~~---~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..  ....++.+..+   ......|+.+|.+.+.+++.++.    .|  ++++.++||.+.++....
T Consensus       285 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          285 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             ECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSC
T ss_pred             CccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCC
Confidence            11  11112333322   33567899999998888877643    46  888999999999886543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.68  E-value=1.8e-17  Score=143.73  Aligned_cols=163  Identities=15%  Similarity=0.005  Sum_probs=118.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |+++++|||| +|+||.+++++|++.|++|++++|+....            ..++.++.+|++|.+++.++++      
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------
Confidence            3567899999 59999999999999999999999986541            2468899999999998877665      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +++|+|||+||..       ..+....+++|+.++..+++++.    +.     +.+++|++||.+.+.. .   ...++
T Consensus        62 ~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~----~~-----~~~~~v~~SS~~vyg~-~---~~~~~  121 (286)
T 3gpi_A           62 LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALE----GA-----PLQHVFFVSSTGVYGQ-E---VEEWL  121 (286)
T ss_dssp             GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTT----TS-----CCCEEEEEEEGGGCCC-C---CSSEE
T ss_pred             CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHh----hC-----CCCEEEEEcccEEEcC-C---CCCCC
Confidence            2699999999852       24456678889999888777764    22     3469999999765432 1   11234


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .++.+..+...|+.+|.+.+.+ +..          ++++.++|+.+.+|...
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          122 DEDTPPIAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBC
T ss_pred             CCCCCCCCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCch
Confidence            5556666778999999997766 432          34566999999988644

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.65  E-value=8.2e-16  Score=133.01  Aligned_cols=145  Identities=14%  Similarity=0.112  Sum_probs=110.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      |+++||||+|+||.+++++|++.  |++|++++|+........    .    .++.++.+|++|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  999999999876654322    1    257889999999988887765       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|+|||+|+..  .   .  +     ++|+.++..+++++.    +.     +-++||++||..+..            
T Consensus        66 ~~d~vi~~a~~~--~---~--~-----~~n~~~~~~l~~a~~----~~-----~~~~~v~~Ss~~~~~------------  112 (287)
T 2jl1_A           66 GVSKLLFISGPH--Y---D--N-----TLLIVQHANVVKAAR----DA-----GVKHIAYTGYAFAEE------------  112 (287)
T ss_dssp             TCSEEEECCCCC--S---C--H-----HHHHHHHHHHHHHHH----HT-----TCSEEEEEEETTGGG------------
T ss_pred             cCCEEEEcCCCC--c---C--c-----hHHHHHHHHHHHHHH----Hc-----CCCEEEEECCCCCCC------------
Confidence            579999999852  1   1  1     568888777776663    32     245999999975431            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                            ....|+.+|.+.+.+++.       .|  ++++.++||.+.++.
T Consensus       113 ------~~~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          113 ------SIIPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFF  147 (287)
T ss_dssp             ------CCSTHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHH
T ss_pred             ------CCCchHHHHHHHHHHHHH-------cC--CCeEEEECCEecccc
Confidence                  123799999998887752       46  778889999988765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.64  E-value=4.6e-15  Score=129.25  Aligned_cols=157  Identities=14%  Similarity=0.039  Sum_probs=110.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .++++||||+|+||.+++++|++.| ++|++++|+......  +.+..    ..+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            4799999999999999999999999 999999998765421  22222    257889999999998888775       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      .+|+|||+++.....          ..+.|+.+    ++.+++.+++.     +-++||++|+...... .         
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~~----~~~~~~aa~~~-----gv~~iv~~S~~~~~~~-~---------  122 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVKQ----GKLLADLARRL-----GLHYVVYSGLENIKKL-T---------  122 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHHH----HHHHHHHHHHH-----TCSEEEECCCCCHHHH-T---------
T ss_pred             cCCEEEEeCCCCccc----------cchHHHHH----HHHHHHHHHHc-----CCCEEEEEcCcccccc-C---------
Confidence            579999999842110          12334444    45555555554     3468999666432210 0         


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                         +......|+.+|.+++.+++.       .|  ++++.|+||.+.+++..
T Consensus       123 ---~~~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          123 ---AGRLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             ---TTSCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGT
T ss_pred             ---CCcccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchh
Confidence               011245799999998877654       25  78888999999887643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.63  E-value=7.3e-15  Score=131.38  Aligned_cols=152  Identities=21%  Similarity=0.176  Sum_probs=108.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEcc-CCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-LSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~D-vs~~~~i~~~~~~i~~~  107 (282)
                      +++++++||||+|+||.+++++|++.|++|++++|+.....  .+.+.+   ...+.++.+| ++|++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-----
Confidence            34688999999999999999999999999999999876542  122322   1258889999 999998888765     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcc-cccccCCccc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGH-RLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~-~~~~~~~~~~  185 (282)
                        .+|+||||++....             +.|..+     +.+++.+++.     + -++||++||... ..        
T Consensus        73 --~~d~Vi~~a~~~~~-------------~~~~~~-----~~l~~aa~~~-----g~v~~~V~~SS~~~~~~--------  119 (352)
T 1xgk_A           73 --GAHLAFINTTSQAG-------------DEIAIG-----KDLADAAKRA-----GTIQHYIYSSMPDHSLY--------  119 (352)
T ss_dssp             --TCSEEEECCCSTTS-------------CHHHHH-----HHHHHHHHHH-----SCCSEEEEEECCCGGGT--------
T ss_pred             --cCCEEEEcCCCCCc-------------HHHHHH-----HHHHHHHHHc-----CCccEEEEeCCcccccc--------
Confidence              57999999974310             123332     4445555553     3 369999999752 21        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                             +......|+.+|.+.+.+++.+       |  ++++.|+||.+-++.
T Consensus       120 -------~~~~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          120 -------GPWPAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNF  157 (352)
T ss_dssp             -------SSCCCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGC
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCc
Confidence                   1233467999999988877652       5  777889999765443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.63  E-value=6.3e-15  Score=131.12  Aligned_cols=156  Identities=14%  Similarity=0.058  Sum_probs=109.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH---HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD---VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~---~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |+.++++||||+|+||.+++++|++.|++|++++|+......   ..+++.    ..++.++.+|++|.+++.+++++. 
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~-   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE----DKGAIIVYGLINEQEAMEKILKEH-   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHHHT-
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH----hCCcEEEEeecCCHHHHHHHHhhC-
Confidence            456799999999999999999999999999999998622222   222332    236899999999999999988863 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCcc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  184 (282)
                          ++|+|||++|..                 |+.++..+++++...         + -.++|+ |+ .+..       
T Consensus        83 ----~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~---------g~v~~~v~-S~-~g~~-------  123 (346)
T 3i6i_A           83 ----EIDIVVSTVGGE-----------------SILDQIALVKAMKAV---------GTIKRFLP-SE-FGHD-------  123 (346)
T ss_dssp             ----TCCEEEECCCGG-----------------GGGGHHHHHHHHHHH---------CCCSEEEC-SC-CSSC-------
T ss_pred             ----CCCEEEECCchh-----------------hHHHHHHHHHHHHHc---------CCceEEee-cc-cCCC-------
Confidence                789999999962                 566666666555432         2 346664 43 2211       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                         ..+..+.++...|+.+|.+++.+.+.       .|  +.+..|+||.+.+...
T Consensus       124 ---~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          124 ---VNRADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWPY  167 (346)
T ss_dssp             ---TTTCCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCCC
T ss_pred             ---CCccCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEecccccccC
Confidence               22333455667899999997766654       45  6677799998877553

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.61  E-value=9.9e-15  Score=126.17  Aligned_cols=154  Identities=10%  Similarity=0.008  Sum_probs=110.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++|||| |+||.+++++|++.|++|++++|+........    .    .++.++.+|++|.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A----SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H----TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h----CCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999999999999987654432    1    25889999999833            4578


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+.....     +.              .++.++..+.+..   .+-.++|++||.+.+.. .   ...++.++
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~---~~~~~~v~~Ss~~vyg~-~---~~~~~~E~  118 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARA---AQFRWVGYLSTTAVYGD-H---DGAWVDET  118 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTG---GGCSEEEEEEEGGGGCC-C---TTCEECTT
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhc---CCceEEEEeecceecCC-C---CCCCcCCC
Confidence            9999999964321     11              1234444444410   02469999999654431 1   11234555


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      .+..+...|+.+|.+.+.+++.+      .|  ++++.++|+.+.+|..
T Consensus       119 ~~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A          119 TPLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTB
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCc
Confidence            56666778999999988777766      45  7788899999988753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=4.9e-15  Score=127.95  Aligned_cols=142  Identities=16%  Similarity=0.114  Sum_probs=102.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++||||+|+||.+++++|++.  |++|++++|+........    .    ..+.++.+|++|++++.++++       .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHHh-------C
Confidence            4899999999999999999998  999999999876654322    1    247889999999988887765       5


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+|||+||...              ..|+.++..+++    .+.+.     +-++||++||..+..             
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~----a~~~~-----~~~~~v~~Ss~~~~~-------------  109 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVIN----AAKAA-----GVKFIAYTSLLHADT-------------  109 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHH----HHHHH-----TCCEEEEEEETTTTT-------------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHH----HHHHc-----CCCEEEEECCCCCCC-------------
Confidence            799999998520              125555544444    44443     346999999965431             


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                           ....|+.+|.+.+.+++.       .|  ++++.++||.+.+++
T Consensus       110 -----~~~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          110 -----SPLGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENY  144 (286)
T ss_dssp             -----CCSTTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHH
T ss_pred             -----CcchhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhh
Confidence                 124799999998887753       35  888899999887764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.58  E-value=7.3e-15  Score=131.16  Aligned_cols=174  Identities=13%  Similarity=0.013  Sum_probs=116.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcC-----CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRG-----VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G-----~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++++|||||+|+||.+++++|++.|     ++|++++|+.....         ....++.++.+|++|.+++.++++.+ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            4789999999999999999999999     99999999865432         11346889999999999888776542 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEE-------EEcCCccccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII-------NVSSEGHRLA  178 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv-------~vsS~~~~~~  178 (282)
                         +++|+|||+||...       ++....+++|+.++..+++++.+...       +-.++|       ++||.+.+..
T Consensus        71 ---~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~-------~~~~~v~~~g~~i~~Ss~~vyg~  133 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP-------NLKHISLQTGRKHYMGPFESYGK  133 (364)
T ss_dssp             ---TTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT-------TCCEEEEECCTHHHHCCGGGTTT
T ss_pred             ---CCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc-------ccceEEeccCceEEEechhhccc
Confidence               24899999999642       34667899999999999888765411       123666       5777543321


Q ss_pred             ccCCccccCCCCCCCC-CCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          179 YHEGIRFDKINDPSGY-NGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~-~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                       .. ....++.++.+. +....|.    +.+.+++.++.+.  .+  +++..++|+.+.+|...
T Consensus       134 -~~-~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~~~--~~--~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          134 -IE-SHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVEKK--EG--LTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             -SC-CCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHTTS--TT--CEEEEEEESSEECCCTT
T ss_pred             -cc-cCCCCCCccccCCccchhhH----HHHHHHHHHhhcC--CC--ceEEEECCCceeCCCCC
Confidence             10 001123333332 2234562    2333333333221  13  77788999999988654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.57  E-value=9.3e-14  Score=121.17  Aligned_cols=150  Identities=15%  Similarity=0.119  Sum_probs=101.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-------hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +++++||||+|+||.+++++|++.|++|++++|+.       ++.+. .+++..    ..+.++.+|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            47899999999999999999999999999999986       33322 223322    257889999999998888776 


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCC
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  182 (282)
                            .+|+|||++|...                 +.+..    .+++.+++.     + -.++|  .|..+..     
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~----~l~~aa~~~-----g~v~~~v--~S~~g~~-----  116 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQV----KIIKAIKEA-----GNVKKFF--PSEFGLD-----  116 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHH----HHHHHHHHH-----CCCSEEE--CSCCSSC-----
T ss_pred             ------CCCEEEECCcccc-----------------cccHH----HHHHHHHhc-----CCceEEe--ecccccC-----
Confidence                  5899999999632                 12222    333444443     2 35776  2332211     


Q ss_pred             ccccCCCC-CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          183 IRFDKIND-PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       183 ~~~~~~~~-~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                           ..+ ..+.+....| .+|.+++.+.+.       .|  ++++.|+||++.+++.
T Consensus       117 -----~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A          117 -----VDRHDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             -----TTSCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTG
T ss_pred             -----cccccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeecccc
Confidence                 001 1122335678 999998776642       25  6777799999887653

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.56  E-value=3.5e-14  Score=133.17  Aligned_cols=165  Identities=16%  Similarity=0.074  Sum_probs=115.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++||||||+|+||.+++++|++.|++|++++|+....                ..+.+|+.+..         ...+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCC
Confidence            67999999999999999999999999999999986541                12567876421         223357


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +|+|||+||..... ..+.+.....+++|+.++..+++++.   ...     +..+||++||.+.+.....   ..++.+
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~-----~~~r~V~~SS~~vyg~~~~---~~~~~E  269 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVA---EST-----QCTTMISASAVGFYGHDRG---DEILTE  269 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHH---HCS-----SCCEEEEEEEGGGGCSEEE---EEEECT
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHH---hcC-----CCCEEEEeCcceEecCCCC---CCccCC
Confidence            99999999964322 44667778899999999998888643   221     3468999999665431111   112333


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ..+. +...|+.+|...+.+.    .+....|  ++++.++||.+.+|.
T Consensus       270 ~~~~-~~~~y~~~~~~~E~~~----~~~~~~g--i~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          270 ESES-GDDFLAEVCRDWEHAT----APASDAG--KRVAFIRTGVALSGR  311 (516)
T ss_dssp             TSCC-CSSHHHHHHHHHHHTT----HHHHHTT--CEEEEEEECEEEBTT
T ss_pred             CCCC-CcChHHHHHHHHHHHH----HHHHhCC--CCEEEEEeeEEECCC
Confidence            3333 4567888888765543    3344567  888999999999986

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.55  E-value=6.1e-14  Score=121.46  Aligned_cols=146  Identities=19%  Similarity=0.179  Sum_probs=100.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++|||||+|+||++++++|++. |++|++++|+.+.....    .    ..++.++.+|++|++++.++++       .+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5999999999999999999998 99999999997764322    1    2468999999999998887765       67


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||....            ...|+.+    ++.+++.+++.     +-++||++||.+...              
T Consensus        67 d~vi~~a~~~~~------------~~~~~~~----~~~l~~aa~~~-----gv~~iv~~Ss~~~~~--------------  111 (289)
T 3e48_A           67 DTVVFIPSIIHP------------SFKRIPE----VENLVYAAKQS-----GVAHIIFIGYYADQH--------------  111 (289)
T ss_dssp             SEEEECCCCCCS------------HHHHHHH----HHHHHHHHHHT-----TCCEEEEEEESCCST--------------
T ss_pred             CEEEEeCCCCcc------------chhhHHH----HHHHHHHHHHc-----CCCEEEEEcccCCCC--------------
Confidence            999999986432            1124444    34555555553     346999999953211              


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                           ...|..++...     .+...+...|  ++++.++||.+.+++.
T Consensus       112 -----~~~~~~~~~~~-----~~e~~~~~~g--~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A          112 -----NNPFHMSPYFG-----YASRLLSTSG--IDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             -----TCCSTTHHHHH-----HHHHHHHHHC--CEEEEEEECEESTTHH
T ss_pred             -----CCCCccchhHH-----HHHHHHHHcC--CCEEEEeccccccccH
Confidence                 11222222211     2223334456  8889999999988753

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.50  E-value=3.2e-14  Score=127.67  Aligned_cols=138  Identities=16%  Similarity=0.087  Sum_probs=106.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++|||||+|+||++++++|++.|+ +|+.++|+                           +|++++.++++       ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 77776553                           67788888776       47


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+||....      ++....+++|+.++..+++++.    +.    +.+.++|++||..+.               
T Consensus        48 d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~----~~----~~~~~~v~~Ss~~~~---------------   98 (369)
T 3st7_A           48 DFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILT----RN----TKKPAILLSSSIQAT---------------   98 (369)
T ss_dssp             SEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHT----TC----SSCCEEEEEEEGGGG---------------
T ss_pred             CEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHH----Hh----CCCCeEEEeCchhhc---------------
Confidence            999999996542      2334457778888777776653    22    122489999996543               


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                          +...|+.+|.+.+.+++.++.+.   |  +++..++|+.+.++....
T Consensus        99 ----~~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~i~R~~~v~G~~~~~  140 (369)
T 3st7_A           99 ----QDNPYGESKLQGEQLLREYAEEY---G--NTVYIYRWPNLFGKWCKP  140 (369)
T ss_dssp             ----SCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCT
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHh---C--CCEEEEECCceeCCCCCC
Confidence                15689999999999999988875   3  667779999999886543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.49  E-value=1.3e-13  Score=120.22  Aligned_cols=153  Identities=15%  Similarity=0.165  Sum_probs=99.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH--HHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~--~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++++||||+|+||.+++++|++.|++|++++|+....  .+..+.+... ....+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc------
Confidence            46899999999999999999999999999999985322  1111111111 12368889999999999888876      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCccccC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                       .+|+|||+++...                 +.+    .+.+++.+++.     + -.+||+ |+ .+..          
T Consensus        77 -~~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v~-S~-~g~~----------  117 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ-----------------IES----QVNIIKAIKEV-----GTVKRFFP-SE-FGND----------  117 (308)
T ss_dssp             -TCSEEEECCCGGG-----------------SGG----GHHHHHHHHHH-----CCCSEEEC-SC-CSSC----------
T ss_pred             -CCCEEEECCcchh-----------------hhh----HHHHHHHHHhc-----CCCceEee-cc-cccC----------
Confidence             5799999998532                 122    23344444543     2 357763 43 2211          


Q ss_pred             CCCCCC-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          188 INDPSG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       188 ~~~~~~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      ..+..+ .+....| .+|.+++.+.+.       .|  +++..++||.+.+++
T Consensus       118 ~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          118 VDNVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGYF  160 (308)
T ss_dssp             TTSCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHH
T ss_pred             ccccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceecccc
Confidence            011111 2234568 999998776653       24  566668999876543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.48  E-value=2.6e-13  Score=119.22  Aligned_cols=149  Identities=13%  Similarity=0.063  Sum_probs=98.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-h----hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-A----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++||||+|+||.+++++|++.|++|++++|+. .    ...+..+++..    ..+.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCHHHHHHHHc---
Confidence            36799999999999999999999999999999986 2    12222222322    358899999999998888776   


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCcc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  184 (282)
                          .+|+|||+++...                 +.+    .+.+++.+.+.     + -.+||  .|..+...      
T Consensus        77 ----~~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v--~S~~g~~~------  118 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-----------------ISS----QIHIINAIKAA-----GNIKRFL--PSDFGCEE------  118 (321)
T ss_dssp             ----TCSEEEECCCGGG-----------------SGG----GHHHHHHHHHH-----CCCCEEE--CSCCSSCG------
T ss_pred             ----CCCEEEECCCccc-----------------hhh----HHHHHHHHHHh-----CCccEEe--ccccccCc------
Confidence                4799999998532                 222    34445555553     2 34776  23322110      


Q ss_pred             ccCCCCCCC-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          185 FDKINDPSG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       185 ~~~~~~~~~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                          .+..+ .+....| .+|.+++.+++.       .|  ++++.|+||.+.++
T Consensus       119 ----~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          119 ----DRIKPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAY  159 (321)
T ss_dssp             ----GGCCCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHH
T ss_pred             ----cccccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccc
Confidence                00011 1224578 999998877652       24  55666889887654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.47  E-value=5.3e-13  Score=116.65  Aligned_cols=156  Identities=13%  Similarity=0.081  Sum_probs=100.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh----HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++||||+|+||.+++++|++.|++|++++|+...    ..+..+++.    ...+.++.+|++|++++.++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~l~~~~~----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK----QLGAKLIEASLDDHQRLVDALK----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH----TTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH----hCCeEEEeCCCCCHHHHHHHHh----
Confidence            4689999999999999999999999999999998532    111122222    2358889999999998888765    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                         .+|+|||+++.....             .|+.++..+    ++.+++.     + -.+||+ |+ .+...  .    
T Consensus        76 ---~~d~vi~~a~~~~~~-------------~~~~~~~~l----~~aa~~~-----g~v~~~v~-S~-~g~~~--~----  122 (313)
T 1qyd_A           76 ---QVDVVISALAGGVLS-------------HHILEQLKL----VEAIKEA-----GNIKRFLP-SE-FGMDP--D----  122 (313)
T ss_dssp             ---TCSEEEECCCCSSSS-------------TTTTTHHHH----HHHHHHS-----CCCSEEEC-SC-CSSCT--T----
T ss_pred             ---CCCEEEECCccccch-------------hhHHHHHHH----HHHHHhc-----CCCceEEe-cC-CcCCc--c----
Confidence               589999999964321             134444333    4444443     2 357764 33 22110  0    


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                       .. .....+....| .+|.+++.+.+       ..|  ++++.++||++.+++
T Consensus       123 -~~-~~~~~p~~~~y-~sK~~~e~~~~-------~~g--~~~~ilrp~~~~~~~  164 (313)
T 1qyd_A          123 -IM-EHALQPGSITF-IDKRKVRRAIE-------AAS--IPYTYVSSNMFAGYF  164 (313)
T ss_dssp             -SC-CCCCSSTTHHH-HHHHHHHHHHH-------HTT--CCBCEEECCEEHHHH
T ss_pred             -cc-ccCCCCCcchH-HHHHHHHHHHH-------hcC--CCeEEEEeceecccc
Confidence             00 01112335568 99999877664       235  666778999886543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.46  E-value=4.3e-13  Score=117.71  Aligned_cols=148  Identities=13%  Similarity=0.059  Sum_probs=98.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++++||||+|+||.+++++|++.|++|++++|+........+++..    ..+.++.+|++|++++.++++       .+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            5799999999999999999999999999999987522222333322    257889999999998888775       58


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-CCeEEEEcCCcccccccCCccccCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      |+|||+++...                 +.+    .+.+++.+++.     + -.+||+ |+ .+..          ..+
T Consensus        81 d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v~-S~-~g~~----------~~~  122 (318)
T 2r6j_A           81 DVVISALAFPQ-----------------ILD----QFKILEAIKVA-----GNIKRFLP-SD-FGVE----------EDR  122 (318)
T ss_dssp             SEEEECCCGGG-----------------STT----HHHHHHHHHHH-----CCCCEEEC-SC-CSSC----------TTT
T ss_pred             CEEEECCchhh-----------------hHH----HHHHHHHHHhc-----CCCCEEEe-ec-cccC----------ccc
Confidence            99999998531                 112    34445555553     2 346763 33 2211          001


Q ss_pred             CCC-CCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          191 PSG-YNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       191 ~~~-~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      ..+ .+....| .+|.+++.+.+.       .|  +.+..++||.+..+
T Consensus       123 ~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          123 INALPPFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASY  161 (318)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHH
T ss_pred             ccCCCCcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhh
Confidence            111 1223468 999987766643       35  56666899877553

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.31  E-value=6.7e-11  Score=102.75  Aligned_cols=161  Identities=17%  Similarity=0.116  Sum_probs=100.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +||||||||.||++++++|.++|++|+++.|+...              ..   +..|     ++.      .....++|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~---~~~~-----~~~------~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GR---ITWD-----ELA------ASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TE---EEHH-----HHH------HHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ce---eecc-----hhh------HhhccCCC
Confidence            59999999999999999999999999999997432              11   1111     111      12345789


Q ss_pred             EEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          113 ILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       113 ~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      .+||+||..  ......+.......++.|+.++..+.+.+    ....   .+...+|+.||...+. +.   ....+.+
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~----~~~~---~~~~~~i~~Ss~~vyg-~~---~~~~~~E  122 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAI----TKAP---QPPKAWVLVTGVAYYQ-PS---LTAEYDE  122 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHH----HHCS---SCCSEEEEEEEGGGSC-CC---SSCCBCT
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHH----HHhC---CCceEEEEEeeeeeec-CC---CCCcccc
Confidence            999999842  22333456666777888888866655444    3321   1234566666654432 11   1223445


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +.+......|+..+...+.     .......+  +++..++|+.+..|-
T Consensus       123 ~~p~~~~~~~~~~~~~~e~-----~~~~~~~~--~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          123 DSPGGDFDFFSNLVTKWEA-----AARLPGDS--TRQVVVRSGVVLGRG  164 (298)
T ss_dssp             TCCCSCSSHHHHHHHHHHH-----HHCCSSSS--SEEEEEEECEEECTT
T ss_pred             cCCccccchhHHHHHHHHH-----HHHhhccC--CceeeeeeeeEEcCC
Confidence            5566555566655554332     12234455  788889999998875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.27  E-value=1.6e-11  Score=106.60  Aligned_cols=85  Identities=21%  Similarity=0.259  Sum_probs=72.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|+++||||+||||+++++.|++.|++|++++|+.++.++..+++....   .+.++.+|++++++++++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH----
Confidence            56789999999999999999999999999999999999888888777775431   36678899999988777655    


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                         .+|+||||+|..
T Consensus       188 ---~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 ---GAHFVFTAGAIG  199 (287)
T ss_dssp             ---TCSEEEECCCTT
T ss_pred             ---hCCEEEECCCcc
Confidence               479999999853

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.25  E-value=1.4e-11  Score=108.85  Aligned_cols=158  Identities=13%  Similarity=0.019  Sum_probs=102.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .+++||||+|+||.+++..|++.|+       +|+++++..  .........+...    .+.++ .|+++.+++.+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHhC
Confidence            4799999999999999999999996       899999874  2222222333221    11122 47766554444432


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                             +.|+|||+||.....    .++..+.+++|+.++..+++++..+- .      ...+++++|+........  
T Consensus        80 -------~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~-~------~~~~vvv~snp~~~~~~~--  139 (327)
T 1y7t_A           80 -------DADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA-K------KDVKVLVVGNPANTNALI--  139 (327)
T ss_dssp             -------TCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS-C------TTCEEEECSSSHHHHHHH--
T ss_pred             -------CCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc-C------CCeEEEEeCCchhhhHHH--
Confidence                   689999999976432    12345679999999888887776542 0      235788888754211100  


Q ss_pred             ccccCCCCCC-CCCCCccchHhHHHHHHHHHHHHHHhc
Q 023438          183 IRFDKINDPS-GYNGFRAYSQSKLANILHANELARRLK  219 (282)
Q Consensus       183 ~~~~~~~~~~-~~~~~~~y~asK~a~~~~~~~la~e~~  219 (282)
                           ..+.. +.++...|+.+|...+.+...++..+.
T Consensus       140 -----~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          140 -----AYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             -----HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             -----HHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence                 00111 244556799999998988888887664

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.10  E-value=2.6e-10  Score=94.86  Aligned_cols=78  Identities=23%  Similarity=0.292  Sum_probs=60.5

Q ss_pred             CCCCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC
Q 023438           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (282)
Q Consensus        28 ~~~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv   91 (282)
                      +++||++|||||                |||||.++|++|+++|++|++++++.. +.         .+. .+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEcc
Confidence            578999999999                699999999999999999999988652 11         011 22  24577


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        92 s~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      ++.+   .+++.+.+.++++|++|+|||+.
T Consensus        72 ~~~~---~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           72 MTAL---EMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             CSHH---HHHHHHHHHGGGCSEEEECCBCC
T ss_pred             CcHH---HHHHHHHHhcCCCCEEEECCccc
Confidence            7754   45566667788999999999975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=1.1e-09  Score=91.34  Aligned_cols=78  Identities=15%  Similarity=0.247  Sum_probs=58.1

Q ss_pred             CCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC
Q 023438           30 SGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        30 ~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      +||++|||||                ||++|.++|++|+++|++|++++|......        .. ...+..  .|+  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~-~~~~~~--~~v--   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EP-HPNLSI--REI--   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CC-CTTEEE--EEC--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cC-CCCeEE--EEH--
Confidence            5899999999                888999999999999999999998753210        00 112322  244  


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                       ++.+++++.+...++++|++|+||++.
T Consensus        69 -~s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           69 -TNTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             -CSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             -hHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence             456667777777778999999999974

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.88  E-value=1.2e-08  Score=75.58  Aligned_cols=73  Identities=22%  Similarity=0.222  Sum_probs=60.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++++|+|+ |++|.++++.|.+.| ++|++++|+.+..+...        ...+.++.+|+++.+++.++++       
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~-------   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG-------   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc-------
Confidence            478999999 999999999999999 89999999987655433        1246778899999887776653       


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      ++|++|++++
T Consensus        69 ~~d~vi~~~~   78 (118)
T 3ic5_A           69 GFDAVISAAP   78 (118)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6899999996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.78  E-value=4.8e-08  Score=88.69  Aligned_cols=82  Identities=20%  Similarity=0.336  Sum_probs=70.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC---CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G---~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++|+|| |+||+++++.|++.|   .+|++++|+.++++...+++.... +.++..+.+|++|.++++++++..    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            57999999 899999999999998   489999999999888888776532 235888999999999999999876    


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                       ++|+||||+|.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999984

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.76  E-value=7.2e-09  Score=81.67  Aligned_cols=77  Identities=13%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             ChhHHHHHHHHHHcCCEEEEEEcChhhHH---HHHHHHHHhCCCCceeEEEccCCCH--HHHHHHHHHHHhcCCCccEEE
Q 023438           41 SGIGTETARVLALRGVHVVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNIQHHQLNILI  115 (282)
Q Consensus        41 ~gIG~aia~~l~~~G~~Vii~~r~~~~~~---~~~~~l~~~~~~~~v~~~~~Dvs~~--~~i~~~~~~i~~~~g~id~vi  115 (282)
                      +-++.++++.|++.|++|++..|+.....   +..+.+.+.  +.++..+++|++++  ++++++++.+.+.+|+ |++|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45789999999999999999988755432   123334333  56788899999999  9999999999988899 9999


Q ss_pred             EcCCC
Q 023438          116 NNAGI  120 (282)
Q Consensus       116 ~~ag~  120 (282)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99995

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.65  E-value=8.7e-08  Score=84.48  Aligned_cols=79  Identities=16%  Similarity=0.266  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+.+.|++|++++++.++++.. +++     +..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            579999999999999999999999999999999987765544 332     222   23588775556665555543  5


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            7999999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.64  E-value=8.9e-08  Score=77.93  Aligned_cols=79  Identities=13%  Similarity=0.214  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+...|++|++++|+.+..+..    .+ . +..   ..+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-~-g~~---~~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-L-GVE---YVGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-T-CCS---EEEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC---EEeeCCcHHHHHHHHHHhC--CC
Confidence            579999999999999999999999999999999987664432    12 2 222   2247777654444444322  13


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.61  E-value=9.7e-08  Score=87.78  Aligned_cols=78  Identities=15%  Similarity=0.251  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |++++++|+| +|++|+++++.|++.|++|++++|+.++.+...    +.++  .+..+.+|+++.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la----~~~~--~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLS----AGVQ--HSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTT----TTCT--TEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHH----HhcC--CceEEEeecCCHHHHHHHHc------
Confidence            4578999998 799999999999999999999999976644332    2221  36778899999888877664      


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                       ++|+||||++.
T Consensus        68 -~~DvVIn~a~~   78 (450)
T 1ff9_A           68 -KHDLVISLIPY   78 (450)
T ss_dssp             -TSSEEEECCC-
T ss_pred             -CCcEEEECCcc
Confidence             68999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.57  E-value=6.8e-07  Score=78.10  Aligned_cols=84  Identities=25%  Similarity=0.303  Sum_probs=66.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC---hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~---~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++....+   +.....++.+.+++.+.+
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~---~~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD---CKAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHH
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC---CceEEeccchHHHHHhhh
Confidence            46789999999998 7999999999999999 89999999   8888888888776542   333345666666555443


Q ss_pred             HHHHhcCCCccEEEEcCCC
Q 023438          102 SEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~  120 (282)
                      .       ..|+||++.+.
T Consensus       225 ~-------~aDiIINaTp~  236 (315)
T 3tnl_A          225 A-------ESVIFTNATGV  236 (315)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------CCCEEEECccC
Confidence            3       57999999874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.56  E-value=4.2e-08  Score=84.90  Aligned_cols=81  Identities=20%  Similarity=0.310  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++|+++|||++ |+|+++++.|++.| +|++++|+.+++++..+++..... ... .+.+|+++.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~-~~~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN-KKF-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT-CCH-HHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc-ccc-ceeEEEeeH----------HH
Confidence            46789999999997 99999999999999 999999999888877777654210 000 122344441          34


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                      .++++|+||+|+|..
T Consensus       190 ~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          190 DLDGVDIIINATPIG  204 (287)
T ss_dssp             CCTTCCEEEECSCTT
T ss_pred             hhCCCCEEEECCCCC
Confidence            567899999999964

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.48  E-value=2.1e-07  Score=83.39  Aligned_cols=107  Identities=16%  Similarity=0.220  Sum_probs=72.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++++|+|+ |+||+++++.|...|++|++++|+.++++...+.+     +..   +.+|.++.+++.+++.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh-----
Confidence            477899999999 99999999999999999999999987765543322     222   4567788777776654     


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                        ..|++|+|++.....                 .+..+.+..++.|+       +++.||++++..
T Consensus       229 --~~DvVi~~~g~~~~~-----------------~~~li~~~~l~~mk-------~gg~iV~v~~~~  269 (369)
T 2eez_A          229 --HADLLIGAVLVPGAK-----------------APKLVTRDMLSLMK-------EGAVIVDVAVDQ  269 (369)
T ss_dssp             --HCSEEEECCC------------------------CCSCHHHHTTSC-------TTCEEEECC---
T ss_pred             --CCCEEEECCCCCccc-----------------cchhHHHHHHHhhc-------CCCEEEEEecCC
Confidence              579999999853210                 01223344555553       357899998754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=6.3e-07  Score=79.45  Aligned_cols=79  Identities=14%  Similarity=0.114  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|++||||.++++.+...|++|++++|+.++.+.. +++     +..   ..+|+++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEEecCccHhHHHHHHHHhCC--
Confidence            579999999999999999999999999999999987765432 222     322   224888666677666665443  


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       238 ~~D~vi~~~g  247 (347)
T 2hcy_A          238 GAHGVINVSV  247 (347)
T ss_dssp             CEEEEEECSS
T ss_pred             CCCEEEECCC
Confidence            7999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.43  E-value=5.9e-07  Score=82.83  Aligned_cols=81  Identities=14%  Similarity=0.217  Sum_probs=61.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +.++++++++|+|+ ||+|++++..|++. |++|++++|+.++++...+.    .   .+..+.+|+++.+++.++++  
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~---~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S---GSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G---TCEEEECCTTCHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c---CCcEEEEecCCHHHHHHHHc--
Confidence            35677899999997 99999999999998 78999999998776554332    1   35667899999888777664  


Q ss_pred             HhcCCCccEEEEcCCCC
Q 023438          105 NIQHHQLNILINNAGIM  121 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~  121 (282)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 689999999853

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.43  E-value=6.3e-08  Score=90.74  Aligned_cols=96  Identities=20%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh-
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~-  106 (282)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.+++++..+++     +..+.    ++.+   +       .. 
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~d---l-------~~~  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTD---L-------DNY  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTT---T-------TTC
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHH---h-------hhc
Confidence            478899999999 59999999999999999999999988877665554     21221    2222   1       11 


Q ss_pred             cCCCccEEEEcCCCCC-------CCCcCChhhHHHHHHHHHHHH
Q 023438          107 QHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGH  143 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~  143 (282)
                      ..+.+|++|||+|+..       +..+.+.+++..++++|+.+.
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            1235899999999632       123345566777788888764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.42  E-value=1.2e-06  Score=67.14  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++++|+|+ |.+|.++++.|.+.|++|++++++++..+...    +.    .+.++.+|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DE----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HC----CCcEEECCCCCHHHHHhC------Ccc
Confidence            3578999998 78999999999999999999999987654443    21    366788999998876653      234


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899998876

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.42  E-value=4.8e-07  Score=80.04  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++++...++    + +..   ..+|.++.+++.+.++++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----~-g~~---~~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK----F-GFD---DAFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----S-CCS---EEEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----c-CCc---eEEecCCHHHHHHHHHHHhC--C
Confidence            579999999999999999999999999999999987765544322    2 322   22477765455555555432  5


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.41  E-value=1.2e-06  Score=77.29  Aligned_cols=160  Identities=11%  Similarity=-0.016  Sum_probs=98.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcC----hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRD----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~----~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      ..+++||||+|+||.+++..|+..|.       +|++++++    .++++....++....  ..+   ..|+...++..+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~---~~~i~~~~~~~~   79 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPL---LAGMTAHADPMT   79 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTT---EEEEEEESSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--ccc---cCcEEEecCcHH
Confidence            35899999999999999999999885       79999998    555555555554421  011   124443333333


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      .++       +.|+|||+||...... .+   ..+.+..|+.....+++.+..+.       ++.++||++|+-......
T Consensus        80 al~-------~aD~Vi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~~-------~p~a~ii~~SNPv~~~t~  141 (329)
T 1b8p_A           80 AFK-------DADVALLVGARPRGPG-ME---RKDLLEANAQIFTVQGKAIDAVA-------SRNIKVLVVGNPANTNAY  141 (329)
T ss_dssp             HTT-------TCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHHHS-------CTTCEEEECSSSHHHHHH
T ss_pred             HhC-------CCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEEccCchHHHHH
Confidence            333       6799999999754321 12   23457778877666655554442       024689999874432210


Q ss_pred             cCCccccCCCCCC-CCCCCccchHhHHHHHHHHHHHHHHhcc
Q 023438          180 HEGIRFDKINDPS-GYNGFRAYSQSKLANILHANELARRLKE  220 (282)
Q Consensus       180 ~~~~~~~~~~~~~-~~~~~~~y~asK~a~~~~~~~la~e~~~  220 (282)
                      .       ..... ++|....|+.+..-...+...++..+.-
T Consensus       142 ~-------~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          142 I-------AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             H-------HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             H-------HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence            0       00011 3444456888776666677778877753

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.39  E-value=1e-06  Score=77.32  Aligned_cols=79  Identities=10%  Similarity=0.143  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+...|++|++++++.++++...+ +     +..   ..+|.++.+..+.+.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHhC--CC
Confidence            57999999999999999999999999999999999776554432 2     322   2247776555554444332  23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.39  E-value=1.3e-06  Score=76.85  Aligned_cols=80  Identities=11%  Similarity=0.170  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+...|++|++++|+.++++... ++     +..   ..+|.++.+..+.+.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCH---HTINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCCHHHHHHHHHHhC--CC
Confidence            5799999999999999999999999999999999977655442 22     322   2247776554444444332  13


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.36  E-value=1.5e-06  Score=77.24  Aligned_cols=80  Identities=13%  Similarity=0.156  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+...|++|++++++.++++.. +++     +..   ..+|.++.+..+.+.+...  .+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHhc--CC
Confidence            579999999999999999999999999999999998776554 333     322   2347766544444433221  13


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.35  E-value=7.2e-07  Score=68.16  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=56.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++++++|+|+ |++|..+++.|.+.|++|++++++.+..+.    +.+    .....+.+|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~----~~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YAS----YATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTT----TCSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH----hCCEEEEeCCCCHHHHHhc------CC
Confidence            45678999998 999999999999999999999998655332    211    1245677899886655432      12


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            468999999873

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.32  E-value=1.6e-06  Score=76.32  Aligned_cols=79  Identities=16%  Similarity=0.299  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|++|+||.++++.+...|++|++++++.++.+...+++     +..   ...|.++.+..+.+ .+..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~-~~~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAGL-KREC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHHH-HHHC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHHH-HHhc--CC
Confidence            5899999999999999999999999999999999987755543332     322   12466664433333 3322  34


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       218 ~~d~vi~~~g  227 (336)
T 4b7c_A          218 GIDVFFDNVG  227 (336)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.32  E-value=2.2e-06  Score=76.17  Aligned_cols=79  Identities=15%  Similarity=0.245  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+||||.++++.+...|++|++++++.++++.. +++     +..   ..+|.++.+..+.+.+...  ..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~~~~~~--~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKIKKYVG--EK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHHHHHHC--TT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHHHHHcC--CC
Confidence            579999999999999999999999999999999998765532 222     222   2247776554444433321  23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            6999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.32  E-value=2.6e-06  Score=73.45  Aligned_cols=81  Identities=16%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...+++..+.  ..+..   ++.+.+.   
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~---~l~~~l~---  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDAR---GIEDVIA---  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECST---THHHHHH---
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHH---HHHHHHh---
Confidence            4688999999998 8999999999999999 79999999999998888887664433332  33433   3333333   


Q ss_pred             hcCCCccEEEEcCCC
Q 023438          106 IQHHQLNILINNAGI  120 (282)
Q Consensus       106 ~~~g~id~vi~~ag~  120 (282)
                          ..|+||++...
T Consensus       194 ----~~DiVInaTp~  204 (283)
T 3jyo_A          194 ----AADGVVNATPM  204 (283)
T ss_dssp             ----HSSEEEECSST
T ss_pred             ----cCCEEEECCCC
Confidence                46899999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.32  E-value=1.3e-06  Score=77.69  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=56.9

Q ss_pred             CC--CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SG--LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~--~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|  ++++|+||+||||.++++.+...|+ +|++++++.++.+...++    + +..   ..+|.++.+ +.+.+.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~----~-g~~---~~~d~~~~~-~~~~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE----L-GFD---AAINYKKDN-VAEQLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----S-CCS---EEEETTTSC-HHHHHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----c-CCc---eEEecCchH-HHHHHHHhcC
Confidence            47  9999999999999999999999999 999999987665544322    2 322   235777643 3333333322


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                        +.+|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              26999999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.31  E-value=1.7e-06  Score=74.17  Aligned_cols=77  Identities=16%  Similarity=0.288  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++...  + .+.  ..|+   +++       ..
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------cc
Confidence            4678999999998 79999999999999999999999988877776665321  1 221  1232   221       11


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                        +++|+||+|++..
T Consensus       179 --~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 --HEFDLIINATSSG  191 (271)
T ss_dssp             --CCCSEEEECCSCG
T ss_pred             --CCCCEEEECCCCC
Confidence              5899999999964

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.28  E-value=8.2e-06  Score=71.14  Aligned_cols=85  Identities=19%  Similarity=0.257  Sum_probs=63.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC---hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~---~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ..++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+++....+   +.....+..+.+.+.+.+
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~---~~v~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD---CVVTVTDLADQHAFTEAL  218 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC---cceEEechHhhhhhHhhc
Confidence            46789999999998 8999999999999998 89999999   8888888888766542   222334555543333333


Q ss_pred             HHHHhcCCCccEEEEcCCCC
Q 023438          102 SEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~~  121 (282)
                      .       +.|+||++.+..
T Consensus       219 ~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          219 A-------SADILTNGTKVG  231 (312)
T ss_dssp             H-------HCSEEEECSSTT
T ss_pred             c-------CceEEEECCcCC
Confidence            2       468999998753

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.19  E-value=6.7e-06  Score=72.78  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++++|+|++|+||.++++.+... |++|++++++.++++.. +++     +...   ..|.++.+..+.+ .++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~-~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GADY---VINASMQDPLAEI-RRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCSE---EEETTTSCHHHHH-HHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCE---EecCCCccHHHHH-HHHhcC-
Confidence            5799999999999999999999999 99999999988775544 232     3221   2366664433332 222221 


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            479999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.19  E-value=1.3e-05  Score=62.32  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=58.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh-hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |..+.++|+|+ |.+|..+++.|.+.|++|++++++. +..+...+..     ...+.++.+|.++++.+.+.      .
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~   68 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------G   68 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------T
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------C
Confidence            34577889986 9999999999999999999999974 4433333221     22477889999998766543      1


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (153)
T 1id1_A           69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             hhhCCEEEEecC
Confidence            236789998876

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.15  E-value=1e-05  Score=71.80  Aligned_cols=79  Identities=19%  Similarity=0.286  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++++... ++     +...   ..|.++.+..+.+.+ ..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~~~~~~~~~~~~~~~-~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAKR---GINYRSEDFAAVIKA-ET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHH-HH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEeCCchHHHHHHHH-Hh--CC
Confidence            5789999999999999999999999999999999988765443 22     3221   246655443333333 32  45


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999983

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.13  E-value=3.5e-05  Score=67.71  Aligned_cols=105  Identities=18%  Similarity=0.159  Sum_probs=66.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+++||||+|.+|.+++..|++.|  .+|++++++.+  .....++.......++..    +++.+++.+.++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            579999999999999999999998  78999998765  223333433211111211    223344444433       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  153 (282)
                      +.|+||++||...... .+.+   +.+..|+.....+++.+..+
T Consensus        76 gaDvVi~~ag~~~~~g-~~r~---dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG-MTRD---DLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             TCSEEEECCCCCCCSS-CCCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCcCCCCC-CCHH---HHHHHHHHHHHHHHHHHHhh
Confidence            6799999999754322 1222   34777888766666655544

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.10  E-value=1.3e-05  Score=70.80  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|++|+||.++++.+...|++|++++++.++++... ++     +...   .+|.++.+ +.+.+.++.. ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~-~~~~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPD-WPKEVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence            5789999999999999999999999999999999987765542 22     3221   24777643 3333333221 23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|+++|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.09  E-value=2.8e-05  Score=58.87  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=55.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++++.+..+..    .+.+   .+.++..|.++.+.+.+      ....+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~----~~~~---~~~~~~~d~~~~~~l~~------~~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA----SAEI---DALVINGDCTKIKTLED------AGIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHC---SSEEEESCTTSHHHHHH------TTTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HHhc---CcEEEEcCCCCHHHHHH------cCccc
Confidence            457899987 9999999999999999999999987664433    2222   35567789988765432      11346


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      .|++|.+++
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.07  E-value=1.5e-05  Score=69.84  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++++... ++     +...   ..|.++.+..+.+.+...  ..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~~~~~~~--~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE---TIDYSHEDVAKRVLELTD--GK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCccHHHHHHHHhC--CC
Confidence            5799999999999999999999999999999999887765443 22     3221   235555443333333221  23


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999983

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.06  E-value=1.7e-05  Score=67.05  Aligned_cols=82  Identities=13%  Similarity=0.280  Sum_probs=65.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++++++|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56789999997 7999999999999997 899999997                   67788888888877776777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .++++ +.+.++++       +.|+||.+..
T Consensus       108 ~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             ccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            77763 33444333       6799998865

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.06  E-value=1.3e-05  Score=70.43  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++++.. +++     +...   ..|.++.+..+.+.+.. . ..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~~---~~~~~~~~~~~~~~~~~-~-~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAEY---LINASKEDILRQVLKFT-N-GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSE---EEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEeCCCchHHHHHHHHh-C-CC
Confidence            579999999999999999999999999999999987765532 222     3221   23555544333333322 1 23


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++++|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999983

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=98.04  E-value=3.4e-05  Score=66.51  Aligned_cols=90  Identities=12%  Similarity=0.272  Sum_probs=72.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh------------------hhHHHHHHHHHHhCCCCceeEEEc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMEL   89 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~------------------~~~~~~~~~l~~~~~~~~v~~~~~   89 (282)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+...+.+.+.+|..++..+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            56789999998 8999999999999997 899999876                  567778888888888888999988


Q ss_pred             cCCCHHHHHHHHHHHHhc----CCCccEEEEcCC
Q 023438           90 DLSSLASVRNFASEYNIQ----HHQLNILINNAG  119 (282)
Q Consensus        90 Dvs~~~~i~~~~~~i~~~----~g~id~vi~~ag  119 (282)
                      ++++.+.++.+++.+...    ..++|+||.+..
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            998877777777655321    136899997764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.04  E-value=1.6e-05  Score=70.08  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|++|+||.++++.+...|++|++++++.++.+... ++     +...   ..|.++.+..+.+.+..  ...
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----ga~~---~~~~~~~~~~~~~~~~~--~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RL-----GAAY---VIDTSTAPLYETVMELT--NGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hC-----CCcE---EEeCCcccHHHHHHHHh--CCC
Confidence            5799999999999999999999999999999999988765543 22     3222   23555543333333221  123


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            69999999983

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.02  E-value=2.2e-05  Score=70.07  Aligned_cols=76  Identities=18%  Similarity=0.265  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.-+.++|+|.|| |++|+.+|+.|++ .++|.+++++.+.++..         ...+..+.+|++|.+++.++++    
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT----
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh----
Confidence            3344457999998 9999999999875 57999999997765443         1246678899999998888765    


Q ss_pred             cCCCccEEEEcCCC
Q 023438          107 QHHQLNILINNAGI  120 (282)
Q Consensus       107 ~~g~id~vi~~ag~  120 (282)
                         +.|+||++++.
T Consensus        77 ---~~DvVi~~~p~   87 (365)
T 3abi_A           77 ---EFELVIGALPG   87 (365)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEEecCC
Confidence               56999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.00  E-value=1.3e-05  Score=68.59  Aligned_cols=77  Identities=16%  Similarity=0.225  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...  + .+..  .|+   +++.        
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~~~--------  177 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DSIP--------  177 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GGCC--------
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HHhc--------
Confidence            4678999999998 79999999999999999999999998888777666331  1 2222  232   1110        


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                      . ++.|+||++++..
T Consensus       178 ~-~~~DivIn~t~~~  191 (272)
T 1p77_A          178 L-QTYDLVINATSAG  191 (272)
T ss_dssp             C-SCCSEEEECCCC-
T ss_pred             c-CCCCEEEECCCCC
Confidence            1 4789999999864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.98  E-value=1.6e-05  Score=72.88  Aligned_cols=84  Identities=17%  Similarity=0.245  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEE--ccCC---------CHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS---------SLASVR   98 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~--~Dvs---------~~~~i~   98 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++++.. +++     +....+-.  .|+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL-----GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCCEEEecccccccccccccccccchhhh
Confidence            579999999999999999999999999999999887765543 222     33222211  1221         123444


Q ss_pred             HHHHHHHhcC-CCccEEEEcCC
Q 023438           99 NFASEYNIQH-HQLNILINNAG  119 (282)
Q Consensus        99 ~~~~~i~~~~-g~id~vi~~ag  119 (282)
                      .+.+.+.+.. +.+|++|.++|
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHHhCCCceEEEECCC
Confidence            4455554433 36999999998

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.95  E-value=1.5e-05  Score=69.64  Aligned_cols=157  Identities=14%  Similarity=0.139  Sum_probs=90.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEc--ChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r--~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++||||+|++|.+++..|+..|.  ++.++++  +.+.++.....+....+  +..+.....|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            689999999999999999998885  6888998  66555443444433211  1122222111    01111       


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      .+.+.|+|||+||...... .+   ....+..|+.....+++++..+-         .+.|+++|.........      
T Consensus        71 al~gaD~Vi~~Ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~~---------~~~vlv~SNPv~~~t~~------  131 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG-MS---RMDLAKTNAKIVGKYAKKIAEIC---------DTKIFVITNPVDVMTYK------  131 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHHHC---------CCEEEECSSSHHHHHHH------
T ss_pred             HhCCCCEEEECCCCCCCCC-Cc---HHHHHHHHHHHHHHHHHHHHHhC---------CeEEEEecCcHHHHHHH------
Confidence            1237899999999754322 12   23457888888666666665542         23555555533322100      


Q ss_pred             CCCCCCCCCCCccchH-hHHHHHHHHHHHHHHhcc
Q 023438          187 KINDPSGYNGFRAYSQ-SKLANILHANELARRLKE  220 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~a-sK~a~~~~~~~la~e~~~  220 (282)
                       +....+.|....++. +..-...+...++..+.-
T Consensus       132 -~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv  165 (313)
T 1hye_A          132 -ALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGV  165 (313)
T ss_dssp             -HHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTC
T ss_pred             -HHHhhCcChhcEEEeCccHHHHHHHHHHHHHhCc
Confidence             001123455556776 665556667777777653

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.94  E-value=4.2e-05  Score=67.54  Aligned_cols=79  Identities=27%  Similarity=0.342  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++.+... ++     +... .  .|..  +++.+.+.+... ..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~-v--~~~~--~~~~~~v~~~~~-~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GADI-V--LPLE--EGWAKAVREATG-GA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE-E--EESS--TTHHHHHHHHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcE-E--ecCc--hhHHHHHHHHhC-CC
Confidence            5899999999999999999999999999999999887764433 33     3222 2  2443  233333333221 12


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.91  E-value=4.5e-06  Score=76.63  Aligned_cols=46  Identities=22%  Similarity=0.272  Sum_probs=40.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      .+.+.||+++|||++ +||+++|+.|+..|++|++++++.....+..
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            456899999999987 9999999999999999999999977655543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.90  E-value=2.4e-05  Score=67.86  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..     ...    ++.+.+++.       
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~-----~~~----~~~~~~~~~-------  199 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE-----RRS----AYFSLAEAE-------  199 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS-----SSC----CEECHHHHH-------
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh-----ccC----ceeeHHHHH-------
Confidence            4678999999998 7999999999999998 899999998887666554411     100    111222222       


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                      +...+.|+||++++..
T Consensus       200 ~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          200 TRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HTGGGCSEEEECSCTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            2234789999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.90  E-value=3.1e-05  Score=68.96  Aligned_cols=75  Identities=17%  Similarity=0.231  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh---hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ++|++++|+|+ |+||.++++.+...|++|++++++.   ++.+. .+++     +  ...+  | ++ +..+.+.+ . 
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~-----g--a~~v--~-~~-~~~~~~~~-~-  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET-----K--TNYY--N-SS-NGYDKLKD-S-  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH-----T--CEEE--E-CT-TCSHHHHH-H-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh-----C--Ccee--c-hH-HHHHHHHH-h-
Confidence            45999999999 9999999999999999999999987   55432 2333     3  2333  5 54 22233322 2 


Q ss_pred             hcCCCccEEEEcCCC
Q 023438          106 IQHHQLNILINNAGI  120 (282)
Q Consensus       106 ~~~g~id~vi~~ag~  120 (282)
                      .  +.+|++|.++|.
T Consensus       244 ~--~~~d~vid~~g~  256 (366)
T 2cdc_A          244 V--GKFDVIIDATGA  256 (366)
T ss_dssp             H--CCEEEEEECCCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  579999999984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.87  E-value=0.00024  Score=61.63  Aligned_cols=154  Identities=13%  Similarity=0.107  Sum_probs=85.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEc--ChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r--~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||||+|++|.+++..|+..|.  ++.++++  +.++++....++.+... ...+.... +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            689999999999999999999885  6899998  77655544444443211 11222222 2  2221           


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  187 (282)
                      +.+.|+||++||....... +.   .+.+..|+.....+++    .+.+.    +..+.|+++|.........       
T Consensus        68 ~~~aDvVi~~ag~~~~~g~-~r---~dl~~~N~~i~~~i~~----~i~~~----~p~~~viv~SNPv~~~~~~-------  128 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPGQ-TR---IDLAGDNAPIMEDIQS----SLDEH----NDDYISLTTSNPVDLLNRH-------  128 (303)
T ss_dssp             GTTCSEEEECCCCCCCTTC-CH---HHHHHHHHHHHHHHHH----HHHTT----CSCCEEEECCSSHHHHHHH-------
T ss_pred             hCCCCEEEEcCCCCCCCCC-CH---HHHHHHHHHHHHHHHH----HHHHH----CCCcEEEEeCChHHHHHHH-------
Confidence            2378999999997543221 22   2347777777554444    44443    1345555555433222100       


Q ss_pred             CCCCCCCCCCccchH-hHHHHHHHHHHHHHHhc
Q 023438          188 INDPSGYNGFRAYSQ-SKLANILHANELARRLK  219 (282)
Q Consensus       188 ~~~~~~~~~~~~y~a-sK~a~~~~~~~la~e~~  219 (282)
                      +....+.|....++. +-.-...+...++..+.
T Consensus       129 ~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          129 LYEAGDRSREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             HHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCHHHeeecccchhHHHHHHHHHHHhC
Confidence            001113444445555 33333445556666664

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.86  E-value=6.1e-05  Score=69.17  Aligned_cols=84  Identities=13%  Similarity=0.213  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEE--cc--------CCCHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LD--------LSSLASVRN   99 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~--~D--------vs~~~~i~~   99 (282)
                      .|.+++|+|++|+||...++.+...|++|++++++.++++.+ +++     +....+-.  .|        ..+.++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            578999999999999999999999999999999887765544 333     32221111  11        234556666


Q ss_pred             HHHHHHhcC--CCccEEEEcCC
Q 023438          100 FASEYNIQH--HQLNILINNAG  119 (282)
Q Consensus       100 ~~~~i~~~~--g~id~vi~~ag  119 (282)
                      +.+.+.+..  ..+|++|.++|
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCC
Confidence            666666533  37999999998

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.84  E-value=0.00011  Score=63.18  Aligned_cols=76  Identities=17%  Similarity=0.261  Sum_probs=58.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++++++++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++....   .+.....     +++.      
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~~-----~~l~------  185 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQAF-----EQLK------  185 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEEG-----GGCC------
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEeeH-----HHhc------
Confidence            35688999999998 7999999999999997 99999999999888887775431   2333322     1110      


Q ss_pred             HhcCCCccEEEEcCCC
Q 023438          105 NIQHHQLNILINNAGI  120 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~  120 (282)
                          ...|+||++.+.
T Consensus       186 ----~~aDiIInaTp~  197 (281)
T 3o8q_A          186 ----QSYDVIINSTSA  197 (281)
T ss_dssp             ----SCEEEEEECSCC
T ss_pred             ----CCCCEEEEcCcC
Confidence                378999999875

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.83  E-value=7.1e-05  Score=63.98  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=56.9

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++..    ..+..+  +..+   +.      
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~---l~------  178 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEA---LE------  178 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGG---GT------
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHH---hc------
Confidence            35688999999998 7999999999999996 899999999888877776532    123332  2221   11      


Q ss_pred             HhcCCCccEEEEcCCC
Q 023438          105 NIQHHQLNILINNAGI  120 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~  120 (282)
                       .  ...|+||++.+.
T Consensus       179 -~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 -G--QSFDIVVNATSA  191 (272)
T ss_dssp             -T--CCCSEEEECSSG
T ss_pred             -c--cCCCEEEECCCC
Confidence             1  368999999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.80  E-value=0.00011  Score=64.98  Aligned_cols=79  Identities=14%  Similarity=0.059  Sum_probs=55.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++++|+||+|+||.++++.+...|++|++++++.++.+... ++     +...   ..|.++.+..+.+.+....  ..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH---VLNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE---EEETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCcHHHHHHHHHHhcC--CC
Confidence            489999999999999999999999999999999888765543 33     3221   2355553333333332221  26


Q ss_pred             ccEEEEcCCC
Q 023438          111 LNILINNAGI  120 (282)
Q Consensus       111 id~vi~~ag~  120 (282)
                      +|+++.|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.80  E-value=0.0001  Score=57.28  Aligned_cols=80  Identities=10%  Similarity=0.098  Sum_probs=56.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..+..+++++|+|+ |.+|..+++.|.+.|++|++++|+.+..+...+       ...+..+..|.++.+.+.+.     
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~-----   80 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC-----   80 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT-----
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc-----
Confidence            34566789999996 999999999999999999999999776433210       11345677888876543321     


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                       ...+.|++|.+.+
T Consensus        81 -~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 -GMEKADMVFAFTN   93 (155)
T ss_dssp             -TGGGCSEEEECSS
T ss_pred             -CcccCCEEEEEeC
Confidence             1236799999987

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.79  E-value=6.6e-05  Score=66.81  Aligned_cols=78  Identities=14%  Similarity=0.213  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++.+... +    . +...   ..|.++. ++.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~----~-Ga~~---~~~~~~~-~~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-S----L-GCDR---PINYKTE-PVGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----T-TCSE---EEETTTS-CHHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-H----c-CCcE---EEecCCh-hHHHHHHHhc--CC
Confidence            5789999999999999999999999999999999876654432 2    2 3221   1355443 3333333332  24


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|++|.|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.78  E-value=5.5e-05  Score=60.40  Aligned_cols=79  Identities=14%  Similarity=0.109  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++.++.++|.|+ |.+|..+++.|.+. |++|++++++.+..+..    .+.    .+..+.+|.++.+.+.++     
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~----g~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE----GRNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT----TCCEEECCTTCHHHHHTB-----
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC----CCCEEEcCCCCHHHHHhc-----
Confidence            4566778899985 99999999999999 99999999998765443    222    355677899987654422     


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                      ....+.|++|.+.+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01346899998876

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.78  E-value=0.0001  Score=65.58  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++++|+|+ |++|+++++.+...|++|++++|+.++++...+....     .+..   +..+.+++.+.+.     
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~-----  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNSAEIETAVA-----  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCHHHHHHHHc-----
Confidence            366799999999 9999999999999999999999998887665443311     2211   2233444443332     


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                        ..|++|++++..
T Consensus       230 --~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 --EADLLIGAVLVP  241 (361)
T ss_dssp             --TCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              689999999863

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.77  E-value=0.00013  Score=55.77  Aligned_cols=73  Identities=12%  Similarity=0.070  Sum_probs=56.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +.++|.|+ |.+|..+++.|.+.|++|++++++++..+...    +.    .+.++.+|.++++.++++      ...+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~----g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER----GVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc----CCCEEECCCCCHHHHHhc------CcccC
Confidence            45777787 89999999999999999999999987755433    21    466788999998766543      12267


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88888876

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.77  E-value=9.7e-05  Score=66.16  Aligned_cols=78  Identities=15%  Similarity=0.175  Sum_probs=57.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+.+++++|+|+ |+||.++++.+...|++|++++|+.+.++...+.+     +..+   ..+.++.+++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 99999999999999999999999987765543322     2222   123445555555543     


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                        ..|+||.+++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              579999998853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.75  E-value=0.00012  Score=64.35  Aligned_cols=77  Identities=16%  Similarity=0.105  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|+ |+||.++++.+...|++|+.++++.++.+... ++     +..   ..+|.++.+ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD---LVVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS---EEECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC---EEecCCCcc-HHHHHHHHh---C
Confidence            5789999999 88999999999999999999999877765432 22     322   124776543 333333332   5


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.75  E-value=0.00018  Score=63.53  Aligned_cols=77  Identities=14%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|++++++.++.+...+ +     +... .  .|..+  ++.+.+.++  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-v--i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI-V--LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE-E--ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-E--EECCc--cHHHHHHHh--CCC
Confidence            58999999999999999999999999999999998776554332 3     3221 1  24433  233333333  234


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.|+|
T Consensus       217 g~Dvv~d~~g  226 (346)
T 3fbg_A          217 LVDYVFCTFN  226 (346)
T ss_dssp             CEEEEEESSC
T ss_pred             CccEEEECCC
Confidence            7999999998

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.72  E-value=0.00014  Score=64.11  Aligned_cols=76  Identities=20%  Similarity=0.370  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|+++||+||+|+||.++++.+...|++|+++ ++.++++.. +++     +..  .  +| .+ +++...+.+... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~--~--i~-~~-~~~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GAT--P--ID-AS-REPEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSE--E--EE-TT-SCHHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCC--E--ec-cC-CCHHHHHHHHhc-CC
Confidence            57899999999999999999999999999988 766654432 333     332  2  34 33 333333333222 23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.|+|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.67  E-value=0.00011  Score=63.60  Aligned_cols=74  Identities=15%  Similarity=0.204  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|++|++|.++++.+...|++|+.++++.++.+... ++     +...   ..|..+.+++   .+.+    +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~---~~~~~~~~~~---~~~~----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEE---AATYAEVPER---AKAW----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSE---EEEGGGHHHH---HHHT----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEECCcchhH---HHHh----c
Confidence            5899999999999999999999999999999999887765542 22     3221   1354441222   2222    4


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|. +|.
T Consensus       189 ~~d~vid-~g~  198 (302)
T 1iz0_A          189 GLDLVLE-VRG  198 (302)
T ss_dssp             SEEEEEE-CSC
T ss_pred             CceEEEE-CCH
Confidence            7999999 883

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.66  E-value=0.00017  Score=60.92  Aligned_cols=82  Identities=17%  Similarity=0.314  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            57789999998 7899999999999998 788887653                   56677777888877777777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .+++. +.+..+++       +.|+||.+..
T Consensus       105 ~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             SCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             ccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            66654 44444444       4689998754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.64  E-value=6.1e-05  Score=57.79  Aligned_cols=72  Identities=13%  Similarity=0.217  Sum_probs=52.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++++|+|+ |++|.++++.|.+.|++|++++|+.++.+...+++     +  +...  +..+   +.+.++       +
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~--~~~~--~~~~---~~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----E--YEYV--LIND---IDSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----T--CEEE--ECSC---HHHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----C--CceE--eecC---HHHHhc-------C
Confidence            789999997 99999999999999999999999988876665554     2  1111  2223   333332       5


Q ss_pred             ccEEEEcCCCCC
Q 023438          111 LNILINNAGIMG  122 (282)
Q Consensus       111 id~vi~~ag~~~  122 (282)
                      .|++|.+.+...
T Consensus        81 ~Divi~at~~~~   92 (144)
T 3oj0_A           81 NDVIITATSSKT   92 (144)
T ss_dssp             CSEEEECSCCSS
T ss_pred             CCEEEEeCCCCC
Confidence            799999988543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.61  E-value=0.00029  Score=57.91  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=56.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++|+|+ |.+|.++++.|.+.|++|++++++++..+...+.    .   .+.++.+|.++++.++++      ...+.|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~---~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----L---KATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----S---SSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----c---CCeEEEcCCCCHHHHHhc------CcccCC
Confidence            5899997 9999999999999999999999998775544322    1   366789999998766543      123678


Q ss_pred             EEEEcCC
Q 023438          113 ILINNAG  119 (282)
Q Consensus       113 ~vi~~ag  119 (282)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            8888776

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.61  E-value=0.00021  Score=63.54  Aligned_cols=75  Identities=13%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|+ |+||.++++.+...|++|++++++.++.+...+++     +...   ..|..+.+.+.+       ..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~~~~~~-------~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQEQMQA-------AAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCHHHHHH-------TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCHHHHHH-------hhC
Confidence            6899999996 99999999999999999999999887765543232     3221   246666443322       224


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.60  E-value=0.00017  Score=62.54  Aligned_cols=93  Identities=16%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             CCCCCE-EEEecCCC-----------------h-hHHHHHHHHHHcCCEEEEEEcChhhHHHHH-----HHHHHhC----
Q 023438           28 DGSGLT-AIVTGATS-----------------G-IGTETARVLALRGVHVVMGVRDIAAGKDVK-----ETIVKEI----   79 (282)
Q Consensus        28 ~~~~~~-~lItG~s~-----------------g-IG~aia~~l~~~G~~Vii~~r~~~~~~~~~-----~~l~~~~----   79 (282)
                      +++||+ +|||+|..                 | .|.++|++++++|++|+++.+.... ....     ..+.+..    
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl-~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA-FPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC-CTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCc-CcchhccCccchhhhhcccc
Confidence            368888 99998765                 5 9999999999999999999885431 1100     0011100    


Q ss_pred             -CCCceeEEEccCCCHHHHHHHHHHH------------------------------HhcCCCccEEEEcCCCC
Q 023438           80 -PSAKVDAMELDLSSLASVRNFASEY------------------------------NIQHHQLNILINNAGIM  121 (282)
Q Consensus        80 -~~~~v~~~~~Dvs~~~~i~~~~~~i------------------------------~~~~g~id~vi~~ag~~  121 (282)
                       ....+..+.+|+...+++.+.+...                              ...+++.|++|++|++.
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence             0122445666776666655555432                              23457899999999975

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.58  E-value=0.00076  Score=59.47  Aligned_cols=120  Identities=13%  Similarity=0.075  Sum_probs=73.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |+++++.|+|++|.+|.++|..++..|.  +|+++|.+.++++....++.... +..++.+       ..+....+    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al----   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEAL----   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHh----
Confidence            5678999999999999999999999994  89999999887776666665531 1112211       11122222    


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCe-EEEEcCCc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGR-IINVSSEG  174 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~-iv~vsS~~  174 (282)
                         .+.|++|.+||....+. .+   -.+.+..|..-    ++.+.+.+.+..    +.+. ++++|.-.
T Consensus        75 ---~dADvVvitaG~p~kpG-~~---R~dLl~~N~~I----~~~i~~~i~~~~----p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 ---TDAKYIVSSGGAPRKEG-MT---REDLLKGNAEI----AAQLGKDIKSYC----PDCKHVIIIFNPA  129 (343)
T ss_dssp             ---TTEEEEEECCC--------C---HHHHHHHHHHH----HHHHHHHHHHHC----TTCCEEEECSSSH
T ss_pred             ---CCCCEEEEccCCCCCCC-CC---HHHHHHHHHHH----HHHHHHHHHHhc----cCcEEEEEecCch
Confidence               26799999999754322 12   22335555544    555566665542    3454 67777643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.54  E-value=0.0021  Score=55.91  Aligned_cols=118  Identities=17%  Similarity=0.166  Sum_probs=70.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.|+||+|.+|..++..|+..|  .+|+++++++  .+....++.+.....++..+.    ..++.+..++       +
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            58999999999999999999988  6899999987  333333443321111121110    0123333333       6


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .|++|+++|...... .+..+   .+..|+..    ++.+.+.+.+.    ++.+.++++|.-..
T Consensus        69 aDvVvi~ag~~~~~g-~~r~d---l~~~n~~i----~~~i~~~i~~~----~p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MTRDD---LFNTNATI----VATLTAACAQH----CPDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCTT-CCGGG---GHHHHHHH----HHHHHHHHHHH----CTTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCCC-CcHHH---HHHHHHHH----HHHHHHHHHhh----CCCeEEEEECCCcc
Confidence            799999999754322 12222   35555555    44444444443    14578888877544

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.52  E-value=0.00031  Score=62.66  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|+||.++++.+...|++|+.+++ .++.+. .+++     +...   ..|.++.+..+    ++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~l-----Ga~~---v~~~~~~~~~~----~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKL-----GADD---VIDYKSGSVEE----QLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHT-----TCSE---EEETTSSCHHH----HHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHc-----CCCE---EEECCchHHHH----HHhh-cC
Confidence            5789999999999999999999999999998884 444332 2222     3221   13555433222    2222 25


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.52  E-value=0.00035  Score=61.30  Aligned_cols=63  Identities=14%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            367899999998 8999999999999997 788988754                   4567777888888887777777


Q ss_pred             EccC
Q 023438           88 ELDL   91 (282)
Q Consensus        88 ~~Dv   91 (282)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.51  E-value=0.0023  Score=55.96  Aligned_cols=119  Identities=13%  Similarity=0.019  Sum_probs=77.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC--CceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +.+++.|+|+ |.+|.++|..|+..|.  +|++++++.+.++....++....+-  ..+.....|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            3468999996 9999999999999997  8999999988887766667654221  123333222   1           


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +...+.|++|.++|....+. .+.   .+.+..|..-    ++...+.+.+.    ++.+.++++|.-..
T Consensus        69 ~a~~~aDvVvi~ag~p~kpG-~~R---~dL~~~N~~I----v~~i~~~I~~~----~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKPG-ETR---LELVEKNLKI----FKGIVSEVMAS----GFDGIFLVATNPVD  126 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHHHH----HHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             HHhCCCCEEEEecccCCCCC-ccH---HHHHHHHHHH----HHHHHHHHHHh----cCCeEEEEcCChHH
Confidence            11236799999999754332 122   2235555543    55555555554    24678888887443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.48  E-value=0.0039  Score=54.64  Aligned_cols=121  Identities=12%  Similarity=0.064  Sum_probs=78.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHh--CCCCceeEEEccCCCHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~--~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ....+++.|+|+ |.+|.++|..|+..|.  +|++++.+.+.++....++...  ++.. ...+..  .|.+        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~--------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYS--------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHH--------
Confidence            345688999998 9999999999999997  8999999988888777777653  2111 111211  1221        


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                         ...+.|++|.+||....+- .+-.+   .++.|..    +++.+.+.+.+.    ++.+.++++|.-..
T Consensus        84 ---~~~~aDiVvi~aG~~~kpG-~tR~d---L~~~N~~----I~~~i~~~i~~~----~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 ---VTANSKLVIITAGARQQEG-ESRLN---LVQRNVN----IFKFIIPNVVKY----SPQCKLLIVSNPVD  140 (331)
T ss_dssp             ---GGTTEEEEEECCSCCCCTT-CCGGG---GHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             ---HhCCCCEEEEccCCCCCCC-ccHHH---HHHHHHH----HHHHHHHHHHHH----CCCeEEEEecChHH
Confidence               1237899999999765432 23332   3455544    355555555554    24678888887443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.46  E-value=0.00059  Score=61.60  Aligned_cols=74  Identities=18%  Similarity=0.321  Sum_probs=55.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++.|++++|.|+ |++|.++++.|...|+ +|++++|+.++.++..+++     +..  .  .+.   +++..++.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~---~~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRF---DELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCG---GGHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecH---HhHHHHhc----
Confidence            478999999998 9999999999999999 8999999987765555544     222  1  222   33443332    


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                         ..|+||.+.+..
T Consensus       227 ---~aDvVi~at~~~  238 (404)
T 1gpj_A          227 ---RSDVVVSATAAP  238 (404)
T ss_dssp             ---TCSEEEECCSSS
T ss_pred             ---CCCEEEEccCCC
Confidence               679999998754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.44  E-value=0.0011  Score=58.77  Aligned_cols=83  Identities=19%  Similarity=0.117  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|+++||+|+ |++|...++.+...|++ |++++++.++.+... ++     ...+..+..|-.+.+++.+.+.+... .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-----CPEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-----CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----chhcccccccccchHHHHHHHHHHhC-C
Confidence            5789999998 99999999999899997 999998887755433 33     22344555565555655554444321 2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|+++.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.43  E-value=0.00051  Score=60.54  Aligned_cols=79  Identities=16%  Similarity=0.187  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++++|+|+ |+||.++++.+...|+ +|++++++.++.+... ++     +...   ..|..+.+ +.+.+.++.. .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~-~~~~v~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEED-VVKEVMDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCcC-HHHHHHHHcC-C
Confidence            7899999999 9999999999999999 8999999877654432 33     3221   13555433 3332332211 1


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999983

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.42  E-value=0.00027  Score=57.65  Aligned_cols=42  Identities=24%  Similarity=0.301  Sum_probs=36.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~   74 (282)
                      +++|+||+|.+|.++++.|++.|++|++++|+.+..+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998776665443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.42  E-value=0.00077  Score=59.81  Aligned_cols=78  Identities=13%  Similarity=0.134  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+| +|++|.+.++.+...|++|++++++.++++.. +++     +... .  .| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~-v--i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADH-G--IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE-E--EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCE-E--Ec-CCcccHHHHHHHHhC-CC
Confidence            578999999 89999999999999999999999988775553 333     3321 1  24 443344443333322 22


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.38  E-value=0.00066  Score=60.18  Aligned_cols=85  Identities=16%  Similarity=0.189  Sum_probs=52.3

Q ss_pred             CC-CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH--HHHHHHHHHHH-
Q 023438           30 SG-LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYN-  105 (282)
Q Consensus        30 ~~-~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~--~~i~~~~~~i~-  105 (282)
                      .| .+++|+||+|++|...++.+...|++|++++++.+...+..+.+++ + +... .+  |..+.  +++.+.+.++. 
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-l-Ga~~-vi--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-L-GATQ-VI--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-H-TCSE-EE--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-c-CCeE-EE--ecCccchHHHHHHHHHHhh
Confidence            47 8999999999999999998888999999988776542222222222 1 3221 11  22210  22222233222 


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                      ...+.+|++|.++|
T Consensus       241 ~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          241 QSGGEAKLALNCVG  254 (364)
T ss_dssp             HHTCCEEEEEESSC
T ss_pred             ccCCCceEEEECCC
Confidence            01247999999998

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.37  E-value=0.00038  Score=61.72  Aligned_cols=82  Identities=17%  Similarity=0.332  Sum_probs=65.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            56789999998 8999999999999997 799998763                   25566777788888888888888


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .+++...++.       . +.++|+||.+..
T Consensus       195 ~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          195 LNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             CCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             cccCchhhhh-------H-hccCCEEEEecC
Confidence            8888755322       2 457899998764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.34  E-value=0.00096  Score=58.88  Aligned_cols=81  Identities=21%  Similarity=0.161  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHh-c
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNI-Q  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~-~  107 (282)
                      .|++++|+|+ |++|...++.+...|++|++++++.++.+... ++     +.. .  ..|.++ .+..+.+.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-V--TLVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-E--EEcCcccccHHHHHHHHhcccc
Confidence            5789999997 89999999998899999999999877654432 22     332 1  235543 3333333332210 1


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|.++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999983

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.33  E-value=0.00069  Score=63.69  Aligned_cols=90  Identities=11%  Similarity=0.140  Sum_probs=63.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            67899999998 8999999999999997 799998764                   45677788888888887888777


Q ss_pred             ccC-------CCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDL-------SSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dv-------s~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .++       ++.+....-.+.+.+...+.|+||.+..
T Consensus       403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          403 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             ccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            665       2221111011112222236799998875

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.28  E-value=0.00035  Score=61.06  Aligned_cols=75  Identities=23%  Similarity=0.298  Sum_probs=49.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++|+|++|++|..+++.+...|++|++++++.++.+.. +++     +... .  .|..+.+  ...++.+  ..+.+|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL-----GAKE-V--LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT-----TCSE-E--EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHc-----CCcE-E--EecCCcH--HHHHHHh--cCCccc
Confidence            799999999999999999999999999999987765543 222     3221 1  3554432  2222222  124699


Q ss_pred             EEEEcCCC
Q 023438          113 ILINNAGI  120 (282)
Q Consensus       113 ~vi~~ag~  120 (282)
                      ++|.++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999983

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.24  E-value=0.0026  Score=55.62  Aligned_cols=121  Identities=13%  Similarity=0.165  Sum_probs=72.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .+.+++++.|+|+ |.+|.++|..|+..|.  +|++++++++.++....++....+- ..+.....|   .         
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~---------   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y---------   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H---------
Confidence            3456688999996 9999999999999987  8999999988887777777653210 122222211   1         


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                        +...+.|++|.+||....+. .+.   .+.++.|..    +++.+.+.+.+.    ++.+.++++|.-.
T Consensus        72 --~a~~~aDiVvi~ag~~~kpG-~tR---~dL~~~N~~----I~~~i~~~i~~~----~p~a~ilvvtNPv  128 (326)
T 3vku_A           72 --SDAKDADLVVITAGAPQKPG-ETR---LDLVNKNLK----ILKSIVDPIVDS----GFNGIFLVAANPV  128 (326)
T ss_dssp             --GGGTTCSEEEECCCCC------------------------CHHHHHHHHHTT----TCCSEEEECSSSH
T ss_pred             --HHhcCCCEEEECCCCCCCCC-chH---HHHHHHHHH----HHHHHHHHHHhc----CCceEEEEccCch
Confidence              12347899999999754322 121   223444443    455666666654    2467888887743

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.24  E-value=0.00067  Score=63.70  Aligned_cols=63  Identities=14%  Similarity=0.211  Sum_probs=51.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC-------------------hhhHHHHHHHHHHhCCCCceeEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~-------------------~~~~~~~~~~l~~~~~~~~v~~~   87 (282)
                      .+++.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            467889999998 8999999999999998 79999755                   24677788888888887778777


Q ss_pred             EccC
Q 023438           88 ELDL   91 (282)
Q Consensus        88 ~~Dv   91 (282)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.24  E-value=0.00087  Score=58.87  Aligned_cols=120  Identities=13%  Similarity=0.057  Sum_probs=73.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--E-----EEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--H-----VVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~-----Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      .+++||||+|+||.+++..|+..|.  +     ++++|.++  +.++....++..... ..+.    ++....+..+.  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~----~~~~~~~~~~~--   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLK----DVIATDKEEIA--   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEE----EEEEESCHHHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccC----CEEEcCCcHHH--
Confidence            5799999999999999999998875  5     99999874  355555666655311 1111    11111111111  


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-eEEEEcCCcc
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEGH  175 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g-~iv~vsS~~~  175 (282)
                           +.+.|++|++||....+. .+..   +.++.|...    ++.+.+.+.+..    .++ .++++|.-..
T Consensus        77 -----~~daDvVvitAg~prkpG-~tR~---dll~~N~~i----~~~i~~~i~~~~----~~~~~vivvsNPvd  133 (333)
T 5mdh_A           77 -----FKDLDVAILVGSMPRRDG-MERK---DLLKANVKI----FKCQGAALDKYA----KKSVKVIVVGNPAN  133 (333)
T ss_dssp             -----TTTCSEEEECCSCCCCTT-CCTT---TTHHHHHHH----HHHHHHHHHHHS----CTTCEEEECSSSHH
T ss_pred             -----hCCCCEEEEeCCCCCCCC-CCHH---HHHHHHHHH----HHHHHHHHHHhC----CCCeEEEEcCCchH
Confidence                 237799999999764432 2222   336666665    555555555541    345 5888887443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.23  E-value=0.006  Score=53.28  Aligned_cols=119  Identities=21%  Similarity=0.166  Sum_probs=73.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++++++++.++....++....    ...++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            45578999998 9999999999999998 99999999887765555554431    1122221 122   11        


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                         .+.+.|++|.++|....+.. +..   +.+..|..    +++...+.+.+..    +.+.++++|.-..
T Consensus        72 ---a~~~aDiVIiaag~p~k~G~-~R~---dl~~~N~~----i~~~i~~~i~~~~----p~a~iivvtNPvd  128 (324)
T 3gvi_A           72 ---AIEGADVVIVTAGVPRKPGM-SRD---DLLGINLK----VMEQVGAGIKKYA----PEAFVICITNPLD  128 (324)
T ss_dssp             ---GGTTCSEEEECCSCCCC------C---HHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHH
T ss_pred             ---HHCCCCEEEEccCcCCCCCC-CHH---HHHHhhHH----HHHHHHHHHHHHC----CCeEEEecCCCcH
Confidence               12367999999997544321 222   23444443    4555666666542    4578888887443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.20  E-value=0.00035  Score=59.76  Aligned_cols=43  Identities=14%  Similarity=0.064  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKD   70 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~   70 (282)
                      .++++++++|+|+ ||.|++++..|++.|+ +|.+++|+.++.++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            4678999999997 7999999999999999 89999999876444

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.19  E-value=0.00072  Score=59.47  Aligned_cols=77  Identities=17%  Similarity=0.203  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|..+++.+...|+ +|+.++++.++.+... +    + .   . ...|..+. ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~----l-a---~-~v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-P----Y-A---D-RLVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-T----T-C---S-EEECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H----h-H---H-hccCcCcc-CHHHHHHHhc--C
Confidence            7899999999 9999999999999999 8999999876543221 1    1 1   1 12455543 3444444433  3


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|++|.++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0033  Score=56.05  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC--CHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs--~~~~i~~~~~~i~~  106 (282)
                      .|++++|+| +|++|...++.+...| ++|+.++++.++.+... ++     +.. ..  .|..  +.+++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcchHHHHHHHHhC
Confidence            478999999 8999999999998999 59999999877654432 22     322 12  2443  23444433333321


Q ss_pred             cCCCccEEEEcCCC
Q 023438          107 QHHQLNILINNAGI  120 (282)
Q Consensus       107 ~~g~id~vi~~ag~  120 (282)
                      . ..+|++|.++|.
T Consensus       265 g-~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 G-RGADFILEATGD  277 (380)
T ss_dssp             T-SCEEEEEECSSC
T ss_pred             C-CCCcEEEECCCC
Confidence            1 259999999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.19  E-value=0.0014  Score=57.39  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+|+ |++|...++.+...|++|+.++++.++.+.. +++     +...   ..|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL-----GAEV---AVNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEeCCCcCHHHHHHH----hCC
Confidence            5789999997 8999999999999999999999988775543 222     3222   135555433333333    235


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            7999999987

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.18  E-value=0.0033  Score=55.51  Aligned_cols=78  Identities=24%  Similarity=0.196  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC--CHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs--~~~~i~~~~~~i~~  106 (282)
                      .|.+++|+|+ |++|...++.+...|+ +|++++++.++.+... ++     +.. ..  .|..  +.+++.+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccchHHHHHHHHhC
Confidence            5789999996 9999999998888999 8999999877654432 22     332 11  3444  22333333333222


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                        +.+|++|.++|
T Consensus       241 --~g~D~vid~~g  251 (356)
T 1pl8_A          241 --CKPEVTIECTG  251 (356)
T ss_dssp             --SCCSEEEECSC
T ss_pred             --CCCCEEEECCC
Confidence              47999999998

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.0022  Score=56.74  Aligned_cols=78  Identities=15%  Similarity=0.140  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+... |++|+.++++.++.+... ++     +...   ..|.++.  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch--HHHHHHHHhC-C
Confidence            5789999999 89999999988888 999999999877655432 22     3221   1355553  3333333322 1


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            269999999983

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.17  E-value=0.014  Score=50.73  Aligned_cols=120  Identities=19%  Similarity=0.150  Sum_probs=74.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC--hhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~--~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      |.++.+++.|+|+ |.+|.++|..|+..|. +|++++++  +...+....++....    ...++... .|   .     
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~-----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y-----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H-----
Confidence            3456688999997 9999999999999999 99999999  455544444443321    01122211 12   1     


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                            +.+.+.|++|.++|....+. .+.   .+.++.|..-    .+...+.+.+.    ++.+.++++|.-.
T Consensus        74 ------~a~~~aDvVIiaag~p~kpg-~~R---~dl~~~N~~i----~~~i~~~i~~~----~p~a~vlvvsNPv  130 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIARKPG-MSR---DDLVATNSKI----MKSITRDIAKH----SPNAIIVVLTNPV  130 (315)
T ss_dssp             ------GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHHHH----HHHHHHHHHHH----CTTCEEEECCSSH
T ss_pred             ------HHhCCCCEEEEeCCCCCCCC-CCH---HHHHHHHHHH----HHHHHHHHHHh----CCCeEEEECCChH
Confidence                  12347899999999754432 222   2335555544    55555555554    2456888888743

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.15  E-value=0.0013  Score=58.45  Aligned_cols=77  Identities=12%  Similarity=0.188  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+||+|++|...++.+.. .|++|+.++++.++.+... ++     +...   ..|.++  ++.+.+.++  ..
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l-----Gad~---vi~~~~--~~~~~v~~~--~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL-----GAHH---VIDHSK--PLAAEVAAL--GL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT-----TCSE---EECTTS--CHHHHHHTT--CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCC--CHHHHHHHh--cC
Confidence            578999999999999998877766 5889999999877654432 22     3221   124443  233323322  33


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      +.+|+++.++|
T Consensus       238 ~g~Dvvid~~g  248 (363)
T 4dvj_A          238 GAPAFVFSTTH  248 (363)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCC
Confidence            47999999998

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0014  Score=58.22  Aligned_cols=79  Identities=13%  Similarity=0.108  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|++++|+|+ |++|...++.+...|+ +|+.++++.++++... ++     +...   ..|.++ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATD---FVNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCE---EECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCce---EEeccccchhHHHHHHHHhC-
Confidence            5789999995 9999999999999999 7999999887765432 22     3221   135443 1234444444433 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|++|.++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.14  E-value=0.0014  Score=58.34  Aligned_cols=81  Identities=23%  Similarity=0.352  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+...|+ +|++++++.++.+. .+++     +...   ..|.++.+..+.+.+......
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l-----Ga~~---vi~~~~~~~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV-----GATA---TVDPSAGDVVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH-----TCSE---EECTTSSCHHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc-----CCCE---EECCCCcCHHHHHHhhhhccC
Confidence            5789999998 9999999999999999 88888888776543 3333     3221   235555432222222111123


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0021  Score=57.22  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+ |++|..+++.+...|++|++++++.++.+... ++     +...   ..|..+.+.++    ++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~----~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GADE---VVNSRNADEMA----AHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE---EEETTCHHHHH----TTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcE---EeccccHHHHH----Hhh---c
Confidence            5789999998 89999999988889999999999888765543 33     3221   13555544322    221   4


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.13  E-value=0.02  Score=49.97  Aligned_cols=117  Identities=15%  Similarity=0.064  Sum_probs=74.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhC--C-CCceeEEEccCCCHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--P-SAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~--~-~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++.|+|+ |.+|.++|..|+..|.  +|++++.+++.++....++....  . ..++ ....|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCHHH-----------
Confidence            3478999999 9999999999999997  89999999888777666665532  1 1112 11223321           


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                         +.+.|++|.+||....+.+ +.++   .+..|..    +.+...+.+.+.    ++.+.++++|.-.
T Consensus        87 ---~~daDiVIitaG~p~kpG~-tR~d---ll~~N~~----I~k~i~~~I~k~----~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEGE-SRLN---LVQRNVN----IFKFIIPNIVKH----SPDCLKELHPELG  141 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSSC-CTTG---GGHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSH
T ss_pred             ---hCCCCEEEEeCCCCCCCCC-CHHH---HHHhhHH----HHHHHHHHHHhh----CCCceEEeCCCcc
Confidence               3478999999997654322 2222   2333333    345555555554    2456777777643

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.11  E-value=0.00099  Score=59.00  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+ |++|..+++.+...|++|+.++++.++.+... ++     +... .  .|..+..++   .+.+.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--~~~~~~~~~---~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-Y--IATLEEGDW---GEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-E--EEGGGTSCH---HHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-E--EcCcCchHH---HHHhh---c
Confidence            5789999999 99999999998899999999999887765443 33     3221 1  244332011   22222   4


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.11  E-value=0.0024  Score=56.74  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=52.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      -.|.+++|+||+|++|...++.+...|++|+.+. +.++.+ ..+++     +...   ..|..+.+ +.+.+.++.  .
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-----Ga~~---vi~~~~~~-~~~~v~~~t--~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-----GAEE---VFDYRAPN-LAQTIRTYT--K  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-----TCSE---EEETTSTT-HHHHHHHHT--T
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-----CCcE---EEECCCch-HHHHHHHHc--c
Confidence            4689999999999999999999999999998886 454433 33332     3221   13555543 333333322  2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +++|+++.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            459999999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.09  E-value=0.0012  Score=58.31  Aligned_cols=75  Identities=17%  Similarity=0.219  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+ |+||...++.+...|++|++++++.++.+...++    + +... .  .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----l-Ga~~-v--i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----L-GADD-Y--VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----S-CCSC-E--EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----c-CCce-e--eccccHHHHH-------HhcC
Confidence            6899999995 9999999999889999999999987765443322    2 3221 1  2445543222       2224


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.08  E-value=0.0012  Score=57.53  Aligned_cols=73  Identities=11%  Similarity=0.235  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+||+|++|...++.+...|++|+.++++. + .+..+++     +...   ..|..+.+.+.+.       ..
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l-----Ga~~---~i~~~~~~~~~~~-------~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL-----GAEQ---CINYHEEDFLLAI-------ST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH-----TCSE---EEETTTSCHHHHC-------CS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc-----CCCE---EEeCCCcchhhhh-------cc
Confidence            578999999999999999999999999999887543 3 2333333     3321   2355543322221       24


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus       215 g~D~v~d~~g  224 (321)
T 3tqh_A          215 PVDAVIDLVG  224 (321)
T ss_dssp             CEEEEEESSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.07  E-value=0.002  Score=57.19  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.++||+|+ |++|...++.+...|+ +|+.++++.++.+... ++     +... .  .|.++ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE-C--INPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE-E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce-E--eccccccccHHHHHHHHhC-
Confidence            5789999996 9999999999888999 7999999887765442 33     3221 1  34443 1234444444332 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.07  E-value=0.0027  Score=57.10  Aligned_cols=79  Identities=15%  Similarity=0.283  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.. +++     +...   ..|..+.+..+.+ .++. ..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~i-~~~t-~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKENFVEAV-LDYT-NG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTSCHHHHH-HHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCCCHHHHH-HHHh-CC
Confidence            5789999998 9999999999989999 899999887765443 333     3221   1355543323332 2221 11


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999983

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.07  E-value=0.0016  Score=58.17  Aligned_cols=80  Identities=19%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCCEEEEec-CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG-~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.| |+|++|...++.+...|++|+.++++.++.+... ++     +... .  .|..+.+..+.+.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-~--~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ-----GAVH-V--CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT-----TCSC-E--EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC-----CCcE-E--EeCCChHHHHHHHHHhcC--
Confidence            578999997 9999999999999999999999999877655432 22     3221 1  344443333333332221  


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|+++.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999984

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.06  E-value=0.012  Score=51.39  Aligned_cols=120  Identities=14%  Similarity=0.171  Sum_probs=74.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++++++++.++....++.....  .........  .+.+          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----------
Confidence            44578899995 9999999999999988 999999998877665555554210  111111111  1111          


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                       .+.+.|++|.++|....+. .+..   +.+..|..    +.+...+.+.+..    +.+.++++|.-.
T Consensus        70 -a~~~aDvVIi~ag~p~k~G-~~R~---dl~~~N~~----i~~~i~~~i~~~~----p~a~vivvtNPv  125 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKPG-MSRD---DLLGINIK----VMQTVGEGIKHNC----PNAFVICITNPL  125 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSH
T ss_pred             -HHCCCCEEEEcCCcCCCCC-CCHH---HHHHHhHH----HHHHHHHHHHHHC----CCcEEEEecCch
Confidence             1236799999999754432 2222   23444444    4555555655542    456788887643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.02  E-value=0.0011  Score=58.32  Aligned_cols=69  Identities=17%  Similarity=0.252  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+ |+||...++.+...|++|++++++.++.+... ++     +....+     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM-----GVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT-----TCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc-----CCCeec-----CCHHHHhc----------
Confidence            5889999997 99999999999999999999999988765432 22     333222     33332211          


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|+++.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.02  E-value=0.00083  Score=55.69  Aligned_cols=72  Identities=14%  Similarity=0.107  Sum_probs=54.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++.+..+...     .    .+.++.+|.++++.++++      ...+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc------Ccch
Confidence            357889997 8999999999999999 999999877644332     1    367889999998765543      1236


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            788887765

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.02  E-value=0.002  Score=56.66  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |++|...++.+...  |++|+.++++.++.+... ++     +... .  .|..+.   ....+++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY-V--SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE-E--ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE-E--eccccc---hHHHHHhhc-
Confidence            7899999999 89999999988888  999999999877655432 33     3221 1  233220   122333332 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      ...+|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2269999999983

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.98  E-value=0.0013  Score=58.72  Aligned_cols=79  Identities=9%  Similarity=0.085  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |+||...++.+...|+ +|+.++++.++++.. +++     +...   ..|..+ .+++.+.+.++.  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~i~~~~--  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNE---FVNPKDHDKPIQEVIVDLT--  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCE---EECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcE---EEccccCchhHHHHHHHhc--
Confidence            5789999998 9999999999999999 799999888775532 222     3221   134442 233444444432  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|.++|.
T Consensus       261 ~gg~D~vid~~g~  273 (378)
T 3uko_A          261 DGGVDYSFECIGN  273 (378)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999983

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.98  E-value=0.0019  Score=57.02  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChhHHHH-HHHH-HHcCCE-EEEEEcChh---hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTET-ARVL-ALRGVH-VVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~ai-a~~l-~~~G~~-Vii~~r~~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ++.+++|+|+ |++|... ++.+ ...|++ |+.++++.+   +.+.. +++     +.  ..+  |..+.+ +.+ +.+
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----Ga--~~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----DA--TYV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----TC--EEE--ETTTSC-GGG-HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----CC--ccc--CCCccC-HHH-HHH
Confidence            3499999999 9999999 8777 678997 999999876   54433 222     32  333  555432 333 444


Q ss_pred             HHhcCCCccEEEEcCC
Q 023438          104 YNIQHHQLNILINNAG  119 (282)
Q Consensus       104 i~~~~g~id~vi~~ag  119 (282)
                      +   .+.+|++|.++|
T Consensus       239 ~---~gg~Dvvid~~g  251 (357)
T 2b5w_A          239 V---YEQMDFIYEATG  251 (357)
T ss_dssp             H---SCCEEEEEECSC
T ss_pred             h---CCCCCEEEECCC
Confidence            4   237999999998

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.97  E-value=0.0028  Score=56.42  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |+||...++.+...|+ +|+.++++.++.+.. +++     +...   ..|.++ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GATD---CLNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSE---EECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCcE---EEccccccchHHHHHHHHhC-
Confidence            5789999996 9999999998889999 899999988775543 222     3221   134443 1234444444332 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.97  E-value=0.0026  Score=56.59  Aligned_cols=79  Identities=13%  Similarity=0.124  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|++++|+|+ |++|..+++.+...|+ +|+.++++.++.+.. +++     +...   ..|.++ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV-----GATE---CVNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSE---EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCce---EecccccchhHHHHHHHHhC-
Confidence            5789999995 9999999999999999 799999988775543 222     3221   135443 1234444444332 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999984

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.97  E-value=0.00077  Score=57.76  Aligned_cols=46  Identities=11%  Similarity=0.135  Sum_probs=39.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK   72 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~   72 (282)
                      ..++++++++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            45678999999998 7999999999999998 8999999987755543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.93  E-value=0.0069  Score=53.07  Aligned_cols=78  Identities=18%  Similarity=0.116  Sum_probs=52.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC---C-CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI---P-SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~---~-~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..++.|+|+ |.+|.++|..|+..|+ +|++++++++.++.....+....   . ..++...    +|   +++.++   
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~~ea~~---   77 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YS---YEAALT---   77 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CS---HHHHHT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CC---HHHHhC---
Confidence            357999998 9999999999999998 99999999887776444443321   1 1122111    22   222222   


Q ss_pred             hcCCCccEEEEcCCCCCC
Q 023438          106 IQHHQLNILINNAGIMGT  123 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~  123 (282)
                          +.|++|.++|....
T Consensus        78 ----~aDiVi~a~g~p~~   91 (331)
T 1pzg_A           78 ----GADCVIVTAGLTKV   91 (331)
T ss_dssp             ----TCSEEEECCSCSSC
T ss_pred             ----CCCEEEEccCCCCC
Confidence                67999999997543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.90  E-value=0.016  Score=49.42  Aligned_cols=42  Identities=21%  Similarity=0.173  Sum_probs=36.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~   74 (282)
                      +++.|.|+ |.+|.++|..|++.|++|++.+++.+.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            67888876 8899999999999999999999999887766655

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.82  E-value=0.0034  Score=55.72  Aligned_cols=79  Identities=15%  Similarity=0.115  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |+||...++.+...|+ +|+.++++.++.+... ++     +... .  .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-C--LNPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhC-
Confidence            5789999995 9999999998888999 7999998887755432 22     3221 1  34432 1234444444322 


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                       +.+|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.81  E-value=0.0031  Score=56.77  Aligned_cols=43  Identities=16%  Similarity=0.022  Sum_probs=38.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++...++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 8999999999999999999999998776554

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.80  E-value=0.0026  Score=57.78  Aligned_cols=64  Identities=22%  Similarity=0.274  Sum_probs=50.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46789999998 8999999999999998 788987442                   35566777777777777788877


Q ss_pred             ccCCC
Q 023438           89 LDLSS   93 (282)
Q Consensus        89 ~Dvs~   93 (282)
                      .++.+
T Consensus       117 ~~i~~  121 (434)
T 1tt5_B          117 NKIQD  121 (434)
T ss_dssp             SCGGG
T ss_pred             cccch
Confidence            76654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.79  E-value=0.0031  Score=54.78  Aligned_cols=73  Identities=21%  Similarity=0.268  Sum_probs=50.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |+ ++|+|++|++|.+.++.+...|++|+.++++.++.+... ++     +....+   |..+.+.    ++++  ..+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~vi---~~~~~~~----~~~~--~~~~  211 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL-----GANRIL---SRDEFAE----SRPL--EKQL  211 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH-----TCSEEE---EGGGSSC----CCSS--CCCC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEE---ecCCHHH----HHhh--cCCC
Confidence            45 999999999999999999999999999999887765543 33     333222   3222221    1111  2247


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      +|+++.++|
T Consensus       212 ~d~v~d~~g  220 (324)
T 3nx4_A          212 WAGAIDTVG  220 (324)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            899999987

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.78  E-value=0.0026  Score=58.44  Aligned_cols=74  Identities=12%  Similarity=0.183  Sum_probs=57.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ..++|.|+ |-+|..+|+.|.++|++|++++++++..+.+.+++       .+..+.+|.++++.++++-      -.+.
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Ag------i~~a   69 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAG------AQDA   69 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHT------TTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcC------CCcC
Confidence            46888888 89999999999999999999999988765544332       4778899999988766541      1267


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      |++|...+
T Consensus        70 d~~ia~t~   77 (461)
T 4g65_A           70 DMLVAVTN   77 (461)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEcC
Confidence            88887665

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.76  E-value=0.00089  Score=56.49  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=35.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKD   70 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~   70 (282)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4578 9999997 8999999999999998 89999999776444

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.76  E-value=0.0045  Score=55.96  Aligned_cols=60  Identities=20%  Similarity=0.277  Sum_probs=44.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      +..++|.|. |-+|..+++.|.+.|+.|++++++.+..+...+    .    .+.++.+|.++++.+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHh
Confidence            356899997 889999999999999999999999887555432    1    24456667777654433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.76  E-value=0.0067  Score=53.79  Aligned_cols=78  Identities=10%  Similarity=0.079  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++++|+|+ |++|...++.+...|+ +|+.++++.++.+.. +++     +... .  .|..+.+ +.+.+.++.  .
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-v--i~~~~~~-~~~~~~~~~--~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATH-V--INSKTQD-PVAAIKEIT--D  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSE-E--EETTTSC-HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCE-E--ecCCccC-HHHHHHHhc--C
Confidence            5789999995 9999999998888999 699999987765543 333     3221 1  2444432 222222221  2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999983

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.75  E-value=0.0023  Score=56.56  Aligned_cols=37  Identities=27%  Similarity=0.426  Sum_probs=32.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .|.+++|+||+|++|...++.+...|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5789999999999999999988889999888776543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.75  E-value=0.024  Score=48.74  Aligned_cols=40  Identities=25%  Similarity=0.183  Sum_probs=35.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      +++.|.|+ |.+|.++|..|++.|++|++++|+++.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            67899998 99999999999999999999999988776543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.73  E-value=0.0057  Score=52.54  Aligned_cols=42  Identities=26%  Similarity=0.325  Sum_probs=37.5

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~   69 (282)
                      .+++|++++|.|+ |+||+++++.|...|++|++.+|+.+..+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            5688999999995 89999999999999999999999976543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.73  E-value=0.033  Score=47.88  Aligned_cols=116  Identities=11%  Similarity=0.058  Sum_probs=71.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++.|+|+ |.+|.+++..|+..|.  +|.+++++++.++....++....+  .........  +|.+           ..
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            5789999 9999999999999998  899999998876644334433210  111111111  1111           12


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      .+.|++|.++|....+. .+..   +.+..|.    -+++...+.+.+.    ++.+.++++|.-.
T Consensus        68 ~~aDiVViaag~~~kpG-~~R~---dl~~~N~----~i~~~i~~~i~~~----~p~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARKPG-MTRL---DLAHKNA----GIIKDIAKKIVEN----APESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCSS-CCHH---HHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCCC-CcHH---HHHHHHH----HHHHHHHHHHHhh----CCCeEEEEeCCcc
Confidence            36799999999754432 2222   2344443    3456666666654    2457788777643

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0064  Score=54.45  Aligned_cols=79  Identities=20%  Similarity=0.226  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+...|+ .|++++++.++++.. +++     +.  ..  .|.++.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga--~~--i~~~~~~~~~~~v~~~t~-g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ-----GF--EI--ADLSLDTPLHEQIAALLG-E  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TC--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc-----CC--cE--EccCCcchHHHHHHHHhC-C
Confidence            5789999995 9999999998888999 688999987765443 222     43  22  355543333333333221 1


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (398)
T 1kol_A          253 PEVDCAVDAVGF  264 (398)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCCCEEEECCCC
Confidence            369999999985

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.71  E-value=0.0025  Score=56.23  Aligned_cols=80  Identities=20%  Similarity=0.237  Sum_probs=58.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC-------------------hhhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~-------------------~~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            56789999997 8999999999999998 78888643                   235667777788877777777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNA  118 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~a  118 (282)
                      .++++  ....++       .++|+||.+.
T Consensus       113 ~~~~~--~~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          113 EDIEK--KPESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             SCGGG--CCHHHH-------TTCSEEEEES
T ss_pred             cccCc--chHHHh-------cCCCEEEEcC
Confidence            66643  111222       3678888764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.71  E-value=0.0026  Score=54.01  Aligned_cols=43  Identities=21%  Similarity=0.179  Sum_probs=39.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      +++++|+|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 99999999999999999999999999877766 44

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.71  E-value=0.037  Score=48.62  Aligned_cols=122  Identities=15%  Similarity=0.108  Sum_probs=72.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcChh--hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      ++.-+|.|+||+|+||.+++..|++...       ++.+++.++.  .++....++...........+..  ++.   ..
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---RV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---HH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---HH
Confidence            4456899999999999999999987643       7889987653  33444445554221111112211  121   11


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                             .+.+.|++|.+||..+.+- .+-+++   ++.|..    +++...+.+.+...   +...|+.+|.-
T Consensus        97 -------a~~~advVvi~aG~prkpG-mtR~DL---l~~Na~----I~~~~~~~i~~~a~---~~~~vlvvsNP  152 (345)
T 4h7p_A           97 -------AFDGVAIAIMCGAFPRKAG-MERKDL---LEMNAR----IFKEQGEAIAAVAA---SDCRVVVVGNP  152 (345)
T ss_dssp             -------HTTTCSEEEECCCCCCCTT-CCHHHH---HHHHHH----HHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             -------HhCCCCEEEECCCCCCCCC-CCHHHH---HHHhHH----HHHHHHHHHHhhcc---CceEEEEeCCC
Confidence                   1347899999999865542 244433   555544    45666666665411   23456666664

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.70  E-value=0.006  Score=54.67  Aligned_cols=79  Identities=19%  Similarity=0.258  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+...|+ +|+.++++.++++.. ++    + +.  ..  .|..+.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~----l-Ga--~~--i~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SD----A-GF--ET--IDLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HT----T-TC--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HH----c-CC--cE--EcCCCcchHHHHHHHHhC-C
Confidence            5789999996 9999999998888999 899999987765432 22    2 33  22  355543321222222221 1


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.68  E-value=0.0045  Score=54.53  Aligned_cols=79  Identities=11%  Similarity=0.021  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |+||...++.+...|+ +|+.++++.++++. .+++     +...   ..|.++.+..+.+.+..  ..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~l-----Ga~~---vi~~~~~~~~~~v~~~t--~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEY-----GATD---IINYKNGDIVEQILKAT--DG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHH-----TCCE---EECGGGSCHHHHHHHHT--TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHh-----CCce---EEcCCCcCHHHHHHHHc--CC
Confidence            5789999985 9999999999889999 79999988776543 3333     3221   13444433222222221  11


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|+++.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.67  E-value=0.0033  Score=59.68  Aligned_cols=83  Identities=25%  Similarity=0.336  Sum_probs=60.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            45689999998 9999999999999998 799998653                   23455666777777778888888


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcCC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      .+++..+....++       .++|+||.+..
T Consensus        94 ~~i~~~~~~~~~~-------~~~DlVvda~D  117 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------RQFILVMNALD  117 (640)
T ss_dssp             SCTTSTTSCHHHH-------TTCSEEEECCS
T ss_pred             cccchhhhhHhhh-------cCCCEEEECCC
Confidence            8886532111222       36789888754

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.63  E-value=0.0092  Score=50.91  Aligned_cols=86  Identities=13%  Similarity=0.089  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcChhhHHHHHHHH--------HHhCCCCceeEEEccCCCHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETI--------VKEIPSAKVDAMELDLSSLASVR   98 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~~~~~~~~~~l--------~~~~~~~~v~~~~~Dvs~~~~i~   98 (282)
                      +.+++.|+|+ |-+|.++++.|++.|+   +|++.+|+.+..+...+++        .+.....++.++.+   .++.+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~   77 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIK   77 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHH
Confidence            3467888888 9999999999999998   8999999988876655431        11111223433333   356677


Q ss_pred             HHHHHHHhc-CCCccEEEEcCC
Q 023438           99 NFASEYNIQ-HHQLNILINNAG  119 (282)
Q Consensus        99 ~~~~~i~~~-~g~id~vi~~ag  119 (282)
                      .+++++... ..+=.++|++++
T Consensus        78 ~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           78 MVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHhhccCCCeEEEEecC
Confidence            777777654 322237777655

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.56  E-value=0.083  Score=45.77  Aligned_cols=115  Identities=12%  Similarity=0.141  Sum_probs=71.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC--CceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++.|+|+ |.+|.+++..|+..|.  +|++++++++.++.....+....+-  ..+.... |  +.+           .
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~-----------a   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYD-----------D   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGG-----------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHH-----------H
Confidence            68999999 9999999999998885  8999999987666555555553321  1222222 1  211           1


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +.+.|+||.++|....... +..+   .+..|    .-+.+...+.+.+..    +.+.++++|.-
T Consensus        72 l~~aDvViia~~~~~~~g~-~r~d---l~~~n----~~i~~~i~~~i~~~~----p~a~~iv~tNP  125 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE-TRLD---LVDKN----IAIFRSIVESVMASG----FQGLFLVATNP  125 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT-CSGG---GHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSS
T ss_pred             hCCCCEEEEcCCCCCCCCC-CHHH---HHHcC----hHHHHHHHHHHHHHC----CCCEEEEeCCc
Confidence            3378999999997654322 2222   23333    234555666666542    35567776653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.54  E-value=0.0093  Score=52.27  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|+ |++|...++.+... |++|+.++++.++.+.. +++     +... .  .|..+ +..+.+.+...  .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~-~~~~~v~~~t~--g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV-----GADA-A--VKSGA-GAADAIRELTG--G  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT-----TCSE-E--EECST-THHHHHHHHHG--G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc-----CCCE-E--EcCCC-cHHHHHHHHhC--C
Confidence            5789999998 99999998887777 67999999988775543 222     3322 1  23332 22233222221  1


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|+++.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            279999999983

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.53  E-value=0.071  Score=46.15  Aligned_cols=118  Identities=16%  Similarity=0.141  Sum_probs=69.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHc-C--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALR-G--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~-G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.|+||+|.+|.+++..|+.. +  .++++++.++ .......++.......++..+..  ++.   ..   .    +.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~--~~~---~~---~----~~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSG--EDA---TP---A----LE   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECS--SCC---HH---H----HT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecC--CCc---HH---H----hC
Confidence            5889999999999999999876 5  3799999987 44444445543211111221111  111   11   1    12


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +.|++|.+||....+- .+.   .+.++.|..-    ++...+.+.+.    ++.+.++++|.-..
T Consensus        69 ~aDivii~ag~~rkpG-~~R---~dll~~N~~I----~~~i~~~i~~~----~p~a~vlvvtNPvd  122 (312)
T 3hhp_A           69 GADVVLISAGVARKPG-MDR---SDLFNVNAGI----VKNLVQQVAKT----CPKACIGIITNPVN  122 (312)
T ss_dssp             TCSEEEECCSCSCCTT-CCH---HHHHHHHHHH----HHHHHHHHHHH----CTTSEEEECSSCHH
T ss_pred             CCCEEEEeCCCCCCCC-CCH---HHHHHHHHHH----HHHHHHHHHHH----CCCcEEEEecCcch
Confidence            7899999999764432 222   3345555544    44455555544    14567888877443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.51  E-value=0.0049  Score=53.34  Aligned_cols=68  Identities=6%  Similarity=0.026  Sum_probs=46.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|+|+ |++|...++.+...|++|+.++ +.++.+.. +++     +... .+  |  |.+.       +   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~-v~--~--d~~~-------v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR-----GVRH-LY--R--EPSQ-------V---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH-----TEEE-EE--S--SGGG-------C---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc-----CCCE-EE--c--CHHH-------h---CC
Confidence            5799999999 9999999999989999999999 66665443 333     3222 22  3  2221       1   45


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|+++.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            79999999984

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.49  E-value=0.0056  Score=54.32  Aligned_cols=47  Identities=19%  Similarity=0.195  Sum_probs=40.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      +++||+++|+|. |.+|..+|+.|.+.|++|++.+++.+.+++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 88999999999999999999999887766655543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.48  E-value=0.015  Score=51.84  Aligned_cols=44  Identities=14%  Similarity=0.051  Sum_probs=38.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      .+.+.+++|+|+ |.+|..+++.+...|++|++++|+...++...
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            357899999999 89999999999999999999999988766553

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.46  E-value=0.086  Score=45.22  Aligned_cols=115  Identities=12%  Similarity=0.093  Sum_probs=73.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEE-ccCCCHHHHHHHHHHHHhc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAME-LDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~-~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+.|+|+ |+||.++|..|+..|.  +++++|.+++..+.....+....+  ........ .|.   ++           
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~---~~-----------   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL-----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG---GG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH---HH-----------
Confidence            4778895 9999999999998885  799999998777766666655211  11122222 232   21           


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      ..+-|++|..||..+.+- .+-++   .++.|..    +++.+.+.+.+.    ++.+.++.+|.-.
T Consensus        67 ~~~aDvVvitAG~prkpG-mtR~d---Ll~~Na~----I~~~i~~~i~~~----~p~aivlvvsNPv  121 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARKPG-MTRLD---LAHKNAG----IIKDIAKKIVEN----APESKILVVTNPM  121 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-SCHHH---HHHHHHH----HHHHHHHHHHTT----STTCEEEECSSSH
T ss_pred             hCCCCEEEEecCCCCCCC-CchHH---HHHHHHH----HHHHHHHHHHhc----CCceEEEEecCcc
Confidence            236799999999865543 24333   3555544    566666666664    2456777777743

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.45  E-value=0.087  Score=45.54  Aligned_cols=117  Identities=18%  Similarity=0.186  Sum_probs=73.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++.|+|+ |.+|.+++..|+..+  .+|+++|.+.++++....++....+ ...+.... |  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 999999999999987  4899999998887776666655321 01222222 2  2221           2


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .+.|++|..+|...... .+-+   +.+..|..    +++...+.+.+.    ++.+.++++|.-..
T Consensus        66 ~~aD~Vii~ag~~~~~g-~~r~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG-ETRL---QLLDRNAQ----VFAQVVPRVLEA----APEAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-cCHH---HHHHhhHH----HHHHHHHHHHHH----CCCcEEEEecCchH
Confidence            37899999999754332 1222   22333433    455555665554    24678888876443

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.41  E-value=0.0056  Score=56.26  Aligned_cols=139  Identities=9%  Similarity=0.089  Sum_probs=72.9

Q ss_pred             CCCCCcccccCCCCCCCCEEEEecCCChhHHHHHHHHHHc-----CCEEEEEEcChhhHHHHHHHHHHhC-----CCCce
Q 023438           15 SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALR-----GVHVVMGVRDIAAGKDVKETIVKEI-----PSAKV   84 (282)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~-----G~~Vii~~r~~~~~~~~~~~l~~~~-----~~~~v   84 (282)
                      ..-+...+..++|.|+.+++.|.||+++.|.+++..|++.     +.+|++.+++++.++... .+.+.+     ...++
T Consensus        12 ~~~~~~~~~~~~m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~~~~~~~~I   90 (472)
T 1u8x_X           12 DLGTENLYFQSNMKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIREKAPDIEF   90 (472)
T ss_dssp             --------------CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHHHHCTTSEE
T ss_pred             ccCccceeeccccccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhccCCCCCEE
Confidence            3344455556666566678999999888899999889987     668999999998766643 222221     11222


Q ss_pred             eEEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHH----------------HHHHHHHHH
Q 023438           85 DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN----------------HLGHFLLTN  148 (282)
Q Consensus        85 ~~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n----------------~~~~~~~~~  148 (282)
                      ...    +|   .++.+       .+.|+||..+|......    ...++.+..+                ..-+.-+++
T Consensus        91 ~~t----~D---~~eal-------~~AD~VViaag~~~~~g----~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~  152 (472)
T 1u8x_X           91 AAT----TD---PEEAF-------TDVDFVMAHIRVGKYAM----RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVL  152 (472)
T ss_dssp             EEE----SC---HHHHH-------SSCSEEEECCCTTHHHH----HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHH
T ss_pred             EEE----CC---HHHHH-------cCCCEEEEcCCCccccc----cchhhhhhhhcCcccccccCchhHHHHhhhHHHHH
Confidence            221    22   22222       26799999998642210    0011111111                223334566


Q ss_pred             HHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438          149 LLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus       149 ~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      .+.+.+.+.    ++.+-++++|.-...
T Consensus       153 ~i~~~i~~~----~P~A~ii~~TNPvdi  176 (472)
T 1u8x_X          153 EILDYMEKY----SPDAWMLNYSNPAAI  176 (472)
T ss_dssp             HHHHHHHHH----CTTCEEEECCSCHHH
T ss_pred             HHHHHHHHH----CCCeEEEEeCCcHHH
Confidence            666666665    246788888875543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.40  E-value=0.0051  Score=55.03  Aligned_cols=43  Identities=16%  Similarity=0.085  Sum_probs=37.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .+.+++++|+|+ |++|+++++.+...|++|++++++..+.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            467899999996 8999999999999999999999988775553

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.40  E-value=0.054  Score=46.97  Aligned_cols=117  Identities=19%  Similarity=0.193  Sum_probs=70.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++.|+|+ |.+|.+++..|+..|.  +|++++++++.++....++.....  ...+.....|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5789997 9999999999999987  899999998877655555543210  1112222111  11           123


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .+.|++|.++|....+. .+..   +.++.|..    +++...+.+.+.    ++.+.++++|.-..
T Consensus        68 ~~aDvVii~ag~~~kpG-~~R~---dl~~~N~~----i~~~i~~~i~~~----~p~a~vivvtNPvd  122 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-MSRD---DLLAKNTE----IVGGVTEQFVEG----SPDSTIIVVANPLD  122 (314)
T ss_dssp             TTCSEEEECCCC--------CH---HHHHHHHH----HHHHHHHHHHTT----CTTCEEEECCSSHH
T ss_pred             CCCCEEEECCCCCCCCC-CCHH---HHHHhhHH----HHHHHHHHHHHh----CCCcEEEecCCchh
Confidence            37899999999754332 1222   23444443    456666666654    24678888887443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.38  E-value=0.061  Score=46.73  Aligned_cols=117  Identities=13%  Similarity=0.137  Sum_probs=72.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .++.|+|+ |.+|.+++..|+..+.  +|+++|.+.++++....++....+ ...+.... |  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------Hh
Confidence            58999999 9999999999999886  899999998888776666665421 01222222 2  211           13


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .+.|++|..+|...... .+-+   +.+..|.    -+++...+.+.+.    ++.+.++++|.-..
T Consensus        71 ~~aDvVii~ag~~~~~g-~~R~---dl~~~n~----~i~~~i~~~i~~~----~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-ESRL---DLVNKNL----NILSSIVKPVVDS----GFDGIFLVAANPVD  125 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-CCHH---HHHHHHH----HHHHHHHHHHHHh----CCCeEEEEeCCcHH
Confidence            47899999999754321 1111   1233333    3456666666654    25678888876443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.36  E-value=0.028  Score=48.84  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=66.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ..++.|+|+ |.+|..++..|+..|.  +|+++|.++++++....++.+..+ ...+... .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            357889998 9999999999999987  899999998776655555544311 0111111 1  111           12


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +.+.|++|.++|...... .+.   .+.+..|+.-    ++...+.+.+.    ++.+.++++|.-.
T Consensus        72 ~~~aDvVii~~g~p~k~g-~~r---~dl~~~n~~i----~~~i~~~i~~~----~p~a~viv~tNPv  126 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKPG-ETR---LDLAKKNVMI----AKEVTQNIMKY----YNHGVILVVSNPV  126 (318)
T ss_dssp             GTTCSEEEECCCC-------CH---HHHHHHHHHH----HHHHHHHHHHH----CCSCEEEECSSSH
T ss_pred             hCCCCEEEEcCCCCCCCC-cCH---HHHHHhhHHH----HHHHHHHHHHh----CCCcEEEEecCcH
Confidence            347899999999753321 122   2234445444    44445555543    1456777766543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.35  E-value=0.02  Score=48.70  Aligned_cols=41  Identities=15%  Similarity=0.137  Sum_probs=36.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      +++.|+|++|.+|.++++.|++.|++|++++|+.+..+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            57999999999999999999999999999999987765543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.35  E-value=0.084  Score=45.76  Aligned_cols=119  Identities=13%  Similarity=0.160  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +..++.|+|+ |.+|.+++..|+..|.  +|++++.++++++.....+....+  +..+.... |  +.+          
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~----------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS----------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH----------
Confidence            4468999999 9999999999999884  899999998776655555543221  11222222 2  211          


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                       .+.+.|++|.++|...... .+..   ..+..|..    +++...+.+.+.    ++.+.++++|.-..
T Consensus        71 -a~~~aDvVvi~ag~~~~~g-~~r~---dl~~~n~~----i~~~i~~~i~~~----~p~a~viv~tNPv~  127 (317)
T 3d0o_A           71 -DCHDADLVVICAGAAQKPG-ETRL---DLVSKNLK----IFKSIVGEVMAS----KFDGIFLVATNPVD  127 (317)
T ss_dssp             -GGTTCSEEEECCCCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             -HhCCCCEEEECCCCCCCCC-CcHH---HHHHHHHH----HHHHHHHHHHHh----CCCcEEEEecCcHH
Confidence             1237899999999754322 1222   22333333    455556665554    24677887766443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.35  E-value=0.0024  Score=55.58  Aligned_cols=86  Identities=16%  Similarity=0.086  Sum_probs=56.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCcee-EEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD-AMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~-~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ..+++|++++|.|++.-+|+.+|+.|+..|++|.+++|+........+++     ....+ ...+..++++++.+.+.  
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l-----a~~~~~~t~~~~t~~~~L~e~l~--  244 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL-----KLNKHHVEDLGEYSEDLLKKCSL--  244 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS-----SCCCCEEEEEEECCHHHHHHHHH--
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH-----hhhcccccccccccHhHHHHHhc--
Confidence            35789999999999888999999999999999999988743321111111     00111 11111134466666665  


Q ss_pred             HhcCCCccEEEEcCCCCCC
Q 023438          105 NIQHHQLNILINNAGIMGT  123 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~  123 (282)
                           +.|+||.++|....
T Consensus       245 -----~ADIVIsAtg~p~~  258 (320)
T 1edz_A          245 -----DSDVVITGVPSENY  258 (320)
T ss_dssp             -----HCSEEEECCCCTTC
T ss_pred             -----cCCEEEECCCCCcc
Confidence                 45999999986443

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.30  E-value=0.042  Score=47.35  Aligned_cols=115  Identities=20%  Similarity=0.189  Sum_probs=63.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.|+|+ |.+|.+++..|+..|.  +|++++++++.++....++....+ ...+....   ++.+           ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhC
Confidence            6889998 9999999999999998  999999998766654444433211 00111111   1211           123


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +.|++|.++|...... .+..   +.+..|..-    .+.+.+.+.+.    ++.+.++++|...
T Consensus        67 ~aDvVIi~~~~~~~~g-~~r~---dl~~~n~~i----~~~i~~~i~~~----~p~~~vi~~tNP~  119 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG-ESRL---DLLEKNADI----FRELVPQITRA----APDAVLLVTSNPV  119 (304)
T ss_dssp             TCSEEEECC----------------CHHHHHHH----HHHHHHHHHHH----CSSSEEEECSSSH
T ss_pred             CCCEEEEcCCCCCCCC-CcHH---HHHHhHHHH----HHHHHHHHHHh----CCCeEEEEecCch
Confidence            6799999998643321 1111   223444443    44444554443    1355667666543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.28  E-value=0.0055  Score=52.25  Aligned_cols=39  Identities=28%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++||+++|+|.|+-+|+.+|..|+..|++|.++.|.
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            367899999999999999999999999999999988754

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.28  E-value=0.016  Score=47.73  Aligned_cols=39  Identities=18%  Similarity=0.286  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      -++++|+.+||.|| |.+|...++.|++.|++|++++.+.
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            36799999999998 6999999999999999999998764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.27  E-value=0.12  Score=44.96  Aligned_cols=119  Identities=13%  Similarity=0.174  Sum_probs=74.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +..++.|+|+ |.+|.+++..|+..+.  +|+++|.+.++++....++....+ ...+.... |  +.++          
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------
Confidence            3468999999 9999999999998886  899999998888776666654321 01222222 2  2121          


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                       +.+.|++|..+|...... .+-+   +.+..|..    +++...+.+.+.    ++.+.++++|.-..
T Consensus        74 -~~~aDvVii~ag~~~k~g-~~R~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           74 -AKDADLVVITAGAPQKPG-ETRL---DLVNKNLK----ILKSIVDPIVDS----GFNGIFLVAANPVD  129 (326)
T ss_dssp             -GGGCSEEEECCCCC------CHH---HHHHHHHH----HHHHHHHHHHHH----TCCSEEEECSSSHH
T ss_pred             -hCCCCEEEEcCCCCCCCC-CCHH---HHHHHHHH----HHHHHHHHHHHH----CCCeEEEEeCCcHH
Confidence             236799999999754321 1222   22333433    455566666554    24678888876443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.23  E-value=0.0045  Score=53.92  Aligned_cols=39  Identities=33%  Similarity=0.486  Sum_probs=34.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      +++|+||+|++|..+++.+...|++|++++++.++.+..
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999999999999999987765543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.20  E-value=0.13  Score=44.69  Aligned_cols=115  Identities=16%  Similarity=0.165  Sum_probs=68.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++.|+|+ |.+|.++|..|+..|+ +|++.+++++.++.....+....    ...++... .|.   +       .   
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-------a---   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---E-------Y---   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G-------G---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---H-------H---
Confidence            57999998 9999999999999998 99999999887775443333221    11122221 221   1       1   


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                       ..+.|++|.++|....... +..+   .+..|.    -+.+.+.+.+.+..    +.+.++++|...
T Consensus        80 -l~~aD~VI~avg~p~k~g~-tr~d---l~~~n~----~i~~~i~~~i~~~~----p~a~viv~tNP~  134 (328)
T 2hjr_A           80 -LQNSDVVIITAGVPRKPNM-TRSD---LLTVNA----KIVGSVAENVGKYC----PNAFVICITNPL  134 (328)
T ss_dssp             -GTTCSEEEECCSCCCCTTC-CSGG---GHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSH
T ss_pred             -HCCCCEEEEcCCCCCCCCC-chhh---HHhhhH----HHHHHHHHHHHHHC----CCeEEEEecCch
Confidence             2367999999997543222 2222   122232    23455555555431    345666666533

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.20  E-value=0.017  Score=49.61  Aligned_cols=79  Identities=16%  Similarity=0.133  Sum_probs=52.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +++.|+||.|-+|.+++..|.+.|++|++++|+....   ..+..   ...++.++.+-.   ..+..+++++.....+=
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~---~~~~~---~~aDvVilavp~---~~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV---AESIL---ANADVVIVSVPI---NLTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG---HHHHH---TTCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC---HHHHh---cCCCEEEEeCCH---HHHHHHHHHHHhhcCCC
Confidence            5799999999999999999999999999999986531   11111   133555554432   34677777775443322


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      .+|+..++
T Consensus        93 ~iv~~~~s  100 (298)
T 2pv7_A           93 MLLADLTS  100 (298)
T ss_dssp             SEEEECCS
T ss_pred             cEEEECCC
Confidence            35555544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.20  E-value=0.012  Score=50.58  Aligned_cols=43  Identities=28%  Similarity=0.283  Sum_probs=38.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~   69 (282)
                      ..+++|++++|.|+ |+||+++++.|...|++|++.+|+.+..+
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            35789999999997 99999999999999999999999976543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.17  E-value=0.021  Score=46.40  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=50.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +..++.+++.|.| .|.+|.+++..|++.|++|++.+|+.+           .....++.++.+  . ...++.+++++.
T Consensus        14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av--~-~~~~~~v~~~l~   78 (209)
T 2raf_A           14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAV--P-YPALAALAKQYA   78 (209)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECS--C-HHHHHHHHHHTH
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcC--C-cHHHHHHHHHHH
Confidence            4567778999999 699999999999999999999999865           122334444433  3 566777777665


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                      .... =.+++.++.
T Consensus        79 ~~~~-~~~vi~~~~   91 (209)
T 2raf_A           79 TQLK-GKIVVDITN   91 (209)
T ss_dssp             HHHT-TSEEEECCC
T ss_pred             HhcC-CCEEEEECC
Confidence            4332 235565544

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.16  E-value=0.12  Score=44.72  Aligned_cols=115  Identities=16%  Similarity=0.202  Sum_probs=71.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHh----CCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~----~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++.|+|+ |.+|.+++..|+..|. +|++++++++.++....++...    ....++... .|   .+           .
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-----------a   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YE-----------D   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HH-----------H
Confidence            3678998 9999999999998887 7999999988777656655442    111222221 22   11           1


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +.+.|++|..+|....+.. +-+   +.+..|    .-+.+...+.+.+.    ++.+.++++|....
T Consensus        65 ~~~aD~Vi~~ag~~~k~G~-~r~---dl~~~n----~~i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           65 MRGSDIVLVTAGIGRKPGM-TRE---QLLEAN----ANTMADLAEKIKAY----AKDAIVVITTNPVD  120 (308)
T ss_dssp             GTTCSEEEECCSCCCCSSC-CTH---HHHHHH----HHHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             hCCCCEEEEeCCCCCCCCC-cHH---HHHHHH----HHHHHHHHHHHHHH----CCCeEEEEeCCchH
Confidence            2378999999997654322 222   223333    33456666666654    14567888776443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.14  E-value=0.015  Score=52.23  Aligned_cols=42  Identities=21%  Similarity=0.094  Sum_probs=37.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      +.+.+++|+|+ |.+|..+++.+...|++|++++++...++..
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56789999999 8999999999999999999999998775554

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.13  E-value=0.11  Score=45.05  Aligned_cols=120  Identities=16%  Similarity=0.106  Sum_probs=69.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++.|+|+ |.+|..++..|+..|. +|++++++++.++.....+....    ...++... .|.   +           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------
Confidence            57899998 9999999999999998 99999999887765555544321    11122211 121   1           


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhh-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .+.+.|++|.++|..........|. -.+.+..|..    +.+.+.+.+.+..    +.+.++++|....
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~----i~~~i~~~i~~~~----p~a~iiv~tNP~~  130 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNK----IMIEIGGHIKKNC----PNAFIIVVTNPVD  130 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHH----HHHHHHHHHHHHC----TTSEEEECSSSHH
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHH----HHHHHHHHHHHHC----CCeEEEEecCChH
Confidence            1236799999999754322110000 0111333332    4455555555441    3567777766433

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.12  E-value=0.0027  Score=57.26  Aligned_cols=37  Identities=27%  Similarity=0.419  Sum_probs=33.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEE-EEEc
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVV-MGVR   63 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vi-i~~r   63 (282)
                      ..+++|++++|+| .|.+|..+|+.|.+.|++|+ +.++
T Consensus       213 g~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          213 GLDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            3578999999998 69999999999999999988 7777

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.12  E-value=0.007  Score=52.90  Aligned_cols=72  Identities=15%  Similarity=0.122  Sum_probs=55.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+.++|.|+ |.+|..++++|.+.|. |++++++++..+ ..    +    ..+.++.+|.++++.++++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~----~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R----SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H----TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h----CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            457999997 8999999999999999 999999987755 22    1    2477899999998876653      1236


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      .|.++.+.+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            778887664

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.11  E-value=0.12  Score=44.57  Aligned_cols=116  Identities=18%  Similarity=0.186  Sum_probs=67.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC----CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++.|+|+ |.+|.++|..|++.|+ +|++++++.+.++.....+....    ...++... .|   .+           
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d---~~-----------   68 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DD---YA-----------   68 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HH-----------
Confidence            57899998 9999999999999998 99999999877665432222210    01122211 12   11           


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      ...+.|+||.++|....... +.++.   +..|    ..+.+.+.+.+.+..    +.+.++++|....
T Consensus        69 a~~~aDiVi~avg~p~~~g~-~r~d~---~~~~----~~i~~~i~~~i~~~~----~~~iii~~sNp~~  125 (317)
T 2ewd_A           69 DISGSDVVIITASIPGRPKD-DRSEL---LFGN----ARILDSVAEGVKKYC----PNAFVICITNPLD  125 (317)
T ss_dssp             GGTTCSEEEECCCCSSCCSS-CGGGG---HHHH----HHHHHHHHHHHHHHC----TTSEEEECCSSHH
T ss_pred             HhCCCCEEEEeCCCCCCCCC-cHHHH---HHhh----HHHHHHHHHHHHHHC----CCcEEEEeCChHH
Confidence            11367999999997544322 22221   2222    223444445544431    3456666666443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.11  E-value=0.0049  Score=52.51  Aligned_cols=44  Identities=18%  Similarity=0.193  Sum_probs=38.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .++++++++|.|+ |++|++++..|.+.|++|.+++|+.++.++.
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            4678899999996 7999999999999999999999997665443

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.09  E-value=0.011  Score=49.82  Aligned_cols=47  Identities=30%  Similarity=0.315  Sum_probs=39.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      .+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.++..+++
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            46788 9999997 78999999999999999999999987766655443

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=96.06  E-value=0.013  Score=57.41  Aligned_cols=63  Identities=22%  Similarity=0.302  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh-------------------hhHHHHHHHHHHhCCCCceeEEEc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMEL   89 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~-------------------~~~~~~~~~l~~~~~~~~v~~~~~   89 (282)
                      ++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+..
T Consensus       410 ~~~~vlvvG~-GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~  488 (805)
T 2nvu_B          410 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  488 (805)
T ss_dssp             HTCCEEEECC-SSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            6789999998 8899999999999998 799998652                   235566777777777778888777


Q ss_pred             cCCC
Q 023438           90 DLSS   93 (282)
Q Consensus        90 Dvs~   93 (282)
                      ++++
T Consensus       489 ~~~~  492 (805)
T 2nvu_B          489 KIQD  492 (805)
T ss_dssp             CGGG
T ss_pred             cccc
Confidence            7654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.05  E-value=0.13  Score=44.54  Aligned_cols=116  Identities=16%  Similarity=0.220  Sum_probs=68.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.|+|+ |.+|.+++..|++.|+  +|++++++++.++.....+....+ ....... .  ++.+.           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hC
Confidence            5789998 9999999999999998  999999998877765554433211 0011111 1  22221           13


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      +.|+||.+++....... +  .. +.+..|..    +.+.+.+.+.+.    .+.+.+|+++....
T Consensus        67 ~aDvViiav~~~~~~g~-~--r~-dl~~~n~~----i~~~i~~~i~~~----~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKPGE-T--RL-QLLGRNAR----VMKEIARNVSKY----APDSIVIVVTNPVD  120 (319)
T ss_dssp             TCSEEEECCCCCCCSSC-C--HH-HHHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCEEEEccCCCCCCCC-C--HH-HHHHHHHH----HHHHHHHHHHhh----CCCeEEEEeCCcHH
Confidence            67999999986443211 1  11 22333333    344445555443    13456777766443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.04  E-value=0.027  Score=47.04  Aligned_cols=77  Identities=13%  Similarity=0.134  Sum_probs=55.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++.|+|++|.+|+.+++.+.+. |++|+.+......+++..    ..  .  .. +..|.+.++.....+..+.+.  ..
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~--~--~D-vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG--N--TE-VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT--T--CC-EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc--C--Cc-EEEEccChHHHHHHHHHHHHc--CC
Confidence            5899999999999999999865 888775543333333322    21  1  22 557999999988888776555  57


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      ++|+...|+
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            888888874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.03  E-value=0.12  Score=44.48  Aligned_cols=114  Identities=17%  Similarity=0.146  Sum_probs=65.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHh----CCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~----~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++.|+|+ |.+|..++..|+..|. +|++++++++.++....++.+.    ....++... .|.   +.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---AD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---HH----------
Confidence            47899999 9999999999999996 9999999987776555555431    111122211 221   11          


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                       +.+.|++|.++|....... +..   +.+..|.    -+.+...+.+.+.    ++.+.++++|..
T Consensus        68 -~~~aD~Vi~a~g~p~~~g~-~r~---dl~~~n~----~i~~~i~~~i~~~----~p~a~vi~~tNP  121 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPRKPGM-SRE---DLIKVNA----DITRACISQAAPL----SPNAVIIMVNNP  121 (309)
T ss_dssp             -GTTCSEEEECCCC---------C---HHHHHHH----HHHHHHHHHHGGG----CTTCEEEECCSS
T ss_pred             -HCCCCEEEEcCCCCCCCCC-CHH---HHHHHHH----HHHHHHHHHHHhh----CCCeEEEEcCCc
Confidence             2367999999997543211 111   1222232    3445555555553    134556665553

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.99  E-value=0.047  Score=49.50  Aligned_cols=42  Identities=26%  Similarity=0.306  Sum_probs=37.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~   68 (282)
                      ...+.||+++|.|. |.||+.+|+.|...|++|++++++....
T Consensus       242 g~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a  283 (464)
T 3n58_A          242 DVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICA  283 (464)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            46789999999997 6799999999999999999999887543

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.99  E-value=0.0071  Score=55.59  Aligned_cols=45  Identities=16%  Similarity=0.042  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCC-hhHHHHHHHHHHc----CCEEEEEEcChhhHHHHHHH
Q 023438           30 SGLTAIVTGATS-GIGTETARVLALR----GVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        30 ~~~~~lItG~s~-gIG~aia~~l~~~----G~~Vii~~r~~~~~~~~~~~   74 (282)
                      +.+++.|.||++ |.|.+++..|++.    |.+|++.+++++.++...+.
T Consensus         2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~   51 (480)
T 1obb_A            2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI   51 (480)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHH
Confidence            346789999998 8999999988854    88999999999887664433

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.97  E-value=0.14  Score=44.08  Aligned_cols=115  Identities=22%  Similarity=0.133  Sum_probs=67.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHc--CCEEEEEEcChhhHHHHHHHHHHh---C-CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKE---I-PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~--G~~Vii~~r~~~~~~~~~~~l~~~---~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++.|+|+ |.+|.+++..|++.  |++|++++++++.++.....+...   + ...++...    +|.++          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS----NDYAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE----SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC----CCHHH----------
Confidence            5789998 99999999999985  789999999988776544333221   0 11111111    22211          


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                       ..+.|++|.+++...... .+   -.+.+..|..-    ++.+.+.+.+.    .+.+.+++++....
T Consensus        67 -l~~aDvViiav~~p~~~g-~~---r~dl~~~n~~i----~~~i~~~i~~~----~~~~~viv~tNP~~  122 (310)
T 1guz_A           67 -TANSDIVIITAGLPRKPG-MT---REDLLMKNAGI----VKEVTDNIMKH----SKNPIIIVVSNPLD  122 (310)
T ss_dssp             -GTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHH----CSSCEEEECCSSHH
T ss_pred             -HCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHH----HHHHHHHHHHh----CCCcEEEEEcCchH
Confidence             236799999998543221 11   12334455544    33444444433    13567777766443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.94  E-value=0.013  Score=49.65  Aligned_cols=36  Identities=14%  Similarity=0.076  Sum_probs=33.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ++|++++|.|+|+-+|+.+|..|...|++|.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999988653

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.93  E-value=0.026  Score=49.26  Aligned_cols=78  Identities=15%  Similarity=0.134  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++++|+|+ |++|...++.+...|+. +++++++.++++. .+++     +... .  .|.++.+ ..+..+.+.. .
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~l-----Ga~~-~--i~~~~~~-~~~~~~~~~~-~  227 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSF-----GAMQ-T--FNSSEMS-APQMQSVLRE-L  227 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT-----TCSE-E--EETTTSC-HHHHHHHHGG-G
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHc-----CCeE-E--EeCCCCC-HHHHHHhhcc-c
Confidence            6889999987 89999999999999986 5677777765433 2332     3322 2  2444422 3333344332 2


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      +..|+++.++|
T Consensus       228 ~g~d~v~d~~G  238 (346)
T 4a2c_A          228 RFNQLILETAG  238 (346)
T ss_dssp             CSSEEEEECSC
T ss_pred             CCccccccccc
Confidence            46799999988

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.93  E-value=0.012  Score=50.03  Aligned_cols=39  Identities=36%  Similarity=0.431  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++||.++|.|.|+-+|+.+|..|+..|++|.++.+.
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            367899999999999999999999999999999988653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.92  E-value=0.034  Score=46.68  Aligned_cols=88  Identities=14%  Similarity=0.222  Sum_probs=55.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHh-CCC-----CceeEEEccCCCHHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKE-IPS-----AKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~-~~~-----~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      +.++.|.|+ |.+|.+++..|++.|++ |.+++|+.+..+...+.+.-. ..+     ..+..+..=+ ....+..++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHHH
Confidence            457889997 99999999999999998 889999988776655432100 000     1122222222 23456777777


Q ss_pred             HHhcCCCccEEEEcCCC
Q 023438          104 YNIQHHQLNILINNAGI  120 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~  120 (282)
                      +.....+=.+++++++.
T Consensus        88 l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHTTCCTTCEEEECCTT
T ss_pred             HHhhcCCCcEEEECCCC
Confidence            76544333467777653

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.89  E-value=0.014  Score=50.04  Aligned_cols=39  Identities=26%  Similarity=0.364  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++|+.++|.|.|+-+|+.+|..|+..|++|.++.|.
T Consensus       160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            357899999999999999999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-33
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-33
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-32
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-31
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-31
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-30
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-30
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-28
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-26
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-26
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-26
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-26
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-25
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	9e-25
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-24
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-24
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-24
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-24
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-24
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-23
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-22
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-22
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-22
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-22
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-22
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-21
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-21
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-21
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-21
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-20
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-20
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-20
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-20
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-19
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-18
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-18
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-18
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-18
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-18
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-17
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-17
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-17
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-17
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-16
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	5e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-15
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-14
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-14
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-12
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-12
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-08
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-06
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.001
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 2e-37
 Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 18/212 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +   + +  S    QH  ++I INNAG+    T    S    +  F  N L   + T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
             +MK+   ++  +G IIN++S                      +    YS +K A    
Sbjct: 132 YQSMKE---RNVDDGHIININSMSGHRVL-------------PLSVTHFYSATKYAVTAL 175

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
              L + L+E    I A  + PG + T     
Sbjct: 176 TEGLRQELREAQTHIRATCISPGVVETQFAFK 207

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  128 bits (322), Expect = 1e-36
 Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 23/254 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           S  + +VTGA  GIG    + L       H++   RD+    +     +K I  ++V  +
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVL 56

Query: 88  ELDLSSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLG 142
            L ++   S+  F S+    +    L++LINNAG++   GT    ++  I  Q   N   
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
             LLT  LL  +K     S   G  ++VS                    S      AY  
Sbjct: 117 VVLLTQKLLPLLKN--AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLF---RSMNTILHAL--- 256
           SK A  +    LA  LK+D   +   +  PG + TN+   N+     +S   ++ +    
Sbjct: 175 SKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKL 232

Query: 257 -PGIAGKCLLKNVQ 269
                G+  ++N++
Sbjct: 233 DNSHNGRFFMRNLK 246

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 2e-33
 Identities = 56/241 (23%), Positives = 87/241 (36%), Gaps = 40/241 (16%)

Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E         +LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
            L S+R        ++  L++L+NNAGI              E+   TN  G   +   L
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLA--------------------YHEGIRFDKIND 190
           L  +K        +GR++NVSS     A                       G+    + D
Sbjct: 124 LPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 191 PS------GYNGFRAYSQSKLANILHANELARRLKEDGV--DITANSVHPGAIATNIIRH 242
                         AY  +K+   + +   AR+L E      I  N+  PG + T++   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 243 N 243
            
Sbjct: 237 K 237

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-33
 Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 25/218 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   ++TGA  GIG  TA   A     +V+   +    ++           AKV    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D S+   + + A +   +   ++IL+NNA        F      IE  F  N L HF  T
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M K        G I+ V+S    +                     AY  SK A 
Sbjct: 124 KAFLPAMTK-----NNHGHIVTVASAAGHV---------------SVPFLLAYCSSKFAA 163

Query: 208 ILHANELARRLKEDGVD-ITANSVHPGAIATNIIRHNS 244
           +     L   L    +  +    + P  + T  I++ S
Sbjct: 164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS 201

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 6e-32
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 25/216 (11%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ++G    A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   
Sbjct: 1   VNGK--VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 58

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
           ++ D++    +R+   +      +L+IL+NNAG+       ++ N E     N +     
Sbjct: 59  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISG 112

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T L LD M K  +  G  G IIN+SS    +                      Y  SK  
Sbjct: 113 TYLGLDYMSK--QNGGEGGIIINMSSLAGLM---------------PVAQQPVYCASKHG 155

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +      A         +  N++ PG + T I+  
Sbjct: 156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES 191

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  115 bits (290), Expect = 1e-31
 Identities = 54/232 (23%), Positives = 87/232 (37%), Gaps = 27/232 (11%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +D +    I   A  GIG +T+R L  R +   + +  +     + E      P   +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITF 59

Query: 87  MELDLS-SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFL 145
              D++  +A  +    +   Q   ++ILIN AGI+          IE   A N  G   
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVN 113

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            T  +LD   K  RK G  G I N+ S                   +  +    YS SK 
Sbjct: 114 TTTAILDFWDK--RKGGPGGIIANICSVTGF---------------NAIHQVPVYSASKA 156

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 257
           A +   N LA+     G  +TA S++PG   T ++   + +  +   +  L 
Sbjct: 157 AVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELL 206

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  114 bits (287), Expect = 4e-31
 Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 29/220 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           +   AI+TG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++ 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLG 142
            D+++ A      S    +  +L+IL+NNAG         T    S ++ +     N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              LT   +  +  T     GE   I+  + G                      F  YS 
Sbjct: 124 VIALTKKAVPHLSST----KGEIVNISSIASGLH----------------ATPDFPYYSI 163

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           +K A   +    A  L + G  I  NS+ PG +AT     
Sbjct: 164 AKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSA 201

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  110 bits (277), Expect = 8e-30
 Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 28/214 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  SG+G E  ++L   G  V     + AAG+ +   +       +   +  
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRH 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D+SS A      +    +   LN+L+NNAGI+  G       ++       N    F+  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  MK+T       G IIN++S    L                   +  YS SK A 
Sbjct: 120 QQGIAAMKETG------GSIINMASVSSWL---------------PIEQYAGYSASKAAV 158

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  A   ++ G  I  NS+HP  I T +++
Sbjct: 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 9e-30
 Identities = 48/216 (22%), Positives = 77/216 (35%), Gaps = 32/216 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG    R     G  VV+  +D + G+ +++ +           +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILC 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA---GIMGTPFMLSKDNIELQFATNHLGHFLL 146
           D++    V+   SE   +  +L+ ++NNA        P   S          N LG + L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           T L L  ++K       +G +IN+SS                    G      Y  +K A
Sbjct: 119 TKLALPYLRK------SQGNVINISSLVGA---------------IGQAQAVPYVATKGA 157

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  LA      G  +  N + PG I T +   
Sbjct: 158 VTAMTKALALDESPYG--VRVNCISPGNIWTPLWEE 191

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  106 bits (265), Expect = 4e-28
 Identities = 53/215 (24%), Positives = 76/215 (35%), Gaps = 32/215 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG   A+  A  G  V +       GK+V E I            ++
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAI-------GGAFFQV 55

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DL        F  E      ++++L+NNA I   G+   +           N      L+
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            L    M+K      G G I+NV+S               +          AY+ SK   
Sbjct: 116 ALAAREMRK-----VGGGAIVNVAS---------------VQGLFAEQENAAYNASKGGL 155

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           +     LA  L      I  N+V PGAIAT  +  
Sbjct: 156 VNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLE 188

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  102 bits (256), Expect = 1e-26
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 31/236 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAI--RNLGRRVLTVKC 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +  MK+      G GRIIN++S  + L                   +  Y  +K AN
Sbjct: 120 KAFVPGMKR-----NGWGRIINLTSTTYWL---------------KIEAYTHYISTKAAN 159

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL---FRSMNTILHALPGIA 260
           I     LA  L +DG  IT N++ P  + T     ++L   F  +  +L A+P + 
Sbjct: 160 IGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ 213

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  102 bits (256), Expect = 1e-26
 Identities = 49/216 (22%), Positives = 78/216 (36%), Gaps = 13/216 (6%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I     T IVTG   GIG    R +A  G +V +  R  A   +V E + KE    K  A
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKA 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
            + D+S+   V     + +     ++ LI NA    +    + +     FA  +  +   
Sbjct: 64  YQCDVSNTDIVTKTIQQIDADLGPISGLIANA--GVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
                  + K   +   +G I+  SS   ++     +         G      Y+ SK A
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN--------GSLTQVFYNSSKAA 173

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  LA      G  I  N++ PG + T+   H
Sbjct: 174 CSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAH 207

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (257), Expect = 2e-26
 Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 30/217 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-----IAAGKDVKETIVKEIPSAKV 84
            G   +VTGA  G+G   A   A RG  VV+         +  G    + +V+EI   + 
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRG 64

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLG 142
                +  S+ +             ++++++NNAGI+   +   +S ++ ++    +  G
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            F +T    D MKK        GRII  +S                    G  G   YS 
Sbjct: 125 SFQVTRAAWDHMKK-----QNYGRIIMTASASGIY---------------GNFGQANYSA 164

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNI 239
           +KL  +  AN L    +++   I  N++ P A +   
Sbjct: 165 AKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMT 199

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  101 bits (252), Expect = 3e-26
 Identities = 50/215 (23%), Positives = 74/215 (34%), Gaps = 24/215 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AI+TG T GIG   A      G  V++  R    G+   +++       ++   + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQH 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D S                  ++ L+NNAGI     +   +        A N  G F  T
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            L +  MK   +  G    I   S EG                  G     AY+ SK A 
Sbjct: 122 RLGIQRMKN--KGLGAS-IINMSSIEGFV----------------GDPSLGAYNASKGAV 162

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            + +   A        D+  N+VHPG I T ++  
Sbjct: 163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 3e-26
 Identities = 49/216 (22%), Positives = 77/216 (35%), Gaps = 24/216 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   IVTGA+ GIG E A  LA  G HVV+  R     + V    + E+ +A    +  
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAG 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
            +  +     F ++       L++LI N         F     ++      N L + +LT
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 131

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  +K+        G I+ VSS   ++                Y    AYS SK A 
Sbjct: 132 VAALPMLKQ------SNGSIVVVSSLAGKV---------------AYPMVAAYSASKFAL 170

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
               + + +      V+++      G I T      
Sbjct: 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA 206

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 99.7 bits (248), Expect = 2e-25
 Identities = 45/220 (20%), Positives = 83/220 (37%), Gaps = 29/220 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           S  T I+TG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++ 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLG 142
            D+++        +    Q  ++++L+NNAG         T      D        N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
              +T  +   +  +     GE   ++    G +                    F  Y+ 
Sbjct: 124 VIEMTKKVKPHLVAS----KGEIVNVSSIVAGPQ----------------AQPDFLYYAI 163

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           +K A   +    A  L + G  I  NSV PG + T     
Sbjct: 164 AKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNA 201

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 97.4 bits (242), Expect = 9e-25
 Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 33/217 (15%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ++ SGL A+VTGA  GIG +T + L   G  VV   R  +    + +          ++ 
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEP 54

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHF 144
           + +DL    +              +++L+NNA +  M     ++K+  +  F+ N    F
Sbjct: 55  VCVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            ++ ++     +     G  G I+NVSS    +                +     YS +K
Sbjct: 111 QVSQMVA----RDMINRGVPGSIVNVSSMVAHV---------------TFPNLITYSSTK 151

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A  +    +A  L      I  NSV+P  + T++ +
Sbjct: 152 GAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGK 186

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 97.0 bits (241), Expect = 2e-24
 Identities = 53/231 (22%), Positives = 80/231 (34%), Gaps = 27/231 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T +VTG T GIG       A  G  +    R+     +      K+    +V     
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 64

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
           D S            +     +L+ILINN G +   P +  + ++     +TN    + L
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 124

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           + L    +K +     G G II +SS    ++   G                 YS +K A
Sbjct: 125 SQLAHPLLKAS-----GCGNIIFMSSIAGVVSASVGS---------------IYSATKGA 164

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALP 257
               A  LA     DG  I AN+V P  IAT +            ++   P
Sbjct: 165 LNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKP 213

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 97.0 bits (241), Expect = 2e-24
 Identities = 55/216 (25%), Positives = 79/216 (36%), Gaps = 27/216 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     D       +    KV+A   
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 64

Query: 90  DLSSLASVRNFASE-YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLL 146
           DLSS +  +   +   N  H +LNIL+NNAGI+        + ++  L  + N    + L
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           + L    +K     S     +   S  G                         Y  +K A
Sbjct: 125 SVLAHPFLK----ASERGNVVFISSVSGAL----------------AVPYEAVYGATKGA 164

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  LA    +D   I  N V PG IAT+++  
Sbjct: 165 MDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEM 198

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 95.8 bits (238), Expect = 4e-24
 Identities = 49/217 (22%), Positives = 71/217 (32%), Gaps = 29/217 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T I+TG   G+G E AR     G  VV+       G      +             L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++     +   +    +   ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  MK       G G I+N+SS    +                     +Y  SK   
Sbjct: 119 KTVIPAMKD-----AGGGSIVNISSAAGLMGLALTS---------------SYGASKWGV 158

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
              +   A  L  D   I  NSVHPG   T +     
Sbjct: 159 RGLSKLAAVELGTD--RIRVNSVHPGMTYTPMTAETG 193

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 95.9 bits (238), Expect = 5e-24
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 27/218 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHF 144
            D++  +   +  +    +  +++IL+NNAG              +  +  F  N     
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            +T                            +           +  P  ++G+  Y+ +K
Sbjct: 123 EMTQ--------------------KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK 162

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            A   +    A  L + G  +  NSV PGA+AT  +  
Sbjct: 163 AALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGA 198

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 8e-24
 Identities = 45/219 (20%), Positives = 73/219 (33%), Gaps = 28/219 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDA 86
            G  AIVTG  +GIG    + L   G +VV+  R +   K   + +   +P    A+V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHF 144
           ++ ++ +   V N          ++N L+NN G   +     +S         TN  G F
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            +   +  +  K        G I+N+                      G+        ++
Sbjct: 131 YMCKAVYSSWMK-----EHGGSIVNIIVPTKA----------------GFPLAVHSGAAR 169

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
                    LA      G  I  N V PG I +     N
Sbjct: 170 AGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVEN 206

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 92.0 bits (228), Expect = 8e-23
 Identities = 43/217 (19%), Positives = 77/217 (35%), Gaps = 32/217 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA  GIG  T  + A  G  +V    +    ++  E +           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  ASV    +E      +L+ +++ AG       + +  ++ EL    N  G FL+ 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
               + M++        G I+  +S  +                 G  G   Y+ S    
Sbjct: 117 KAASEAMRE-----KNPGSIVLTASRVYL----------------GNLGQANYAASMAGV 155

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
           +     LA  L   G  I  N++ PG I T +     
Sbjct: 156 VGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVP 190

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 91.6 bits (227), Expect = 1e-22
 Identities = 30/213 (14%), Positives = 58/213 (27%), Gaps = 33/213 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TAIVT      G  +A  L+  G  V                   E+ +      +L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ--------KDELEAFAETYPQLKPM 53

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S              + Q+++L++N        P    + ++         +  F L N 
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +   M                     +      I          +     Y+ ++     
Sbjct: 114 VASQM--------------------KKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 153

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            AN L++ L E    I   ++ P  + +    +
Sbjct: 154 LANALSKELGEYN--IPVFAIGPNYLHSEDSPY 184

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 2e-22
 Identities = 43/213 (20%), Positives = 71/213 (33%), Gaps = 26/213 (12%)

Query: 34  AIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMEL 89
            ++TG +SGIG   A  LA        V   +RD+     + E       P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+    SV             + +     G++G    L +D +      N +G   +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L  MK+      G GR++   S G  +               G      Y  SK A   
Sbjct: 125 FLPDMKR-----RGSGRVLVTGSVGGLM---------------GLPFNDVYCASKFALEG 164

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               LA  L   G  +  + +  G + T  +  
Sbjct: 165 LCESLAVLLLPFG--VHLSLIECGPVHTAFMEK 195

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 90.6 bits (224), Expect = 4e-22
 Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 19/213 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    ++TG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+S  A V  + +    +  +++   NNAG +      ++     +F      +     L
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAG-IEGKQNPTESFTAAEFDKVVSINLRGVFL 121

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
            L+ + K  R+ G    +   S  G R                G      Y+ +K   + 
Sbjct: 122 GLEKVLKIMREQGSGMVVNTASVGGIR----------------GIGNQSGYAAAKHGVVG 165

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                A      G  I  N++ PGAI T ++ +
Sbjct: 166 LTRNSAVEYGRYG--IRINAIAPGAIWTPMVEN 196

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 90.2 bits (223), Expect = 6e-22
 Identities = 45/225 (20%), Positives = 80/225 (35%), Gaps = 30/225 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +G  A+ TGA  GIG   A  L  RG  VV+            E +V E+     +  A+
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAI 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFL 145
           + D+S  + V     +       L+ +++N+G+        ++++  +  F  N  G F 
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +    L   ++     GG   + +  +                    G      Y+ SK 
Sbjct: 122 VAQQGLKHCRR-----GGRIILTSSIAAVMT----------------GIPNHALYAGSKA 160

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMN 250
           A        A      G  +T N + PG + T++   NS   +  
Sbjct: 161 AVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPG 203

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 6e-22
 Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 33/214 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG  T + L   G  VV   R  A      +++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECP--GIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA +        ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
            ++     +     G  G I+NVSS+  + A                     Y  +K A 
Sbjct: 116 QIVA----RGLIARGVPGAIVNVSSQCSQRAVT---------------NHSVYCSTKGAL 156

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            +    +A  L      I  N+V+P  + T++ +
Sbjct: 157 DMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQ 188

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 90.1 bits (223), Expect = 6e-22
 Identities = 47/217 (21%), Positives = 76/217 (35%), Gaps = 28/217 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AI+TG   GIG  TA++    G  VV+       G+ V   I        +  +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFL 145
           D++    VRN       +H +L+I+  N G++ T          ++ +     N  G FL
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
           +       M     K G      ++SS                   +G      Y+ +K 
Sbjct: 122 VAKHAARVMIP--AKKGSIVFTASISSFT-----------------AGEGVSHVYTATKH 162

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           A +     L   L E G  I  N V P  +A+ ++  
Sbjct: 163 AVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTD 197

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 89.7 bits (222), Expect = 1e-21
 Identities = 42/223 (18%), Positives = 70/223 (31%), Gaps = 36/223 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   ++TG  SG+G          G  V +  +      +++           V  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVG 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLG 142
           D+ SL   +  AS    +  +++ LI NAGI          P        +  F  N  G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
           +       L  +            I  +S+ G                     G   Y+ 
Sbjct: 119 YIHAVKACLPALVA-----SRGNVIFTISNAGFY----------------PNGGGPLYTA 157

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSL 245
           +K A +    ELA  L      +  N V  G I +++   +SL
Sbjct: 158 AKHAIVGLVRELAFEL---APYVRVNGVGSGGINSDLRGPSSL 197

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 88.6 bits (219), Expect = 2e-21
 Identities = 38/213 (17%), Positives = 69/213 (32%), Gaps = 22/213 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRC 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTN 148
           D+S+   V+        +  +L+ ++N AGI    P      +   Q    +L       
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
               ++ + +              E                          Y+ SK    
Sbjct: 123 REAFSLLRESDNPSIINIGSLTVEEVTMPNISA------------------YAASKGGVA 164

Query: 209 LHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                LA+     G  I  N + PG   T +  
Sbjct: 165 SLTKALAKEWGRYG--IRVNVIAPGWYRTKMTE 195

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.9 bits (217), Expect = 4e-21
 Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 36/230 (15%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPS 81
           DG+  +    ++TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P 
Sbjct: 2   DGLGCA--VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD 59

Query: 82  AKVDAMELDLSSLASVRNFASEY----NIQHHQLNILINNAGIMGTPFM-----LSKDNI 132
            KV     DL + A V+   S        +  Q  +LINNA  +G              +
Sbjct: 60  LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
              +A N      LT+  L+  + +   S                     +    +    
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV------------------VNISSLCALQ 161

Query: 193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            Y G+  Y   K A  +    LA         +   S  PG +  ++ + 
Sbjct: 162 PYKGWGLYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPLDNDMQQL 207

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 87.4 bits (216), Expect = 5e-21
 Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 25/220 (11%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
           +D +   G  AI+TGA +GIG E A   A  G  VV+   +  A   V + I +     +
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQ 61

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLG 142
             A   D++S   +   A     +  +++IL+NNAG  G  PF +   +    +  N   
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFS 121

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQ 202
            F L+ L+   M                     +      +    +   +      +Y+ 
Sbjct: 122 FFHLSQLVAPEM--------------------EKNGGGVILTITSMAAENKNINMTSYAS 161

Query: 203 SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           SK A       +A  L E    I  N + PGAI T+ ++ 
Sbjct: 162 SKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKS 199

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.4 bits (216), Expect = 5e-21
 Identities = 57/212 (26%), Positives = 85/212 (40%), Gaps = 22/212 (10%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA  GIG E A++LA    HV+   R   +   V + I       +      D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
               +    ++   +H  ++IL+NNAGI      L   N E +     L   L +   + 
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED---VLRTNLNSLFYIT 126

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
                   +   GRIIN+SS               I   +G  G   YS SK   I    
Sbjct: 127 QPISKRMINNRYGRIINISS---------------IVGLTGNVGQANYSSSKAGVIGFTK 171

Query: 213 ELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
            LA+ L      IT N++ PG I++++    S
Sbjct: 172 SLAKELASRN--ITVNAIAPGFISSDMTDKIS 201

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 33/218 (15%)

Query: 34  AIVTGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            ++TGA  GIG   A   A    H       +V+  R  A  + +      E   A  D 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 144
           +  D+S +A VR   +    ++  ++ L+NNAG+   G    L++++ +    TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
            LT  L   M++        G I  ++S                     +     Y  SK
Sbjct: 122 FLTQALFALMER-----QHSGHIFFITSVAATK---------------AFRHSSIYCMSK 161

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                    +    ++    +    V PGA+ T +   
Sbjct: 162 FGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGK 197

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 2e-20
 Identities = 42/213 (19%), Positives = 74/213 (34%), Gaps = 20/213 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A +TG  +G+G     +L+  G   V+  R +   K   E I  +  + KV A++ 
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQC 82

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+     V+N  SE        NI+INNA   G     ++      + T        T  
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           +   + K   K+      +++++                   +G       + +K     
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAE---------------TGSGFVVPSASAKAGVEA 185

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +  LA    + G  +  N + PG I T     
Sbjct: 186 MSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFS 216

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.1 bits (210), Expect = 3e-20
 Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 29/215 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+V+G   G+G    R +   G  VV G      GK +   +     +     + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D++  A  +            L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  MK+      G G IIN+SS                           Y+ +K A 
Sbjct: 120 RAVVKPMKE-----AGRGSIINISSIEGLAGTVACH---------------GYTATKFAV 159

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                  A  L   G  I  NS+HPG + T +   
Sbjct: 160 RGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDW 192

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 85.2 bits (210), Expect = 4e-20
 Identities = 58/215 (26%), Positives = 80/215 (37%), Gaps = 24/215 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG+TSGIG   A  LA +G  +V+     AA  +     +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DLS   +VR        Q  +++IL+NNAGI           +  +   A N    F  T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  MKK      G GRIIN                   +         AY  +K   
Sbjct: 123 AAALPHMKK-----QGFGRIIN---------------IASAHGLVASANKSAYVAAKHGV 162

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           +      A      G  ITAN++ PG + T ++  
Sbjct: 163 VGFTKVTALETAGQG--ITANAICPGWVRTPLVEK 195

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 81.7 bits (201), Expect = 5e-19
 Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 29/213 (13%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
            +VTGA+ GIG   A  L   G  V++            E + K+I +   +      D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYAR---SAKAAEEVSKQIEAYGGQAITFGGDV 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN--HLGHFLLTNL 149
           S  A V             +++++NNAGI     ++     +     +    G FL T  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
               M K       +GRIIN++S               +    G  G   Y+ +K   I 
Sbjct: 121 ATKIMMK-----KRKGRIINIAS---------------VVGLIGNIGQANYAAAKAGVIG 160

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +   AR        I  N V PG IA+++   
Sbjct: 161 FSKTAAREGASRN--INVNVVCPGFIASDMTAK 191

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 81.0 bits (199), Expect = 1e-18
 Identities = 40/214 (18%), Positives = 74/214 (34%), Gaps = 21/214 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D++S  +V            +++ L NNAG  G    +     +       +      ++
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
           L    ++   ++   GRI+N +S                          AY  SK A I 
Sbjct: 122 LKAVSRQMITQN--YGRIVNTASMAGVKGPPNMA---------------AYGTSKGAIIA 164

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
                A  L      I  N++ PG +    +   
Sbjct: 165 LTETAALDLAPYN--IRVNAISPGYMGPGFMWER 196

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 80.9 bits (199), Expect = 1e-18
 Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 28/216 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G   ++TG+++G+G   A   A     VV+  R     +D   ++++EI     +  A+
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAV 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           + D++  + V N       +  +L+++INNAG+    +   +S  +      TN  G FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
            +   +                               I    +++   +  F  Y+ SK 
Sbjct: 123 GSREAIKYFV-------------------ENDIKGTVINMSSVHEKIPWPLFVHYAASKG 163

Query: 206 ANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
              L    LA      G  I  N++ PGAI T I  
Sbjct: 164 GMKLMTETLALEYAPKG--IRVNNIGPGAINTPINA 197

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 79.5 bits (195), Expect = 3e-18
 Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 37/216 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG  SG+G   A  L  RG  VV+                       +  +E D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVT 48

Query: 93  SLASVRNFASEYNIQHHQLNILINN-----AGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
               VR   +    +     ++          I+G       ++       N LG F + 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 148 NLLLDTMKK-TARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            L    M++      G  G I+N +S                    G  G  AY+ SK  
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTASVAAFE---------------GQIGQAAYAASKGG 153

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +      AR L   G  I   +V PG   T +++ 
Sbjct: 154 VVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQG 187

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 79.4 bits (194), Expect = 4e-18
 Identities = 42/217 (19%), Positives = 75/217 (34%), Gaps = 15/217 (6%)

Query: 33  TAIVTGATSGIGTETARVL---ALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + ++TG   G+G    + L        H+    R+    K++++ + K   +  +  ++L
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLL 146
                        E   +   LN+L NNAGI         +    +     TN +   +L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
               L  +KK A+ +       +      R A             +   G  AY  SK A
Sbjct: 123 AKACLPLLKKAAKAN------ESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSA 176

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRHN 243
                  L+  L      I   S+HPG + T++   +
Sbjct: 177 LNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS 211

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 78.3 bits (192), Expect = 9e-18
 Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 29/217 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A  LA RG  V+         + + + +      A    + L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLML 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF--ATNHLGHFLLT 147
           +++  AS+ +   +   +  +++IL+NNAGI     ++   + E      TN    F L+
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
             ++  M K        GRII + S    +               G  G   Y+ +K   
Sbjct: 118 KAVMRAMMK-----KRHGRIITIGSVVGTM---------------GNGGQANYAAAKAGL 157

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS 244
           I  +  LAR +   G  IT N V PG I T++ R  S
Sbjct: 158 IGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALS 192

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 78.2 bits (192), Expect = 1e-17
 Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 20/211 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGATSGIG E AR L   G+ V +  R     +   + + +     + D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           + S+  +    +    ++  +++L+NNAG        ++   EL           +  + 
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVT 118

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
              +K       G GRI+N++S G +                       YS SK   +  
Sbjct: 119 KQVLKAGGMLERGTGRIVNIASTGGKQGVVH---------------AAPYSASKHGVVGF 163

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIR 241
              L   L   G  IT N+V PG + T +  
Sbjct: 164 TKALGLELARTG--ITVNAVCPGFVETPMAA 192

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 1e-17
 Identities = 43/215 (20%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   I+T A  GIG   A   A  G  V+    + +  ++     +++ P  +   ++ 
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD- 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
                 + +    ++  +  +L++L N AG    GT     + + +     N    +L+ 
Sbjct: 59  -----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              L  M          G IIN+SS    +               G      YS +K A 
Sbjct: 114 KAFLPKMLA-----QKSGNIINMSSVASSVK--------------GVVNRCVYSTTKAAV 154

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
           I     +A    + G  I  N V PG + T  ++ 
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQE 187

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 77.8 bits (191), Expect = 1e-17
 Identities = 42/213 (19%), Positives = 69/213 (32%), Gaps = 28/213 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T +VTGA SGIG     + A  G  +V   R+     +    +      A+  A+  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+S   +V    +E   +  +L+ + + AG+  +    +      +              
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT------ 112

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
                          G  +     G  L     +         G  G   Y+  KL  + 
Sbjct: 113 ---------------GSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVG 157

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            A  LA  L   G  +  N + PG I T +   
Sbjct: 158 LARTLALELARKG--VRVNVLLPGLIQTPMTAG 188

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.2 bits (189), Expect = 2e-17
 Identities = 27/215 (12%), Positives = 67/215 (31%), Gaps = 35/215 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
               +V G    +G+   +    R   V     D+   ++   +++ ++  +  +  +  
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQV 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK---DNIELQFATNHLGHFLLT 147
            + +  +        +   +++ ++  AG        SK    N +L +  +     + +
Sbjct: 60  TAEVGKL--------LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
           +L    +K+        G +    ++                   G  G   Y  +K A 
Sbjct: 112 HLATKHLKEG-------GLLTLAGAKAAL---------------DGTPGMIGYGMAKGAV 149

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                 LA +         A +V P  + T + R 
Sbjct: 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK 184

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 76.7 bits (188), Expect = 5e-17
 Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 32/217 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA  GIG E A  L  RG  V++   +     +  E +V  I         +
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACV 73

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFL 145
           + ++  +  +     E      +L+I+ +N+G++    +      E    F  N  G F 
Sbjct: 74  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF- 132

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAY-SQSK 204
                    ++  +     GR+I                   I   +      A  S SK
Sbjct: 133 ------FVAREAYKHLEIGGRLIL---------------MGSITGQAKAVPKHAVYSGSK 171

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A    A  +A  + +    IT N V PG I T++  
Sbjct: 172 GAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYH 206

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 75.6 bits (185), Expect = 8e-17
 Identities = 45/212 (21%), Positives = 69/212 (32%), Gaps = 25/212 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA  GIG   A  L   G  V +   + A  K V   I +        A+++D+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
               V     +        ++++NNAG         ++ + ++  +  N  G        
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILH 210
           ++  KK                        + I         G      YS SK A    
Sbjct: 121 VEAFKKEGH-------------------GGKIINACSQAGHVGNPELAVYSSSKFAVRGL 161

Query: 211 ANELARRLKEDGVDITANSVHPGAIATNIIRH 242
               AR L   G  IT N   PG + T +   
Sbjct: 162 TQTAARDLAPLG--ITVNGYCPGIVKTPMWAE 191

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.4 bits (182), Expect = 2e-16
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 33/212 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   A+ LA  G  V +  R   A K +               +E+
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEV 52

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D++   +V    +        + +L++NAG+    F++     + +   N          
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV- 111

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
                   + +    GR+I + S                           Y+ SK   I 
Sbjct: 112 --AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQA---------------NYAASKAGVIG 154

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A  +AR L +    +TAN V PG I T++ R
Sbjct: 155 MARSIARELSKAN--VTANVVAPGYIDTDMTR 184

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 5e-16
 Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 21/216 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           GL A++TG  SG+G  TA  L  +G   V+     + G+   + +      A  D     
Sbjct: 5   GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEK 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG---IMGTPFMLSKDNIELQFATNHLGHFLLT 147
               A          +        I  A     +      + ++ +     N +G F + 
Sbjct: 65  DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 124

Query: 148 NLLLDTMKKTARKSG-GEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
            L+   M +     G   G IIN +S                    G  G  AYS SK  
Sbjct: 125 RLVAGEMGQNEPDQGGQRGVIINTASVAAFE---------------GQVGQAAYSASKGG 169

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
            +     +AR L   G  I   ++ PG   T ++  
Sbjct: 170 IVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTS 203

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 71.3 bits (174), Expect = 3e-15
 Identities = 53/215 (24%), Positives = 80/215 (37%), Gaps = 27/215 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     +  E   ++     V+    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 62

Query: 90  DLSSLASVRNFASE-YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
           DL S            ++   +LNIL+NNAG++        ++ +  +   TN    + L
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 122

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLA 206
           +      +     K+   G +I +SS               I   S       YS SK A
Sbjct: 123 SQ-----IAYPLLKASQNGNVIFLSS---------------IAGFSALPSVSLYSASKGA 162

Query: 207 NILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
                  LA    +D  +I  NSV PG I T ++ 
Sbjct: 163 INQMTKSLACEWAKD--NIRVNSVAPGVILTPLVE 195

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 70.6 bits (172), Expect = 7e-15
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 34/217 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA++TG+  GIG   A      G  V +   ++ A +     I          A+ L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIAL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  AS+    +E   +   ++IL+NNA +        +++++ +  FA N  G     
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF-- 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS---QSK 204
                               +  +     +A   G +   +   +G  G         +K
Sbjct: 117 --------------------MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156

Query: 205 LANILHANELARRLKEDGVDITANSVHPGAIATNIIR 241
            A I         L   G  I  N++ PG +      
Sbjct: 157 AAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWD 191

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 68.8 bits (167), Expect = 3e-14
 Identities = 37/216 (17%), Positives = 64/216 (29%), Gaps = 22/216 (10%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA------ 86
            A++TG    IG   A  L  +G  VV+  R     +   + +V E+ +A+  +      
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH---SEGAAQRLVAELNAARAGSAVLCKG 59

Query: 87  -MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHL 141
            + L  S L    +          + ++L+NNA         P   +    + +     +
Sbjct: 60  DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV 119

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYS 201
                +N +       A                 R      +            GF  Y+
Sbjct: 120 AELFGSNAVAPLFLIRAF------ARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 173

Query: 202 QSKLANILHANELARRLKEDGVDITANSVHPGAIAT 237
            +K A        A  L      I  N+V PG    
Sbjct: 174 MAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLL 207

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 67.2 bits (163), Expect = 7e-14
 Identities = 29/213 (13%), Positives = 55/213 (25%), Gaps = 29/213 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IV G    +G+         G  V+    D++A       I+ +      +  + 
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQS 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
            L   AS         +Q  Q++ +   AG        SKD ++          +     
Sbjct: 59  ILEQTASS--------LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANIL 209
                            +    +          I                Y  +K A   
Sbjct: 111 AKLATTHLKPGG----LLQLTGAAAAMGPTPSMIG---------------YGMAKAAVHH 151

Query: 210 HANELARRLKEDGVDITANSVHPGAIATNIIRH 242
             + LA +      +    ++ P  + T + R 
Sbjct: 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 184

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 64.5 bits (156), Expect = 9e-13
 Identities = 31/228 (13%), Positives = 68/228 (29%), Gaps = 22/228 (9%)

Query: 30  SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           SG   +VTG  S   I    A+ +   G  +    ++      V+E             +
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVL 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           + D++  AS+    +E      + +  +++ G      +       +      + H + +
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
              +   K           ++ +S  G                      +     +K + 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAE---------------RAIPNYNVMGLAKASL 165

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHA 255
             +   +A  +  +G  +  N++  G I T        FR M     A
Sbjct: 166 EANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEA 211

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 62.9 bits (152), Expect = 3e-12
 Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 33/214 (15%)

Query: 27  IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           +D SG  A+V G T+   +G   A  L   G  V +  +      + ++       +   
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF 63

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNA------GIMGTPFMLSKDNIELQFAT 138
            A          +    +        L+ L++         + G      + +  L    
Sbjct: 64  RADVTQ---DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFR 198
           +      +       +++        G I+ ++                         + 
Sbjct: 121 SAYSLVAVARRAEPLLREG-------GGIVTLTYYASE---------------KVVPKYN 158

Query: 199 AYSQSKLANILHANELARRLKEDGVDITANSVHP 232
             + +K A       LA  L   GV + A S  P
Sbjct: 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGP 192

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.8 bits (152), Expect = 3e-12
 Identities = 34/215 (15%), Positives = 60/215 (27%), Gaps = 41/215 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V  A+ GIG   A VL+  G  V +  R+    K      V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 50

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLT 147
                  +R        +  +++IL+ NA     G    L+ ++ +    +  L      
Sbjct: 51  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI--- 102

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLAN 207
                             R    + +         I    +  P           +++A 
Sbjct: 103 ---------------KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS--ARMAL 145

Query: 208 ILHANELARRLKEDGVDITANSVHPGAIATNIIRH 242
                 L+  +   G  IT N V PG   T  ++ 
Sbjct: 146 TGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKE 178

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 52.6 bits (125), Expect = 1e-08
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 20/89 (22%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +++G  +GIG  T +VL   G  +V                      A+V A   DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIR----------------DAEVIA---DLST 44

Query: 94  LASVRNFASEYNIQHHQ-LNILINNAGIM 121
               +   ++   +  + ++ L+  AG+ 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 52.4 bits (124), Expect = 2e-08
 Identities = 19/141 (13%), Positives = 36/141 (25%), Gaps = 24/141 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPS----------- 81
           A+VTGA   +G   A  L   G  V +   R  A    +  T+    P+           
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 82  -----AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSK 129
                         ++         +       + ++L+NNA                  
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 130 DNIELQFATNHLGHFLLTNLL 150
              + +           +N +
Sbjct: 125 CVGDREAMETATADLFGSNAI 145

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 52.4 bits (125), Expect = 2e-08
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 21/216 (9%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TG    IG+   R +       V+ +  +    +  E++     S + +    D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
           A +         + +Q + +++ A         S         TN +G + L  +     
Sbjct: 63  AEITRI-----FEQYQPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYW 115

Query: 155 KKTARKSGGEGRIINVSSE------GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANI 208
                      R  ++S++       H       +      + + Y     YS SK ++ 
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 209 LHANELARRLKEDGVDITA----NSVHPGAIATNII 240
                  R     G+        N+  P      +I
Sbjct: 176 HLVRAWRR---TYGLPTIVTNCSNNYGPYHFPEKLI 208

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 33/205 (16%), Positives = 51/205 (24%), Gaps = 27/205 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T +VTG T G+G + AR LA RG   ++ V       D    +V E+ +           
Sbjct: 11  TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 70

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
                        I        + +A        +     E     +        NL   
Sbjct: 71  VTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHEL 130

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
           T +            +  SS                    G  G   Y+         A 
Sbjct: 131 TREL------DLTAFVLFSSFASAF---------------GAPGLGGYAPGNAYLDGLAQ 169

Query: 213 ELARRLKEDGVDITANSVHPGAIAT 237
           +           + A +V  G  A 
Sbjct: 170 QRRSD------GLPATAVAWGTWAG 188

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 27/195 (13%), Positives = 54/195 (27%), Gaps = 24/195 (12%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
           G    G  A+V   T  +G  +A +LA  G  VV+  R +   +   +++ K        
Sbjct: 18  GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 77

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFL 145
           A   D +S A                + +     I     +L +   + + +   +  + 
Sbjct: 78  AETADDASRAEA----------VKGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYN 125

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKL 205
               L         K    G+          L          +             +S  
Sbjct: 126 AQPPLGIGGIDATDK----GKEYGGKRAFGALG------IGGLKLKLHRACIAKLFESSE 175

Query: 206 A--NILHANELARRL 218
              +     +LA+ +
Sbjct: 176 GVFDAEEIYKLAKEM 190

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.7 bits (104), Expect = 3e-06
 Identities = 16/205 (7%), Positives = 48/205 (23%), Gaps = 23/205 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++ G    +G   A  LA  G  +V+G R     +       +    A +  M+ +  
Sbjct: 3   VALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE-- 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
                        +     + +     +          +  +  +    G    +     
Sbjct: 60  ---DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAA 116

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
            +     +S      ++                         +    +      +   + 
Sbjct: 117 EIVAEVLESEKVVSALHTIPAARFA---------------NLDEKFDWDVPVCGDDDESK 161

Query: 213 ELARRLKEDGVDITANSVHPGAIAT 237
           ++   L  +        +  G ++ 
Sbjct: 162 KVVMSLISEI--DGLRPLDAGPLSN 184

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 44.7 bits (104), Expect = 4e-06
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
          ID  G  A + G    +G G   A+ LA  G  +++G    A           +   ++V
Sbjct: 4  IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

Query: 85 DA 86
            
Sbjct: 64 LP 65

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 40/240 (16%), Positives = 79/240 (32%), Gaps = 24/240 (10%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           +VTG +  IG+ T   L   G H V+ + ++   K     +++ +       +E D+ + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
           A +     ++ I     + +I+ AG+       S       +  N  G    T  L+  M
Sbjct: 63  ALMTEILHDHAI-----DTVIHFAGLKAVG--ESVQKPLEYYDNNVNG----TLRLISAM 111

Query: 155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 214
           +    K       I  S       Y +  +   +           Y +SKL       +L
Sbjct: 112 RAANVK-----NFIFSS---SATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL 163

Query: 215 ARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLLKNVQQVILN 274
            +   +  + +       GA  +  +  +      N +    P IA   + +     I  
Sbjct: 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM----PYIAQVAVGRRDSLAIFG 219

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 44.3 bits (103), Expect = 7e-06
 Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 2/46 (4%)

Query: 30 SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           G   ++ G  +   I    A+    +G  +     + +  K V+ 
Sbjct: 4  KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 42.4 bits (98), Expect = 3e-05
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 30 SGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP 80
           G   +V+G    S I    ARV   +G  +V+   D      + + I   +P
Sbjct: 5  DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLP 54

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.7 bits (96), Expect = 5e-05
 Identities = 13/80 (16%), Positives = 25/80 (31%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTGA   + +     L   G  V    R  +   ++++    + P     A+  D
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 91  LSSLASVRNFASEYNIQHHQ 110
           +    +            H 
Sbjct: 71  MLKQGAYDEVIKGAAGVAHI 90

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 41.3 bits (95), Expect = 7e-05
 Identities = 11/91 (12%), Positives = 25/91 (27%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           + G T  IG          G    +  R        K  ++          +E  L    
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 96  SVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
            + +   + ++    L   + +  I+    +
Sbjct: 68  RLVDALKQVDVVISALAGGVLSHHILEQLKL 98

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 30/193 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--- 89
            A++TG T   G+  A  L  +G  V    R  ++    +   + + P        L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           DLS  +++     E           +++         +S ++ E     + +G    T  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVA-------VSFESPEYTADVDAMG----TLR 111

Query: 150 LLDTMKKTARKSGGEGRIINVSS-----EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSK 204
           LL+ ++    +     R    S+         +   E   F   +          Y+ +K
Sbjct: 112 LLEAIRFLGLEKK--TRFYQASTSELYGLVQEIPQKETTPFYPRS---------PYAVAK 160

Query: 205 LANILHANELARR 217
           L            
Sbjct: 161 LYAYWITVNYRES 173

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.9 bits (89), Expect = 4e-04
 Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 17/189 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTG    IG+ T   L   G   V    +++         ++ +    +   E+DL 
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
               +     EY I         + AG+               +  N LG  +L  L+  
Sbjct: 62  DRKGLEKVFKEYKIDSVI-----HFAGLKAVGESTQIPLR--YYHNNILGTVVLLELMQQ 114

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
                   S       + +   + +   E       N          Y  +K A     N
Sbjct: 115 YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN---------PYGHTKYAIENILN 165

Query: 213 ELARRLKED 221
           +L    K+ 
Sbjct: 166 DLYNSDKKS 174

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 5/69 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T  V GAT   G    RV A  G HV   V  +           +      V   +  L 
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLL 59

Query: 93  SLASVRNFA 101
           +   + +  
Sbjct: 60  NNVPLMDTL 68

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.0 bits (86), Expect = 0.001
 Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 2/87 (2%)

Query: 34  AIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
             + G     G G   A+ L+ R V ++ G+        +K     +  +  +   +  +
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 92  SSLASVRNFASEYNIQHHQLNILINNA 118
           + L  +   AS             N  
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKR 91

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD-VKETIVKEIPSAKVDAM 87
          GS    ++ GAT  IG   A+     G    + VR+  A  +  K  +++   ++  + +
Sbjct: 1  GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 88 ELDL 91
             +
Sbjct: 61 HGSI 64

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 12/182 (6%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           IVTG    IG+     +      V + V D       K  + + I   +V+ +  D++  
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADA 64

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
             V   A++ +   H        A         S ++      TN +G + L        
Sbjct: 65  ELVDKLAAKADAIVH-------YAAESHNDN--SLNDPSPFIHTNFIGTYTLLEAARKYD 115

Query: 155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANEL 214
            +    S  E        E      H     +K    + YN    YS +K A+ L     
Sbjct: 116 IRFHHVSTDEVYGDLPLREDL--PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAW 173

Query: 215 AR 216
            R
Sbjct: 174 VR 175

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 27/191 (14%), Positives = 57/191 (29%), Gaps = 21/191 (10%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG T   G   A++L  +G  V   V   ++    +  + +      +   + D++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMA 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
              SV+    +   Q        +  G      + +          + LG   L      
Sbjct: 60  DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTT-------GVVDGLGVTHLLE---- 108

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHAN 212
                 R+   E R    S+          I+ ++ ++ + +     Y  +KL       
Sbjct: 109 ----AIRQFSPETRFYQASTS----EMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160

Query: 213 ELARRLKEDGV 223
                      
Sbjct: 161 NYRESFGLHAS 171

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 26/183 (14%), Positives = 53/183 (28%), Gaps = 28/183 (15%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TG    +G+     L + G  V   V +   G+  K  +   I     + +  D+   
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVT-VVDNFFTGR--KRNVEHWIGHENFELINHDVVEP 61

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
             +            +++ + + A     P      N      TN +G    T  +L   
Sbjct: 62  LYI------------EVDQIYHLASPASPP--NYMYNPIKTLKTNTIG----TLNMLGLA 103

Query: 155 KKTARKSGGEGRIINVSS-EGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANE 213
           K+         R++  S+ E +          D     +       Y + K         
Sbjct: 104 KRVGA------RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA 157

Query: 214 LAR 216
             +
Sbjct: 158 YMK 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.98
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.98
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.97
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.97
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.93
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.87
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.76
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.76
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.75
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.72
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.72
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.68
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.68
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.68
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.64
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.53
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.4
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.39
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.35
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.19
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.18
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.15
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.98
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.98
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.77
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.29
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.14
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.13
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.07
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.07
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.0
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.98
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.96
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.92
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.88
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.88
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.74
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.73
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.7
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.7
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.69
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.63
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.63
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.59
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.58
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.57
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.56
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.54
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.54
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.51
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.5
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.49
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.38
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.37
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.36
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.34
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.3
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.28
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.26
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.23
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.19
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.18
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.18
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.18
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.15
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.14
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.11
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.1
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.08
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.08
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.05
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.04
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.01
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.01
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.99
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.98
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.89
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.83
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.83
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.81
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.77
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.77
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.69
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.69
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.68
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.66
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.6
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.55
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.52
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.38
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.37
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.33
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.3
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.28
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.27
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.25
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.24
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.23
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.21
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.95
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.82
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.75
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.61
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.47
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.47
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.37
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.32
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.31
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.26
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.26
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.2
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.18
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.16
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.09
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.08
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.07
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.06
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.98
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.94
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.88
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.88
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.87
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.85
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.75
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.61
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.59
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.56
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.51
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.45
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.4
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.36
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.36
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.3
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.26
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.23
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.2
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.13
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	94.1
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.02
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.98
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.93
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.87
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.83
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.8
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.8
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.8
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.77
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.77
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.61
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.59
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.54
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.49
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.42
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.4
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.37
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.32
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.32
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.26
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.21
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.14
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.86
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.81
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	92.75
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.74
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.73
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.5
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.49
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.47
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.42
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.41
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.21
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.12
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.08
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.65
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.17
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.14
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.09
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.05
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	90.95
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.78
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	90.69
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.67
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.65
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.6
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	90.27
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.21
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.18
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.84
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.82
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.82
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	89.64
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	89.42
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	89.3
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.27
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.97
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.96
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.8
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.79
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	88.74
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.7
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	88.24
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.89
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.73
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.67
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.59
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.54
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.41
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.25
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.14
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	86.77
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	86.65
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.61
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.47
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.01
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.83
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	85.75
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.66
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.61
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	85.56
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	85.53
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.52
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	85.45
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.45
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.05
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	84.91
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.77
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	84.7
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	84.66
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	84.58
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	84.21
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.08
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.93
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.74
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.67
d2h00a1	250	Methyltransferase 10 domain containing protein MET	83.16
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.16
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.14
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.97
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	82.93
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	82.9
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.72
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	82.54
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	82.42
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.32
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.82
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.77
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	81.49
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.25
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.13
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	81.04
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	80.81
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.7
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	80.67
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.51
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	80.48
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.41
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	80.32
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.31
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	80.25
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.22
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.19
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.15
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.15
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.08

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8e-45  Score=310.21  Aligned_cols=222  Identities=27%  Similarity=0.342  Sum_probs=192.6

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++|+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.  +.++.++++|++++++++++++++
T Consensus         5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_           5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999999875  557999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          105 NIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .+++|++|++|||||.... +.+.+.++|++++++|+.++++++|+++|+|.++     ++++||++||.++..      
T Consensus        83 ~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Ii~isS~~~~~------  151 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAEN------  151 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTC------
T ss_pred             HHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-----cccccccccccchhc------
Confidence            9999999999999997643 5578999999999999999999999999999987     578999999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhh
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKC  263 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~  263 (282)
                               +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++.+..............+|    ..
T Consensus       152 ---------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~p----l~  216 (255)
T d1fmca_         152 ---------KNINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTP----IR  216 (255)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS----SC
T ss_pred             ---------cccccccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCC----CC
Confidence                     578899999999999999999999999999  999999999999999876533333333333322    12


Q ss_pred             cccChHHHHhh
Q 023438          264 LLKNVQQVILN  274 (282)
Q Consensus       264 ~~~~~~~~~~~  274 (282)
                      ....|++.++.
T Consensus       217 R~g~pedvA~~  227 (255)
T d1fmca_         217 RLGQPQDIANA  227 (255)
T ss_dssp             SCBCHHHHHHH
T ss_pred             CCcCHHHHHHH
Confidence            23456666654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.5e-44  Score=306.98  Aligned_cols=194  Identities=28%  Similarity=0.300  Sum_probs=179.8

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999998776  5688999999999999999999998


Q ss_pred             hcCC-CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQHH-QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~g-~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++++ ++|++|||||...  ++.+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||..+..     
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-----  150 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGAL-----  150 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTS-----
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-----ccccccccccccccc-----
Confidence            8886 7999999999753  46789999999999999999999999999999986     679999999988876     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       151 ----------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  199 (259)
T d2ae2a_         151 ----------AVPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMT  199 (259)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHH
T ss_pred             ----------ccccccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhh
Confidence                      578899999999999999999999999999  9999999999999997643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.4e-44  Score=306.81  Aligned_cols=193  Identities=24%  Similarity=0.326  Sum_probs=180.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..++.++.++++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999988877778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +|++|+||||||+..   ++.+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||.++..       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-------  148 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIR-------  148 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTS-------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-----cCCCCcccccHhhcc-------
Confidence            999999999999653   35678999999999999999999999999999986     689999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+.
T Consensus       149 --------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         149 --------GIGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVEN  196 (258)
T ss_dssp             --------BCSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHH
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHH
Confidence                    588899999999999999999999999999  999999999999998764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.5e-44  Score=303.93  Aligned_cols=220  Identities=28%  Similarity=0.322  Sum_probs=187.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+.++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999998765  5579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|++|||||...  +..+.+.++|++++++|+.++++++|+++|+|+++     +.|+||++||.++..      
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~------  151 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLT------  151 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH------
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-----CCeEEEEECCHHhcC------
Confidence            99999999999999753  36788999999999999999999999999999987     579999999999887      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhh
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKC  263 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~  263 (282)
                               +.++..+|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.+.... ...+.....+|    ..
T Consensus       152 ---------~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~-~~~~~~~~~~p----l~  215 (251)
T d2c07a1         152 ---------GNVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISE-QIKKNIISNIP----AG  215 (251)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCH-HHHHHHHTTCT----TS
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCH-HHHHHHHhcCC----CC
Confidence                     588899999999999999999999999999  999999999999999876532 22233333322    12


Q ss_pred             cccChHHHHhh
Q 023438          264 LLKNVQQVILN  274 (282)
Q Consensus       264 ~~~~~~~~~~~  274 (282)
                      .+..|++.++.
T Consensus       216 R~~~pedvA~~  226 (251)
T d2c07a1         216 RMGTPEEVANL  226 (251)
T ss_dssp             SCBCHHHHHHH
T ss_pred             CCcCHHHHHHH
Confidence            23456666654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.5e-44  Score=304.34  Aligned_cols=195  Identities=22%  Similarity=0.317  Sum_probs=178.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ +.++.++++|++++++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999987766 45789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||+.  .+..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||+++|..+...      
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~i~S~~~~~~------  148 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEV------  148 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCC------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----ccccccccccchhccc------
Confidence            999999999999975  346789999999999999999999999999999885     5789999999765432      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++.+..
T Consensus       149 --------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~~  197 (251)
T d1vl8a_         149 --------TMPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAV  197 (251)
T ss_dssp             --------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHH
T ss_pred             --------cCccccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHhc
Confidence                    567788999999999999999999999999  9999999999999998753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.5e-44  Score=302.94  Aligned_cols=190  Identities=29%  Similarity=0.418  Sum_probs=176.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++.++.+|++++++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            589999999999999999999999999999999999999888887776     346888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||.++..        
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~--------  142 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-----RHGRIITIGSVVGTM--------  142 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHH--------
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-----CCCEeeeecchhhcC--------
Confidence            999999999999753  46789999999999999999999999999999986     579999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                             +.++.++|++||+|+++|+++|+.|++++|  ||||+|+||+++||+.+...
T Consensus       143 -------~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~  192 (243)
T d1q7ba_         143 -------GNGGQANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALS  192 (243)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSC
T ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhh
Confidence                   578899999999999999999999999999  99999999999999987653

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-43  Score=303.29  Aligned_cols=195  Identities=26%  Similarity=0.246  Sum_probs=165.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++.+|++++++++++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999998776  4579999999999999999999999


Q ss_pred             hcC-CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~-g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++ |++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||..+..     
T Consensus        81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~-----  150 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVV-----  150 (259)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC-----------
T ss_pred             HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-----ccccccccccccccc-----
Confidence            887 78999999999753  46789999999999999999999999999999986     579999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+...
T Consensus       151 ----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~  200 (259)
T d1xq1a_         151 ----------SASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVY  200 (259)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC--------
T ss_pred             ----------cccccccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhc
Confidence                      577889999999999999999999999999  99999999999999987643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.7e-43  Score=300.68  Aligned_cols=191  Identities=28%  Similarity=0.385  Sum_probs=165.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|+||++|||||++|||+++|++|+++|++|++++|+...  +..+.+.+ . +.++.++++|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~-~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRN-L-GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHH-T-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHH-c-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999998653  22223333 3 568999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||+..  ++.+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.++..        
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~--------  144 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWL--------  144 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGS--------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----CCCCccccccchhcc--------
Confidence            999999999999753  46789999999999999999999999999999987     579999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                             +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.+...
T Consensus       145 -------~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~  194 (247)
T d2ew8a1         145 -------KIEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASA  194 (247)
T ss_dssp             -------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC---------
T ss_pred             -------cCcccccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCccccccc
Confidence                   688899999999999999999999999999  99999999999999987653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3e-43  Score=301.51  Aligned_cols=192  Identities=31%  Similarity=0.333  Sum_probs=171.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+.+ +.++.++++|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999997 456677777776654 457999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|+||||||+..  ++.+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.++..        
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~--------  147 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLV--------  147 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----CCceEeeccccccee--------
Confidence            999999999999753  46789999999999999999999999999999987     578999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       148 -------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         148 -------ASANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------
T ss_pred             -------ccCCcchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhh
Confidence                   588899999999999999999999999999  9999999999999997653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.7e-43  Score=299.78  Aligned_cols=189  Identities=27%  Similarity=0.356  Sum_probs=174.8

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998887777665     346889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||..+..        
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~--------  144 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLA--------  144 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-----CcceEEecccccccc--------
Confidence            999999999999753  47789999999999999999999999999999987     579999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       145 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  193 (244)
T d1nffa_         145 -------GTVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWV  193 (244)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTS
T ss_pred             -------ccccccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhh
Confidence                   688899999999999999999999999999  9999999999999997654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5e-43  Score=299.31  Aligned_cols=190  Identities=24%  Similarity=0.364  Sum_probs=174.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |.++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888877776     55789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|++.++.    ++|+||++||.++..       
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~----~~g~Iv~isS~~~~~-------  144 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG----RGGKIINMASQAGRR-------  144 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTS-------
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc----cCCccccccchhhcc-------
Confidence            9999999999999753  467889999999999999999999999999877651    468999999988776       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++.+.|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+++.
T Consensus       145 --------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~  192 (256)
T d1k2wa_         145 --------GEALVGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDG  192 (256)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHH
T ss_pred             --------ccccccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhh
Confidence                    688899999999999999999999999999  999999999999999764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.6e-43  Score=301.68  Aligned_cols=189  Identities=27%  Similarity=0.302  Sum_probs=174.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998877766655     457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.++..        
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-----~~G~II~isS~~~~~--------  143 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLM--------  143 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS--------
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-----CCCeecccccchhcc--------
Confidence            999999999999753  36788999999999999999999999999999987     579999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.++..+|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....
T Consensus       144 -------~~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~  192 (254)
T d1hdca_         144 -------GLALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHH
T ss_pred             -------cccchhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhc
Confidence                   578899999999999999999999999999  9999999999999987653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5.1e-43  Score=299.53  Aligned_cols=189  Identities=30%  Similarity=0.395  Sum_probs=174.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++++|++|+++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999998765  55799999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHH--HHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       110 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      ++|++|||||+..  ++.+.+.++|++.+++|+.++++++|+++|+  +.++     +.++||+++|..+..        
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-----~~g~Ii~i~S~~~~~--------  145 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQ--------  145 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-----TEEEEEEECCGGGTS--------
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-----CCccccccccccccc--------
Confidence            9999999999753  4678999999999999999999999999997  4444     468999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|||.+.
T Consensus       146 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~  193 (257)
T d2rhca1         146 -------GVVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAAS  193 (257)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHH
T ss_pred             -------ccccchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHH
Confidence                   688899999999999999999999999999  999999999999999764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=9.1e-43  Score=298.37  Aligned_cols=191  Identities=24%  Similarity=0.266  Sum_probs=178.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999888765  567999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +|++|++|||||...   ++.+.+.++|++.+++|+.++++++|+++|+|.++     +.|+||++||.++..       
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~-------  147 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVK-------  147 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHS-------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-----cCCCCCeeechhhcc-------
Confidence            999999999999653   36789999999999999999999999999999986     679999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||+|+|+++..
T Consensus       148 --------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~  195 (260)
T d1zema1         148 --------GPPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWE  195 (260)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHH
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchhh
Confidence                    578899999999999999999999999999  999999999999998653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.2e-43  Score=300.92  Aligned_cols=189  Identities=27%  Similarity=0.321  Sum_probs=173.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.+..++++|++++++++++++.+.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999888877776     457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  ++.+.+.++|++.+++|+.++++++|+++|+|++      ++|+||++||.++..        
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~------~~G~Iv~isS~~~~~--------  143 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE------TGGSIINMASVSSWL--------  143 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT------TCEEEEEECCGGGTS--------
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh------cCCceecccchhhhc--------
Confidence            999999999999754  3678899999999999999999999999999976      369999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++..+|+++|+|+.+|+++++.|+++.|.+||||+|+||+++||+++.
T Consensus       144 -------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~  193 (253)
T d1hxha_         144 -------PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             -------CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh
Confidence                   68889999999999999999999999885445999999999999998754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=3.8e-43  Score=297.22  Aligned_cols=189  Identities=24%  Similarity=0.346  Sum_probs=175.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCE-------EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~-------Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999997       999999999999999988765  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+++|++|++|||||..  .++.+.+.++|++++++|+.++++++|+++|+|+++     ++|+||++||.++..     
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~-----  149 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATK-----  149 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS-----
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-----CCCceEEEechhhcC-----
Confidence            99999999999999975  346789999999999999999999999999999986     579999999988876     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                +.++++.|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|||++...
T Consensus       150 ----------~~~~~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~  199 (240)
T d2bd0a1         150 ----------AFRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVD  199 (240)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCC
T ss_pred             ----------CCCCChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcC
Confidence                      688999999999999999999999999999  99999999999999987653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-42  Score=293.80  Aligned_cols=188  Identities=24%  Similarity=0.315  Sum_probs=168.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++       ++.+++||++|+++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988877665433       467899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||+..  ++.+.+.++|++.+++|+.++++++|+++|+|+++     +.+.++++||. +..       
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~~~i~~~ss~-~~~-------  140 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASR-VYL-------  140 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCG-GGG-------
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-----ccceeeeeccc-ccc-------
Confidence            9999999999999753  46789999999999999999999999999999885     45667776664 333       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                              +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++.+...
T Consensus       141 --------~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~  190 (242)
T d1ulsa_         141 --------GNLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVP  190 (242)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSC
T ss_pred             --------CCCCCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCC
Confidence                    578889999999999999999999999999  99999999999999987653

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.9e-43  Score=299.06  Aligned_cols=194  Identities=27%  Similarity=0.341  Sum_probs=174.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++...+++.+.  +.++.++++|++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999854 566677777654  5589999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|.++    +.+++|+++||.++..      
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~g~~Iv~isS~~~~~------  150 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN----DIKGTVINMSSVHEKI------  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TCCCEEEEECCGGGTS------
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc----cccccccccccchhcc------
Confidence            99999999999999754  36789999999999999999999999999999885    1345699999988776      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+....
T Consensus       151 ---------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~  199 (261)
T d1geea_         151 ---------PWPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEK  199 (261)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHH
T ss_pred             ---------cCccccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhh
Confidence                     688899999999999999999999999999  9999999999999997643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=295.71  Aligned_cols=186  Identities=26%  Similarity=0.356  Sum_probs=169.9

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++      .++.++.+|++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999999999988766655442      35789999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      +|++|++|||||...   ++.+.+.++|++.+++|+.++++++|+++|+|+++      +|+||++||.++..       
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~-------  143 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAI-------  143 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHH-------
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCcccccccccc-------
Confidence            999999999999643   25678999999999999999999999999999874      68999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+|+||+.+.
T Consensus       144 --------~~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         144 --------GQAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHH
T ss_pred             --------cccCcchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHH
Confidence                    578899999999999999999999999999  999999999999998764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.9e-42  Score=294.42  Aligned_cols=189  Identities=26%  Similarity=0.322  Sum_probs=174.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++.+++|++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            68899999999999999999999999999999999999999998775  5579999999999999999999999999999


Q ss_pred             cEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      |++|||||+..  ++.+.+.++|++++++|+.++++++|+++|+|.++    ++.++|+++||.++..            
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~------------  143 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE----GHGGKIINACSQAGHV------------  143 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTS------------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhh----ccccccccccchhhcc------------
Confidence            99999999753  36789999999999999999999999999998876    2457899999988776            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++.+.|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||++...
T Consensus       144 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  192 (255)
T d1gega_         144 ---GNPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEI  192 (255)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHH
T ss_pred             ---cCcccccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhhh
Confidence               688899999999999999999999999999  9999999999999997653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.9e-42  Score=294.81  Aligned_cols=193  Identities=27%  Similarity=0.309  Sum_probs=174.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   +.++.++++|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999999988888877643   347999999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||..  .++.+.+.++|++.+++|+.++++++|+++|+|+++    +.+++||++||..+..        
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~----~~gg~Ii~isS~~~~~--------  147 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK----GLGASIINMSSIEGFV--------  147 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS----SSCEEEEEECCGGGTS--------
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc----CCCCceEeeeccceec--------
Confidence            99999999999975  347789999999999999999999999999999885    1245899999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccccCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARR--LKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e--~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                             +.++...|+++|+|+.+|+++++.|  ++++|  ||||+|+||+++||+.+...
T Consensus       148 -------~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~  199 (251)
T d1zk4a1         148 -------GDPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLP  199 (251)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTST
T ss_pred             -------cCCCchhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcC
Confidence                   5788999999999999999999998  45778  99999999999999987654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.3e-42  Score=294.32  Aligned_cols=193  Identities=26%  Similarity=0.286  Sum_probs=167.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.. +..++.++++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999987753 235699999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc-cccc
Q 023438          107 QHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~-~~~~  179 (282)
                      ++|++|++|||||...      ...+.+.++|++.+++|+.++++++|+++|+|+++      ++.+|+++|..+ ..  
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~--  153 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH--  153 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS--
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeeccccc--
Confidence            9999999999999642      23456889999999999999999999999999885      567777777553 33  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++.+..
T Consensus       154 -------------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~  202 (264)
T d1spxa_         154 -------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAM  202 (264)
T ss_dssp             -------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC----
T ss_pred             -------------cCCCchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhcc
Confidence                         678889999999999999999999999999  9999999999999997654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-42  Score=291.81  Aligned_cols=195  Identities=25%  Similarity=0.312  Sum_probs=177.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+++||++||||||+|||+++|++|++.|++|++++|+.++++++.+++.+.  +.++.++.||++|+++++++++.+.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998765  55899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||...  ...+.+.++|++++++|+.++++++++++|+|+++     +.|+||++||.++..       
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~G~Iv~isS~~~~~-------  148 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHV-------  148 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CC-------
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-----CCceEEEeecchhcC-------
Confidence            9999999999999753  46778889999999999999999999999999986     578999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCC-CcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDG-VDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g-~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++++.|++||+|+.+|+++|+.|+++++ .+|+||+|+||+|+|++.+..
T Consensus       149 --------~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~  200 (244)
T d1yb1a_         149 --------SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP  200 (244)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT
T ss_pred             --------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc
Confidence                    678899999999999999999999997742 129999999999999998764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.7e-42  Score=291.78  Aligned_cols=189  Identities=28%  Similarity=0.328  Sum_probs=173.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++|||||++|||+++|++|+++|++|++.+ |+.+.+++..+++.+.  +.++.++++|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999875 6677777777777665  568999999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       111 id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +|++|||||...  ++.+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||.++..           
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~-----------  143 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLI-----------  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHH-----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-----CCcEEEEEcChhhcC-----------
Confidence            999999999753  46789999999999999999999999999999986     679999999998887           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                          +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+...
T Consensus       144 ----~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~  193 (244)
T d1edoa_         144 ----GNIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLG  193 (244)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTC
T ss_pred             ----CCCCCHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhh
Confidence                588899999999999999999999999999  99999999999999987653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.9e-42  Score=293.01  Aligned_cols=185  Identities=27%  Similarity=0.304  Sum_probs=167.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.. +..+++       +..++++|++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-------GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999997653 333332       3567899999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||...  ++.+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||+++|..+..        
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Ii~isS~~~~~--------  140 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLF--------  140 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTS--------
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-----ccccccccccccccc--------
Confidence            999999999999754  47789999999999999999999999999999986     578999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                             +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+.
T Consensus       141 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~  188 (248)
T d2d1ya1         141 -------AEQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLE  188 (248)
T ss_dssp             -------BCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHH
T ss_pred             -------cccccchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHH
Confidence                   588899999999999999999999999999  999999999999998654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=9.5e-42  Score=293.34  Aligned_cols=192  Identities=24%  Similarity=0.329  Sum_probs=172.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..   ...+.++.+|++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999888888744   235888999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          108 HHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +|++|++|||||....    ..+.+.++|++++++|+.++++++|+++|+|.++     +.|+||+++|..+..+     
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~ii~iss~~~~~~-----  149 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFTA-----  149 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTCC-----
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-----CCCCcccccccccccc-----
Confidence            9999999999997532    4678899999999999999999999999999986     5789999999887652     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                               +.+....|+++|+|+++|+++|+.|++++|  ||||+|+||+++||+....
T Consensus       150 ---------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  198 (268)
T d2bgka1         150 ---------GEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV  198 (268)
T ss_dssp             ---------CTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTS
T ss_pred             ---------ccccccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhh
Confidence                     223345799999999999999999999999  9999999999999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.4e-42  Score=294.58  Aligned_cols=193  Identities=24%  Similarity=0.259  Sum_probs=172.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.. .+.++.++++|++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999987653 235799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC-cccccc
Q 023438          107 QHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE-GHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~-~~~~~~  179 (282)
                      ++|++|++|||||...+      ..+.+.++|++.+++|+.+++.++|+++|+|+++      ++.+|+++|. ++..  
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~--  153 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQ--  153 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSS--
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhcccc--
Confidence            99999999999997532      2356777899999999999999999999999875      4666666664 4444  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+|+|++.+..
T Consensus       154 -------------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  202 (272)
T d1xkqa_         154 -------------AQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAM  202 (272)
T ss_dssp             -------------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHT
T ss_pred             -------------CCCCcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhcc
Confidence                         678899999999999999999999999999  9999999999999997754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4e-42  Score=290.27  Aligned_cols=183  Identities=26%  Similarity=0.335  Sum_probs=163.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999998654             34578899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||+..  ++.+.+.++|++++++|+.++++++|+++|+|+++     +.++||++||.++..       
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Iv~isS~~~~~-------  137 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLW-------  137 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC---------
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----CCCceEEEcchhhcc-------
Confidence            9999999999999753  36788999999999999999999999999999986     578999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                              +.++...|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.+...
T Consensus       138 --------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~  187 (237)
T d1uzma1         138 --------GIGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALD  187 (237)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSC
T ss_pred             --------CCcccHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccC
Confidence                    578899999999999999999999999999  99999999999999987653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.9e-41  Score=288.55  Aligned_cols=194  Identities=26%  Similarity=0.286  Sum_probs=174.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +..+.++.+|++++++++++++++.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999888776  5578899999999999999999999


Q ss_pred             hcC-CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          106 IQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       106 ~~~-g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      +++ +.+|++|||||...  +..+.+.++|++++++|+.++++++++++|+|.++     ..|+||++||..+..     
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-----~~g~ii~isS~~~~~-----  148 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFS-----  148 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTS-----
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-----ccccccccccccccc-----
Confidence            988 68999999999754  46788999999999999999999999999999987     689999999988876     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.+++..|+++|+|+++|++.|+.|++++|  ||||+|+||+++||+.+..
T Consensus       149 ----------~~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~  197 (258)
T d1ae1a_         149 ----------ALPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETA  197 (258)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------
T ss_pred             ----------ccccchhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhh
Confidence                      688999999999999999999999999999  9999999999999997654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=9.6e-42  Score=294.11  Aligned_cols=194  Identities=24%  Similarity=0.275  Sum_probs=174.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.. +..++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999987753 235789999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--C--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          107 QHHQLNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ++|++|++|||||...  .  ..+.+.++|++.+++|+.++++++|+++|+|+++     ++++|+++||.++..     
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~ii~~ss~~~~~-----  150 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----KGEIVNVSSIVAGPQ-----  150 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEECCGGGSSS-----
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-----ccccccchhhhhccc-----
Confidence            9999999999999642  2  2446789999999999999999999999999985     567888887766654     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.+++..|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+....
T Consensus       151 ----------~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~  199 (274)
T d1xhla_         151 ----------AHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAM  199 (274)
T ss_dssp             ----------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHT
T ss_pred             ----------cCCCCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhh
Confidence                      578889999999999999999999999999  9999999999999987654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=9e-42  Score=292.22  Aligned_cols=206  Identities=25%  Similarity=0.282  Sum_probs=179.6

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .+.++++||++|||||++|||+++|++|+++|++|++++|+.+.+.+..+++.+.+ +.++.++++|+++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999998887765 45799999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC
Q 023438          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~  181 (282)
                      +.+++|++|++|||||...  +..+.+.++|++.+++|+.++++++|++.|+|.++    +..++|++++|.........
T Consensus        81 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~~~g~i~~~~s~~~~~~~~~  156 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQS  156 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEE
T ss_pred             HHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc----ccceEEEEeecccccccccc
Confidence            9999999999999999753  46789999999999999999999999999998765    24677888887655432110


Q ss_pred             CccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          182 GIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                              ...+.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++.....
T Consensus       157 --------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~  209 (260)
T d1h5qa_         157 --------SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMD  209 (260)
T ss_dssp             --------ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSC
T ss_pred             --------ccccCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccC
Confidence                    011345678999999999999999999999999  99999999999999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-41  Score=289.22  Aligned_cols=190  Identities=29%  Similarity=0.364  Sum_probs=173.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+++.++.++++|++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999999887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      |++|++|||||..      ..++|++.+++|+.+++.++++++|+|.++..  +.+|+||++||.++..           
T Consensus        81 G~iDilVnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~~~g~Iv~isS~~~~~-----------  141 (254)
T d2gdza1          81 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLM-----------  141 (254)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTS-----------
T ss_pred             CCcCeeccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHhhc--CCCcEEEeeccHhhcc-----------
Confidence            9999999999974      33568899999999999999999999987521  2458999999988876           


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHH--HHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANE--LARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~--la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                          +.+++++|++||+|+.+|+++  |+.|++++|  ||||+|+||+|+|||++..
T Consensus       142 ----~~~~~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~  192 (254)
T d2gdza1         142 ----PVAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESI  192 (254)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGG
T ss_pred             ----CCCCccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhc
Confidence                688899999999999999997  788999999  9999999999999998754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=289.95  Aligned_cols=193  Identities=23%  Similarity=0.303  Sum_probs=175.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC---CCceeEEEccCCCHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.++   +.++.++++|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999987543   457999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      .+++|++|++|||||..  .+..+.+.++|++.+++|+.++++++|+++|+|.++     +.++||++||... .     
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~Ii~~ss~~~-~-----  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPTK-A-----  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCCT-T-----
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----ccccccccccccc-c-----
Confidence            99999999999999964  346788999999999999999999999999999986     5788888876432 2     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|+++|+|+.+|+++++.|++++|  ||||+|+||+|+|++....
T Consensus       158 ----------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  206 (297)
T d1yxma1         158 ----------GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVEN  206 (297)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTT
T ss_pred             ----------cccccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhh
Confidence                      477889999999999999999999999999  9999999999999987543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-40  Score=282.20  Aligned_cols=186  Identities=25%  Similarity=0.362  Sum_probs=164.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++      .++.++.+|++|+++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH----
Confidence            5789999999999999999999999999999999999988766655543      257889999999998876654    


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|+||||||...  ++.+.+.++|++.+++|+.++++++|+++|++.++    +.+|+||+++|..+..       
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~-------  139 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHV-------  139 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS-------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh----cccCcccccchhhccc-------
Confidence            5789999999999753  46789999999999999999999999999987654    1468999999987765       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       140 --------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~  188 (242)
T d1cyda_         140 --------TFPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKV  188 (242)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHH
T ss_pred             --------cCCccccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhh
Confidence                    688899999999999999999999999999  9999999999999987653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=284.01  Aligned_cols=197  Identities=26%  Similarity=0.286  Sum_probs=177.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.....++.+++||++++++++++++.+.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999987656689999999999999999999999999


Q ss_pred             CCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |++|++|||||..  .+..+.+.++|++.+++|+.++++++++++|++++...   .+|+||++||.++...        
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~---~~g~Ii~isS~~~~~~--------  156 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV--------  156 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC--------
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc---CCCceEEEechHhcCC--------
Confidence            9999999999975  34778999999999999999999999999999987521   3689999999877542        


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRL--KEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~--~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                           .|.+....|+++|+|+.+|+++|+.|+  ++.|  ||||+|+||.++|++....
T Consensus       157 -----~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~--I~vn~i~PG~i~t~~~~~~  208 (257)
T d1xg5a_         157 -----LPLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKL  208 (257)
T ss_dssp             -----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHH
T ss_pred             -----CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCC--EEEEEEeCCCCCChhhhhc
Confidence                 135567789999999999999999999  5667  9999999999999986643

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-41  Score=283.29  Aligned_cols=188  Identities=22%  Similarity=0.277  Sum_probs=166.7

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      |++.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++      ..+.++.+|++|+++++++++  
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~--   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG--   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH--
Confidence            567899999999999999999999999999999999999988877665543      257889999999998877664  


Q ss_pred             HhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                        ++|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|++.++    ++.|+||++||.++..     
T Consensus        73 --~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~Ii~isS~~~~~-----  141 (244)
T d1pr9a_          73 --SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQR-----  141 (244)
T ss_dssp             --TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTS-----
T ss_pred             --HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh----CCcceEeecccccccc-----
Confidence              5789999999999753  46788999999999999999999999999986654    1468999999988776     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++...|++||+|+++|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       142 ----------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~  190 (244)
T d1pr9a_         142 ----------AVTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQAT  190 (244)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTT
T ss_pred             ----------cccchhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhh
Confidence                      578899999999999999999999999999  9999999999999997654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=9.8e-41  Score=284.59  Aligned_cols=192  Identities=26%  Similarity=0.323  Sum_probs=170.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC-CHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~~i~~~~~~i~  105 (282)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+..+. .+++....++.++.++.+|++ +.++++++++.+.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999888776544 455666666778999999998 6678999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +++|++|+||||||..      +.++|++++++|+.++++++++++|+|.++.  .+++++||++||..+..        
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~~~~g~Ii~isS~~~~~--------  143 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFN--------  143 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTS--------
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcc--cCCCceEEEEechhhcc--------
Confidence            9999999999999953      5678999999999999999999999998752  23468999999988876        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                             +.+++.+|++||+|+.+|+++|+.|+.++|  ||||+|+||+|+||+.+...
T Consensus       144 -------~~~~~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~  193 (254)
T d1sbya1         144 -------AIHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFN  193 (254)
T ss_dssp             -------CCTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCC
T ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccc
Confidence                   688899999999999999999999999999  99999999999999876543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3.4e-40  Score=284.64  Aligned_cols=188  Identities=21%  Similarity=0.233  Sum_probs=167.4

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999998887766655     45799999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      ++|++|++|||||+...       ..+.+.++|++.+++|+.++++++|+++|+|+++      +|++|+++|..+..  
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~--  147 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFY--  147 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTS--
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhcc--
Confidence            99999999999997532       1233445799999999999999999999999885      58999999987766  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.++.+.|+++|+|+.+|+++|+.|+++ +  ||||+|+||+|+|++....
T Consensus       148 -------------~~~~~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~  195 (276)
T d1bdba_         148 -------------PNGGGPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPS  195 (276)
T ss_dssp             -------------TTSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCG
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCcc
Confidence                         5788999999999999999999999985 5  9999999999999987543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.8e-40  Score=282.82  Aligned_cols=193  Identities=24%  Similarity=0.287  Sum_probs=173.2

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHH---cCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~---~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .|+||+++|||||+|||+++|++|++   +|++|++++|+.+.++++.+++....++.++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999986   799999999999999999999998887888999999999999999999998


Q ss_pred             Hh----cCCCccEEEEcCCCCCC-----CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcc
Q 023438          105 NI----QHHQLNILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (282)
Q Consensus       105 ~~----~~g~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~  175 (282)
                      .+    .++.+|++|+|||...+     ..+.+.++|++++++|+.++++++|+++|+|+++.   +..++||++||.++
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGG
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCcccccccccccc
Confidence            76    34688999999996432     45788899999999999999999999999998741   12579999999888


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..               +.+++..|++||+|+.+|+++|+.|  ..|  ||||+|+||+|+|+|.+.
T Consensus       160 ~~---------------~~~~~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~  207 (259)
T d1oaaa_         160 LQ---------------PYKGWGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             TS---------------CCTTCHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHH
T ss_pred             cC---------------CCccchHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHH
Confidence            76               6889999999999999999999998  457  999999999999998764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.6e-40  Score=282.97  Aligned_cols=190  Identities=25%  Similarity=0.339  Sum_probs=168.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE-cChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~-r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +|+||+||||||++|||+++|++|++.|++|++.+ |+.+.+++..+++.+.  +.++.++++|++|+++++.+++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999875 5555567777777654  55899999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      ++|++|++|||||...  +..+.+.++|++.+++|+.++++++|+++|+|++       ++++++++|..+...      
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~------  147 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT------  147 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC------
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCccccccccccccc------
Confidence            9999999999999753  3667899999999999999999999999999965       467888877655442      


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++.+.
T Consensus       148 --------~~~~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~  195 (259)
T d1ja9a_         148 --------GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDE  195 (259)
T ss_dssp             --------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhh
Confidence                    578899999999999999999999999999  999999999999998754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=5.1e-40  Score=278.08  Aligned_cols=212  Identities=24%  Similarity=0.254  Sum_probs=173.5

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++.+.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999988766555443     457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCC--CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       108 ~g~id~vi~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +|++|++|||||..  .++.+.+.++|++++++|+.+++.++|+++|++.+       .+.++++||.+..         
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~---------  140 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGL---------  140 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTC---------
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeeccccccc---------
Confidence            99999999999965  34678999999999999999999999999998865       3567777765543         


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhhcc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKCLL  265 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~  265 (282)
                             +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++.+.... ..........|    ....
T Consensus       141 -------~~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~p----~~r~  206 (241)
T d2a4ka1         141 -------GAFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPP-WAWEQEVGASP----LGRA  206 (241)
T ss_dssp             -------CHHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCH-HHHHHHHHTST----TCSC
T ss_pred             -------cccCccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhH-hHHHHHHhCCC----CCCC
Confidence                   356788999999999999999999999999  999999999999999875532 33333333322    2234


Q ss_pred             cChHHHHhh
Q 023438          266 KNVQQVILN  274 (282)
Q Consensus       266 ~~~~~~~~~  274 (282)
                      ..|++.++.
T Consensus       207 ~~p~dva~~  215 (241)
T d2a4ka1         207 GRPEEVAQA  215 (241)
T ss_dssp             BCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            467777665

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-39  Score=282.74  Aligned_cols=191  Identities=26%  Similarity=0.295  Sum_probs=170.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC---------hhhHHHHHHHHHHhCCCCceeEEEccCCCHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD---------IAAGKDVKETIVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~---------~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      .|+++||++|||||++|||+++|++|+++|++|++.+|+         .+.+++..+++..     +...+.+|+++.++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-----cccccccccchHHH
Confidence            478999999999999999999999999999999998765         3445555555544     34567789999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438           97 VRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      ++++++.+.+++|++|+||||||+..  ++.+.+.++|++++++|+.++++++|+++|+|+++     +.|+||++||.+
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IV~isS~~  151 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----CCcEEEEeCChh
Confidence            99999999999999999999999764  47789999999999999999999999999999987     579999999998


Q ss_pred             ccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          175 HRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      +..               +.++...|++||+|+.+|+++|+.|++++|  ||||+|+||++.|++....
T Consensus       152 ~~~---------------~~~~~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~  203 (302)
T d1gz6a_         152 GIY---------------GNFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVM  203 (302)
T ss_dssp             HHH---------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGS
T ss_pred             hcC---------------CCCCcHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcC
Confidence            877               588899999999999999999999999999  9999999999988876544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-39  Score=276.40  Aligned_cols=192  Identities=25%  Similarity=0.260  Sum_probs=175.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |+||++||||||+|||+++|++|+++|++|++++|+.+.+++..+++.+.. +..+..+.+|+++.+++..+.+.+...+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999998887665 4578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      |.+|++++|||...  ...+.+.+++++++++|+.+++.++++++|+|++.      +|+||++||.++..         
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~---------  155 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKV---------  155 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTS---------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcC---------
Confidence            99999999999753  36678999999999999999999999999999864      68999999988876         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.+++..|++||+|+.+|+++|+.|++..+.+|+||+|+||+|+|++.+.
T Consensus       156 ------~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         156 ------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence                  68899999999999999999999999865555999999999999998653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.4e-39  Score=273.62  Aligned_cols=181  Identities=18%  Similarity=0.162  Sum_probs=163.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++.. ....       +.++|+++.++++++++++.+++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~-~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-hhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999999999888766543 3332       235899999999999999999999999


Q ss_pred             EEEEcCCCC---CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCC
Q 023438          113 ILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (282)
Q Consensus       113 ~vi~~ag~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  189 (282)
                      ++|||||+.   .+..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.++..            
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~IV~isS~~~~~------------  136 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFG------------  136 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTS------------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----ccceeeccccccccc------------
Confidence            999999964   345688999999999999999999999999999987     579999999988776            


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                         +.++..+|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++....
T Consensus       137 ---~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~  185 (252)
T d1zmta1         137 ---PWKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYF  185 (252)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSS
T ss_pred             ---ccccccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhh
Confidence               678889999999999999999999999999  9999999999999997754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.2e-39  Score=274.95  Aligned_cols=192  Identities=15%  Similarity=0.168  Sum_probs=162.6

Q ss_pred             CCCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .++|+||++|||||+|  |||+++|++|+++|++|++.+|+++..++ .+++.+.  .....++++|++|++++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEA--LGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH--TTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhc--cCcccccccccCCHHHHHHHHHH
Confidence            4689999999999986  99999999999999999999998765444 4444444  34678899999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCC------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccc
Q 023438          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~  177 (282)
                      +.+++|++|++|||||...      ...+.+.++|+..+++|+.+++.++|++.|+|++       +|+||++||..+..
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~~  152 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEK  152 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTS
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhcC
Confidence            9999999999999999742      2457788999999999999999999999998865       58999999988766


Q ss_pred             cccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          178 AYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                                     +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++.+...
T Consensus       153 ---------------~~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~  202 (256)
T d1ulua_         153 ---------------VVPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIP  202 (256)
T ss_dssp             ---------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC---------
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchh
Confidence                           578899999999999999999999999999  99999999999999877653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.5e-38  Score=264.50  Aligned_cols=176  Identities=22%  Similarity=0.210  Sum_probs=154.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++       .    ...++.+|+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~----~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S----GHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T----CSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c----CCcEEEcchHHH------HHHHHHHh
Confidence            799999999999999999999999999999999999654322       1    245678999863      34455667


Q ss_pred             CCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +++|++|||||...  +..+.+.++|++.+++|+.+++.++|+++|+|+++     +.|+||+++|..+..         
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~G~ii~i~S~~~~~---------  130 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVIS---------  130 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS---------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-----ccccccccccccccc---------
Confidence            89999999999753  36788999999999999999999999999999986     578999999977665         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            +.+....|+++|+|+.+|+++++.|++++|  ||||+|+||+++|++.+..
T Consensus       131 ------~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~  179 (234)
T d1o5ia_         131 ------PIENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKEL  179 (234)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHH
T ss_pred             ------cccccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhh
Confidence                  578889999999999999999999999999  9999999999999997653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=272.91  Aligned_cols=189  Identities=23%  Similarity=0.292  Sum_probs=157.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEE---EcChhhHHHHHHHHHHh-CCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG---VRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~---~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .|+|||||||+|||+++|++|+++|++|+++   +|+.+..+.+.+...+. ..+.++.++.+|++|+++++.+++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            4789999999999999999999999975554   45554444443333321 225689999999999999999998874 


Q ss_pred             cCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                       .|.+|++|||||...  +..+.+.++|++.+++|+.|+++++|+++|+|+++     +.|+||++||.++..       
T Consensus        81 -~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----~~G~Iv~isS~~g~~-------  147 (285)
T d1jtva_          81 -EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLM-------  147 (285)
T ss_dssp             -TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTS-------
T ss_pred             -ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----CCCceEEEechhhcC-------
Confidence             378999999999753  46788999999999999999999999999999987     579999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.++.+.|++||+|+.+|+++|+.|++++|  ||||+|+||+|+|++.+..
T Consensus       148 --------~~~~~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         148 --------GLPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHh
Confidence                    688899999999999999999999999999  9999999999999998753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.2e-38  Score=271.03  Aligned_cols=191  Identities=24%  Similarity=0.335  Sum_probs=170.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+.  +.++.++++|++++++++++++++.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHH
Confidence            45999999999999999999999999999999999877 45566677777665  5579999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +++|++|++|||+|...  +..+.+.++|++.+++|+.+++.++|+++|+|.+       ++++++++|..+...     
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~-----  159 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAK-----  159 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCS-----
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccccccc-----
Confidence            99999999999999753  4678899999999999999999999999999975       478888888765442     


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                               +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++.+.
T Consensus       160 ---------~~~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         160 ---------AVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             ---------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHH
T ss_pred             ---------cccchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHH
Confidence                     567788899999999999999999999999  999999999999998654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=5.2e-37  Score=266.94  Aligned_cols=197  Identities=21%  Similarity=0.181  Sum_probs=172.5

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +..+++||++|||||++|||+++|++|++.|++|++++|+.+.+++..+++.+.+ +.++.++++|++++++++.+++.+
T Consensus        19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhh
Confidence            3468999999999999999999999999999999999999999999999988766 457899999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC
Q 023438          105 NIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~  182 (282)
                      ..+++++|++|||||....  ..+.+.+++.+.+.+|+.+.+.+.++..+.+...    ...+.+++++|..+..     
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~i~~~ss~~~~~-----  168 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAET-----  168 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHH-----
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc----cccccccccccchhhh-----
Confidence            9999999999999997543  5678889999999999999999999988877664    2466788888877665     


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                +.++..+|+++|+|+++|++.++.|++++|  ||||+|+||+|+|++....
T Consensus       169 ----------~~~~~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~  217 (294)
T d1w6ua_         169 ----------GSGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSR  217 (294)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------
T ss_pred             ----------cccccchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhc
Confidence                      577888999999999999999999999999  9999999999999997653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2e-37  Score=263.35  Aligned_cols=197  Identities=24%  Similarity=0.331  Sum_probs=168.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHH---HcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh-
Q 023438           31 GLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-  106 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~---~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~-  106 (282)
                      .|+||||||++|||+++|++|+   +.|++|++++|+.+.++++. ++.+.  ..++.++++|++|+++++++++.++. 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            4899999999999999999996   57999999999999887764 44444  44799999999999999999999854 


Q ss_pred             -cCCCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCeEEEEcCCccc
Q 023438          107 -QHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHR  176 (282)
Q Consensus       107 -~~g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~------~~~~g~iv~vsS~~~~  176 (282)
                       +++++|++|||||+...   ..+.+.++|++.+++|+.+++.++++++|+|+++...      ...++++|+++|..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence             67899999999997532   4578899999999999999999999999999976321      1246899999998765


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNS  244 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~  244 (282)
                      ..            ..+.+++.+|++||+|+.+|+++++.|++++|  |+||+|+||+++|+|.....
T Consensus       159 ~~------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         159 IQ------------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             ST------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTC
T ss_pred             cC------------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccC
Confidence            42            11456678999999999999999999999999  99999999999999987653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-38  Score=271.40  Aligned_cols=203  Identities=27%  Similarity=0.293  Sum_probs=167.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +++|||||++|||+++|++|++. |++|++++|+.+++++..+++.+.  +.++.+++||++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46699999999999999999986 899999999999999999999877  457899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc---
Q 023438          111 LNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF---  185 (282)
Q Consensus       111 id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~---  185 (282)
                      +|+||||||+..+  ..+.+.++|+..+++|+.++++++++++|+|++       .|+||++||..+..+.....+|   
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhh
Confidence            9999999997643  456677889999999999999999999999964       4899999998765431111000   


Q ss_pred             -----------------------cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCccccCcc
Q 023438          186 -----------------------DKINDPSGYNGFRAYSQSKLANILHANELARRLKED--GVDITANSVHPGAIATNII  240 (282)
Q Consensus       186 -----------------------~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~--g~~i~v~~v~Pg~v~t~~~  240 (282)
                                             ..-....+..+...|++||+++.+|++.++.|++++  +.+|+||+|+||+|+|+|.
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                   000111223345679999999999999999999763  2239999999999999998


Q ss_pred             ccC
Q 023438          241 RHN  243 (282)
Q Consensus       241 ~~~  243 (282)
                      ...
T Consensus       235 ~~~  237 (275)
T d1wmaa1         235 GPK  237 (275)
T ss_dssp             CTT
T ss_pred             cCc
Confidence            754

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-37  Score=260.42  Aligned_cols=182  Identities=25%  Similarity=0.357  Sum_probs=158.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++..    +   ...+....+|+.+.+.++...+    .+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~----~---~~~~~~~~~d~~~~~~~~~~~~----~~   72 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----K---YPGIQTRVLDVTKKKQIDQFAN----EV   72 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----G---STTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----h---ccCCceeeeecccccccccccc----cc
Confidence            89999999999999999999999999999999999977654432    2   2357788899988766655544    46


Q ss_pred             CCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          109 HQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       109 g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      +.+|++|||||....  ..+.+.++|++.+++|+.+++.++|++.|+|.++     +.|+||+++|..+...        
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~g~Ii~isS~~~~~~--------  139 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVK--------  139 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB--------
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-----CCceeeeeechhhccC--------
Confidence            799999999997644  6788999999999999999999999999999986     6789999999766432        


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                            +.+.+..|+++|+|+++|+++|+.|++++|  ||||+|+||+++||+.+.
T Consensus       140 ------~~~~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         140 ------GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHH
T ss_pred             ------CccchhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHh
Confidence                  577889999999999999999999999999  999999999999999765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-36  Score=256.32  Aligned_cols=194  Identities=24%  Similarity=0.292  Sum_probs=170.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+|||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.+.....+|+.+.+.++...+.+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999999988887776     456888999999999999999999888


Q ss_pred             CCCccEEEEcCCCCC--------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEcCCccccc
Q 023438          108 HHQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       108 ~g~id~vi~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~g~iv~vsS~~~~~~  178 (282)
                      ++.+|.+++|+++..        +..+.+.++|++.+++|+.++++++|++.|++..+... ..++|+||++||..+.. 
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-  155 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-  155 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-
Confidence            889999999988532        23467889999999999999999999999999875332 23468999999998876 


Q ss_pred             ccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                    +.++++.|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++....
T Consensus       156 --------------~~~~~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~  204 (248)
T d2o23a1         156 --------------GQVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSL  204 (248)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC-----
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcC
Confidence                          688999999999999999999999999999  9999999999999998764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-36  Score=257.19  Aligned_cols=200  Identities=29%  Similarity=0.319  Sum_probs=158.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+.|+||||||++|||+++|++|+++|+  +|++.+|+.+.++++.    +.. +.++.++++|+++.++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIK-DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hhh-CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  6889999998876543    322 45799999999999999999999988


Q ss_pred             cCC--CccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCeEEEEcCCcc
Q 023438          107 QHH--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGH  175 (282)
Q Consensus       107 ~~g--~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~------~~~~g~iv~vsS~~~  175 (282)
                      .++  ++|++|||||+..   +..+.+.++|++.+++|+.|+++++++++|+|+++...      ....++++++++..+
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            765  4999999999753   35678889999999999999999999999999986431      123478888888655


Q ss_pred             cccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          176 RLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .....        ....+..+..+|++||+|+.+|+++|+.|+++.|  |+||+|+||+|+|+|....
T Consensus       156 ~~~~~--------~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         156 SITDN--------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             CSTTC--------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------
T ss_pred             cccCC--------cccccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCC
Confidence            43211        1112334456799999999999999999999999  9999999999999997643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-34  Score=240.67  Aligned_cols=177  Identities=15%  Similarity=0.131  Sum_probs=152.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc--
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ--  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~--  107 (282)
                      +||++|||||++|||+++|++|+++|++|++++++....            ......+.+|.++.++.+.+...+...  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999875430            234556678888888888888877664  


Q ss_pred             CCCccEEEEcCCCCC---CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       108 ~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+++|++|||||...   ...+.+.++|++.+++|+.++++++++++|+|++       +|+||++||.++..       
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~-------  134 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALD-------  134 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS-------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcC-------
Confidence            357999999999643   2445667889999999999999999999999964       58999999988876       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhcc--CCCcEEEEEeeCCccccCcccc
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKE--DGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~--~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                              +.+++.+|++||+|+++|+++|+.|++.  .|  ||||+|+||+++||+.+.
T Consensus       135 --------~~~~~~~Y~asKaal~~lt~~la~El~~~~~g--I~vn~v~PG~v~T~~~~~  184 (236)
T d1dhra_         135 --------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRK  184 (236)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHH
T ss_pred             --------CccCCcccHHHHHHHHHHHHHHHHHhccCCCc--EEEEEEEeccCcCCcchh
Confidence                    6888999999999999999999999984  56  999999999999999664

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.2e-32  Score=237.71  Aligned_cols=190  Identities=19%  Similarity=0.202  Sum_probs=151.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC-hhhHHHHHHHHHHhCCCCceeE-----------------EEccCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDA-----------------MELDLSS   93 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~-~~~~~~~~~~l~~~~~~~~v~~-----------------~~~Dvs~   93 (282)
                      .++|||||++|||+++|++|+++|++|++.+++ .+..+.+.+++.+..+. ....                 +.+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            689999999999999999999999999998765 55666777777766532 3444                 4456999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCCCCC--CCcCChhhH--------------HHHHHHHHHHHHHHHHHHHHHHHhh
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNI--------------ELQFATNHLGHFLLTNLLLDTMKKT  157 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~~~~--~~~~~~~~~--------------~~~~~~n~~~~~~~~~~~~~~l~~~  157 (282)
                      .++++++++++.+++|++|+||||||...+  ..+.+.+++              ...+.+|+.++++++|.+.+.+...
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999997533  344444333              3578999999999999999987654


Q ss_pred             hc-cCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 023438          158 AR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  236 (282)
Q Consensus       158 ~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  236 (282)
                      .. ..+..++|++++|.....               +.+++.+|+++|+|+.+|+++|+.|++++|  ||||+|+||++.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~t~  224 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSV  224 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBC
T ss_pred             HHHhcCCCCcccccccccccC---------------CccceeeeccccccchhhhHHHHHHhCCcc--cccccccccccc
Confidence            32 223567899999876655               678889999999999999999999999999  999999999865


Q ss_pred             cCc
Q 023438          237 TNI  239 (282)
Q Consensus       237 t~~  239 (282)
                      +..
T Consensus       225 ~~~  227 (284)
T d1e7wa_         225 LVD  227 (284)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.2e-34  Score=239.70  Aligned_cols=179  Identities=13%  Similarity=0.036  Sum_probs=150.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh--cC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~--~~  108 (282)
                      +.+||||||++|||+++|++|+++|++|++++|+....            ......+.+|+.+.++.....+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999986431            22455667888888887777776665  56


Q ss_pred             CCccEEEEcCCCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          109 HQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                      +++|+||||||....   ..+.+.++|+.++++|+.+++.++|+++|+|++       +|+||++||..+..        
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~--------  134 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMG--------  134 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGS--------
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcC--------
Confidence            899999999996432   334455789999999999999999999999964       58999999988776        


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                             +.+++..|+++|+|+++|+++|+.|++..+.+|+||+|+||+++|++++..
T Consensus       135 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~  185 (235)
T d1ooea_         135 -------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW  185 (235)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred             -------CcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhh
Confidence                   688899999999999999999999998654559999999999999987653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3e-32  Score=232.25  Aligned_cols=188  Identities=13%  Similarity=0.174  Sum_probs=161.9

Q ss_pred             CCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+ ..+++...  ......+.+|+++.+++...++++..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence            7899999999998  8999999999999999999999966544 44555554  33577889999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccc
Q 023438          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~  179 (282)
                      .++++|++|+||+....       ......+.+...+++|+.+.+.+++++.+.+.+       ++.|+++||..+..  
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~--  150 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER--  150 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTS--
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhcc--
Confidence            99999999999987432       123566778889999999999999999988754       46789999977665  


Q ss_pred             cCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          180 HEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                                   +.+.+..|+++|+|+++|+++++.|++++|  ||||+|+||+++|++....
T Consensus       151 -------------~~~~~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  199 (258)
T d1qsga_         151 -------------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGI  199 (258)
T ss_dssp             -------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGS
T ss_pred             -------------CCCCcHHHHHHHHHHHHHHHHHHHHhCccC--ceeeccccccccccccccc
Confidence                         578889999999999999999999999999  9999999999999997764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.98  E-value=3.5e-32  Score=236.27  Aligned_cols=199  Identities=18%  Similarity=0.123  Sum_probs=155.0

Q ss_pred             CCCCCCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC------------CceeEEEcc
Q 023438           25 DGIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS------------AKVDAMELD   90 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~------------~~v~~~~~D   90 (282)
                      +.++|+||++|||||+|  |||+++|++|+++|++|++.+|+.................            .++..+..+
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            56899999999999875  9999999999999999999999865543333222211100            012222222


Q ss_pred             ------------------CCCHHHHHHHHHHHHhcCCCccEEEEcCCCC----CCCCcCChhhHHHHHHHHHHHHHHHHH
Q 023438           91 ------------------LSSLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTN  148 (282)
Q Consensus        91 ------------------vs~~~~i~~~~~~i~~~~g~id~vi~~ag~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~  148 (282)
                                        .++..+++++++++.+++|++|++|||||..    .+..+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              2455667899999999999999999999964    346678999999999999999999999


Q ss_pred             HHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhc-cCCCcEEE
Q 023438          149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLK-EDGVDITA  227 (282)
Q Consensus       149 ~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~-~~g~~i~v  227 (282)
                      ++++++.+       +++++++++.+....              ..+....|+++|+++.++++.++.|++ ++|  |||
T Consensus       162 ~~~~~~~~-------~g~~~~~~~~~~~~~--------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~g--Irv  218 (297)
T d1d7oa_         162 HFLPIMNP-------GGASISLTYIASERI--------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRV  218 (297)
T ss_dssp             HHGGGEEE-------EEEEEEEECGGGTSC--------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEE
T ss_pred             HHHHHhhc-------CCcceeeeehhhccc--------------ccccccceecccccccccccccchhccccce--EEe
Confidence            99988765       356666666554432              346677899999999999999999996 578  999


Q ss_pred             EEeeCCccccCccccCchh
Q 023438          228 NSVHPGAIATNIIRHNSLF  246 (282)
Q Consensus       228 ~~v~Pg~v~t~~~~~~~~~  246 (282)
                      |+|+||+++|++.+.....
T Consensus       219 N~I~PG~i~T~~~~~~~~~  237 (297)
T d1d7oa_         219 NTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             EEEEECCCBCCCSSCCSHH
T ss_pred             cccccccccchhhhhccCC
Confidence            9999999999998865433

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=2.6e-32  Score=240.70  Aligned_cols=188  Identities=16%  Similarity=0.192  Sum_probs=153.4

Q ss_pred             CCCEEEEec--CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCC----------CceeEEE---------
Q 023438           30 SGLTAIVTG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS----------AKVDAME---------   88 (282)
Q Consensus        30 ~~~~~lItG--~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~----------~~v~~~~---------   88 (282)
                      .+|++||||  +++|||++||+.|+++|++|++.+++............+.+..          .....+.         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  6689999999999999999999998876655444433322210          0112222         


Q ss_pred             -----------ccCCCHHHHHHHHHHHHhcCCCccEEEEcCCCCC----CCCcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 023438           89 -----------LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (282)
Q Consensus        89 -----------~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  153 (282)
                                 +|+++.++++.+++.+.+.+|++|++|||||...    +..+.+.++|++.+++|+.+.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       3667888899999999999999999999999643    3567899999999999999999999999999


Q ss_pred             HHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCCCCCC-CccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEee
Q 023438          154 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGYNG-FRAYSQSKLANILHANELARRLKE-DGVDITANSVH  231 (282)
Q Consensus       154 l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~-~g~~i~v~~v~  231 (282)
                      |++       +|+||++||.++..               +.|+ ...|+++|+|+++|+++|+.|+++ +|  ||||+|+
T Consensus       161 m~~-------~GsIv~iss~~~~~---------------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNaI~  216 (329)
T d1uh5a_         161 MKP-------QSSIISLTYHASQK---------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTIS  216 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEE
T ss_pred             ccc-------ccccccceeehhcc---------------cccccchhhhhhhccccccchhhHHHHhcccC--cEEEEEe
Confidence            954       58999999977765               4555 457899999999999999999986 58  9999999


Q ss_pred             CCccccCccc
Q 023438          232 PGAIATNIIR  241 (282)
Q Consensus       232 Pg~v~t~~~~  241 (282)
                      ||+|+|+..+
T Consensus       217 PG~i~T~a~~  226 (329)
T d1uh5a_         217 AGPLKSRAAT  226 (329)
T ss_dssp             ECCCCCTTGG
T ss_pred             cCcccchhhh
Confidence            9999996544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=3.3e-31  Score=223.14  Aligned_cols=208  Identities=24%  Similarity=0.237  Sum_probs=164.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++|||||++|||+++|++|+++|++|++++|+.+              ..+...+++|+++......+.+....... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcccc-
Confidence            489999999999999999999999999999999853              33577889999999999998888766654 


Q ss_pred             ccEEEEcCCCC------CCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCeEEEEcCCcccccccCCc
Q 023438          111 LNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       111 id~vi~~ag~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      .+.++.+++..      ......+.+.+++.+++|+.+.+.+++.+.+.+.+..+ ...+.|+||++||..+..      
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------  139 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------  139 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc------
Confidence            45556666542      12345677889999999999999999999999766432 123578999999998877      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccCchhhhhhHHHhhhhHHhhhh
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHNSLFRSMNTILHALPGIAGKC  263 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~  263 (282)
                               +.+++..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++...... ..........|..   .
T Consensus       140 ---------~~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~~---~  204 (241)
T d1uaya_         140 ---------GQIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPE-KAKASLAAQVPFP---P  204 (241)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCH-HHHHHHHTTCCSS---C
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhh-hHHHHHHhcCCCC---C
Confidence                     688999999999999999999999999999  999999999999999876543 2222333332210   1


Q ss_pred             cccChHHHHhh
Q 023438          264 LLKNVQQVILN  274 (282)
Q Consensus       264 ~~~~~~~~~~~  274 (282)
                      ...+|+|.++.
T Consensus       205 R~g~pedvA~~  215 (241)
T d1uaya_         205 RLGRPEEYAAL  215 (241)
T ss_dssp             SCCCHHHHHHH
T ss_pred             CCcCHHHHHHH
Confidence            23356666654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.97  E-value=1.3e-30  Score=223.97  Aligned_cols=192  Identities=15%  Similarity=0.096  Sum_probs=144.6

Q ss_pred             CCCCEEEEecCCC--hhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~--gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.  +....++.+|+++.++++++++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHH
Confidence            7999999999765  9999999999999999999999954 55566777666  44678899999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc
Q 023438          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  184 (282)
                      .+|++|++|+|+|....  ..+...++....+..+....+.........+.+..+   ..+.|+++++.+...       
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~-------  149 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTK-------  149 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTS-------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc---cCcceeeeccccccc-------
Confidence            99999999999997543  122222222333333333333333333333333211   233455555544333       


Q ss_pred             ccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 FDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                              +.+....|+++|+|+.+++++++.|++++|  ||||+|+||+++|++....
T Consensus       150 --------~~~~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~  198 (274)
T d2pd4a1         150 --------YMAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGI  198 (274)
T ss_dssp             --------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGS
T ss_pred             --------ccccchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCcccccc
Confidence                    567788999999999999999999999999  9999999999999987764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.97  E-value=1.5e-30  Score=222.31  Aligned_cols=193  Identities=19%  Similarity=0.170  Sum_probs=152.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCC----HHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSS----LASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~----~~~i~~~~~~i~~  106 (282)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++.+.++ .++..+.+|+.+    .+.++++++.+.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC-CceEEEecccccchhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998654 5667777777653 456677666644    5667788888889


Q ss_pred             cCCCccEEEEcCCCCCC--CC-----------cCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438          107 QHHQLNILINNAGIMGT--PF-----------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~--~~-----------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      ++|++|++|||||+..+  ..           +.....+...+..|+.+.+...+...+.+..........+.++++++.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            99999999999997543  11           122345667788899999998888888776543333345678888887


Q ss_pred             cccccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          174 GHRLAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..               +.+++..|++||+|+++++++++.|++++|  ||||+|+||+++|++...
T Consensus       161 ~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         161 MTDL---------------PLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             GGGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSC
T ss_pred             cccc---------------cCcchhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCC
Confidence            6654               678999999999999999999999999999  999999999999997654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.97  E-value=1.6e-30  Score=222.49  Aligned_cols=185  Identities=20%  Similarity=0.191  Sum_probs=151.6

Q ss_pred             CCCCEEEEec--CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG--~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+||++||||  |++|||+++|++|+++|++|++++|+.++..+   ++.+.. +.+...+++|++++++++.+++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence            7899999999  45799999999999999999999999876533   333443 45788899999999999999999876


Q ss_pred             c---CCCccEEEEcCCCCC-------CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccc
Q 023438          107 Q---HHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (282)
Q Consensus       107 ~---~g~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~  176 (282)
                      .   ++++|+++||+|+..       +..+.+.+++...+++|+.+.+...+...++...        +.+++++|....
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~~  151 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFDPS  151 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECCCS
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc--------cccccccccccc
Confidence            5   577999999999642       2346778899999999999999888887665432        344444443333


Q ss_pred             ccccCCccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          177 LAYHEGIRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .               +.|++..|+++|+|+.+|+++++.|+++.|  ||||+|+||+++|+++..
T Consensus       152 ~---------------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~~  200 (268)
T d2h7ma1         152 R---------------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSA  200 (268)
T ss_dssp             S---------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHH
T ss_pred             c---------------cCcccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhhh
Confidence            3               578889999999999999999999999999  999999999999998653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=1.6e-28  Score=209.17  Aligned_cols=178  Identities=24%  Similarity=0.263  Sum_probs=145.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh---hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.||++|.++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhcccc
Confidence            346999999999999999999999999 6999999753   445556666544  6689999999999999999999886


Q ss_pred             hcCCCccEEEEcCCCCC--CCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                      +. +++|.++||+|...  +..+.+.++++..+++|+.+++++.+.+    ...     +.++||++||.++..      
T Consensus        86 ~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-----~~~~iv~~SS~a~~~------  149 (259)
T d2fr1a1          86 DD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----REL-----DLTAFVLFSSFASAF------  149 (259)
T ss_dssp             TT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-----CCSEEEEEEEHHHHT------
T ss_pred             cc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hcc-----CCceEeeecchhhcc------
Confidence            55 58999999999764  3678899999999999999998887653    222     467999999998887      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                               +.++++.|+++|+++++|++    ++...|  +++++|+||.+.++.+
T Consensus       150 ---------g~~~~~~YaAaka~l~~la~----~~~~~G--i~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         150 ---------GAPGLGGYAPGNAYLDGLAQ----QRRSDG--LPATAVAWGTWAGSGM  191 (259)
T ss_dssp             ---------CCTTCTTTHHHHHHHHHHHH----HHHHTT--CCCEEEEECCBC----
T ss_pred             ---------CCcccHHHHHHHHhHHHHHH----HHHhCC--CCEEECCCCcccCCcc
Confidence                     68889999999999776654    555668  8999999999875543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=1.3e-25  Score=190.51  Aligned_cols=181  Identities=22%  Similarity=0.226  Sum_probs=129.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh-cCCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-QHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~-~~g~  110 (282)
                      |+||||||++|||+++|++|++.|++|++++|+...                   ..+|+++.+..+.....+.. ..+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999987432                   34699999888887665544 4567


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc------
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR------  184 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~------  184 (282)
                      +|++++|||+..     ..+.+.....+|+.+...+.+.+.+.+.+.     ....+.++++...........+      
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----ccCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999999643     334567788999999999999999998875     3456666665433221000000      


Q ss_pred             ------ccCCC-CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          185 ------FDKIN-DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       185 ------~~~~~-~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                            ...+. .....++..+|++||+|+++|+++|+.|++++|  ||||+|+||+++||+.+..
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~  196 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhh
Confidence                  00000 001233456799999999999999999999999  9999999999999997754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.5e-21  Score=170.60  Aligned_cols=187  Identities=15%  Similarity=0.068  Sum_probs=138.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-----HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+||||||+|.||.+++++|++.|++|+.++|....     ++...++....  ..++.++.+|++|.++++++++.+  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCHHHHHHHHhcc--
Confidence            899999999999999999999999999999985432     22222221111  347899999999999999999986  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+++|+|+....  ..+.++....+++|+.++..+++++...-.+      +..++|++||...+ +.   ....
T Consensus        78 ---~~d~v~h~aa~~~~--~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------~~~r~i~~SS~~vY-G~---~~~~  142 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELY-GL---VQEI  142 (357)
T ss_dssp             ---CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGG-TT---CCSS
T ss_pred             ---CCCEEEEeeccccc--chhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEEchhhh-CC---CCCC
Confidence               78999999997543  2345667778999999999988887554322      24589999996543 21   2223


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ++.++.+..+...|+.+|.+.+.+++.++..+   +  +.+..++|+.+.+|....
T Consensus       143 ~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~--l~~~ilR~~~vyGp~~~~  193 (357)
T d1db3a_         143 PQKETTPFYPRSPYAVAKLYAYWITVNYRESY---G--MYACNGILFNHESPRRGE  193 (357)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTSCT
T ss_pred             CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeccccCCCCCc
Confidence            46666677677899999999999999888776   3  566679999999986443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=7.1e-19  Score=154.73  Aligned_cols=187  Identities=18%  Similarity=0.103  Sum_probs=134.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+||||||+|+||.+++++|++.|++|+++++......+......... ..++.++.+|++|.++++.+++..     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            789999999999999999999999999999764322211111111111 346889999999999999988764     79


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      |+|||+|+....  ....++....+.+|+.++..+++++...         +-.++|++||...+..........++.++
T Consensus        76 d~VihlAa~~~~--~~~~~~~~~~~~~N~~~t~~ll~~~~~~---------~i~~~i~~SS~~vyg~~~~~~~~~~~~e~  144 (347)
T d1z45a2          76 DSVIHFAGLKAV--GESTQIPLRYYHNNILGTVVLLELMQQY---------NVSKFVFSSSATVYGDATRFPNMIPIPEE  144 (347)
T ss_dssp             CEEEECCSCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             CEEEEccccccc--cccccCcccccccchhhhHHHHHHHHhc---------ccceEEeecceeeecCcccCCCCCccccc
Confidence            999999996432  1234455677889999999888887543         23489999997765432222333456666


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccC
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATN  238 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~  238 (282)
                      .+..+...|+.+|.+.+.+++.+..... .+  +.+..++|+.+..+
T Consensus       145 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~--~~~~~lR~~~v~g~  188 (347)
T d1z45a2         145 CPLGPTNPYGHTKYAIENILNDLYNSDK-KS--WKFAILRYFNPIGA  188 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHST-TS--CEEEEEEECEEECC
T ss_pred             cCCCCCChhHhHHHHHHHHHHHHHHhhc-cC--CcEEEEeecceEee
Confidence            6666778899999999888888776543 23  56666777766544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3e-18  Score=150.25  Aligned_cols=187  Identities=13%  Similarity=0.036  Sum_probs=135.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-----HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |+||||||+|+||.+++++|.++|++|+.++|....     .+......... ...++.++.+|++|.+.+..+++..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchhhHHHHhhc--
Confidence            345999999999999999999999999999986432     12111111111 1346899999999999999999876  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++++++|+++...  ...+.++....+++|+.++..++.++..+...      +..++|++||.+.+ +   +....
T Consensus        79 ---~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------~~~~~i~~SS~~vy-g---~~~~~  143 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELY-G---KVQEI  143 (347)
T ss_dssp             ---CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGT-C---SCSSS
T ss_pred             ---ccceeeeeeeccc--cchhhccchhhhhhHHHHHHHHHHHHHHcCCC------CCcEEEEecchhee-c---CCCCC
Confidence               7889999988532  22345556677899999999888877655332      24589999986543 2   22223


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.++.+..+...|+.||.+.+.++..+...+   +  +.+..++|+.+..|...
T Consensus       144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~--~~~~ilr~~~vyGp~~~  193 (347)
T d1t2aa_         144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---N--LFAVNGILFNHESPRRG  193 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCCC
Confidence            45667777778889999999999998887765   3  56666899988887543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2.2e-18  Score=151.09  Aligned_cols=184  Identities=16%  Similarity=0.052  Sum_probs=131.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      ++|||||+|.||++++++|++.|++|++++|............... ...++.++++|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            4999999999999999999999999999987433322222222111 1347999999999999999988874     789


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+...  ...+.++..+.+++|+.++..+++++...-         -.++|++||.+.+.......   ......
T Consensus        76 ~ViHlAa~~~--~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~~~---~~e~~~  141 (338)
T d1udca_          76 TVIHFAGLKA--VGESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPKIP---YVESFP  141 (338)
T ss_dssp             EEEECCSCCC--HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCSSS---BCTTSC
T ss_pred             EEEECCCccc--hhhHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEccccccc---cccccc
Confidence            9999999532  123445667889999999998888776552         34899988866543211111   111222


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                      ...+...|+.+|.+.+.++.....+..  +  +.+..++|+.+.++..
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         142 TGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGAHP  185 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECCCT
T ss_pred             cCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEeccC
Confidence            334577899999998888887776643  3  5666789998887743

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=7.7e-18  Score=150.38  Aligned_cols=192  Identities=13%  Similarity=0.093  Sum_probs=133.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh----------------hHHHHHHHHHHhCCCCceeEEEccCCCH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA----------------AGKDVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~----------------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      |++||||||+|.||.+++++|++.|++|+++|.-..                ...+....+.... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            689999999999999999999999999999973211                1122222222221 45789999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCC
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~  173 (282)
                      +.++++++..     ++|+|+|.|+.... ....+.+.....+++|+.++..++.++...-.        ..++++.||.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~  146 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTM  146 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCG
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeecccc
Confidence            9999999876     89999999986543 22345566778899999999988887765532        2366666665


Q ss_pred             cccccccCCcc--ccCCC-------CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          174 GHRLAYHEGIR--FDKIN-------DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       174 ~~~~~~~~~~~--~~~~~-------~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ..+........  +....       ...+..+...|+.+|.+.+.+++.+..++.     +.+.+++|+.+..|...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~~~~  218 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVKTD  218 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECSCCT
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCCCcc
Confidence            44332111110  00000       112334456799999999999988877663     67778999988887543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.77  E-value=1.4e-20  Score=152.49  Aligned_cols=113  Identities=18%  Similarity=0.207  Sum_probs=94.9

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..   .+....+|+++.+++++.+   
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~---   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV---   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT---
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh---
Confidence            3578999999999999999999999999999999999999999999988887653   4567889999998887664   


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL  149 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  149 (282)
                          +++|+||||||..  ....+.++|++.+++|+.+.++....
T Consensus        91 ----~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1          91 ----KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             ----TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred             ----cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHH
Confidence                4789999999963  33568888998888888776655433

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.76  E-value=2.2e-18  Score=152.65  Aligned_cols=196  Identities=15%  Similarity=0.109  Sum_probs=137.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEE-EEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vi-i~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +||||||+|.||.+++++|++.|++|+ .+++......  .+.+.......++.++.+|++|.+.+.++++..     ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            589999999999999999999999754 4553221110  111222222457999999999999999998875     79


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC------ccc
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG------IRF  185 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~------~~~  185 (282)
                      |+|||+|+....  ..+.++..+.+++|+.++..+++.+............+..++|++||...+......      ...
T Consensus        75 d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (361)
T d1kewa_          75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence            999999986432  234456677899999999999999988754310000023589999997655422111      111


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +...+..+..+...|+.+|.+.+.+++.++..+   |  +.+.+++|+.+.+|....
T Consensus       153 ~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~--i~~~~lR~~~vyGp~~~~  204 (361)
T d1kewa_         153 PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFP  204 (361)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCT
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEecCceECcCCCc
Confidence            112234455567789999999999999988766   3  667779999999987554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=2.5e-17  Score=143.76  Aligned_cols=189  Identities=14%  Similarity=0.049  Sum_probs=136.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh-----hHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~-----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++|||||||.||.+++++|+++|++|+.++|...     ........... .....+.++.+|+++.+++...++..  
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh--
Confidence            79999999999999999999999999999998532     11111111111 11346889999999999999988875  


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                         ++|+|||+|+....  ....++....++.|+.+...+..++........    ...++++.||... ...    ...
T Consensus        79 ---~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~~~~~ss~~~-~~~----~~~  144 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSG----RTVKYYQAGSSEM-FGS----TPP  144 (339)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHC----CCCEEEEEEEGGG-GTT----SCS
T ss_pred             ---ccchhhhccccccc--cccccCccccccccccccchhhhhhhhcccccc----cceeeeeccccee-ccc----CCC
Confidence               89999999996432  224456677899999999999988877665531    2334555555332 211    112


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ...++.+..+...|+.+|.+.+.++..+.+.+   +  +.+..++|+.+..|....
T Consensus       145 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~  195 (339)
T d1n7ha_         145 PQSETTPFHPRSPYAASKCAAHWYTVNYREAY---G--LFACNGILFNHESPRRGE  195 (339)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCT
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---C--CCEEEEEEccccCCCCCC
Confidence            35566677778899999999998888887765   3  777789999999986543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=1.1e-17  Score=146.82  Aligned_cols=190  Identities=17%  Similarity=0.134  Sum_probs=134.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+||+||||||+|.||.+++++|+++|++|+.+.|+........+.............+.+|++|.+++..++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            36899999999999999999999999999999999987766655444444334445567789999887766553      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccC---Cccc
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE---GIRF  185 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~~  185 (282)
                       ..|+++|+++....  .   ......+..|+.++..+++.+...-        .-.++|++||..+......   ....
T Consensus        83 -~~~~v~~~a~~~~~--~---~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF--S---NKYDEVVTPAIGGTLNALRAAAATP--------SVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             -TCSEEEECCCCCSC--C---SCHHHHHHHHHHHHHHHHHHHHTCT--------TCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             -cchhhhhhcccccc--c---ccccccccchhhhHHHHHHhhhccc--------ccccccccccceeeccCCCCCCCccc
Confidence             67999999986432  1   2234567889999887777664431        2358999999765432111   0000


Q ss_pred             c-------------CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          186 D-------------KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       186 ~-------------~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +             ...+..+..+...|+.+|.+.+.++..++.+... +  +++.+|+|+.+..|...
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~i~p~~v~Gp~~~  214 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSC
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-c--cccceecccceeCCCCC
Confidence            0             1223344455668999999999999988887643 3  77788999998887543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.75  E-value=3.5e-17  Score=141.79  Aligned_cols=186  Identities=16%  Similarity=0.057  Sum_probs=134.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+||||||+|+||++++++|+++|++|+.++|......  ...+.......++.++.+|++|.+.+.+.+...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998754321  112222222347899999999999999988876     67


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  191 (282)
                      ++++++|+....  ....++....+..|+.++..++.++...-.        ..++++.||.. +.+...   .....++
T Consensus        74 ~~~~~~a~~~~~--~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss~~-~~~~~~---~~~~~E~  139 (321)
T d1rpna_          74 QEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTSE-MFGLIQ---AERQDEN  139 (321)
T ss_dssp             SEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEGG-GGCSCS---SSSBCTT
T ss_pred             cccccccccccc--cccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccchh-hcCccc---CCCCCCC
Confidence            788888875332  223345577899999998888877755422        23666666643 333222   2234466


Q ss_pred             CCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccccC
Q 023438          192 SGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRHN  243 (282)
Q Consensus       192 ~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~~  243 (282)
                      .+......|+.+|.+.+.+++.+..++.     +.+..+.|+.+..|.....
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~~~  186 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIE  186 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTT
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCcccc
Confidence            6677778999999999999888887764     5666789999998875443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.72  E-value=1.4e-16  Score=139.83  Aligned_cols=188  Identities=18%  Similarity=0.123  Sum_probs=137.7

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+||+||||||+|.||.+++++|+++|++|++++|+........+... .  ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~--~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-V--ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-T--TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-c--ccCCeEEEeeccChHhhhhhhhhc----
Confidence            478999999999999999999999999999999998766544433321 1  236899999999999999988876    


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       .+|+++|+|+...  ...+.+.....+++|+.++..+++++...-        ....+++.|+......   .....+.
T Consensus        79 -~~~~v~~~aa~~~--~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--------~~~~~~~~s~~~~~~~---~~~~~~~  144 (356)
T d1rkxa_          79 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHVG--------GVKAVVNITSDKCYDN---KEWIWGY  144 (356)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEECCGGGBCC---CCSSSCB
T ss_pred             -hhhhhhhhhcccc--ccccccCCccccccccccchhhhhhhhccc--------cccccccccccccccc---ccccccc
Confidence             7899999998532  233456677889999999888887776542        1234555554333221   1111223


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhcc------CCCcEEEEEeeCCccccCc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKE------DGVDITANSVHPGAIATNI  239 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~------~g~~i~v~~v~Pg~v~t~~  239 (282)
                      .++.+..+...|+.+|.+.+.+++.++.++..      .+  +.+..+.|+.+..|-
T Consensus       145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGG  199 (356)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTT
T ss_pred             ccccccCCCCccccccccchhhhhHHhhhcccchhccccC--ceEEeccCCCeeCCC
Confidence            34445556778999999999999888887642      24  677789999888775

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=3.8e-17  Score=143.06  Aligned_cols=189  Identities=13%  Similarity=0.031  Sum_probs=135.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC---CCCceeEEEccCCCHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~---~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ..++.|++|||||+|.||++++++|.+.|++|+.++|....-......+....   ...++.++.+|+.|......... 
T Consensus        12 ~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-   90 (341)
T d1sb8a_          12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-   90 (341)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-
Confidence            34566899999999999999999999999999999864332222222222111   12368899999999776554432 


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                            ..+.++|.++....  ..+.++....+++|+.++..+++++...         +..++|++||...+. ..   
T Consensus        91 ------~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------~~~~~i~~SS~~vyg-~~---  149 (341)
T d1sb8a_          91 ------GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYG-DH---  149 (341)
T ss_dssp             ------TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGT-TC---
T ss_pred             ------cccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc---------CCceEEEcccceeeC-CC---
Confidence                  56788888875322  2256677888999999999988877544         235899999976543 22   


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      +..+..++.+..+...|+.+|.+.+.+++.++....     +++..++|+.+.++....
T Consensus       150 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~  203 (341)
T d1sb8a_         150 PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDP  203 (341)
T ss_dssp             CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCC
T ss_pred             CCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCC
Confidence            223456666777788999999999999998887663     556679999998876543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.1e-16  Score=136.50  Aligned_cols=167  Identities=14%  Similarity=0.095  Sum_probs=122.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+||||||+|.||++++++|++.|+.|+++++..                 +     +|+.+.+.+..+++..     ++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------~-----~~~~~~~~~~~~~~~~-----~~   55 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------E-----LNLLDSRAVHDFFASE-----RI   55 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------T-----CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------h-----ccccCHHHHHHHHhhc-----CC
Confidence            6899999999999999999999999988765421                 1     5999999998887754     78


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc--cCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DKIN  189 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~--~~~~  189 (282)
                      |.++|+|+..... .....+..+.+++|+.++..+++++..+         +-.++|++||.+.+.. ....+.  +...
T Consensus        56 d~v~~~a~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~v~~~i~~SS~~vyg~-~~~~~~~E~~~~  124 (315)
T d1e6ua_          56 DQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPK-LAKQPMAESELL  124 (315)
T ss_dssp             SEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCT-TCCSSBCGGGTT
T ss_pred             CEEEEcchhcccc-ccchhhHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEECCceEcCC-CCCCCccCCccc
Confidence            9999999864331 1233445567889999988888777554         2348999999776542 221111  1122


Q ss_pred             CCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          190 DPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       190 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      +..+.+....|+.+|.+.+.+++.+..+.   |  +++..++|+.+.+|...
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCC
Confidence            22333445679999999999999998776   4  77788999999988643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.68  E-value=1.9e-15  Score=131.05  Aligned_cols=169  Identities=17%  Similarity=0.116  Sum_probs=118.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh-HHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +||||||+|+||++++++|+++|++|+++++-... ..+..+.+..   ..++.++.+|++|.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            58999999999999999999999999998743222 2222233322   346899999999999999998876     78


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc--------
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI--------  183 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~--------  183 (282)
                      |+|||+|+....  ....++....+++|+.++..+++++...-         ..+.+++||...........        
T Consensus        74 d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeecccccc--cccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            999999986432  22344567889999999999887765542         23555555544443321111        


Q ss_pred             -----cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhcc
Q 023438          184 -----RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKE  220 (282)
Q Consensus       184 -----~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~  220 (282)
                           ............+...|+.+|...+.+.......+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                 1112223344556778999999999888888887753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.1e-16  Score=137.42  Aligned_cols=184  Identities=15%  Similarity=0.044  Sum_probs=126.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEc------ChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVR------DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r------~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      |+||||||+|.||.+++++|++.|++|+.+++      +.....+..+.+... ...++.++.+|++|.+.+++.+... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccccccccccccc-
Confidence            78999999999999999999999999999874      222222223332221 1457899999999999999887763 


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccc
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  185 (282)
                          ++++++|+|+....  ..+.++..+.+++|+.++..+++++...         +-.+++++||...+.......  
T Consensus        81 ----~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~---------~v~~~i~~ss~~~~~~~~~~~--  143 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAH---------GVKNLVFSSSATVYGNPQYLP--  143 (346)
T ss_dssp             ----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCSCSSSS--
T ss_pred             ----ccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhc---------Ccccccccccceeeecccccc--
Confidence                78899999996542  2344556778999999988877766433         234788888865543211111  


Q ss_pred             cCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          186 DKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       186 ~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                       .............|+.+|...+...+.++...  .+  +....++|+.+.++-
T Consensus       144 -~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         144 -LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KT--WNAVLLRYFNPTGAH  192 (346)
T ss_dssp             -BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TT--CEEEEEEECEEECCC
T ss_pred             -ccccccccccCChHHHHHHHHHHHHHHHHHhc--cC--CceEEEeecceeccC
Confidence             11111222344579999999888877765532  34  566678888877763

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.5e-16  Score=137.78  Aligned_cols=179  Identities=12%  Similarity=0.040  Sum_probs=121.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+||||||+|.||++++++|+++|++|+++++......+.....   ....++.....|+.+.            .+.++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSC------------CCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh---cCCCceEEEehHHHHH------------HHcCC
Confidence            78999999999999999999999999999986432211111111   1123455555555321            22368


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCC-ccccCCCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKIND  190 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~~~~  190 (282)
                      |+|||+|+....  ....++..+.+++|+.++..+++++...          +.++|++||.+.+...... ..-+...+
T Consensus        67 d~VihlAa~~~~--~~~~~~~~~~~~~Nv~g~~~ll~~~~~~----------~~k~I~~SS~~vy~~~~~~~~~e~~~~~  134 (312)
T d2b69a1          67 DQIYHLASPASP--PNYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGDPEVHPQSEDYWGH  134 (312)
T ss_dssp             SEEEECCSCCSH--HHHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred             CEEEECcccCCc--hhHHhCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEEChheecCCCCCCCCccccCC
Confidence            999999996432  1123456678999999988888766432          2489999996655321111 11122333


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..+..+...|+.+|.+.+.+++.++..+   |  +.+..++|+.+..|....
T Consensus       135 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~  181 (312)
T d2b69a1         135 VNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHM  181 (312)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCT
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCC
Confidence            4455667889999999999998888876   4  667779999999986543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=2.1e-16  Score=138.57  Aligned_cols=186  Identities=19%  Similarity=0.152  Sum_probs=128.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .|.||||||||.||.+++++|.+.|++|.+++++..........+ +.+.+.++.++.+|++|.+.+..+++       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            478999999999999999999999987555544311000000001 11224579999999999988888764       5


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccccc--CC------
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EG------  182 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~--~~------  182 (282)
                      .+.++|.|+.....  ....+..+.+++|+.++..++.++...          +.+++++||...+....  +.      
T Consensus        74 ~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~~~~  141 (346)
T d1oc2a_          74 ADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGE  141 (346)
T ss_dssp             CSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             hhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCcccccccccc
Confidence            67789999864331  233456678999999999988766443          34778887765543211  11      


Q ss_pred             ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          183 IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .+.....++.+..+...|+.+|.+.+.+++.+..++   |  +++.+++|+.+.+|...
T Consensus       142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~  195 (346)
T d1oc2a_         142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQH  195 (346)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCC
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCC
Confidence            112334455566667789999999999998888775   4  78888999999998543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.66  E-value=3.9e-15  Score=132.17  Aligned_cols=192  Identities=14%  Similarity=0.070  Sum_probs=134.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHH-cCCEEEEEEc---------ChhhHHHHHHHHHHhC------CCCceeEEEccCCCH
Q 023438           31 GLTAIVTGATSGIGTETARVLAL-RGVHVVMGVR---------DIAAGKDVKETIVKEI------PSAKVDAMELDLSSL   94 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~r---------~~~~~~~~~~~l~~~~------~~~~v~~~~~Dvs~~   94 (282)
                      +.+||||||+|+||.+++++|++ .|++|+++|+         ..+..+.....+....      ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 7899999874         1112233333332211      123578899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCc
Q 023438           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (282)
Q Consensus        95 ~~i~~~~~~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~  174 (282)
                      +.++++++.+    .++|+|+|+|+....  ....+.....+++|+.++..++.++...         +..+++++++..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~--~~~~~~~~~~~~~N~~~t~~~l~~~~~~---------~~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhcccccccc--cccccccccccccccccccccchhhhcc---------CCcccccccccc
Confidence            9999888764    478999999996432  2234455677899999988887776543         234777777755


Q ss_pred             ccccccC-C--ccccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          175 HRLAYHE-G--IRFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       175 ~~~~~~~-~--~~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      .+..... .  ....++.++.+..+...|+.+|.+.+.+++.+...+   |  +.+.+++|+.+..|....
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--l~~~~lR~~~vyG~~~~~  212 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAHEDG  212 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCCTTS
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---C--CCEEEEecceeeccCccc
Confidence            4432211 1  122345556666778899999999999888887765   3  677789999998887553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.4e-15  Score=132.81  Aligned_cols=179  Identities=12%  Similarity=-0.002  Sum_probs=124.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      +||||||+|.||++++++|+++|+ +|+.+++.........       ...++.++.+|+++.+++.+.+.+      ++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CC
Confidence            589999999999999999999994 8999988655433221       134799999999988776654332      57


Q ss_pred             cEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc---ccCC
Q 023438          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR---FDKI  188 (282)
Q Consensus       112 d~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~---~~~~  188 (282)
                      |+|||+|+....  ....++....+++|+.++..+++++...          +.+++++||...+........   ....
T Consensus        69 d~Vih~a~~~~~--~~~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~~~~~~~  136 (342)
T d2blla1          69 DVVLPLVAIATP--IEYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKYFDEDHSNL  136 (342)
T ss_dssp             SEEEECBCCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred             Cccccccccccc--cccccCCccccccccccccccccccccc----------cccccccccccccccccccccccccccc
Confidence            999999996433  1234555678999999988888776432          346777777655543222111   1111


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      .......+...|+.+|.+.+.+++.++..+   |  +.+..+.|..+..+...
T Consensus       137 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~i~r~~~~~g~~~~  184 (342)
T d2blla1         137 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLD  184 (342)
T ss_dssp             BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCC
T ss_pred             cccccCCCcchhhhcccchhhhhhhhhccc---C--ceeEEeecccccccccc
Confidence            222333455789999999999999888876   3  55566888888776433

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=8.4e-16  Score=135.43  Aligned_cols=182  Identities=18%  Similarity=0.090  Sum_probs=127.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++++||||||+|+||++|+++|.++|++|+++++.....      ....  .....+..+|+.+.+.+..+++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            556799999999999999999999999999998654321      0011  1245678889999887766553       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcc---cc
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR---FD  186 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~---~~  186 (282)
                      ++|.|||+|+..... ....+.....+.+|+.++..++.++...         +-.++|++||...+........   ..
T Consensus        79 ~~d~Vih~a~~~~~~-~~~~~~~~~~~~~n~~gt~~ll~~~~~~---------~vk~~i~~SS~~~~~~~~~~~~~~~~~  148 (363)
T d2c5aa1          79 GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETTNVSL  148 (363)
T ss_dssp             TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred             cCCeEeecccccccc-cccccccccccccccchhhHHHHhHHhh---------Ccccccccccccccccccccccccccc
Confidence            689999999865331 2234556677889999988887776554         2348999999665543221110   00


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ...+..+..+...|+.+|.+.+.+++.+..++   |  +.+..++|+.+.++...
T Consensus       149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         149 KESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSC
T ss_pred             ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEeccCCc
Confidence            11123344456789999999999888887776   4  77778999999887543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.62  E-value=3.7e-15  Score=129.23  Aligned_cols=180  Identities=17%  Similarity=0.120  Sum_probs=127.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEE------EEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHV------VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~V------ii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +||||||+|.||++++++|++.|++|      +.++........  ..+.......++.++.+|.++........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhccc-----
Confidence            58999999999999999999999754      434322111000  01111111457899999999987665432     


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                        ..+|+++|+|+....  ....++..+.+++|+.++..+++++...         +..++|++||.+.+..    ....
T Consensus        75 --~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~---------~~~~~I~~Ss~~~yg~----~~~~  137 (322)
T d1r6da_          75 --RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGS----IDSG  137 (322)
T ss_dssp             --TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCC----CSSS
T ss_pred             --cccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHc---------CCceEEEeecceeecC----CCCC
Confidence              378999999986432  2344556677899999999988877543         2358999998665532    1223


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                      ++.++.+..+...|+.+|.+.+.+++.++++.   |  +.+..++|+.+.+|...
T Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~  187 (322)
T d1r6da_         138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQH  187 (322)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEECcCCC
Confidence            45666777778899999999999999988776   4  67777999999998654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.9e-14  Score=116.88  Aligned_cols=155  Identities=18%  Similarity=0.131  Sum_probs=103.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      |..|+|+||||||+||.+++++|++.|++|.++.|+.+++...        ....+.++.+|++|.+++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4568999999999999999999999999999999997764321        13468899999999998887765      


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                       +.|+||+++|.....   +..      +++..+    ++.+++.+++.     +-.++|++||......          
T Consensus        67 -~~d~vi~~~g~~~~~---~~~------~~~~~~----~~~l~~aa~~~-----~v~r~i~~ss~~~~~~----------  117 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDL---SPT------TVMSEG----ARNIVAAMKAH-----GVDKVVACTSAFLLWD----------  117 (205)
T ss_dssp             -TCSEEEECCCCTTCC---SCC------CHHHHH----HHHHHHHHHHH-----TCCEEEEECCGGGTSC----------
T ss_pred             -CCCEEEEEeccCCch---hhh------hhhHHH----HHHHHHHHHhc-----CCCeEEEEeeeeccCC----------
Confidence             579999999964332   111      122333    33344445554     3468999998654321          


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIA  236 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~  236 (282)
                       .....+....|...|.+.+.+       +...|  ++...|+||.+.
T Consensus       118 -~~~~~~~~~~~~~~~~~~e~~-------l~~~~--~~~tiirp~~~~  155 (205)
T d1hdoa_         118 -PTKVPPRLQAVTDDHIRMHKV-------LRESG--LKYVAVMPPHIG  155 (205)
T ss_dssp             -TTCSCGGGHHHHHHHHHHHHH-------HHHTC--SEEEEECCSEEE
T ss_pred             -CccccccccccchHHHHHHHH-------HHhcC--CceEEEecceec
Confidence             011122233455555554433       23456  677779999775

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-14  Score=119.66  Aligned_cols=162  Identities=14%  Similarity=0.067  Sum_probs=111.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      ++.|++|+||||||||.||.+++++|.+.|.  +|++++|+.......      .  ...+....+|+.+.+++...+  
T Consensus         9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~~~--   78 (232)
T d2bkaa1           9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYASAF--   78 (232)
T ss_dssp             HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGGGG--
T ss_pred             HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeecccccccccccc--
Confidence            4568899999999999999999999999996  899999976442211      1  235677778887766554333  


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCc
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  183 (282)
                           ...|+++|++|..     ..........++|+.++..+++.+...         +-.++|++|+.....      
T Consensus        79 -----~~~d~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~fi~~Ss~~~~~------  133 (232)
T d2bkaa1          79 -----QGHDVGFCCLGTT-----RGKAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADK------  133 (232)
T ss_dssp             -----SSCSEEEECCCCC-----HHHHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT------
T ss_pred             -----ccccccccccccc-----ccccchhhhhhhcccccceeeeccccc---------CccccccCCcccccc------
Confidence                 3689999999853     122334556788888888877766332         345899999965432      


Q ss_pred             cccCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          184 RFDKINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                 .....|+.+|...+...+    +   .+.+ ++..++||.+.++...
T Consensus       134 -----------~~~~~Y~~~K~~~E~~l~----~---~~~~-~~~IlRP~~i~G~~~~  172 (232)
T d2bkaa1         134 -----------SSNFLYLQVKGEVEAKVE----E---LKFD-RYSVFRPGVLLCDRQE  172 (232)
T ss_dssp             -----------TCSSHHHHHHHHHHHHHH----T---TCCS-EEEEEECCEEECTTGG
T ss_pred             -----------CccchhHHHHHHhhhccc----c---cccc-ceEEecCceeecCCCc
Confidence                       234569999988664432    2   2311 3445899999887544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.40  E-value=3.3e-12  Score=104.52  Aligned_cols=165  Identities=15%  Similarity=0.097  Sum_probs=104.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCE--EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVH--VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~--Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++||||||+|+||++++++|++.|++  |+...|+.+....    +     ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~-----~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c-----cCCcEEEEeeeccccccccccc-------
Confidence            79999999999999999999999975  5566787654322    1     3468899999999998887765       


Q ss_pred             CccEEEEcCCCCCC-----------CCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCccccc
Q 023438          110 QLNILINNAGIMGT-----------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (282)
Q Consensus       110 ~id~vi~~ag~~~~-----------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~  178 (282)
                      ++|.+||+|+....           ..............+|+.++..+.......         ..+...+.++..... 
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~~~-  137 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGGTN-  137 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTTTC-
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---------cccccccccccccCC-
Confidence            67999999985321           112223445566788888877666544333         245677776644322 


Q ss_pred             ccCCccccCCCCCCCCCCCccchH-hHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCccc
Q 023438          179 YHEGIRFDKINDPSGYNGFRAYSQ-SKLANILHANELARRLKEDGVDITANSVHPGAIATNIIR  241 (282)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~y~a-sK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~  241 (282)
                                    +......+.. .+.........+.   ...|  +++..++||.+.++...
T Consensus       138 --------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         138 --------------PDHPLNKLGNGNILVWKRKAEQYL---ADSG--TPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             --------------TTCGGGGGGGCCHHHHHHHHHHHH---HHSS--SCEEEEEECEEECSCTT
T ss_pred             --------------CCcccccccccchhhhhhhhhhhh---hccc--ccceeecceEEECCCcc
Confidence                          1111122222 2222222222222   2345  66677999999877533

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.39  E-value=3.5e-12  Score=107.40  Aligned_cols=154  Identities=21%  Similarity=0.235  Sum_probs=106.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +||||||||.||++++++|.++|++|+.++|+.                       +|++|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999999999999998752                       4999999999988875     789


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+|+....  +.........+..|+.....+...+...          ...+++.||...+.    .....+..+..
T Consensus        55 ~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v~~----~~~~~~~~e~~  118 (281)
T d1vl0a_          55 VVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFD----GEAKEPITEFD  118 (281)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSC----SCCSSCBCTTS
T ss_pred             EEEeecccccc--ccccccchhhcccccccccccccccccc----------cccccccccceeee----ccccccccccc
Confidence            99999986432  2234445566777777765555444332          23566666643332    11222344555


Q ss_pred             CCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCc
Q 023438          193 GYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNI  239 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~  239 (282)
                      +..+...|+.+|...+.+++    +.   +  .....++|+.+..+-
T Consensus       119 ~~~~~~~~~~~k~~~e~~~~----~~---~--~~~~i~R~~~vyG~~  156 (281)
T d1vl0a_         119 EVNPQSAYGKTKLEGENFVK----AL---N--PKYYIVRTAWLYGDG  156 (281)
T ss_dssp             CCCCCSHHHHHHHHHHHHHH----HH---C--SSEEEEEECSEESSS
T ss_pred             cccchhhhhhhhhHHHHHHH----Hh---C--CCccccceeEEeCCC
Confidence            66677889999988665443    22   2  233459999998875

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.35  E-value=1.6e-12  Score=110.15  Aligned_cols=138  Identities=15%  Similarity=0.100  Sum_probs=97.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +||||||+|.||.+++++|.+.|.. +.+++....                   +.+|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            5999999999999999999998864 444443211                   336999999999998876     799


Q ss_pred             EEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCCCC
Q 023438          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (282)
Q Consensus       113 ~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  192 (282)
                      +|||+||....  +.+.+.....+++|+.++..+..++.    +      .+.+++++||...+.. ..+   .+..++.
T Consensus        57 ~Vih~Aa~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~------~~~~~~~~ss~~~~~~-~~~---~~~~E~~  120 (298)
T d1n2sa_          57 VIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAAN----E------TGAWVVHYSTDYVFPG-TGD---IPWQETD  120 (298)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHT----T------TTCEEEEEEEGGGSCC-CTT---CCBCTTS
T ss_pred             EEEEecccccc--cccccCccccccccccccccchhhhh----c------cccccccccccccccC-CCC---CCCcccc
Confidence            99999996532  22345556778999999877776653    2      2457788777554432 122   2344555


Q ss_pred             CCCCCccchHhHHHHHHHH
Q 023438          193 GYNGFRAYSQSKLANILHA  211 (282)
Q Consensus       193 ~~~~~~~y~asK~a~~~~~  211 (282)
                      +..+...|+.+|.+.+.+.
T Consensus       121 ~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_         121 ATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             CCCCSSHHHHHHHHHHHHH
T ss_pred             ccCCCchHhhhhhhhhhhH
Confidence            6666788999998866544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.19  E-value=2.4e-11  Score=98.45  Aligned_cols=151  Identities=15%  Similarity=0.080  Sum_probs=97.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|++|||||||.||.+++++|.+.|+  +|+...|+...          .  ..+   +..+..|..++.      ....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~---~~~~~~d~~~~~------~~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPR---LDNPVGPLAELL------PQLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTT---EECCBSCHHHHG------GGCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--ccc---ccccccchhhhh------hccc
Confidence            38999999999999999999999998  56666665321          0  112   334555543321      1234


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  188 (282)
                      +.+|.+|+++|....    .........++|+.++..+++.+.    +.     +-.+++++||..+.            
T Consensus        61 ~~~d~vi~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~a~----~~-----~v~~~i~~Ss~~~~------------  115 (212)
T d2a35a1          61 GSIDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRAL----EM-----GARHYLVVSALGAD------------  115 (212)
T ss_dssp             SCCSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHH----HT-----TCCEEEEECCTTCC------------
T ss_pred             cchheeeeeeeeecc----ccccccccccchhhhhhhcccccc----cc-----cccccccccccccc------------
Confidence            568999999985321    112224567888888887777653    22     34589999986543            


Q ss_pred             CCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcc
Q 023438          189 NDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNII  240 (282)
Q Consensus       189 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~  240 (282)
                           ......|..+|...+...+       ..+. -+...++|+.+..+..
T Consensus       116 -----~~~~~~y~~~K~~~E~~l~-------~~~~-~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         116 -----AKSSIFYNRVKGELEQALQ-------EQGW-PQLTIARPSLLFGPRE  154 (212)
T ss_dssp             -----TTCSSHHHHHHHHHHHHHT-------TSCC-SEEEEEECCSEESTTS
T ss_pred             -----cccccchhHHHHHHhhhcc-------cccc-ccceeeCCcceeCCcc
Confidence                 2334578999987654332       2231 1345589999987753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=8.1e-11  Score=99.69  Aligned_cols=173  Identities=14%  Similarity=0.067  Sum_probs=101.8

Q ss_pred             EEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH--hcCCC
Q 023438           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN--IQHHQ  110 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~--~~~g~  110 (282)
                      ||||||+|.||.+++++|++.|+ +|+++++-.... ... .+.+    ..    .+|..+.+   ...+.+.  ..+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~----~~----~~~~~~~~---~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVD----LN----IADYMDKE---DFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHT----SC----CSEEEEHH---HHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-cccc----cc----hhhhccch---HHHHHHhhhhcccc
Confidence            79999999999999999999997 687776322211 111 1111    11    12333333   3333332  23457


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCccccCCCC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  190 (282)
                      +++++|.|+....    .........+.|+.+...+..++...          .-++++.||.........    .....
T Consensus        69 ~~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~----------~i~~v~~ss~~~~~~~~~----~~~~~  130 (307)
T d1eq2a_          69 VEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTS----DFIES  130 (307)
T ss_dssp             CCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----------TCCEEEEEEGGGGTTCCS----CBCSS
T ss_pred             hhhhhhhcccccc----cccccccccccccccccccccccccc----------cccccccccccccccccc----ccccc
Confidence            8899999875332    22233445677777766666544332          234666666554433211    11222


Q ss_pred             CCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccccCcccc
Q 023438          191 PSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSVHPGAIATNIIRH  242 (282)
Q Consensus       191 ~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v~Pg~v~t~~~~~  242 (282)
                      ..+..+...|+.+|.+.+.+++.+..++   +  +.+..++|..+..|....
T Consensus       131 ~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~r~~~vyGp~~~~  177 (307)
T d1eq2a_         131 REYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGH  177 (307)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCGG
T ss_pred             ccccccccccccccchhhhhcccccccc---c--cccccccceeEeeccccc
Confidence            2334566789999999888877765543   4  555668898888876543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.15  E-value=2.7e-10  Score=96.56  Aligned_cols=82  Identities=13%  Similarity=0.105  Sum_probs=61.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++||||||||.||++++++|+++|++|+++.|+.........+........++.++.+|++|.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            45999999999999999999999999999999755432222221222224468899999999988877665       45


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      +.++++++.
T Consensus        77 ~~~~~~~~~   85 (312)
T d1qyda_          77 DVVISALAG   85 (312)
T ss_dssp             SEEEECCCC
T ss_pred             chhhhhhhh
Confidence            778888874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.98  E-value=9.5e-09  Score=88.98  Aligned_cols=78  Identities=22%  Similarity=0.180  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHH-HHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV-RNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i-~~~~~~i~~~~  108 (282)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+..+...  +.+. .  ..++..+++|+.|..++ +.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~--~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-A--IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-T--STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-c--cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            46899999999999999999999999999999998766432  2222 1  23688999999986653 3332       


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      ...|.++++..
T Consensus        70 ~~~~~~~~~~~   80 (350)
T d1xgka_          70 EGAHLAFINTT   80 (350)
T ss_dssp             TTCSEEEECCC
T ss_pred             cCCceEEeecc
Confidence            24566666554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.98  E-value=3.8e-09  Score=88.63  Aligned_cols=82  Identities=17%  Similarity=0.211  Sum_probs=62.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      -|+||||||||.||++++++|++.|++|++++|+......  ....+... ....+.++.+|+.+.......++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh-ccCCcEEEEeecccchhhhhhhh------
Confidence            4789999999999999999999999999999987554321  12222221 13468889999999988777665      


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                       ..+.++++++.
T Consensus        76 -~~~~vi~~~~~   86 (307)
T d1qyca_          76 -NVDVVISTVGS   86 (307)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -hceeeeecccc
Confidence             46788898874

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.77  E-value=5.7e-13  Score=106.33  Aligned_cols=47  Identities=21%  Similarity=0.244  Sum_probs=42.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI   79 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~   79 (282)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++...+++.+..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            46788888999999999999999999999999999999988887654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=2.9e-06  Score=66.33  Aligned_cols=84  Identities=19%  Similarity=0.214  Sum_probs=65.0

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHH---HHHHHhCCCCceeEEEccCCCHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~---~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      ..++++|+|+|.|+ ||.|++++..|.+.|. +++++.|+.+..+...   +++...+   .......|+.+.+++...+
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccccchhhhh
Confidence            46789999999999 7999999999999998 7889999877665543   3444433   2445567898887776654


Q ss_pred             HHHHhcCCCccEEEEcCCC
Q 023438          102 SEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~  120 (282)
                      .       ..|++||+...
T Consensus        89 ~-------~~diiIN~Tp~  100 (182)
T d1vi2a1          89 A-------SADILTNGTKV  100 (182)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------ccceeccccCC
Confidence            4       67999999875

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.4e-06  Score=63.64  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++||+||+|++|.+.++.+...|++|+++++++++.+.. ++    + +..-   ..|.++.+-.+.+.+...  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~----~-Ga~~---vi~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ----N-GAHE---VFNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----T-TCSE---EEETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cc----c-Cccc---ccccccccHHHHhhhhhc--cC
Confidence            578999999999999999999999999999999886654332 22    2 3221   137676554444444332  23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6899999887

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.13  E-value=1.6e-05  Score=60.60  Aligned_cols=76  Identities=17%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++++++++|.|+ |++|..+++.|...|+ ++.++.|+.++.+...+++     +..  +     .+.+++...+.    
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~-----~~~~~~~~~l~----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A-----VRFDELVDHLA----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E-----CCGGGHHHHHH----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--c-----ccchhHHHHhc----
Confidence            689999999998 9999999999999998 6999999988877776655     211  1     22344444443    


Q ss_pred             cCCCccEEEEcCCCCCC
Q 023438          107 QHHQLNILINNAGIMGT  123 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~  123 (282)
                         ..|+||++.+...+
T Consensus        84 ---~~Divi~atss~~~   97 (159)
T d1gpja2          84 ---RSDVVVSATAAPHP   97 (159)
T ss_dssp             ---TCSEEEECCSSSSC
T ss_pred             ---cCCEEEEecCCCCc
Confidence               68999999986544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.07  E-value=1.1e-05  Score=61.98  Aligned_cols=76  Identities=16%  Similarity=0.275  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+|+++|.|+ |.+|..+|+.|++.|++|++++|+.+++++..++    ++  .......+..+.......+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~--~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQ--HSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CT--TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----cc--ccccccccccchhhhHhhhh-------
Confidence            3689999987 9999999999999999999999999886665443    22  34445556666555555443       


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      ..|.++.+..
T Consensus        67 ~~~~~i~~~~   76 (182)
T d1e5qa1          67 KHDLVISLIP   76 (182)
T ss_dssp             TSSEEEECSC
T ss_pred             ccceeEeecc
Confidence            4466665543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.07  E-value=7.1e-06  Score=63.90  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++||+||+|++|.+.++-....|++||.++++.++.+...    + . +....   +|-++++..+.+.+...  ..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~-~-Ga~~v---i~~~~~~~~~~~~~~~~--~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----Q-I-GFDAA---FNYKTVNSLEEALKKAS--PD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-T-TCSEE---EETTSCSCHHHHHHHHC--TT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----h-h-hhhhh---cccccccHHHHHHHHhh--cC
Confidence            5899999999999999999999999999999999876643322    2 2 32222   34454444444444322  23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            6999999998

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=1.5e-05  Score=61.62  Aligned_cols=79  Identities=10%  Similarity=0.151  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|++++|+||+|++|..+++-+...|++|++++++.++.+... ++     +..   ...|.++++-.+++.+ +. ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~---~vi~~~~~d~~~~v~~-~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW---QVINYREEDLVERLKE-IT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHH-HT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe---EEEECCCCCHHHHHHH-Hh-CCC
Confidence            4789999999999999999999999999999999988754433 22     332   1247676544444333 21 234


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus        97 g~d~v~d~~g  106 (179)
T d1qora2          97 KVRVVYDSVG  106 (179)
T ss_dssp             CEEEEEECSC
T ss_pred             CeEEEEeCcc
Confidence            6899999987

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.98  E-value=1.3e-05  Score=62.69  Aligned_cols=86  Identities=16%  Similarity=0.219  Sum_probs=56.9

Q ss_pred             CCEEEE-ecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH-HhcC
Q 023438           31 GLTAIV-TGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY-NIQH  108 (282)
Q Consensus        31 ~~~~lI-tG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i-~~~~  108 (282)
                      |.+++| +||+|++|.+.++-....|++||.+.|+.+..++..+.+++.  +... .+..|-.+..++...++++ ....
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~-vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQ-VITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSE-EEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccE-EEeccccchhHHHHHHHHHHhhcc
Confidence            455555 799999999999999999999999998887777766666554  3322 2222211122233333333 3345


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      +.+|+++.+.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            67999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=1.3e-05  Score=62.22  Aligned_cols=79  Identities=13%  Similarity=0.217  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++||+||+|++|...++.+...|++|++++++.++.+.    +++ . +... .  .|.++++-.+.+.+..  ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~-~-Ga~~-v--i~~~~~~~~~~v~~~t--~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSR-L-GVEY-V--GDSRSVDFADEILELT--DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHT-T-CCSE-E--EETTCSTHHHHHHHHT--TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccc-c-cccc-c--ccCCccCHHHHHHHHh--CCC
Confidence            47899999999999999999999999999999988765432    222 2 3221 1  3555544333333221  123


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.++|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999988

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1.5e-05  Score=61.28  Aligned_cols=77  Identities=17%  Similarity=0.319  Sum_probs=58.2

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..+++||.++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+...+.+.+..   .+..+  +..+.           
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~-----------   75 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL-----------   75 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG-----------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc-----------
Confidence            46789999999998 899999999999999999999999999888777665432   22222  22211           


Q ss_pred             hcCCCccEEEEcCCC
Q 023438          106 IQHHQLNILINNAGI  120 (282)
Q Consensus       106 ~~~g~id~vi~~ag~  120 (282)
                       ...+.|++||+...
T Consensus        76 -~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 -EGHEFDLIINATSS   89 (170)
T ss_dssp             -TTCCCSEEEECCSC
T ss_pred             -cccccceeeccccc
Confidence             12367999999864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.88  E-value=2.4e-05  Score=57.51  Aligned_cols=73  Identities=18%  Similarity=0.250  Sum_probs=56.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      +++|.|+ |.+|+.+++.|.+.|++|++++++++..+...++    +   .+.++.+|.++++.++++      ...+.|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----~---~~~vi~Gd~~~~~~l~~~------~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I---DALVINGDCTKIKTLEDA------GIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C---SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----h---hhhhccCcccchhhhhhc------Chhhhh
Confidence            6889998 9999999999999999999999998776654332    2   367888999998866654      123567


Q ss_pred             EEEEcCC
Q 023438          113 ILINNAG  119 (282)
Q Consensus       113 ~vi~~ag  119 (282)
                      .++....
T Consensus        68 ~vv~~t~   74 (132)
T d1lssa_          68 MYIAVTG   74 (132)
T ss_dssp             EEEECCS
T ss_pred             hhcccCC
Confidence            7777543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.88  E-value=4.3e-05  Score=58.43  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC-
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~-  108 (282)
                      .|.+++|+| +|+||...+..+...|++|+++++++++++...+ +     +.... +..|-. .++.....+.+.... 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~-~~~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVT-LVVDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEE-EECCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEE-Eecccc-ccccchhhhhhhcccc
Confidence            467999997 6899999999999999999999999887544332 2     33322 222322 233444455555544 


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            468999999983

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.85  E-value=0.00047  Score=51.44  Aligned_cols=116  Identities=15%  Similarity=0.167  Sum_probs=75.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      .++++.|+|+ |.+|.++|..|+..|.  +++++|++++.++....++.....  ...+.....|..+            
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~------------   71 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD------------   71 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG------------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH------------
Confidence            4578889997 9999999999999885  799999999887777777765321  2223333333311            


Q ss_pred             hcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                        ..+-|++|.++|......+...+    .+..|    .-+.+...+.+.+..    +.+.++++|.
T Consensus        72 --l~daDvvvitag~~~~~~~~R~d----l~~~N----~~i~~~i~~~i~~~~----p~a~~ivvtN  124 (148)
T d1ldna1          72 --CRDADLVVICAGANQKPGETRLD----LVDKN----IAIFRSIVESVMASG----FQGLFLVATN  124 (148)
T ss_dssp             --TTTCSEEEECCSCCCCTTTCSGG----GHHHH----HHHHHHHHHHHHHHT----CCSEEEECSS
T ss_pred             --hccceeEEEecccccccCcchhH----HHHHH----HHHHHHHHHHHHhhC----CCceEEEecC
Confidence              23679999999976543322222    23333    334666666666652    4567777776

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.84  E-value=3.5e-05  Score=59.34  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=60.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +..+++|+++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+...+.+....   ++..+..|-.             
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~~~~~-------------   75 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQAVSMDSI-------------   75 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGGGC-------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc---ccchhhhccc-------------
Confidence            46788999999988 888999999999988899999999999888888775432   3444444321             


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                       ...+.|++||+....
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             134789999998753

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=6.9e-05  Score=58.00  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc-
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~-  107 (282)
                      .|.+++|+|+ |+||...+..+...|+ +|+++++++++++.. +++     +... ++  |.++. +..+..+.+.+. 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-vi--~~~~~-~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADL-TL--NRRET-SVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSE-EE--ETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceE-EE--ecccc-chHHHHHHHHHhh
Confidence            5899999997 8999999999999998 799999998876433 332     3322 22  44332 222222333322 


Q ss_pred             -CCCccEEEEcCCC
Q 023438          108 -HHQLNILINNAGI  120 (282)
Q Consensus       108 -~g~id~vi~~ag~  120 (282)
                       ...+|++|.++|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence             1258999999984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=2.9e-05  Score=51.38  Aligned_cols=42  Identities=24%  Similarity=0.306  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      ++.+++|+||+||+|....+-+...|++|+.+.++.++.+..
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            678999999999999999998889999999999988775443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.70  E-value=0.00045  Score=51.39  Aligned_cols=116  Identities=13%  Similarity=0.135  Sum_probs=70.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.+++.|+|+ |.+|.++|..|+..|  .+|+++|++++..+....++..... .........|.   +       +   
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-------~---   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-------D---   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-------G---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-------H---
Confidence            3467888896 999999999999988  4899999998877766666654211 12233334443   2       1   


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                       ..+-|++|.+||...... .+.   .+.+..|.    .+.+...+.+.+.    ++++.++++|.
T Consensus        70 -~~~adivvitag~~~~~g-~~r---~~l~~~N~----~i~~~~~~~i~~~----~p~aivivvtN  122 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKPG-ESR---LDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAAN  122 (146)
T ss_dssp             -GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             -hccccEEEEecccccCCC-CCH---HHHHHHHH----HHHHHHHHHHhhc----CCCcEEEEeCC
Confidence             126799999999654321 121   22234443    4466666666664    24566666665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.70  E-value=0.00036  Score=51.94  Aligned_cols=118  Identities=15%  Similarity=0.130  Sum_probs=73.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |++.|+|+ |.+|.++|..|+..|.  ++++++.+++.++....++.....  .........|.   ++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            67888895 9999999999999884  899999999887766666665321  22223333332   21           


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ..+-|++|.+||......+..-.+-.+.++.|    ..+++.+.+.+.+.    ++.+-++++|.
T Consensus        67 l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~----~p~aivivvtN  123 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKES----GFHGVLVVISN  123 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             hccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhc----CCCeEEEEecC
Confidence            12679999999975432211111112223444    34567777777765    24567777776

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.69  E-value=8e-05  Score=57.12  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|++++|+||+|++|...++.+...|++|+.++++.++.+... ++     +....   .|..+   ..   +++.. ..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l-----Ga~~~---i~~~~---~~---~~~~~-~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEEA---ATYAE---VP---ERAKA-WG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSEE---EEGGG---HH---HHHHH-TT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc-----cccee---eehhh---hh---hhhhc-cc
Confidence            6789999999999999999999999999999999877655433 22     33221   23322   11   22222 34


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+++.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            6999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.63  E-value=3.5e-05  Score=59.63  Aligned_cols=78  Identities=21%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++||+||+||+|.+.++-+...|++|+.++++.++.+... ++     +.....   |-++.  ..+..+.+  ..+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l-----Ga~~vi---~~~~~--~~~~~~~~--~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEVL---AREDV--MAERIRPL--DKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEEE---ECC-----------C--CSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc-----ccceee---ecchh--HHHHHHHh--hcc
Confidence            5789999999999999999999999999999999887754432 22     333221   33221  22222221  234


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|+++.+.|.
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            79999999983

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.63  E-value=0.00077  Score=49.95  Aligned_cols=115  Identities=17%  Similarity=0.193  Sum_probs=69.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      .+.|+||+|.+|.++|..|+..|.  ++++++.++...+  ...+...   ........-+. ..+..+.++       +
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~---~~~~~~~~~~~-~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI---ETRATVKGYLG-PEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS---SSSCEEEEEES-GGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh---hhhcCCCeEEc-CCChHHHhC-------C
Confidence            578999999999999999999986  7999998764322  2233221   11222222222 233333222       6


Q ss_pred             ccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       111 id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      -|++|..||......+ +..+   .++.|..-    ++...+.+.+.    ++.+.++++|.
T Consensus        69 aDivVitag~~~~~g~-sR~~---ll~~N~~i----~~~i~~~i~~~----~p~~iiivvtN  118 (144)
T d1mlda1          69 CDVVVIPAGVPRKPGM-TRDD---LFNTNATI----VATLTAACAQH----CPDAMICIISN  118 (144)
T ss_dssp             CSEEEECCSCCCCTTC-CGGG---GHHHHHHH----HHHHHHHHHHH----CTTSEEEECSS
T ss_pred             CCEEEECCCcCCCCCC-Ccch---HHHHHHHH----HHHHHHHHHhc----CCCeEEEEecC
Confidence            7999999997544322 3333   35555544    56666666665    24567777776

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.59  E-value=0.0002  Score=54.53  Aligned_cols=80  Identities=15%  Similarity=0.126  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|+|++|++|..++..+...|+ .|+++++++++.+... ++     +.. ..  .|.++.+..+.+.+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-----Ga~-~~--i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD-YV--INASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS-EE--EETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-----CCc-ee--eccCCcCHHHHHHHHh--hc
Confidence            468999999999999999999999996 8999998877644433 22     332 22  2445544444444332  12


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|+++.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            358999999983

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.00053  Score=52.19  Aligned_cols=81  Identities=20%  Similarity=0.204  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.. +++     +... ++..+-.+..+..+.++.-  ..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~-----Ga~~-~~~~~~~~~~~~~~~~~~~--~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI-----GADL-VLQISKESPQEIARKVEGQ--LG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSE-EEECSSCCHHHHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh-----CCcc-ccccccccccccccccccc--CC
Confidence            4678999987 9999999999999999 799999998876543 232     3322 2323333444444433332  22


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            468999999983

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=0.0012  Score=49.74  Aligned_cols=119  Identities=14%  Similarity=0.139  Sum_probs=76.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      -.++...+.|+|+ |.+|.++|..|+..|.  ++++++++.+.+......+.....  +........|..+         
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~---------   84 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV---------   84 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh---------
Confidence            3455667888896 9999999999999885  799999998887777777765321  1122222233321         


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                           ..+-|++|.+||......+ +..++   ++.|    ..+.+...+.+.+.    +..+.++++|.
T Consensus        85 -----~~~adivvitag~~~~~~~-~R~dl---l~~N----~~i~~~i~~~i~~~----~p~~ivivvtN  137 (159)
T d2ldxa1          85 -----SANSKLVIITAGARMVSGQ-TRLDL---LQRN----VAIMKAIVPGVIQN----SPDCKIIVVTN  137 (159)
T ss_dssp             -----GTTEEEEEECCSCCCCTTT-CSSCT---THHH----HHHHHHHTTTHHHH----STTCEEEECSS
T ss_pred             -----hccccEEEEecccccCCCC-CHHHH---HHHH----HHHHHHHHHHHhcc----CCCeEEEEeCC
Confidence                 1367999999997554332 22222   2323    33466666666665    24677777776

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.56  E-value=0.0028  Score=47.63  Aligned_cols=119  Identities=15%  Similarity=0.056  Sum_probs=77.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEEccCCCHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ..+..+.+.|+|+ |.+|.++|..|+..|.  +++++|++++........+.....  .........|..+         
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~---------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV---------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh---------
Confidence            4455678888896 9999999999999996  899999998887766666654211  1122222223322         


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                           ..+-|++|.+||...... .+..+   .+..|.    .+++...+.+.+.    ++.+-++++|.
T Consensus        86 -----~~~adiVVitAg~~~~~g-~tR~~---l~~~N~----~i~~~i~~~i~~~----~p~aiiivvtN  138 (160)
T d1i0za1          86 -----TANSKIVVVTAGVRQQEG-ESRLN---LVQRNV----NVFKFIIPQIVKY----SPDCIIIVVSN  138 (160)
T ss_dssp             -----GTTCSEEEECCSCCCCTT-CCGGG---GHHHHH----HHHHHHHHHHHHH----CTTCEEEECSS
T ss_pred             -----cccccEEEEecCCccccC-cchHH---HHHHHH----HHHHHHHHHHHhc----CCCcEEEEeCC
Confidence                 126799999999754432 23222   233333    4577777777775    24567777776

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.54  E-value=0.00081  Score=50.43  Aligned_cols=122  Identities=16%  Similarity=0.068  Sum_probs=72.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC--CCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +.+++.|+|+ |.+|..+|..|+..|. ++++++.+++.++.....+....  .+.......  -++.   +..++    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~---~~~~~----   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSY---EAALT----   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSH---HHHHT----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCch---hhhhc----
Confidence            5578888997 9999999999998885 89999999887776666665421  111111111  1111   11111    


Q ss_pred             cCCCccEEEEcCCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          107 QHHQLNILINNAGIMGTPFMLSK-DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                         +-|++|.++|....+.+.+. ..-.+.+..|..    +++...+.+.+.    ++.+.++++|.
T Consensus        76 ---~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~----~p~aiviivsN  131 (154)
T d1pzga1          76 ---GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKY----CPKTFIIVVTN  131 (154)
T ss_dssp             ---TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECCS
T ss_pred             ---CCCeEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhc----CCCcEEEEeCC
Confidence               67999999997654322111 111222444443    455666666655    24566776665

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=3.7e-05  Score=61.80  Aligned_cols=78  Identities=21%  Similarity=0.254  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecC----------------CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccC
Q 023438           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (282)
Q Consensus        28 ~~~~~~~lItG~----------------s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dv   91 (282)
                      +|+|+++|||+|                ||..|.+||+++..+|++|.++......          .. ...+..+  .+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~-p~~~~~~--~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PT-PPFVKRV--DV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CC-CTTEEEE--EC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Cc-ccccccc--ee
Confidence            688999999987                6889999999999999999988754321          11 1233333  44


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcCCCC
Q 023438           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus        92 s~~~~i~~~~~~i~~~~g~id~vi~~ag~~  121 (282)
                      ...++....+.   +.....|++|++|.+.
T Consensus        70 ~t~~~m~~~~~---~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 MTALEMEAAVN---ASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CSHHHHHHHHH---HHGGGCSEEEECCBCC
T ss_pred             hhhHHHHHHHH---hhhccceeEeeeechh
Confidence            44454444433   3334679999999964

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=9.5e-05  Score=57.53  Aligned_cols=79  Identities=16%  Similarity=0.147  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEE-EEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vi-i~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++|||+||+||+|...++-+...|++++ .++++.++.....+++     +..   ...|..+++ +.+.++++..  
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~~-~~~~~~~~~~--   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTGN-VAEQLREACP--   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSSC-HHHHHHHHCT--
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccchh-HHHHHHHHhc--
Confidence            348999999999999999999888999654 4566655544444333     222   223665533 4444444432  


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      ..+|+++.+.|
T Consensus        99 ~GvDvv~D~vG  109 (187)
T d1vj1a2          99 GGVDVYFDNVG  109 (187)
T ss_dssp             TCEEEEEESSC
T ss_pred             cCceEEEecCC
Confidence            36999999987

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.50  E-value=0.00011  Score=53.67  Aligned_cols=73  Identities=12%  Similarity=0.074  Sum_probs=54.4

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |.++|.|+ |-+|+++|+.|.+.|++|++++.+++..++..    +    .....+.+|.++++.++++  .+    .+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~----~~~~~~~gd~~~~~~l~~a--~i----~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S----YATHAVIANATEENELLSL--GI----RNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----T----TCSEEEECCTTCTTHHHHH--TG----GGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----H----hCCcceeeecccchhhhcc--CC----ccc
Confidence            56778877 89999999999999999999999987755542    2    2345677899998876654  11    256


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77777665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=0.0019  Score=47.48  Aligned_cols=113  Identities=18%  Similarity=0.226  Sum_probs=72.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.|+|+ |.+|.++|..|+..|.  +++++|.+++.++....++....+ .........|.   ++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            4667786 8999999999998884  899999998887766666655321 12233333232   21           12


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      +-|++|.+||....... +..   +.+..|    ..+.+...+.+.+..    +.+.++++|.
T Consensus        67 ~adivvitag~~~~~g~-~r~---dl~~~N----~~I~~~i~~~i~~~~----p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPGE-TRL---QLLGRN----ARVMKEIARNVSKYA----PDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCSSC-CHH---HHHHHH----HHHHHHHHHHHHHHC----TTCEEEECSS
T ss_pred             CCCEEEEecccccCCCc-chh---hhhccc----cchHHHHHHHHHhcC----CCcEEEEeCC
Confidence            67999999997544322 222   223334    345677777777652    4567777665

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.45  E-value=0.003  Score=46.50  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=70.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcC--hhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRD--IAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~--~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++.|+|++|.+|.++|..|+..|.  ++++++.+  .+..+....++....+ .........|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999986  79999854  3334434444443111 22333333332   21           


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ..+-|++|.+||....+. .+-   .+.++.|    ..+++...+.+.+.    ++++.++.+|.
T Consensus        68 ~~~aDiVvitaG~~~~~g-~~R---~dl~~~N----~~I~~~i~~~i~~~----~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG-QTR---IDLAGDN----APIMEDIQSSLDEH----NDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT-CCH---HHHHHHH----HHHHHHHHHHHHTT----CSCCEEEECCS
T ss_pred             hhhcCEEEEecccccccC-Cch---hhHHHHH----HHHHHHHHHHHHhc----CCCceEEEecC
Confidence            126799999999754432 222   2334444    34577777777765    24567777765

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.38  E-value=0.00023  Score=54.73  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEE-ccCCCHHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME-LDLSSLASVRNFASEYN  105 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~-~Dvs~~~~i~~~~~~i~  105 (282)
                      .+++||.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+...........+. .|+.             
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~-------------   78 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLD-------------   78 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTT-------------
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhh-------------
Confidence            4589999999988 789999999998777 99999999999999888887654322111111 1121             


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                      ....+.|++|++....
T Consensus        79 ~~~~~~dliIn~tp~g   94 (177)
T d1nvta1          79 VDLDGVDIIINATPIG   94 (177)
T ss_dssp             CCCTTCCEEEECSCTT
T ss_pred             hccchhhhhccCCccc
Confidence            1234678999998753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.37  E-value=0.00029  Score=54.08  Aligned_cols=79  Identities=15%  Similarity=0.104  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |+||...++.+...|+ +|+++++++++.+.. +++     +.. .+  +|.++.+..+.+.+.. . .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l-----Ga~-~~--i~~~~~~~~~~v~~~t-~-g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY-----GAT-DI--LNYKNGHIEDQVMKLT-N-G   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH-----TCS-EE--ECGGGSCHHHHHHHHT-T-T
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh-----Ccc-cc--ccccchhHHHHHHHHh-h-c
Confidence            5788999986 8999999999999998 699999988775444 333     322 12  3555433333333332 1 2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            259999999984

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.36  E-value=0.0056  Score=45.12  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=67.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChh--hHHHHHHHHHHhCC--C--CceeEEEccCCCHHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIA--AGKDVKETIVKEIP--S--AKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~--~~~~~~~~l~~~~~--~--~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+.|+||+|.+|.++|..|+..|.  +++++++++.  .++....++.....  .  .++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            488999999999999999999994  8999998753  33444444543211  1  122222211  111         


Q ss_pred             HhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                        ...+-|++|.+||......+ +..   +.++.|..    +++...+.+.+.     ....|+.+|.
T Consensus        71 --~l~~aDvVVitAG~~~~~g~-sR~---dl~~~Na~----iv~~i~~~i~~~-----~~~~iivVtN  123 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRKEGM-SRM---DLAKTNAK----IVGKYAKKIAEI-----CDTKIFVITN  123 (145)
T ss_dssp             --GGTTCSEEEECCSCCCCTTC-CHH---HHHHHHHH----HHHHHHHHHHHH-----CCCEEEECSS
T ss_pred             --HhccceEEEEecccccCCCC-Chh---hhhhhhHH----HHHHHHHHHhcc-----CCCeEEEEcC
Confidence              12367999999997544322 322   23444443    466666666654     2334555544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.34  E-value=0.0051  Score=45.22  Aligned_cols=113  Identities=14%  Similarity=0.114  Sum_probs=69.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC-CCceeEE-EccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAM-ELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~-~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+.|+|+ |.+|.++|..|+..|.  ++++++.+++..+.....+..... ....... ..|..+              .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~--------------~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI--------------C   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG--------------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH--------------h
Confidence            5677796 9999999999999886  899999998877666666654211 0111222 222211              1


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      .+-|++|.+||...... .+..   +.+..|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        68 ~daDvVVitaG~~~~~g-~~R~---dl~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQKPG-QSRL---ELVGATV----NILKAIMPNLVKV----APNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCCTT-CCHH---HHHHHHH----HHHHHHHHHHHHH----CTTSEEEECCS
T ss_pred             hCCcEEEEecccccCCC-Cchh---hhhhhhH----HHHHHHHHHHHhh----CCCeEEEEeCC
Confidence            25699999999754432 2222   2344444    4566666666665    24566666665

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.30  E-value=0.00048  Score=52.39  Aligned_cols=45  Identities=16%  Similarity=0.322  Sum_probs=39.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l   75 (282)
                      +++.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6789999988 9999999999999997 7999999998877665544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.28  E-value=0.0011  Score=49.33  Aligned_cols=84  Identities=14%  Similarity=0.077  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ++.+-+++.|+||.|-+|..+|+.|.+.|++|.+.+|+.....+...   +   +..+..+..+   ...+...+.++..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~---~~~~v~~~~~---~~~~~~v~~~~~~   75 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---A---NADVVIVSVP---INLTLETIERLKP   75 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---T---TCSEEEECSC---GGGHHHHHHHHGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---h---hccccccccc---hhhheeeeecccc
Confidence            33445899999999999999999999999999999998766544322   1   3344444333   3556666666655


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ...+=.+++..++
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            4433335555554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.26  E-value=0.0006  Score=52.10  Aligned_cols=79  Identities=15%  Similarity=0.164  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+ +     +....   .|..+ .+.+....+...  
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~~~---i~~~~~~~~~~~~~~~~~--   95 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GATEC---VNPQDYKKPIQEVLTEMS--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSEE---ECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCeeE---EecCCchhHHHHHHHHHh--
Confidence            5789999999 7899999999999996 89999999887554432 2     32211   12222 233455545443  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|-+.|.
T Consensus        96 ~~G~D~vid~~G~  108 (176)
T d2jhfa2          96 NGGVDFSFEVIGR  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCCCEEEecCCc
Confidence            2478999999984

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.23  E-value=0.0011  Score=50.27  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+ |++|...++.+...|++|++++++.++++.. +++     +.... +  |..+..+..      +...+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l-----Ga~~~-i--~~~~~~~~~------~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM-----GADHY-I--ATLEEGDWG------EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH-----TCSEE-E--EGGGTSCHH------HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc-----CCcEE-e--eccchHHHH------Hhhhc
Confidence            5789999987 8999999988888999999999998876543 333     43322 2  222211111      12234


Q ss_pred             CccEEEEcCCCC
Q 023438          110 QLNILINNAGIM  121 (282)
Q Consensus       110 ~id~vi~~ag~~  121 (282)
                      .+|+++.+++..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            689999988753

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.19  E-value=0.00019  Score=54.86  Aligned_cols=42  Identities=31%  Similarity=0.409  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      ++.++||+||+||+|.+.++-....|++||.++++.++.+..
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            567899999999999999999889999999999988775543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.18  E-value=0.0025  Score=47.53  Aligned_cols=117  Identities=11%  Similarity=0.072  Sum_probs=65.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC---------EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGV---------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~---------~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~  103 (282)
                      .+.|+||+|.+|.+++..|+..+.         +++..+++.+.++....++.... ......+...-.+    ..    
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~----   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDP----KV----   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCH----HH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCch----hh----
Confidence            899999999999999999998653         22223344444444444443321 1123333322111    11    


Q ss_pred             HHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       104 i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                         ...+.|++|.++|....+. .+.+++   +..|    ..+++.+.+.+.+..+   +.+.|+++|.
T Consensus        77 ---~~~~advViitaG~~~~pg-~~r~dl---~~~N----~~i~~~~~~~i~k~a~---~~~~vivvsN  131 (154)
T d1y7ta1          77 ---AFKDADYALLVGAAPRKAG-MERRDL---LQVN----GKIFTEQGRALAEVAK---KDVKVLVVGN  131 (154)
T ss_dssp             ---HTTTCSEEEECCCCCCCTT-CCHHHH---HHHH----HHHHHHHHHHHHHHSC---TTCEEEECSS
T ss_pred             ---hcccccEEEeecCcCCCCC-CcHHHH---HHHH----HHHHHHHHHHHHHhCC---CCcEEEEecC
Confidence               1237899999999764432 233332   3334    3456667777666421   2345666665

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.001  Score=50.41  Aligned_cols=74  Identities=16%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+ |+||...++.+...|+++++++++.++.+ ..+++     +...   ..|..+.+...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l-----Gad~---~i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL-----GADE---VVNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH-----TCSE---EEETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc-----CCcE---EEECchhhHHH-------HhcC
Confidence            4789999986 89999999988899999999999887754 33444     3332   13555544322       2224


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      .+|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999984

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.18  E-value=0.0016  Score=49.00  Aligned_cols=83  Identities=17%  Similarity=0.089  Sum_probs=54.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHH--------HhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV--------KEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~--------~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++.|.|. |-+|.++|+.|.+.|++|++.+|+.+..+...+.-.        +.....++.++..   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3667765 999999999999999999999999877665443210        1111223333322   356788888888


Q ss_pred             HhcCCCccEEEEcCC
Q 023438          105 NIQHHQLNILINNAG  119 (282)
Q Consensus       105 ~~~~g~id~vi~~ag  119 (282)
                      .....+=.+++..++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766544456666554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00028  Score=54.35  Aligned_cols=43  Identities=23%  Similarity=0.287  Sum_probs=37.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~   71 (282)
                      .++.++||+||+||+|...++-....|++||.++++.++.+..
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            3456899999999999999999999999999999998875443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.14  E-value=0.0028  Score=46.64  Aligned_cols=113  Identities=17%  Similarity=0.160  Sum_probs=65.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCCC-CceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .+.|+|+ |.+|.++|..|+.+|.  +++++|++++.++....++....+- ........   +.+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            4566687 9999999999999886  7999999988766666666543211 11221111   111           123


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      +-|++|.+||...... .+.   .+.+..|.    .+++.+.+.+.+.    ++++.++++|.
T Consensus        68 ~adivvitag~~~~~~-~~r---~~l~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPG-ETR---LDLAKKNV----MIAKEVTQNIMKY----YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC-------CH---HHHHHHHH----HHHHHHHHHHHHH----CCSCEEEECSS
T ss_pred             CCceEEEecccccCcC-cch---hHHhhHHH----HHHHHHHHHhhcc----CCCceEEEecC
Confidence            6799999999654322 122   23344444    4566667777665    24566777765

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.11  E-value=0.0011  Score=50.49  Aligned_cols=79  Identities=11%  Similarity=0.114  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ ||+|...++.+...|+ .|+++++++++. +..+++     +..- ++  |..+ .+.+.+.++...  
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~l-----Ga~~-~i--~~~~~~~~~~~~~~~~~--   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEF-----GATE-CI--NPQDFSKPIQEVLIEMT--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHH-----TCSE-EE--CGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHh-----CCcE-EE--eCCchhhHHHHHHHHHc--
Confidence            5789999998 6999999999999997 566677776664 334444     3222 22  3322 234455444432  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|.++|.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence            3469999999983

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.10  E-value=0.0019  Score=48.53  Aligned_cols=76  Identities=16%  Similarity=0.135  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+++|.|+ |++|...+.-+...|++|+++++++++++... ++     +.. .+  .|.++.+..+.+.+.    .+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~-----Ga~-~~--i~~~~~~~~~~~~~~----~~   92 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL-----GAS-LT--VNARQEDPVEAIQRD----IG   92 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHHH----HS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc-----Ccc-cc--ccccchhHHHHHHHh----hc
Confidence            4789999886 99999999988899999999999987755432 22     322 22  355554444444332    23


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      ..+.+|-+++
T Consensus        93 g~~~~i~~~~  102 (166)
T d1llua2          93 GAHGVLVTAV  102 (166)
T ss_dssp             SEEEEEECCS
T ss_pred             CCcccccccc
Confidence            4555555555

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.09  E-value=0.0038  Score=47.37  Aligned_cols=42  Identities=29%  Similarity=0.251  Sum_probs=36.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   73 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~   73 (282)
                      .|++.|.|+ |.+|.++|..|++.|++|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999999 999999999999999999999999877665443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.08  E-value=0.0009  Score=51.05  Aligned_cols=78  Identities=10%  Similarity=0.098  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |+||...+..+...|++ |+++++++.+++.. +++     +.. .+  .|.++.+ +.+.++++.  .
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~-----Ga~-~~--i~~~~~~-~~~~i~~~t--~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GAT-HV--INSKTQD-PVAAIKEIT--D   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCS-EE--EETTTSC-HHHHHHHHT--T
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc-----CCe-EE--EeCCCcC-HHHHHHHHc--C
Confidence            4789999987 89999999999899986 45566766554443 333     322 22  3555533 333333332  2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|++|.++|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            479999999983

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0013  Score=49.00  Aligned_cols=76  Identities=16%  Similarity=0.098  Sum_probs=57.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCcc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id  112 (282)
                      .++|.|. |-+|..++++|.++|.+|++++.+++......++...    ..+.++.+|.++++.++++-      ..+.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcchHHHHHhc------cccCC
Confidence            4677777 7999999999999999999999988766655555432    35888999999987665531      12567


Q ss_pred             EEEEcCC
Q 023438          113 ILINNAG  119 (282)
Q Consensus       113 ~vi~~ag  119 (282)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8887764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.05  E-value=0.0092  Score=44.14  Aligned_cols=119  Identities=15%  Similarity=0.110  Sum_probs=72.2

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHh--CCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~--~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ..+.|+|+ |.+|.++|..|...+. +++++|++++..+.....+...  ...........|  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            46777895 9999999998888885 8999999887776666655432  112223333222  111           12


Q ss_pred             CCccEEEEcCCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          109 HQLNILINNAGIMGTPFMLSK-DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      .+-|++|.++|....+.+.+. .+-.+.+..|.    .+.+.+.+.+.+.    ++.+.++++|.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~----~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKN----CPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHH----CTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhc----CCCeEEEEecC
Confidence            367999999997644322211 11222344443    4566677777665    24567777776

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.04  E-value=0.0018  Score=49.50  Aligned_cols=79  Identities=14%  Similarity=0.123  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ ||+|...+..+...|+ +||.+++++++++... ++     +....+   |..+.+. .+.+.+...  
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~-----GA~~~i---n~~~~~~~~~~~~~~~~--   96 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV-----GATECI---SPKDSTKPISEVLSEMT--   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH-----TCSEEE---CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc-----CCcEEE---CccccchHHHHHHHHhc--
Confidence            5789999986 9999999999999996 8999999998866443 33     433222   3333222 232322221  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            2369999999983

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.03  Score=40.95  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=67.5

Q ss_pred             EEEEecCCChhHHHHHHHHHH-cC--CEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           33 TAIVTGATSGIGTETARVLAL-RG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~-~G--~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.|+|++|.+|.++|..|+. .+  .++.+++..+ ..+.....+........... ...-.+.+   . ++       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~---~-~~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATP---A-LE-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHH---H-HT-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCcc---c-cC-------
Confidence            578999999999999998864 34  5899999764 34444445544311111111 12222222   1 11       


Q ss_pred             CccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       110 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      +-|++|.+||....+.+ +-.+   .+..|.    .+++...+.+.+..    +++.++++|.
T Consensus        69 ~aDvvvitaG~~~k~g~-~R~d---l~~~N~----~i~~~v~~~i~~~~----p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKPGM-DRSD---LFNVNA----GIVKNLVQQVAKTC----PKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCTTC-CGGG---GHHHHH----HHHHHHHHHHHHHC----TTSEEEECSS
T ss_pred             CCCEEEECCCccCCCCc-chhh---HHHHHH----HHHHHHHHHHHhhC----CCcEEEEccC
Confidence            56999999997644322 3333   245553    34566666666652    4567777776

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.01  E-value=0.015  Score=42.57  Aligned_cols=113  Identities=13%  Similarity=0.084  Sum_probs=69.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhCC--CCceeEEE-ccCCCHHHHHHHHHHHHhc
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAME-LDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~~--~~~v~~~~-~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+.|+|+ |.+|.++|..|+..|.  +++++|.+++..+.....+....+  ........ .|..+              
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------
Confidence            4667786 9999999999998885  799999998887666656654211  11122222 23221              


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ..+-|++|..||....+.. +..   +.+..    ...+.+...+.+.+.    ++.+.++++|.
T Consensus        67 ~~~adiVvitag~~~~~g~-~r~---~l~~~----n~~i~~~i~~~i~~~----~p~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKPGM-TRL---DLAHK----NAGIIKDIAKKIVEN----APESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCSSC-CHH---HHHHH----HHHHHHHHHHHHHTT----STTCEEEECSS
T ss_pred             hccccEEEEeccccCCCCC-chH---HHHHH----hhHHHHHHHHHHHhh----CCCcEEEEecC
Confidence            1267899999996544321 222   22333    334566666776664    24566666665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.99  E-value=0.012  Score=42.95  Aligned_cols=114  Identities=20%  Similarity=0.158  Sum_probs=67.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHHHhC--CCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++.|+|+ |.+|.+++..|+..|.  +++++|.+++.++.....+....  ..........  .+.++           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677796 9999999999999984  89999999877665544443211  0112222221  12221           2


Q ss_pred             CCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       109 g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      .+.|++|.+||......+ +..   +.++.|.    .+++...+.+.+.    ++.+-++++|.
T Consensus        68 ~dadvvvitag~~~~~g~-~r~---~l~~~N~----~i~~~i~~~i~~~----~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPGM-TRE---DLLMKNA----GIVKEVTDNIMKH----SKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTTC-CHH---HHHHHHH----HHHHHHHHHHHHH----CSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCCC-chH---HHHHHHH----HHHHHHHHHhhcc----CCCeEEEEecC
Confidence            367999999997544322 211   2233333    3456666666654    24566666665

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.98  E-value=0.0012  Score=46.62  Aligned_cols=39  Identities=13%  Similarity=0.246  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++++||+++|.|+ |.+|..-++.|++.|++|++++....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            5789999999999 67999999999999999999886643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.89  E-value=0.011  Score=43.26  Aligned_cols=114  Identities=16%  Similarity=0.145  Sum_probs=67.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhC--CCCceeEE-EccCCCHHHHHHHHHHHHhc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAM-ELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~--~~~~v~~~-~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      |++.|+|+ |.+|.++|..|+..+. ++++++.+++..+.....+....  ........ ..|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            56777786 9999999999998885 89999988877666555553210  01112122 122221              


Q ss_pred             CCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       108 ~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                      ..+-|++|.+||....+.. +..   +.+..|.    .+++...+.+.+.    ++.+.++++|.
T Consensus        67 ~~~advvvitag~~~~~~~-~r~---dl~~~N~----~i~~~i~~~i~k~----~p~aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKPGM-SRE---DLIKVNA----DITRACISQAAPL----SPNAVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGG----CTTCEEEECSS
T ss_pred             hcCCCEEEEeeeccCCcCc-chh---HHHhHHH----HHHHHHHHHHhcc----CCCceEEEeCC
Confidence            1267899999997543222 222   2233343    4677777777765    24566666665

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.00061  Score=46.41  Aligned_cols=38  Identities=18%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      +++||+++|.|. |.-|.++|+.|.+.|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 77899999999999999999997644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.83  E-value=0.0036  Score=47.33  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |++|...+..+...|+ .|+++++++++++... +    . +.. .++  |.++ +.++...+...  .
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~----~-ga~-~~i--~~~~-~~~~~~~~~~~--~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R----L-GAD-HVV--DARR-DPVKQVMELTR--G   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H----T-TCS-EEE--ETTS-CHHHHHHHHTT--T
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-h----c-ccc-eee--cCcc-cHHHHHHHhhC--C
Confidence            4689999886 9999999999988897 6777788876544332 2    2 222 222  3333 34444444322  2


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            359999999983

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.81  E-value=0.0022  Score=48.84  Aligned_cols=79  Identities=15%  Similarity=0.147  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHH-HHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-SVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~-~i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ ||+|...+..+...|+ +|+++++++++++... ++     +... +  .|.++.+ .+.+..+..  .
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l-----Ga~~-~--i~~~~~d~~~~~~~~~~--~   94 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-C--LNPKDYDKPIYEVICEK--T   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHH--T
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc-----CCcE-E--EcCCCchhHHHHHHHHh--c
Confidence            5789999986 9999999999999997 7889999888765543 22     3221 2  2433322 233333332  2


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|-++|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            2469999999984

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.77  E-value=0.00036  Score=54.84  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=37.3

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      +++|++++|-| .|.+|..+|+.|.+.|++|++.+.+......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            68999999998 5889999999999999999999988766544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.77  E-value=0.019  Score=43.52  Aligned_cols=118  Identities=10%  Similarity=-0.001  Sum_probs=65.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC---C----EEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRG---V----HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G---~----~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      -+|.||||+|.||.+++-.|++.+   .    .+.+++...  ..++....++..... .....+.. -++..       
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~-~~~~~-------   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI-GIDPY-------   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE-ESCHH-------
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccc-cccch-------
Confidence            479999999999999999999743   2    444555443  233444444443221 11111111 11211       


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                         +.+.+.|++|..+|....+. .+.++   .+..|    ..+++...+.+.+..+   +...|+.++.
T Consensus        96 ---~~~~~aDvVvi~ag~~rkpg-~tR~D---ll~~N----~~I~k~~~~~i~~~a~---~~~~vlvv~N  151 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRGPG-MERAA---LLDIN----GQIFADQGKALNAVAS---KNVKVLVVGN  151 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCCTT-CCHHH---HHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSS
T ss_pred             ---hhccCCceEEEeeccCCCCC-CcHHH---HHHHH----HHHHHHHHHHHHhhCC---CCcEEEEecC
Confidence               12337899999999764432 23333   34444    3456777777776421   2345666664

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0019  Score=50.14  Aligned_cols=45  Identities=24%  Similarity=0.188  Sum_probs=39.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~   77 (282)
                      |++.|.|+ |-+|..||..++..|++|++.+++++.++...+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            78999999 8899999999999999999999999888777666544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.69  E-value=0.0093  Score=45.19  Aligned_cols=85  Identities=16%  Similarity=0.156  Sum_probs=59.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH---------------HHHhCCCCceeEEEccCCCHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---------------IVKEIPSAKVDAMELDLSSLAS   96 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~---------------l~~~~~~~~v~~~~~Dvs~~~~   96 (282)
                      ..|-|+|- |-+|.++|+.|++.|++|++.+|+.++.++..++               +.+..  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            45777777 9999999999999999999999999887776443               11221  123344456667777


Q ss_pred             HHHHHHHHHhcCCCccEEEEcCC
Q 023438           97 VRNFASEYNIQHHQLNILINNAG  119 (282)
Q Consensus        97 i~~~~~~i~~~~g~id~vi~~ag  119 (282)
                      +....+.+.....+=+++|.+..
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHhccccCcEEEecCc
Confidence            88877777655444456666653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.68  E-value=0.004  Score=47.35  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCC-HHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~i~~~~~~i~~~  107 (282)
                      .|.+++|+|+ |+||...+..+...|+ .|+++++++++++- .+++     +... .+  |... ++..+...+...  
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~-----Ga~~-~i--~~~~~~~~~~~~~~~~~--   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL-----GATD-CL--NPRELDKPVQDVITELT--   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT-----TCSE-EE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh-----CCCc-cc--CCccchhhhhhhHhhhh--
Confidence            5789999975 9999999999999998 67788888776433 3333     3222 22  2222 223344444332  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|++|-++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3479999999993

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.66  E-value=0.006  Score=46.87  Aligned_cols=44  Identities=20%  Similarity=0.093  Sum_probs=38.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV   76 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~   76 (282)
                      |++.|.|+ |-+|..+|..++..|++|++.+++.+.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            67889999 889999999999999999999999988776655544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.60  E-value=0.0024  Score=49.65  Aligned_cols=79  Identities=18%  Similarity=0.176  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++... ++     +..  .+ .|-.+ +++.+.+.++. ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~-----Ga~--~~-~~~~~-~~~~~~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GFE--IA-DLSLD-TPLHEQIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCE--EE-ETTSS-SCHHHHHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc-----ccc--EE-EeCCC-cCHHHHHHHHh-CC
Confidence            5789999986 8999888888888888 7888898877654432 22     322  22 24344 33333333332 22


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      ..+|++|.+.|.
T Consensus        93 ~g~D~vid~vG~  104 (195)
T d1kola2          93 PEVDCAVDAVGF  104 (195)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCcEEEEECccc
Confidence            368999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.55  E-value=0.0044  Score=46.40  Aligned_cols=40  Identities=18%  Similarity=0.116  Sum_probs=34.3

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      .|.+++|.|+ |+||...+..+...|++|+++++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            4688999875 999999999999999999999998877554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0043  Score=49.85  Aligned_cols=81  Identities=12%  Similarity=0.267  Sum_probs=56.4

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++++|+|.|+ ||+|..++..|+..|. ++.++|.+.=                   +.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            67899999996 8999999999999998 7889874421                   3455666677777766666665


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcC
Q 023438           89 LDLSSLASVRNFASEYNIQHHQLNILINNA  118 (282)
Q Consensus        89 ~Dvs~~~~i~~~~~~i~~~~g~id~vi~~a  118 (282)
                      ..+++.. .....+       ..|+++.+.
T Consensus       107 ~~~~~~~-~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         107 ALLDDAE-LAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             SCCCHHH-HHHHHH-------TSSEEEECC
T ss_pred             hhhhhcc-cccccc-------ccceeeecc
Confidence            5554322 222222       567777654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.42  E-value=0.037  Score=40.81  Aligned_cols=118  Identities=14%  Similarity=0.074  Sum_probs=63.3

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-------EEEEEEcCh--hhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-------~Vii~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ..+.|+||+|.+|.+++..|++.+.       .+++.+.+.  ..++....++..... .....+  ..++..  .+   
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~--~~---   75 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDV--IATDKE--EI---   75 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEE--EEESCH--HH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc-cccccc--ccCccc--cc---
Confidence            4799999999999999999987542       355555433  233333333333211 111111  121111  11   


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcC
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS  172 (282)
                          ...+.|++|.++|......+ +.+++   ++.|.    .+++...+.+.+..   +..+.++.+|.
T Consensus        76 ----~~~~~dvVVitag~~~~~g~-sr~dl---l~~N~----~i~k~~~~~i~k~a---~~~~~iivvsN  130 (154)
T d5mdha1          76 ----AFKDLDVAILVGSMPRRDGM-ERKDL---LKANV----KIFKCQGAALDKYA---KKSVKVIVVGN  130 (154)
T ss_dssp             ----HTTTCSEEEECCSCCCCTTC-CTTTT---HHHHH----HHHHHHHHHHHHHS---CTTCEEEECSS
T ss_pred             ----ccCCceEEEEecccCCCCCC-chhHH---HHHhH----HHHHHHHHHHHhhC---CCceEEEEecC
Confidence                12378999999997655332 23322   33333    45666666666542   12345566664

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.38  E-value=0.0043  Score=48.08  Aligned_cols=65  Identities=14%  Similarity=0.129  Sum_probs=47.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH---------HHHHHHHhCCCCceeEEEccCCCH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD---------VKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~---------~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ...++||++.|.|. |.||+.+|+.|...|++|+..++.......         ..+++.+   ..++..+.+.+++.
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~---~sD~i~~~~plt~~  117 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF---HSDCVTLHCGLNEH  117 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH---HCSEEEECCCCCTT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccc---cCCEEEEeeccccc
Confidence            46689999999987 999999999999999999999876443211         1233322   23577777777654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.37  E-value=0.0049  Score=47.47  Aligned_cols=68  Identities=24%  Similarity=0.143  Sum_probs=47.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHH-------HHHHhCCCCceeEEEccCCCH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE-------TIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~-------~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ..+++++++.|.|. |.||+++++.|...|.+|+..++..........       .+.+.....++..+.+.+++.
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc
Confidence            46789999999997 899999999999999999999976432211111       112222234677777777653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.023  Score=42.43  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=38.0

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      ..+..+.||+++|.|- |-||+.+|+.|...|++|++++.++-.
T Consensus        17 ~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          17 ATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             HHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             HhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3456789999999997 689999999999999999999998754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.30  E-value=0.023  Score=42.52  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ..+..+++|.|+ |-.|+.-++-+...|++|.++|.+.+.+++......     ..+.+.   .++.+.+++.+.     
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~~~---~~~~~~l~~~~~-----   94 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVA-----   94 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHH-----
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----ccceee---hhhhhhHHHhhc-----
Confidence            345689999998 889999999999999999999999888766554432     233332   455566655544     


Q ss_pred             CCCccEEEEcCCCCC
Q 023438          108 HHQLNILINNAGIMG  122 (282)
Q Consensus       108 ~g~id~vi~~ag~~~  122 (282)
                        +.|+||.++-+.+
T Consensus        95 --~aDivI~aalipG  107 (168)
T d1pjca1          95 --EADLLIGAVLVPG  107 (168)
T ss_dssp             --TCSEEEECCCCTT
T ss_pred             --cCcEEEEeeecCC
Confidence              5699999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.28  E-value=0.0056  Score=46.98  Aligned_cols=65  Identities=22%  Similarity=0.194  Sum_probs=46.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHH--------HHHHHHhCCCCceeEEEccCCCH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--------KETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~--------~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ...+.|+++.|.|. |.||+++++.+...|++|+..++........        .+++.+   ..++..+.+.+++.
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~---~sDiv~~~~Plt~~  111 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLA---RADFISVHLPKTPE  111 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHH---HCSEEEECCCCSTT
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHh---hCCEEEEcCCCCch
Confidence            35678999999996 9999999999999999999998765432211        122222   23566666766653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.27  E-value=0.0041  Score=48.39  Aligned_cols=39  Identities=15%  Similarity=0.026  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ..++|+++.|.|- |.||+.+|+.|...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4688999999998 89999999999999999999987644

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.25  E-value=0.011  Score=44.48  Aligned_cols=79  Identities=14%  Similarity=0.167  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHH-HHHHHHHHHhc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~-i~~~~~~i~~~  107 (282)
                      .|.+++|.|+ ||+|...+..+...|. +|+.+++++++++... ++     +.. .++  |.++.++ .++..+...  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~-----GAd-~~i--n~~~~~~~~~~~~~~~~--   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-DFV--NPNDHSEPISQVLSKMT--   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-EEE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc-----CCc-EEE--cCCCcchhHHHHHHhhc--
Confidence            5789999986 7788888888888887 6888888887754433 22     322 222  4333222 333333332  


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|+++-++|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2378999999983

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.023  Score=39.65  Aligned_cols=74  Identities=14%  Similarity=0.132  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +...+.++.|.|| |=+|+-++.+..+.|+++++.+.+......          ...-.++.+|..|.+.+.++....  
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~--   73 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE--   73 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh--
Confidence            3445578999996 899999999999999999999987553111          011356778999999988887764  


Q ss_pred             cCCCccEEEE
Q 023438          107 QHHQLNILIN  116 (282)
Q Consensus       107 ~~g~id~vi~  116 (282)
                         .+|++..
T Consensus        74 ---~~DviT~   80 (111)
T d1kjqa2          74 ---KPHYIVP   80 (111)
T ss_dssp             ---CCSEEEE
T ss_pred             ---CCceEEE
Confidence               6777754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.23  E-value=0.0021  Score=47.61  Aligned_cols=39  Identities=13%  Similarity=0.123  Sum_probs=34.8

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      .-++++||++||+|| |.+|..-++.|++.|++|.+++..
T Consensus         7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             hheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            347799999999999 679999999999999999999754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0024  Score=55.73  Aligned_cols=64  Identities=22%  Similarity=0.269  Sum_probs=49.3

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChh-------------------hHHHHHHHHHHhCCCCceeEEE
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA-------------------AGKDVKETIVKEIPSAKVDAME   88 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~-------------------~~~~~~~~l~~~~~~~~v~~~~   88 (282)
                      +++.+|||.|+ ||+|..+++.|+..|. ++.++|.+.=                   +.+.+.+.+++.+|..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            56788999999 8899999999999998 7999875421                   3455666777777777777777


Q ss_pred             ccCCC
Q 023438           89 LDLSS   93 (282)
Q Consensus        89 ~Dvs~   93 (282)
                      .++.+
T Consensus       114 ~~i~~  118 (426)
T d1yovb1         114 NKIQD  118 (426)
T ss_dssp             SCGGG
T ss_pred             ccccc
Confidence            66654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.95  E-value=0.042  Score=42.40  Aligned_cols=76  Identities=22%  Similarity=0.170  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEecCCCh-hHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGSGLTAIVTGATSG-IGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~~~~~lItG~s~g-IG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      -+++|+++|=.|++.| +|.    ++++.|+ +|+.++.+...++...+.+...  +.+..++.+|+.+.          
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC----------
T ss_pred             CCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh----------
Confidence            4578999998886655 443    3456786 8999999998888777766543  45678888887442          


Q ss_pred             HhcCCCccEEEEcCCCC
Q 023438          105 NIQHHQLNILINNAGIM  121 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~~  121 (282)
                         .+++|+||.|..+.
T Consensus       107 ---~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---CCCCSEEEECCCCS
T ss_pred             ---CCcCcEEEEcCccc
Confidence               35799999998653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.95  E-value=0.0076  Score=46.53  Aligned_cols=40  Identities=18%  Similarity=-0.002  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ...++|+++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            35688999999998 89999999999999999999987644

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.89  E-value=0.036  Score=41.08  Aligned_cols=84  Identities=18%  Similarity=0.137  Sum_probs=51.4

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-----CCceeEEEccCCCHHHHHHHHH---HHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFAS---EYN  105 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-----~~~v~~~~~Dvs~~~~i~~~~~---~i~  105 (282)
                      +-|.|- |-+|.++|+.|++.|++|++.+|+.+..++..+.-.....     ..+...+..-+.+.+.++.++.   .+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            556655 9999999999999999999999998887665432100000     0123344455667777777652   233


Q ss_pred             hcCCCccEEEEcC
Q 023438          106 IQHHQLNILINNA  118 (282)
Q Consensus       106 ~~~g~id~vi~~a  118 (282)
                      ....+=+++|.+.
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            2222334555554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.82  E-value=0.0017  Score=49.88  Aligned_cols=38  Identities=29%  Similarity=0.231  Sum_probs=34.4

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .++|+++.|.|. |.||+.+++.+...|++|+..+|+..
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            478999999998 66999999999999999999998754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.75  E-value=0.017  Score=41.36  Aligned_cols=73  Identities=15%  Similarity=0.255  Sum_probs=54.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEE-EcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~-~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++.|.|++|-.|+++++.+.+.|++++.. +++...          .....+   +..|+|.++...+.++.+.+.  +.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            58999999999999999999999986643 443221          111222   356999999999999988766  55


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      -+|+-..|+
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            688888885

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.61  E-value=0.028  Score=44.52  Aligned_cols=77  Identities=8%  Similarity=-0.063  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ...+++++|=.|++.|.   ++..|+++|++|+.++.++..++...+.....  +.++.++.+|+.+.+           
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------
Confidence            45677899999988875   77888999999999999988877776666554  457888988886532           


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ..+++|+|++..+
T Consensus        98 ~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 INRKFDLITCCLD  110 (246)
T ss_dssp             CSCCEEEEEECTT
T ss_pred             ccccccccceeee
Confidence            1247999887654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.015  Score=43.59  Aligned_cols=41  Identities=32%  Similarity=0.388  Sum_probs=36.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+...
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            46789999999999999999999999999999988865543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.47  E-value=0.077  Score=39.31  Aligned_cols=87  Identities=13%  Similarity=0.129  Sum_probs=53.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcChhhHHHHHHHHH-Hh-CC------CCceeEEEccCCCHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIV-KE-IP------SAKVDAMELDLSSLASVRNFA  101 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~~~~~~~~~~l~-~~-~~------~~~v~~~~~Dvs~~~~i~~~~  101 (282)
                      |+++|+|. |-+|.++|+.|.+.|+  +|+..+++++..+...+.-. .. ..      ......+..- .-++.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence            46888975 9999999999999996  78888999877665543310 00 00      0011111111 2346677778


Q ss_pred             HHHHhcCCCccEEEEcCCC
Q 023438          102 SEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       102 ~~i~~~~g~id~vi~~ag~  120 (282)
                      +++......=.+++..++.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8877665444566655553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.37  E-value=0.018  Score=44.56  Aligned_cols=64  Identities=17%  Similarity=0.091  Sum_probs=46.1

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH------HHHHHHHHhCCCCceeEEEccCCCH
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------DVKETIVKEIPSAKVDAMELDLSSL   94 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~------~~~~~l~~~~~~~~v~~~~~Dvs~~   94 (282)
                      ..+.||++.|.|. |.||+.+|+.|...|++|+..++......      ...+++.+.   .++..+.+.+++.
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~---~D~v~~~~plt~~  110 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQ---SDVIDLHVPGIEQ  110 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHH---CSEEEECCCCCGG
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHHh---cccceeeeccccc
Confidence            5678999999998 89999999999999999999987644211      112333332   3566776766653

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.0094  Score=44.25  Aligned_cols=34  Identities=21%  Similarity=0.149  Sum_probs=31.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      ++.|.|+ |.+|..++..|++.|++|.+++|+...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5888988 999999999999999999999998754

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.31  E-value=0.056  Score=41.59  Aligned_cols=71  Identities=25%  Similarity=0.200  Sum_probs=51.6

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++|++||=.|+++|+   ++..++..|+ +|+.++.+...++...+.      ..++.++.+|+.+.            
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc------------
Confidence            5789999999988773   3345677886 699999987765544332      23578888998542            


Q ss_pred             cCCCccEEEEcCCC
Q 023438          107 QHHQLNILINNAGI  120 (282)
Q Consensus       107 ~~g~id~vi~~ag~  120 (282)
                       .+++|+||.|..+
T Consensus       105 -~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -SGKYDTWIMNPPF  117 (197)
T ss_dssp             -CCCEEEEEECCCC
T ss_pred             -CCcceEEEeCccc
Confidence             2589999999764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.30  E-value=0.051  Score=37.81  Aligned_cols=35  Identities=23%  Similarity=0.153  Sum_probs=31.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .++++|.|| |.+|..+|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            489999998 99999999999999999999987654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.26  E-value=0.013  Score=41.94  Aligned_cols=71  Identities=18%  Similarity=0.183  Sum_probs=49.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |.++|.|. |.+|..++++|.  |.+|++++.+++..+..    ..    ..+.++.+|.++++.++++      ...+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~----~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LR----SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HH----TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hh----cCccccccccCCHHHHHHh------hhhcC
Confidence            45778876 889999999994  66788888887765443    22    2478889999998766653      22356


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      +.+|.+..
T Consensus        64 ~~vi~~~~   71 (129)
T d2fy8a1          64 RAVIVNLE   71 (129)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEecc
Confidence            77776543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.26  E-value=0.03  Score=42.13  Aligned_cols=39  Identities=26%  Similarity=0.188  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ..+++||.++|.|-|.=+|+-+|..|+++|+.|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            458999999999999999999999999999999887654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.1  Score=42.89  Aligned_cols=76  Identities=11%  Similarity=0.109  Sum_probs=53.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.++.. ....+...+.....++.++..|+.+..          ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~----------~~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVH----------LP   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhc----------Cc
Confidence            579999999998876   5667778897 79999988653 444444444433567899999987643          12


Q ss_pred             CCCccEEEEcC
Q 023438          108 HHQLNILINNA  118 (282)
Q Consensus       108 ~g~id~vi~~a  118 (282)
                      ..++|+|+...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            24789998754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.20  E-value=0.11  Score=38.70  Aligned_cols=40  Identities=18%  Similarity=0.187  Sum_probs=33.7

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~   74 (282)
                      +-|+ |.|-+|.++|+.|++.|++|.+.+|++++.+.+.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            3444 559999999999999999999999999887776654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.016  Score=43.73  Aligned_cols=42  Identities=21%  Similarity=0.274  Sum_probs=37.3

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      ..+++||.++|.|-|.-+|+-++..|+++|+.|.++......
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            467899999999999999999999999999999988765443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.16  E-value=0.053  Score=40.15  Aligned_cols=85  Identities=11%  Similarity=-0.013  Sum_probs=52.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH-------HHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-------VKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l-------~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      ++|-|.| .|-+|.++|+.|++.|++|.+.+|+.+..+...+.-       .+..  .....+..-+.+.+.++.++...
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~--~~~diii~~v~~~~~~~~v~~~~   78 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV--QGADVVISMLPASQHVEGLYLDD   78 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH--TSCSEEEECCSCHHHHHHHHHST
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhc--cccCeeeecccchhhHHHHHhcc
Confidence            3466665 499999999999999999999999988766543221       1111  12344555566667777665532


Q ss_pred             ---HhcCCCccEEEEcCC
Q 023438          105 ---NIQHHQLNILINNAG  119 (282)
Q Consensus       105 ---~~~~g~id~vi~~ag  119 (282)
                         .....+=+++|.+..
T Consensus        79 ~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          79 DGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             TCHHHHSCTTCEEEECSC
T ss_pred             ccccccCCCCCEEEECCC
Confidence               222222245555543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.018  Score=41.00  Aligned_cols=34  Identities=24%  Similarity=0.287  Sum_probs=31.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .|+++|.|| |.||..+|..|++.|.+|.++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378999998 7899999999999999999999874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.08  E-value=0.021  Score=40.45  Aligned_cols=36  Identities=25%  Similarity=0.137  Sum_probs=31.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .++|+++|.|| |.+|..+|..|++.|.+|.++.+..
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            35688999977 8999999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.07  E-value=0.036  Score=39.14  Aligned_cols=34  Identities=21%  Similarity=0.135  Sum_probs=30.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .|+++|.|| |.||..+|..|++.|.+|.++.+..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            379999998 8999999999999999999998764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.069  Score=42.02  Aligned_cols=74  Identities=14%  Similarity=0.059  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +++++|=.|++.|   .++..|++.|++|+.++.++.-++...+...+.  +.++.++.+|+.+.+           -.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------ccc
Confidence            4578999998876   446678899999999999988777777666554  447889999986643           124


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+|++.-+
T Consensus       105 ~fD~I~~~~~  114 (251)
T d1wzna1         105 EFDAVTMFFS  114 (251)
T ss_dssp             CEEEEEECSS
T ss_pred             ccchHhhhhh
Confidence            7898887644

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.98  E-value=0.02  Score=40.52  Aligned_cols=36  Identities=25%  Similarity=0.272  Sum_probs=32.1

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++++++|.|| |.+|.++|..|++.|.+|.++.+...
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4688999988 99999999999999999999988754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.94  E-value=0.021  Score=40.31  Aligned_cols=35  Identities=37%  Similarity=0.322  Sum_probs=31.1

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++.++|.|| |.+|..+|..|++.|.+|.++.|...
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            478889888 99999999999999999999987643

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.88  E-value=0.032  Score=39.41  Aligned_cols=32  Identities=38%  Similarity=0.367  Sum_probs=29.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      +.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            68899988 999999999999999999999876

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.88  E-value=0.014  Score=44.90  Aligned_cols=40  Identities=25%  Similarity=0.200  Sum_probs=34.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      +++.|.|+ |..|.++|..|++.|++|.+.+|+++..+...
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            57889998 77999999999999999999999977655433

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.87  E-value=0.052  Score=37.95  Aligned_cols=34  Identities=18%  Similarity=0.153  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .++++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478999988 9999999999999999999998864

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.85  E-value=0.67  Score=37.94  Aligned_cols=83  Identities=14%  Similarity=0.066  Sum_probs=56.4

Q ss_pred             CCCCCEEEEec-CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           28 DGSGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        28 ~~~~~~~lItG-~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..+|++||=.+ ++|+++.++    +..|.+|+.++.+...++...+.+.... -.++.++.+|+.+.      .+....
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHH
T ss_pred             HhCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHh
Confidence            35789999666 456665543    3456789999999999888887776542 23678888887432      223333


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                      ...++|+||.+...+
T Consensus       212 ~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         212 EGERFDLVVLDPPAF  226 (318)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             hhcCCCEEEEcCCcc
Confidence            345899999998643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.75  E-value=0.17  Score=41.53  Aligned_cols=77  Identities=12%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.++. .....+......-..++.++..|+.+.+          ..
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence            478999999988875   4566778896 6999997753 4444444444333456899999987643          12


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                      ..++|+++....
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            347899887643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.61  E-value=0.023  Score=44.68  Aligned_cols=34  Identities=32%  Similarity=0.443  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      .|.|+|+|| |-.|.++|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999998 8999999999999999999999863

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.59  E-value=0.051  Score=38.07  Aligned_cols=36  Identities=28%  Similarity=0.066  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ..+.++|.|| |.||..+|..|++.|.+|.++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3488999998 99999999999999999999987643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.56  E-value=0.034  Score=40.77  Aligned_cols=41  Identities=12%  Similarity=0.232  Sum_probs=33.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC-CEEEEEEcChhhHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G-~~Vii~~r~~~~~~~~~~~   74 (282)
                      .+.++|+ |-+|.++++.|.+.| ++|++.+|+.++.+...++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3567776 999999999999888 7999999998776655443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.51  E-value=0.052  Score=42.84  Aligned_cols=48  Identities=19%  Similarity=0.186  Sum_probs=41.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHH
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~   74 (282)
                      ..+++|++++|-|- |.+|..+|+.|.+.|++|++++.+.........+
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            45689999999987 8999999999999999999999887776655443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.45  E-value=0.059  Score=38.17  Aligned_cols=35  Identities=17%  Similarity=0.067  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..+.++|.|| |-||..+|..|.+.|.+|.++.+..
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4589999998 9999999999999999999997764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.40  E-value=0.07  Score=40.00  Aligned_cols=63  Identities=17%  Similarity=0.087  Sum_probs=46.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-----------CCCceeEEEccCCCHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----------PSAKVDAMELDLSSLA   95 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-----------~~~~v~~~~~Dvs~~~   95 (282)
                      .|.+||..|++.|   ..+..|+++|++|+.++.++..++...+...+..           .+..+.++.+|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            5789999999877   3677899999999999999888777666553211           0234567777887644

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.36  E-value=0.29  Score=33.85  Aligned_cols=82  Identities=10%  Similarity=0.114  Sum_probs=54.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ||++||.--...+-..+...|.+.|++|+..+.+...   ..+.+.+..  ..+..+-.++-+.+. -++++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~--~dliilD~~mp~~~G-~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELK--PDIVTMDITMPEMNG-IDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHC--CSEEEEECSCGGGCH-HHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhcc--CCEEEEecCCCCCCH-HHHHHHHHHhCCC
Confidence            7899999999999999999999999998866666443   344444442  245444444434333 3455666666666


Q ss_pred             ccEEEEcC
Q 023438          111 LNILINNA  118 (282)
Q Consensus       111 id~vi~~a  118 (282)
                      +-+++.++
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77776654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.36  E-value=0.25  Score=35.90  Aligned_cols=79  Identities=10%  Similarity=0.148  Sum_probs=54.1

Q ss_pred             CCCCCEEEEecC-CChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAIVTGA-TSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~lItG~-s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +++|+++|=.|+ ||.+|.    +++++|+ +|+.++.+.+..+...+.+....-..++..+..|+.+      .+   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            478999996664 455655    4567887 7999999988887777776554333568888888532      12   2


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                      ...+++|+++....
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            23457999988753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.30  E-value=0.14  Score=39.27  Aligned_cols=75  Identities=13%  Similarity=0.037  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+...++...+...+.  +..+..+..|..+..          ...+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCc
Confidence            34678999988876   56678889999999999988877777766655  346777888887632          1224


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|+|++...
T Consensus       102 ~fD~I~~~~~  111 (226)
T d1ve3a1         102 TFDYVIFIDS  111 (226)
T ss_dssp             CEEEEEEESC
T ss_pred             CceEEEEecc
Confidence            7899887754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.26  E-value=0.023  Score=43.49  Aligned_cols=63  Identities=13%  Similarity=0.099  Sum_probs=44.7

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHH------HHHHHHHHhCCCCceeEEEccCCC
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------DVKETIVKEIPSAKVDAMELDLSS   93 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~------~~~~~l~~~~~~~~v~~~~~Dvs~   93 (282)
                      ..++++++.|.|- |.||+.+|+.+...|++|+..++......      +..+++.+.   .++..+.+.+++
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~---sDii~i~~plt~  108 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNM---SDVVSLHVPENP  108 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHH---CSEEEECCCSST
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhh---ccceeecccCCc
Confidence            4688999999966 99999999999999999999987644211      112233332   356666666664

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.23  E-value=0.077  Score=39.64  Aligned_cols=121  Identities=10%  Similarity=0.075  Sum_probs=61.9

Q ss_pred             CCEEEEecCCChhHHHHHHHHHH-c----CCEEEEEEcChhhHHHHHHHHHH---hCCCCceeEEEccCCCHHHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLAL-R----GVHVVMGVRDIAAGKDVKETIVK---EIPSAKVDAMELDLSSLASVRNFAS  102 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~-~----G~~Vii~~r~~~~~~~~~~~l~~---~~~~~~v~~~~~Dvs~~~~i~~~~~  102 (282)
                      ...+.|.||++.....++..++. .    +.+++++|.++++++...+.+..   .. +........  +|   ..+.+ 
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d---~~eal-   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-APDIEFAAT--TD---PEEAF-   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-CTTSEEEEE--SC---HHHHH-
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-CCCcceEec--CC---hhhcc-
Confidence            44677778765433333334433 2    24899999999887644443332   21 112222111  12   12222 


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCCcCChhhHHHHHHHH----------------HHHHHHHHHHHHHHHHhhhccCCCCCe
Q 023438          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN----------------HLGHFLLTNLLLDTMKKTARKSGGEGR  166 (282)
Q Consensus       103 ~i~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n----------------~~~~~~~~~~~~~~l~~~~~~~~~~g~  166 (282)
                            .+-|+||.++|..+..    -..-++.+..|                ..-+.-+++.+.+.+.+.    ++.+-
T Consensus        76 ------~~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~----~P~A~  141 (167)
T d1u8xx1          76 ------TDVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----SPDAW  141 (167)
T ss_dssp             ------SSCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCE
T ss_pred             ------CCCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh----CCCeE
Confidence                  2679999999974321    11111222222                122344556666666665    34667


Q ss_pred             EEEEcC
Q 023438          167 IINVSS  172 (282)
Q Consensus       167 iv~vsS  172 (282)
                      ++++|.
T Consensus       142 li~~TN  147 (167)
T d1u8xx1         142 MLNYSN  147 (167)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            777776

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.20  E-value=0.39  Score=39.32  Aligned_cols=82  Identities=17%  Similarity=0.068  Sum_probs=55.8

Q ss_pred             CCCEEE-EecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhC-CCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~l-ItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      ++++|| +..++|+++.++    ++.|++|+.++.+...++...+.+.... ...++.++..|+.      +.+++...+
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            577888 445566665554    4579999999999998888887765442 2345788887773      223333344


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                      ..++|+||...-.+
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            45899999987643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.13  E-value=0.039  Score=41.76  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~   77 (282)
                      .+.|.|+ |..|.++|..|++.|++|.+.+|..+  ++..+.+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhh
Confidence            5678887 89999999999999999999998643  233445543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.10  E-value=0.19  Score=37.84  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=57.6

Q ss_pred             CCCCCEEE-EecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH
Q 023438           28 DGSGLTAI-VTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        28 ~~~~~~~l-ItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      ..+|+++| +..|||.+|.+    ++++|+ +|+.++.+....+...+.+.......++.++..|+.      +.++...
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            46788888 55567778875    556888 699999999888887777765433446888888873      2333433


Q ss_pred             hcCCCccEEEEcCC
Q 023438          106 IQHHQLNILINNAG  119 (282)
Q Consensus       106 ~~~g~id~vi~~ag  119 (282)
                      ....++|+|+....
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            34457999987764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.02  E-value=0.026  Score=42.72  Aligned_cols=36  Identities=17%  Similarity=0.115  Sum_probs=31.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAA   67 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~   67 (282)
                      +|+|+|+|| |-.|..+|..|+++|+ +|.++.|+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            589999998 8999999999999999 59898887543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.98  E-value=0.17  Score=39.31  Aligned_cols=79  Identities=16%  Similarity=0.092  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++|.+|+++|.-.++.-++.  |.+|+.+.++++..+...+.+.+. .-.++.++.+|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccC----------CcccC
Confidence            57899999999999999888876  567999999987777766666553 246799999998641          12235


Q ss_pred             CccEEEEcCCCC
Q 023438          110 QLNILINNAGIM  121 (282)
Q Consensus       110 ~id~vi~~ag~~  121 (282)
                      ++|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999888864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.93  E-value=0.028  Score=44.90  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=30.2

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      +|+|+|+|| |-=|.+.|.+|++.|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            589999988 7889999999999999999997653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.87  E-value=0.11  Score=39.32  Aligned_cols=42  Identities=17%  Similarity=0.123  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~   72 (282)
                      ..-.++|.|| |-.|..-++-....|++|.++|.+...+++..
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            3468999998 89999999999999999999999988755543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.83  E-value=0.057  Score=39.59  Aligned_cols=41  Identities=10%  Similarity=0.218  Sum_probs=33.2

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l   75 (282)
                      +.|.| .|-+|.++++.|.+.|+++++.+|+.++.++..+++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            45554 599999999999999999999999987766555443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.80  E-value=0.057  Score=40.90  Aligned_cols=39  Identities=23%  Similarity=0.064  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ...+.|+++|+|| |.-|.+.|..|+++|++|.++.++..
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3356799999998 89999999999999999999998754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.80  E-value=0.3  Score=40.27  Aligned_cols=82  Identities=12%  Similarity=0.075  Sum_probs=56.2

Q ss_pred             CCCEEEEecC-CChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           30 SGLTAIVTGA-TSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        30 ~~~~~lItG~-s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      +|+++|=.++ +|+++.+++    +.|+ +|+.++.++..++...+.+....-..++.++..|+.+      ..+.....
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            4788986664 466665544    5676 7999999999988888877655323467788777642      22333334


Q ss_pred             CCCccEEEEcCCCC
Q 023438          108 HHQLNILINNAGIM  121 (282)
Q Consensus       108 ~g~id~vi~~ag~~  121 (282)
                      ..++|+||.+....
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            46899999987643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.80  E-value=0.23  Score=35.55  Aligned_cols=76  Identities=12%  Similarity=0.101  Sum_probs=52.1

Q ss_pred             EEEEecCCChhHHHHHHHHHH-cCCEEEE-EEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           33 TAIVTGATSGIGTETARVLAL-RGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~-~G~~Vii-~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++.|.|++|-.|+++++.+.+ .+++++. +++.. ....    +...  +  .. +..|+|.++.....++.+.+.  .
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~~--~--~D-vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTDG--N--TE-VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHTT--T--CS-EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hccc--c--CC-EEEEcccHHHHHHHHHHHHhc--C
Confidence            578999999999999998776 4567553 34432 2111    1111  2  22 447999999999998887655  5


Q ss_pred             ccEEEEcCCC
Q 023438          111 LNILINNAGI  120 (282)
Q Consensus       111 id~vi~~ag~  120 (282)
                      .-+|+-..|+
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            6678877775

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.77  E-value=0.042  Score=38.32  Aligned_cols=34  Identities=26%  Similarity=0.102  Sum_probs=30.6

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++++|.|| |.+|..+|..|++.|.+|.++.|...
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            78889888 99999999999999999999988643

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.77  E-value=0.24  Score=36.31  Aligned_cols=82  Identities=17%  Similarity=0.163  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC---CHHHHHHHHHHHHh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS---SLASVRNFASEYNI  106 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs---~~~~i~~~~~~i~~  106 (282)
                      +|+++.|.+.|||.|.-++..+.+.|.++--.  +    +++.+++.+..|.....--++|++   +.+...+.++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~----~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E----EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C----HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C----HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            68999999999999999999999999776432  2    344555555555322222234553   45666666665543


Q ss_pred             cCCCccEEEEcC
Q 023438          107 QHHQLNILINNA  118 (282)
Q Consensus       107 ~~g~id~vi~~a  118 (282)
                       .+.+|.++...
T Consensus        76 -d~~vd~v~v~~   86 (163)
T d2csua3          76 -DPNVDMLIAIC   86 (163)
T ss_dssp             -STTCSEEEEEE
T ss_pred             -CCCcCEEEEee
Confidence             45778665433

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.09  Score=42.96  Aligned_cols=26  Identities=19%  Similarity=0.257  Sum_probs=22.6

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           39 ATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        39 ~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      .||..|.++|++|..+|++|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            35778999999999999999998654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.59  E-value=0.19  Score=38.85  Aligned_cols=81  Identities=11%  Similarity=0.014  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.+||-+|+++|.-.++.-++...+..|+.++.+++..+...+.+... .-.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-cccccccccCchHHcc----------cccc
Confidence            4779999998887776666555555669999999998888887777553 2346777777765311          1224


Q ss_pred             CccEEEEcCCCC
Q 023438          110 QLNILINNAGIM  121 (282)
Q Consensus       110 ~id~vi~~ag~~  121 (282)
                      .+|.|+.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999888753

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.54  E-value=0.24  Score=39.46  Aligned_cols=74  Identities=15%  Similarity=0.137  Sum_probs=54.0

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ..|+++|=.|+++|+   ++..+++.|++|+.++.++...+...+.....  +.++.++..|+.+         .  ...
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~---------~--~~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA---------A--LPF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH---------H--GGG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc---------c--ccc
Confidence            478999999998886   23456778999999999999988887776654  4456677766421         1  123


Q ss_pred             CCccEEEEcC
Q 023438          109 HQLNILINNA  118 (282)
Q Consensus       109 g~id~vi~~a  118 (282)
                      +++|+|+.|.
T Consensus       183 ~~fD~V~ani  192 (254)
T d2nxca1         183 GPFDLLVANL  192 (254)
T ss_dssp             CCEEEEEEEC
T ss_pred             cccchhhhcc
Confidence            5899998873

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.49  E-value=0.056  Score=38.70  Aligned_cols=36  Identities=22%  Similarity=0.198  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++++++|.|| |.+|.++|..|++.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4689999987 99999999999999999999987643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.42  E-value=0.16  Score=41.30  Aligned_cols=36  Identities=22%  Similarity=0.112  Sum_probs=32.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~   62 (282)
                      ..+++|++++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            45789999999987 8999999999999999988775

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.40  E-value=0.067  Score=37.09  Aligned_cols=35  Identities=20%  Similarity=0.123  Sum_probs=30.7

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .++++|.|| |.+|..+|..|++.|.+|.++.+...
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            478888887 99999999999999999999987643

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.37  E-value=0.53  Score=38.62  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=52.8

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.+. .+....+...+.....++.++..|+.+.+          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            478999999988774   4556778897 688888774 34444444444433567899999987642          11


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                      ..++|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            247899887654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.32  E-value=1.2  Score=36.36  Aligned_cols=83  Identities=12%  Similarity=0.063  Sum_probs=56.5

Q ss_pred             CCCCEEEEe-cCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCC-CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           29 GSGLTAIVT-GATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        29 ~~~~~~lIt-G~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      -+|+++|=. .++|+++.+    +++.|+ +|+.++.+...++...+.+....- ..++.++..|+-      ..++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            368888844 456766654    345787 699999999988888887764422 246888888873      2233333


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                      .+..++|+||.....+
T Consensus       213 ~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             HTTCCEEEEEECCCCC
T ss_pred             hhcCCCCEEEEcChhh
Confidence            4456899999997643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.32  E-value=0.035  Score=44.36  Aligned_cols=32  Identities=25%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      -|+|+|| |-.|.++|.+|+++|++|++++++.
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4888887 9999999999999999999998864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.26  E-value=0.41  Score=35.80  Aligned_cols=77  Identities=18%  Similarity=0.081  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +|.++|=.|++.|   .++.+|++.+.+|+.++.++..++...+.+.+..-..++.++.+|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5789998887665   333445666779999999999988888887765323578888887521          112345


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999987653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.26  E-value=0.051  Score=48.39  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=29.9

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD   64 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~   64 (282)
                      |++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            45678999997 8999999999999997 78888653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.21  E-value=0.069  Score=37.23  Aligned_cols=36  Identities=31%  Similarity=0.341  Sum_probs=31.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .++.++|.|| |-||..+|..|++.|.+|.++.|...
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3689998888 99999999999999999999987644

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.20  E-value=0.12  Score=39.41  Aligned_cols=82  Identities=10%  Similarity=0.091  Sum_probs=59.9

Q ss_pred             CCEEE-EecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           31 GLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        31 ~~~~l-ItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      |.+++ +|-|+||...++.+.+ . +.+|+.+|++++.++...+.+.. + +.++.++..+.++..   .+++..  ..+
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~-~~r~~~~~~~f~~~~---~~~~~~--~~~   94 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-F-SDRVSLFKVSYREAD---FLLKTL--GIE   94 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-G-TTTEEEEECCGGGHH---HHHHHT--TCS
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-c-cccccchhHHHhhHH---HHHHHc--CCC
Confidence            34444 7888899999999876 3 46899999999988877766644 3 457999998887643   333332  235


Q ss_pred             CccEEEEcCCCC
Q 023438          110 QLNILINNAGIM  121 (282)
Q Consensus       110 ~id~vi~~ag~~  121 (282)
                      .+|.++...|+.
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            899999999974

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.14  E-value=0.14  Score=34.41  Aligned_cols=71  Identities=10%  Similarity=0.076  Sum_probs=45.3

Q ss_pred             CCCEEEEecCCChhH-HHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIG-TETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG-~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +.+++.+.|- +|+| .++|+.|.++|++|...|+......   +.+.+.  +  +.+...+-.  +.           .
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~--G--i~v~~g~~~--~~-----------i   65 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQA--G--AKIYIGHAE--EH-----------I   65 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHT--T--CEEEESCCG--GG-----------G
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHC--C--CeEEECCcc--cc-----------C
Confidence            4577888886 4555 6789999999999999998754333   334333  3  333333222  11           1


Q ss_pred             CCccEEEEcCCCC
Q 023438          109 HQLNILINNAGIM  121 (282)
Q Consensus       109 g~id~vi~~ag~~  121 (282)
                      .+.|.+|.+.++.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            2578999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.86  E-value=0.056  Score=38.11  Aligned_cols=35  Identities=26%  Similarity=0.175  Sum_probs=31.6

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .+.++|.|| |-||..+|..|.+.|.+|.++.|+..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            479999998 99999999999999999999988653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.81  E-value=0.12  Score=37.64  Aligned_cols=36  Identities=19%  Similarity=0.111  Sum_probs=29.6

Q ss_pred             CCEEEEe-cCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVT-GATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lIt-G~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ++.++|. .+++.||.++|..|++.|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4455554 46799999999999999999999998754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.18  Score=39.26  Aligned_cols=79  Identities=13%  Similarity=0.074  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHh----------------CCCCceeEEEccCCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----------------IPSAKVDAMELDLSS   93 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~----------------~~~~~v~~~~~Dvs~   93 (282)
                      .+.+||..|++.|   ..+..|++.|++|+.++-++...+...++....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            6789999999877   458888999999999999988766655543211                012457778888754


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           94 LASVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        94 ~~~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      ..         ....+.+|+|+....+
T Consensus       122 l~---------~~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LP---------RTNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GG---------GSCCCCEEEEEESSST
T ss_pred             cc---------ccccCceeEEEEEEEE
Confidence            32         1223467877665543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.74  E-value=0.066  Score=44.16  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      +.|.++|+|| |--|..+|.+|++.|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            5689999998 78899999999999999999986643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.73  E-value=0.083  Score=40.56  Aligned_cols=36  Identities=17%  Similarity=0.026  Sum_probs=30.2

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      +.|. |.|.+|..+|..|++.|++|+.+|.+++..+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            5666 55999999999999999999999998765433

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.60  E-value=0.16  Score=37.58  Aligned_cols=42  Identities=19%  Similarity=0.188  Sum_probs=37.7

Q ss_pred             CCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        25 ~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      .+.-+.||+++|.|- |-+|+.+|++|...|++|+++..++-.
T Consensus        17 t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          17 TDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             HCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             hCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            356789999999998 889999999999999999999988744

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.50  E-value=0.084  Score=41.53  Aligned_cols=35  Identities=29%  Similarity=0.160  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ..++|+|+|| |--|..+|..|++.|++|+++.|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 8889999999999999999998764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.49  E-value=0.59  Score=37.44  Aligned_cols=78  Identities=14%  Similarity=0.143  Sum_probs=53.6

Q ss_pred             CEEEEecCCCh-hHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           32 LTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        32 ~~~lItG~s~g-IG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      ++++-.|+++| |+.++++   ...++|+.++.+...++-+.+......-...+.+...|+.+.         ....+++
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45664555544 5555543   356799999999999888888776543234566777888643         2344578


Q ss_pred             ccEEEEcCCCC
Q 023438          111 LNILINNAGIM  121 (282)
Q Consensus       111 id~vi~~ag~~  121 (282)
                      +|+||.|..+.
T Consensus       180 fDlIVsNPPYI  190 (271)
T d1nv8a_         180 IEMILSNPPYV  190 (271)
T ss_dssp             CCEEEECCCCB
T ss_pred             ccEEEEccccc
Confidence            99999999865

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.47  E-value=0.078  Score=39.00  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC--EEEEEEcCh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDI   65 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~--~Vii~~r~~   65 (282)
                      .||+++|.|| |..|..+|.+|.+.|.  +|.++.++.
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999999 8899999999999885  788887664

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.42  E-value=0.23  Score=39.59  Aligned_cols=36  Identities=22%  Similarity=0.137  Sum_probs=32.1

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~   62 (282)
                      ..+++|++++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            4578999999999 59999999999999999988664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.41  E-value=0.066  Score=43.35  Aligned_cols=35  Identities=26%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      +.|+|+|+|| |--|.+.|.+|+++|++|.++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4579999998 7889999999999999999998764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.21  E-value=0.78  Score=32.69  Aligned_cols=86  Identities=10%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             CCCEEEEecCC---ChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           30 SGLTAIVTGAT---SGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        30 ~~~~~lItG~s---~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+.........  ....+.+ .+ ..+..+.. +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-lp-~~iD~v~i-~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-IP-DKIEVVDL-FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-CS-SCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-cC-ccceEEEE-EeCHHHHHHHHHHH
Confidence            46899999999   689999999999999999998655332110  0111111 11 11222111 13466777777777


Q ss_pred             HhcCCCccEEEEcCCC
Q 023438          105 NIQHHQLNILINNAGI  120 (282)
Q Consensus       105 ~~~~g~id~vi~~ag~  120 (282)
                      .+.  .+..++...|.
T Consensus        95 ~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          95 IKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHH--TCSEEEECTTC
T ss_pred             HHh--CCCEEEEeccc
Confidence            665  35577777774

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.43  Score=37.02  Aligned_cols=82  Identities=18%  Similarity=0.040  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC----CCceeEEEccCCCHHHHHHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYN  105 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~----~~~v~~~~~Dvs~~~~i~~~~~~i~  105 (282)
                      +|.+||-+|+++|.-.++.-++.....+|+.++++++..+...+.+.+...    ..++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            478999999999999888888888788999999999888887777764321    235677777764311          


Q ss_pred             hcCCCccEEEEcCCCC
Q 023438          106 IQHHQLNILINNAGIM  121 (282)
Q Consensus       106 ~~~g~id~vi~~ag~~  121 (282)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1234799999988753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.12  E-value=0.33  Score=35.35  Aligned_cols=44  Identities=20%  Similarity=0.206  Sum_probs=32.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHc--CCEEEEEE--cChhhHHHHHHHH
Q 023438           32 LTAIVTGATSGIGTETARVLALR--GVHVVMGV--RDIAAGKDVKETI   75 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~--r~~~~~~~~~~~l   75 (282)
                      |++.|.|+||.||.....-+.+.  .++|+.++  ++.+.+.+...++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            68999999999999999988886  46766553  5555555555544

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.08  E-value=0.09  Score=41.10  Aligned_cols=37  Identities=27%  Similarity=0.300  Sum_probs=32.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      -.+|+++|+|| |.-|.+.|.+|++.|++|.++.++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            46799999998 78899999999999999999987654

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.65  E-value=0.42  Score=37.52  Aligned_cols=79  Identities=10%  Similarity=-0.037  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++++||=.|++.|   ..+..+++.|+ +|+.+|.++..++.+.+...+.....++.++.+|+....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            5789999998766   23456777776 7999999999888887776654434578899999854310         112


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|+|+++-++
T Consensus        92 ~~fD~V~~~~~l  103 (252)
T d1ri5a_          92 KEFDVISSQFSF  103 (252)
T ss_dssp             SCEEEEEEESCG
T ss_pred             ccceEEEEccee
Confidence            468998877654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.17  E-value=0.14  Score=37.28  Aligned_cols=36  Identities=22%  Similarity=0.210  Sum_probs=29.1

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      +-|.| .|-+|.++|+.|++.|++|+..+++......
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            45555 5999999999999999999988877665443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.14  E-value=0.094  Score=41.87  Aligned_cols=30  Identities=30%  Similarity=0.371  Sum_probs=27.4

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ++|+|| |-.|.++|.+|+++|++|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788887 899999999999999999999875

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.09  E-value=0.38  Score=35.65  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=48.6

Q ss_pred             CCCCEEEEec-CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG-~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+|.++|=.| |+|.+|    -+++++|++|+.++.+....+.+.+.+...  +........|.   +..   .......
T Consensus        40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~--~~~~~v~~~~~---d~~---~~~~~~~  107 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRT--GLGARVVALPV---EVF---LPEAKAQ  107 (171)
T ss_dssp             TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHH--TCCCEEECSCH---HHH---HHHHHHT
T ss_pred             cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhh--ccccceeeeeh---hcc---ccccccc
Confidence            3677888555 445555    356678999999999999888887777654  22222222222   221   2233334


Q ss_pred             CCCccEEEEcCC
Q 023438          108 HHQLNILINNAG  119 (282)
Q Consensus       108 ~g~id~vi~~ag  119 (282)
                      ..++|+|+.+..
T Consensus       108 ~~~fD~If~DPP  119 (171)
T d1ws6a1         108 GERFTVAFMAPP  119 (171)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCccceeEEccc
Confidence            457999998864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.05  E-value=0.72  Score=33.27  Aligned_cols=84  Identities=15%  Similarity=0.066  Sum_probs=53.7

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC----CCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~----~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +-++|- |-+|.++|++|++.|+.+ +..|+.++..+..++......    -.+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            556666 899999999999988765 577887776666554421110    01233344456667778877777766555


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5556555543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=90.95  E-value=0.41  Score=36.76  Aligned_cols=78  Identities=10%  Similarity=0.076  Sum_probs=55.0

Q ss_pred             CCCEEEEecCC-ChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s-~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      .+.++|=.|++ |.+...+++++...|++|+.++-++.-++...+.+.+......+.....|..+.+            +
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~------------~  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE------------I  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC------------C
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccc------------c
Confidence            46789999966 5556677777667899999999999888887777765544455666666765422            2


Q ss_pred             CCccEEEEcCC
Q 023438          109 HQLNILINNAG  119 (282)
Q Consensus       109 g~id~vi~~ag  119 (282)
                      .+.|+++.+..
T Consensus       107 ~~~d~i~~~~~  117 (225)
T d1im8a_         107 KNASMVILNFT  117 (225)
T ss_dssp             CSEEEEEEESC
T ss_pred             ccceeeEEeee
Confidence            35677666544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.78  E-value=0.16  Score=40.15  Aligned_cols=35  Identities=26%  Similarity=0.213  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEE
Q 023438           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (282)
Q Consensus        27 ~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~   62 (282)
                      .+++|++++|-| .|-+|.++|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            478999999997 59999999999999999988765

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=90.69  E-value=0.46  Score=36.94  Aligned_cols=75  Identities=12%  Similarity=-0.057  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      .|.++|-+|+++|.-.++   |++.+.+|+.+..+++..+...+.+ ..  ..++.++..|..+..          ...+
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~-~~--~~nv~~~~~d~~~g~----------~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLL-SY--YNNIKLILGDGTLGY----------EEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHH-TT--CSSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHH-hc--ccccccccCchhhcc----------hhhh
Confidence            467999999998876554   4555679999999887776655443 33  347888888875311          1235


Q ss_pred             CccEEEEcCCC
Q 023438          110 QLNILINNAGI  120 (282)
Q Consensus       110 ~id~vi~~ag~  120 (282)
                      ++|.++.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            79999988875

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.67  E-value=0.21  Score=35.25  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCC-hh---------HHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           30 SGLTAIVTGATS-GI---------GTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        30 ~~~~~lItG~s~-gI---------G~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      +-|.+||.|++. -|         +...+++|.+.|++++++..|.+......+.      ..++.   .+=-..+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~------aD~lY---fePlt~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM------ADATY---IEPIHWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG------SSEEE---CSCCCHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh------cceee---eecCCHHHHHH
Confidence            448999999852 22         5677888999999999999887653221110      12222   22334577777


Q ss_pred             HHHHHHhcCCCccEEEEcCCC
Q 023438          100 FASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~  120 (282)
                      +++.-     ++|.++-..|.
T Consensus        77 Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHH-----CCSEEECSSSH
T ss_pred             HHHHh-----CcCCeEEEeee
Confidence            77763     88999888773

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.65  E-value=0.11  Score=39.67  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=28.0

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      |+|+|| |--|..+|.+|++.|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788886 8899999999999999999998764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.60  E-value=0.034  Score=40.64  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=44.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCC-------CCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           39 ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-------SAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        39 ~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~-------~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |+|-+|+++++.|.+.+..+.+.+|+.++++++.++......       ..++.++.  +. ++.+..+++++..   +=
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~--v~-d~~i~~v~~~l~~---~~   79 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVI--VP-DRYIKTVANHLNL---GD   79 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEEC--SC-TTTHHHHHTTTCC---SS
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEe--cc-chhhhHHHhhhcc---cc
Confidence            458899999998876444456889999988877665432221       11233332  22 3566666666531   22


Q ss_pred             cEEEEcCCC
Q 023438          112 NILINNAGI  120 (282)
Q Consensus       112 d~vi~~ag~  120 (282)
                      .+++|+++.
T Consensus        80 ~ivi~~s~~   88 (153)
T d2i76a2          80 AVLVHCSGF   88 (153)
T ss_dssp             CCEEECCSS
T ss_pred             eeeeecccc
Confidence            477888874

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=90.27  E-value=1.4  Score=30.14  Aligned_cols=82  Identities=12%  Similarity=0.254  Sum_probs=53.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +|++||.--...+-..+.+.|.+.|++|..+. +.   ++..+.+.+..+  .+..+-..+-+.+.+ ++++++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~-~g---~eal~~~~~~~~--dlillD~~mP~~~G~-el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA-NG---LQALDIVTKERP--DLVLLDMKIPGMDGI-EILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SH---HHHHHHHHHHCC--SEEEEESCCTTCCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC-CH---HHHHHHHHhCCC--CEEEEeccCCCCCHH-HHHHHHHHhCCC
Confidence            58899999999999999999999999988654 32   333444444422  454444444344433 455666666666


Q ss_pred             ccEEEEcCC
Q 023438          111 LNILINNAG  119 (282)
Q Consensus       111 id~vi~~ag  119 (282)
                      +-+++.++-
T Consensus        74 ~pvi~lt~~   82 (119)
T d1peya_          74 IRVIIMTAY   82 (119)
T ss_dssp             CEEEEEESS
T ss_pred             CcEEEEecC
Confidence            677776653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.21  E-value=2.2  Score=31.22  Aligned_cols=43  Identities=14%  Similarity=-0.022  Sum_probs=27.3

Q ss_pred             EEEEecCCChhHH--HHHHHHHHc----CCEEEEEEcChhhHHHHHHHHH
Q 023438           33 TAIVTGATSGIGT--ETARVLALR----GVHVVMGVRDIAAGKDVKETIV   76 (282)
Q Consensus        33 ~~lItG~s~gIG~--aia~~l~~~----G~~Vii~~r~~~~~~~~~~~l~   76 (282)
                      .+.|.|| |.+|.  ++...|+..    +.+++++|.++++++.....+.
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~   52 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAK   52 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHH
Confidence            5677776 55554  444445532    4599999999888765444443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.18  E-value=0.13  Score=41.61  Aligned_cols=32  Identities=25%  Similarity=0.320  Sum_probs=28.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~   65 (282)
                      .|+|+|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5889988 7999999999999996 699998763

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.84  E-value=0.095  Score=40.02  Aligned_cols=31  Identities=16%  Similarity=0.139  Sum_probs=27.4

Q ss_pred             CEEEEecCCChhHHH-----HHHHHHHcCCEEEEEE
Q 023438           32 LTAIVTGATSGIGTE-----TARVLALRGVHVVMGV   62 (282)
Q Consensus        32 ~~~lItG~s~gIG~a-----ia~~l~~~G~~Vii~~   62 (282)
                      |+++|||-+.|+|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999899975     6778999999999986

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.82  E-value=0.17  Score=41.16  Aligned_cols=32  Identities=22%  Similarity=0.191  Sum_probs=24.2

Q ss_pred             CEEEEecCCChhHH-----HHHHHHHHcCCEEEEEEcC
Q 023438           32 LTAIVTGATSGIGT-----ETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        32 ~~~lItG~s~gIG~-----aia~~l~~~G~~Vii~~r~   64 (282)
                      |+++|++|+.| |.     +++++|.++|++|.+++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56677665544 55     7999999999999887754

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.82  E-value=0.96  Score=35.26  Aligned_cols=36  Identities=31%  Similarity=0.357  Sum_probs=30.5

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEE
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGV   62 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~   62 (282)
                      ..+++|++++|-| .|-+|..+|+.|.+ .|+.|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            3578999999987 69999999999985 599988665

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.64  E-value=1.9  Score=29.43  Aligned_cols=84  Identities=15%  Similarity=0.144  Sum_probs=48.5

Q ss_pred             CEEEEecCC---ChhHHHHHHHHHHcCCEEEEEEcChhhHHH--HHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           32 LTAIVTGAT---SGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        32 ~~~lItG~s---~gIG~aia~~l~~~G~~Vii~~r~~~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+....  ....+.+ .+ ..+..+.. ...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~-lp-~~~D~vvi-~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRE-LP-KDVDVIVF-VVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-SC-TTCCEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchh-cc-ccceEEEE-EeCHHHHHHHHHHHHh
Confidence            789999999   669999999999999999988654332110  0001111 11 11221111 1345666777777655


Q ss_pred             cCCCccEEEEcCCC
Q 023438          107 QHHQLNILINNAGI  120 (282)
Q Consensus       107 ~~g~id~vi~~ag~  120 (282)
                      .  .+..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            4  34456655553

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.42  E-value=0.17  Score=36.82  Aligned_cols=35  Identities=9%  Similarity=-0.046  Sum_probs=26.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC-C---EEEEEEcChh
Q 023438           32 LTAIVTGATSGIGTETARVLALRG-V---HVVMGVRDIA   66 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G-~---~Vii~~r~~~   66 (282)
                      |.+-|.||||-+|+.+.+.|+++. +   ++.+.+++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999999887653 2   6666665543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.30  E-value=0.77  Score=35.52  Aligned_cols=82  Identities=16%  Similarity=0.070  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHH-cC----CEEEEEEcChhhHHHHHHHHHHh----CCCCceeEEEccCCCHHHHHHH
Q 023438           30 SGLTAIVTGATSGIGTETARVLAL-RG----VHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNF  100 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~-~G----~~Vii~~r~~~~~~~~~~~l~~~----~~~~~v~~~~~Dvs~~~~i~~~  100 (282)
                      +|.+||.+|+++|.-.++.-+++. .|    .+|+.+.++++..+...+.+...    ..-.++.++..|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            568999999999988888877764 44    48999999988776665544321    1123688888887531      


Q ss_pred             HHHHHhcCCCccEEEEcCCCC
Q 023438          101 ASEYNIQHHQLNILINNAGIM  121 (282)
Q Consensus       101 ~~~i~~~~g~id~vi~~ag~~  121 (282)
                          ....+++|.|+.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                12245899999988853

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.27  E-value=0.16  Score=40.60  Aligned_cols=38  Identities=29%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             CCCCEEEEecCCChhHHHH-----HHHHHHcCCEEEEEEcChh
Q 023438           29 GSGLTAIVTGATSGIGTET-----ARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~ai-----a~~l~~~G~~Vii~~r~~~   66 (282)
                      -.+++++|+.|=||+|+..     |..|++.|++|.+++-+..
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3578888888899999876     7899999999999998854

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.97  E-value=2.5  Score=30.84  Aligned_cols=35  Identities=6%  Similarity=-0.144  Sum_probs=23.7

Q ss_pred             EEEEecC-CChhHHHHHHHHHHcC----CEEEEEEcChhh
Q 023438           33 TAIVTGA-TSGIGTETARVLALRG----VHVVMGVRDIAA   67 (282)
Q Consensus        33 ~~lItG~-s~gIG~aia~~l~~~G----~~Vii~~r~~~~   67 (282)
                      .+.|.|| |.|.+.+++.-+....    .++++++.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4566675 5677777776666532    389999988754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.96  E-value=0.99  Score=30.71  Aligned_cols=35  Identities=23%  Similarity=0.199  Sum_probs=28.8

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHc---CCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALR---GVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~---G~~Vii~~r~~~   66 (282)
                      .++++|.|| |.+|..+|..|.+.   |.+|.++.|...
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            489999998 89999999876654   889999987643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.80  E-value=0.3  Score=33.64  Aligned_cols=34  Identities=18%  Similarity=0.133  Sum_probs=27.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHc---CCEEEEEEcCh
Q 023438           31 GLTAIVTGATSGIGTETARVLALR---GVHVVMGVRDI   65 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~---G~~Vii~~r~~   65 (282)
                      .++++|.|| |.+|..+|..|.+.   |.+|.++.|..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999998 99999999776654   45799988754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.79  E-value=0.19  Score=37.08  Aligned_cols=31  Identities=19%  Similarity=0.165  Sum_probs=25.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEE
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMG   61 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~   61 (282)
                      +++.|+|.|| |.+|..+|..|.+.|.++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678889888 999999999999999864433

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=88.74  E-value=1.4  Score=31.00  Aligned_cols=35  Identities=26%  Similarity=0.141  Sum_probs=30.3

Q ss_pred             CCCEEEEecCC---ChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           30 SGLTAIVTGAT---SGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        30 ~~~~~lItG~s---~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      +-|++.|.|+|   +..|..+.+.|.+.|++++++--+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            45899999999   669999999999999998887543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.70  E-value=0.63  Score=33.73  Aligned_cols=44  Identities=25%  Similarity=0.283  Sum_probs=32.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHc--CCEEEEEE--cChhhHHHHHHH
Q 023438           31 GLTAIVTGATSGIGTETARVLALR--GVHVVMGV--RDIAAGKDVKET   74 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~--G~~Vii~~--r~~~~~~~~~~~   74 (282)
                      .|++.|.|+||-||.....-+.+.  .++|+.++  ++.+.+.+..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~e   49 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKR   49 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHh
Confidence            489999999999999999998875  57776554  444444444433

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.24  E-value=1.6  Score=34.12  Aligned_cols=34  Identities=24%  Similarity=0.257  Sum_probs=29.0

Q ss_pred             CCCCCEEEEecCCChhHHHHHHHHHH-cCCEEEEEE
Q 023438           28 DGSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGV   62 (282)
Q Consensus        28 ~~~~~~~lItG~s~gIG~aia~~l~~-~G~~Vii~~   62 (282)
                      +++|++++|-|- |-+|..+|+.|++ .|+.|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999998 7799999999986 588877664

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=1.7  Score=34.64  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=56.7

Q ss_pred             CCCEEEEec-CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG-~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++.+++=.| |||-||.+++.++  ...+|+.++-+...++.+.+...... -.++.+++.|+-+.-           ..
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~  173 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AG  173 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TT
T ss_pred             cccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CC
Confidence            345677667 6677888887754  35699999999998888877776542 236899999986531           12


Q ss_pred             CCccEEEEcCCCC
Q 023438          109 HQLNILINNAGIM  121 (282)
Q Consensus       109 g~id~vi~~ag~~  121 (282)
                      .++|+||.|..+.
T Consensus       174 ~~fDlIvsNPPYi  186 (274)
T d2b3ta1         174 QQFAMIVSNPPYI  186 (274)
T ss_dssp             CCEEEEEECCCCB
T ss_pred             CceeEEEecchhh
Confidence            4899999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.73  E-value=1.2  Score=29.00  Aligned_cols=68  Identities=13%  Similarity=0.087  Sum_probs=43.5

Q ss_pred             EEEEecCCChhHH-HHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           33 TAIVTGATSGIGT-ETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        33 ~~lItG~s~gIG~-aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      ++-++|- +|+|- ++|+.|.++|+.|...|+......   ++|++.  +.++. ..-|..+.              .+.
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~--Gi~i~-~gh~~~~i--------------~~~   61 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKL--GIPIF-VPHSADNW--------------YDP   61 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHT--TCCEE-SSCCTTSC--------------CCC
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHC--CCeEE-eeeccccc--------------CCC
Confidence            4556664 56665 789999999999999998754433   344443  43331 12233221              368


Q ss_pred             cEEEEcCCCC
Q 023438          112 NILINNAGIM  121 (282)
Q Consensus       112 d~vi~~ag~~  121 (282)
                      |+||.+.++.
T Consensus        62 d~vV~SsAI~   71 (89)
T d1j6ua1          62 DLVIKTPAVR   71 (89)
T ss_dssp             SEEEECTTCC
T ss_pred             CEEEEecCcC
Confidence            9999999874

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.67  E-value=1.7  Score=32.33  Aligned_cols=77  Identities=14%  Similarity=0.153  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      +++.++|=.|++.|.   .+..|+++|++|+.++-++..++...+...+. .-..+.+...|+.+..           -.
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~d~~~~~-----------~~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE-GLDNLQTDLVDLNTLT-----------FD   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEECCTTTCC-----------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc-cccchhhhheeccccc-----------cc
Confidence            456789999986554   55678899999999999988877766555443 1235777778877543           11


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|+|+.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            478998876643

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.59  E-value=0.23  Score=39.61  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=29.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .|+|.|| |-.|+.+|..|++.|.+|.++.+...
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4788888 59999999999999999999998753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.54  E-value=0.25  Score=38.46  Aligned_cols=33  Identities=24%  Similarity=0.178  Sum_probs=28.8

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcChhh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~   67 (282)
                      ++|+|| |--|..+|..|++.|++|+++.++...
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            788888 688999999999999999999987543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.25  E-value=0.35  Score=38.59  Aligned_cols=33  Identities=24%  Similarity=0.226  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEc
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR   63 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r   63 (282)
                      +.++|+|+|| |-=|+..|.+|+++|++|.++-+
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            3467999998 77789999999999999999854

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.14  E-value=0.26  Score=37.96  Aligned_cols=34  Identities=24%  Similarity=0.282  Sum_probs=29.5

Q ss_pred             CCEEEEecCCChhHHH-----HHHHHHHcCCEEEEEEcC
Q 023438           31 GLTAIVTGATSGIGTE-----TARVLALRGVHVVMGVRD   64 (282)
Q Consensus        31 ~~~~lItG~s~gIG~a-----ia~~l~~~G~~Vii~~r~   64 (282)
                      +|++.|+|+-||+|+.     +|..|++.|.+|+++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            5789999999999975     677888999999999965

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.77  E-value=0.57  Score=36.24  Aligned_cols=41  Identities=27%  Similarity=0.185  Sum_probs=32.9

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHHH--------------------cCC-EEEEEEcCh
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLAL--------------------RGV-HVVMGVRDI   65 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~~--------------------~G~-~Vii~~r~~   65 (282)
                      ....++++|+|+|+|+ |-++.-+|+-|++                    .|+ +|.+++|..
T Consensus        32 ~~~~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          32 ELAPDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             TCCCCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             ccCccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            3456788999999998 8999999999887                    465 688887764

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.65  E-value=0.66  Score=35.57  Aligned_cols=42  Identities=33%  Similarity=0.409  Sum_probs=33.7

Q ss_pred             cCCCCCCCCEEEEecCCChhHHHHHHHHH--------------------HcCC-EEEEEEcChh
Q 023438           24 TDGIDGSGLTAIVTGATSGIGTETARVLA--------------------LRGV-HVVMGVRDIA   66 (282)
Q Consensus        24 ~~~~~~~~~~~lItG~s~gIG~aia~~l~--------------------~~G~-~Vii~~r~~~   66 (282)
                      ....++.+|+|+|+|+ |-++.-+|+-|+                    +.|. +|.+++|...
T Consensus        32 ~~~~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          32 QVSPDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             TCCCCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             ccCccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            3456788999999998 889999998877                    5676 6888887643

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.61  E-value=0.3  Score=39.39  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=27.9

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      |+|+|| |..|...|.+|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            789988 8999999999999999999998653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.47  E-value=1.7  Score=32.95  Aligned_cols=76  Identities=13%  Similarity=0.025  Sum_probs=54.3

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      +.+||=.|++.|.-   +..|++.|++|+.++-++..++...+.+... ...++.++.+|..+..          -..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~~~~i~~~~~d~~~l~----------~~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQMP----------FTDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-CCC----------SCTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc-cccccccccccccccc----------ccccc
Confidence            57999999887754   3567888999999999988777665555443 2357889999987642          11247


Q ss_pred             ccEEEEcCCC
Q 023438          111 LNILINNAGI  120 (282)
Q Consensus       111 id~vi~~ag~  120 (282)
                      +|+|+++..+
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            8998887654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.01  E-value=0.23  Score=33.75  Aligned_cols=40  Identities=15%  Similarity=0.028  Sum_probs=32.4

Q ss_pred             CCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        26 ~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      ..+.+||+|+|.|+ |-=|..+|.+|+..+.++++..|...
T Consensus        27 ~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            35679999999998 47788899999998888777776543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.83  E-value=0.97  Score=32.65  Aligned_cols=36  Identities=22%  Similarity=0.140  Sum_probs=28.6

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCE-EEEEEcCh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDI   65 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~-Vii~~r~~   65 (282)
                      .-++.++|+|| |..|..+|..+.+.|++ |+++.|..
T Consensus        43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            34566888876 89999999999999985 77777653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.75  E-value=0.68  Score=34.48  Aligned_cols=33  Identities=24%  Similarity=0.168  Sum_probs=26.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~   65 (282)
                      +|.|.||||-.|..+.+.|.++-. ++..+..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            688999999999999999998764 666665443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.66  E-value=0.3  Score=38.37  Aligned_cols=31  Identities=26%  Similarity=0.260  Sum_probs=27.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      .|+|+|| |--|.+.|.+|+++|++|.++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4889998 888999999999999999999765

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.61  E-value=0.21  Score=37.34  Aligned_cols=35  Identities=14%  Similarity=0.053  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      |++.++|+|| |-.|...|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4578999998 7799999999999999999997654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=85.56  E-value=0.87  Score=33.35  Aligned_cols=83  Identities=13%  Similarity=0.137  Sum_probs=52.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHc-CCEEE-EEEcChhh-HHHHHHH--------------HHHhCCCCceeEEEccCCCHH
Q 023438           33 TAIVTGATSGIGTETARVLALR-GVHVV-MGVRDIAA-GKDVKET--------------IVKEIPSAKVDAMELDLSSLA   95 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~-G~~Vi-i~~r~~~~-~~~~~~~--------------l~~~~~~~~v~~~~~Dvs~~~   95 (282)
                      ++.|.|++|-+|+++++.+.+. +++++ .++|.... ......+              +.+.  ...+. +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~--~~~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAV--KDDFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTT--TTSCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHH--hcccc-eEEEeccHH
Confidence            6899999999999999998875 56654 33443211 0000000              0000  01122 447999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           96 SVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        96 ~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      .....++.+...  +..+|+-..|+
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999988876655  67788888885

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.53  E-value=1.8  Score=29.66  Aligned_cols=82  Identities=17%  Similarity=0.111  Sum_probs=53.1

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCH--HHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~--~~i~~~~~~i~~  106 (282)
                      |+..++||.--...+...+.+.|.+.|++|..+.. ..   +..+.+.+.    ....+.+|+.=+  +.+ ++++++++
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~-~~---~a~~~l~~~----~~dlii~D~~mp~~~G~-el~~~l~~   71 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFEN-GN---EVLAALASK----TPDVLLSDIRMPGMDGL-ALLKQIKQ   71 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESS-SH---HHHHHHTTC----CCSEEEECCSSSSSTTH-HHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCC-HH---HHHHHHHhC----CCCEEEehhhcCCchHH-HHHHHHHH
Confidence            34568999999999999999999999999886543 32   333333332    345555666532  323 34566666


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      .+..+-+++.++-
T Consensus        72 ~~~~~piI~~t~~   84 (123)
T d1krwa_          72 RHPMLPVIIMTAH   84 (123)
T ss_dssp             HSSSCCEEESCCC
T ss_pred             hCCCCeEEEEecC
Confidence            6666666665553

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.52  E-value=0.37  Score=36.83  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=27.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh
Q 023438           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~   65 (282)
                      .|+|+|| |--|.++|.+|+++|+ +|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4888988 8889999999999997 699987653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.45  E-value=0.33  Score=39.27  Aligned_cols=32  Identities=19%  Similarity=0.146  Sum_probs=28.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      -++|+|| |--|..+|++|++.|.+|.++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4788888 8889999999999999999997653

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.45  E-value=1.8  Score=32.91  Aligned_cols=88  Identities=19%  Similarity=0.109  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCChhHH-----HHHHHHHHc-----CCEEEEEEcChhhHHHHHHHHHHhCC------------CCceeEE
Q 023438           30 SGLTAIVTGATSGIGT-----ETARVLALR-----GVHVVMGVRDIAAGKDVKETIVKEIP------------SAKVDAM   87 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~-----aia~~l~~~-----G~~Vii~~r~~~~~~~~~~~l~~~~~------------~~~v~~~   87 (282)
                      ..-+++|.||||-+-+     |+.. |...     +..|+.++|+.-..++..+.+.+...            -..+.++
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~-L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWW-LFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHH-HHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHH-HHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            3468999999999865     2322 2333     46799999987665554443332111            1368889


Q ss_pred             EccCCCHHHHHHHHHHHHhcC-C-CccEEEEcC
Q 023438           88 ELDLSSLASVRNFASEYNIQH-H-QLNILINNA  118 (282)
Q Consensus        88 ~~Dvs~~~~i~~~~~~i~~~~-g-~id~vi~~a  118 (282)
                      .+|++++++.+++-+.+.... + .-..+++-|
T Consensus        98 ~~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             cCcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            999999999999877765532 1 234556655

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.05  E-value=1.8  Score=33.95  Aligned_cols=80  Identities=14%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             CCCC-CCEEEEecCCCh-hHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           27 IDGS-GLTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        27 ~~~~-~~~~lItG~s~g-IG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      .+++ |.++|=.|+++| +..++|+.+... .+|+.++++++.++.+.+.+.+.....++.+...|+.+.-         
T Consensus        81 l~i~pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~---------  150 (250)
T d1yb2a1          81 CGLRPGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI---------  150 (250)
T ss_dssp             CCCCTTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---------
T ss_pred             cCCCCcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc---------
Confidence            3443 689999996655 567777766544 4899999999998888888876544567899999987621         


Q ss_pred             HhcCCCccEEEEcC
Q 023438          105 NIQHHQLNILINNA  118 (282)
Q Consensus       105 ~~~~g~id~vi~~a  118 (282)
                        ....+|.++.+.
T Consensus       151 --~~~~fD~V~ld~  162 (250)
T d1yb2a1         151 --SDQMYDAVIADI  162 (250)
T ss_dssp             --CSCCEEEEEECC
T ss_pred             --ccceeeeeeecC
Confidence              124689988754

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=84.91  E-value=5.9  Score=29.35  Aligned_cols=142  Identities=11%  Similarity=-0.094  Sum_probs=76.1

Q ss_pred             CCCCEEEEecC--CChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~--s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      ..|+++++...  ......+++..|...|..++.+.-+..                         .+.+   .+.+.+ .
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~~---~l~~~~-~   73 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGRD---ELAERL-R   73 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCHH---HHHHHH-T
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCHH---HHHHHh-h
Confidence            34555555533  234778888889999988776543211                         1122   222222 3


Q ss_pred             cCCCccEEEEcCCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEcCCcccccccCCcccc
Q 023438          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (282)
Q Consensus       107 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  186 (282)
                      ..+.++.||+..+......+.... ..    ..+...+.++|++.    +.    ....++.+++..+...         
T Consensus        74 ~~~~~~~vv~l~~~~~~~~~~~~~-~~----~~~~~~l~l~qal~----~~----~~~~~l~~vT~~a~~~---------  131 (209)
T d2fr1a2          74 SVGEVAGVLSLLAVDEAEPEEAPL-AL----ASLADTLSLVQAMV----SA----ELGCPLWTVTESAVAT---------  131 (209)
T ss_dssp             TSCCCSEEEECTTTTCCCCSSCGG-GC----HHHHHHHHHHHHHH----HT----TCCCCEEEEEESCSCS---------
T ss_pred             ccCCCCeEEEeCCCCCCCCcchhH-HH----HHHHHHHHHHHHHH----hC----CCCCcEEEEEcCCccc---------
Confidence            345788888887754332211111 11    12344445555543    22    1245677776543221         


Q ss_pred             CCCCCCCCCCCccchHhHHHHHHHHHHHHHHhccCCCcEEEEEe
Q 023438          187 KINDPSGYNGFRAYSQSKLANILHANELARRLKEDGVDITANSV  230 (282)
Q Consensus       187 ~~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~g~~i~v~~v  230 (282)
                             ...-..-....+++-+|+++++.|+-..-  ++...+
T Consensus       132 -------~~~d~~~~p~~A~l~Gl~r~~~~E~P~l~--~~~vDl  166 (209)
T d2fr1a2         132 -------GPFERVRNAAHGALWGVGRVIALENPAVW--GGLVDV  166 (209)
T ss_dssp             -------STTSCCSCGGGHHHHHHHHHHHHHCGGGE--EEEEEE
T ss_pred             -------CCCcccCCHhHHhHHHHHHHHHHhCCCce--EEEEEC
Confidence                   11112234568889999999999987633  555444

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.77  E-value=0.46  Score=37.15  Aligned_cols=37  Identities=27%  Similarity=0.245  Sum_probs=31.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      -++|+|| |.-|...|.+|+++|.+|+++.++......
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            4788888 788899999999999999999988665443

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.70  E-value=1.5  Score=31.83  Aligned_cols=75  Identities=16%  Similarity=0.004  Sum_probs=40.3

Q ss_pred             EEEEecCCChhHHHHHHH-HHH-c----CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           33 TAIVTGATSGIGTETARV-LAL-R----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~-l~~-~----G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      .+.|.||++ +|..++-. |++ .    +.+++++|.++++++... ++........... ..- ++.+   +   .+  
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~-d~~~~~~~~~~~~-~~t-~~~~---~---~l--   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV-DFVKRLVKDRFKV-LIS-DTFE---G---AV--   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH-HHHHHHHTTSSEE-EEC-SSHH---H---HH--
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH-HHHHhhhccCceE-EEe-cCcc---c---cc--
Confidence            467888754 56555533 222 1    358999999998876543 3332211111211 111 2211   1   22  


Q ss_pred             cCCCccEEEEcCCCC
Q 023438          107 QHHQLNILINNAGIM  121 (282)
Q Consensus       107 ~~g~id~vi~~ag~~  121 (282)
                        .+-|++|..||..
T Consensus        70 --~~aDvVVita~~~   82 (162)
T d1up7a1          70 --VDAKYVIFQFRPG   82 (162)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --CCCCEEEEecccC
Confidence              2679999999964

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.66  E-value=0.45  Score=38.34  Aligned_cols=31  Identities=26%  Similarity=0.295  Sum_probs=26.8

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      |+|+|| |--|.+.|.+|+++|++|.++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            678888 7779999999999999999997643

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=84.58  E-value=2.1  Score=29.26  Aligned_cols=82  Identities=11%  Similarity=0.115  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCC--CHHHHHHHHHHHHh
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs--~~~~i~~~~~~i~~  106 (282)
                      |++.++||.-=...+...+...|.+.|++|..+ .+.+   +..+.+.+.    ....+.+|+.  +.+.+ .+++++++
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a-~~~~---~al~~~~~~----~~dlvi~D~~mp~~~G~-e~~~~lr~   71 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSAE---AFLAFAPDV----RNGVLVTDLRMPDMSGV-ELLRNLGD   71 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCHH---HHHHHGGGC----CSEEEEEECCSTTSCHH-HHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHH---HHHHHHhhc----CCcEEEEeccCccccch-HHHHHHHh
Confidence            466799999999999999999999999998654 4433   333333332    2444555665  43333 45666666


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ....+-+++.++-
T Consensus        72 ~~~~~~iI~lt~~   84 (123)
T d1dbwa_          72 LKINIPSIVITGH   84 (123)
T ss_dssp             TTCCCCEEEEECT
T ss_pred             cCCCCeEEEEEee
Confidence            6566667666653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.21  E-value=0.78  Score=34.85  Aligned_cols=45  Identities=18%  Similarity=0.148  Sum_probs=35.0

Q ss_pred             cccccCCCCCCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           20 AEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        20 ~~~~~~~~~~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      +.+.....+++||+|+|.|++ --|..||.++++.+.++..+.|..
T Consensus        21 ~~~~~~~~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          21 GNWPHEPVDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             GGCCSSCCCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CcCCCCCCCCCCCEEEEECCC-ccHHHHHHHHHhhhcccccccccc
Confidence            333333457899999999985 458999999999999988887763

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.08  E-value=0.38  Score=36.90  Aligned_cols=35  Identities=29%  Similarity=0.289  Sum_probs=29.6

Q ss_pred             CEEEEecCCChhHHH-----HHHHHHHcCCEEEEEEcChh
Q 023438           32 LTAIVTGATSGIGTE-----TARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        32 ~~~lItG~s~gIG~a-----ia~~l~~~G~~Vii~~r~~~   66 (282)
                      |++.|+++-||.|+.     +|..|++.|.+|.++|-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            789999999999874     57789999999999987643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.93  E-value=2.7  Score=28.96  Aligned_cols=77  Identities=14%  Similarity=0.045  Sum_probs=48.6

Q ss_pred             CCCEEEEecCCC-h---------hHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHH
Q 023438           30 SGLTAIVTGATS-G---------IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (282)
Q Consensus        30 ~~~~~lItG~s~-g---------IG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~   99 (282)
                      ..|.+||.|++. -         -+...+++|.+.|+++|++..|++...-..+.      ..++  +.-.+ ..+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~------aD~l--Yfepl-t~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT------SDRL--YFEPV-TLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS------SSEE--ECCCC-SHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh------cCce--EEccC-CHHHHHH
Confidence            357899999852 2         25678889999999999998887653211100      1122  22222 3466666


Q ss_pred             HHHHHHhcCCCccEEEEcCCC
Q 023438          100 FASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus       100 ~~~~i~~~~g~id~vi~~ag~  120 (282)
                      +++.-     ++|.++...|.
T Consensus        74 Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          74 IVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHH-----CCSEEECSSST
T ss_pred             HHHHh-----CCCEEEeehhh
Confidence            66553     78888888773

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.74  E-value=2.8  Score=32.96  Aligned_cols=78  Identities=13%  Similarity=0.077  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHc-CCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~-G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~  108 (282)
                      ++.++|=.|++.|.   ++..|+++ |++|+.++-++...+...+......-..++.++.+|..+..          -..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----------~~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------CED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------SCT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc----------ccc
Confidence            57899999976552   34445443 88999999998877766666655433457999999987632          122


Q ss_pred             CCccEEEEcCCC
Q 023438          109 HQLNILINNAGI  120 (282)
Q Consensus       109 g~id~vi~~ag~  120 (282)
                      +.+|+|+..-.+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            579998876543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.67  E-value=0.77  Score=32.40  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=28.5

Q ss_pred             CCEEEEecCCChhHHHHHHHHH----HcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLA----LRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~----~~G~~Vii~~r~~~   66 (282)
                      .++++|.|| |.+|..+|..|+    +.|.+|.++.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578999987 999999998886    46899999877543

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.16  E-value=3.1  Score=32.39  Aligned_cols=85  Identities=13%  Similarity=0.054  Sum_probs=58.4

Q ss_pred             CCEEEEec-CCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHH-hcC
Q 023438           31 GLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQH  108 (282)
Q Consensus        31 ~~~~lItG-~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~-~~~  108 (282)
                      ..++|=.| |||-|+..+++++  .+++++.++-+.+.++-+.+.+....-..++..+..|..+.     +++.+. ...
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~  134 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESE  134 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCS
T ss_pred             cceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhccc
Confidence            35788778 5677999999887  47899999999999888888776653345566666554321     111111 123


Q ss_pred             CCccEEEEcCCCCC
Q 023438          109 HQLNILINNAGIMG  122 (282)
Q Consensus       109 g~id~vi~~ag~~~  122 (282)
                      +++|++++|.-+..
T Consensus       135 ~~fD~ivsNPPY~~  148 (250)
T d2h00a1         135 IIYDFCMCNPPFFA  148 (250)
T ss_dssp             CCBSEEEECCCCC-
T ss_pred             CceeEEEecCcccc
Confidence            57999999998753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.16  E-value=0.75  Score=34.45  Aligned_cols=36  Identities=14%  Similarity=0.038  Sum_probs=28.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHH
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~   70 (282)
                      .+.|.| .|.+|..+|..|+ +|++|+.+|-+++..+.
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHH
Confidence            356665 7999999998775 69999999998776443

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=0.59  Score=35.35  Aligned_cols=31  Identities=16%  Similarity=0.124  Sum_probs=28.1

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ++|+|| |..|.+.|.++++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            788988 8999999999999999999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=82.93  E-value=2.8  Score=31.88  Aligned_cols=76  Identities=12%  Similarity=-0.016  Sum_probs=54.4

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~  110 (282)
                      |.+||=.|++.|.   ++..|++.|++|+.++-++..++...+...... -.++.++.+|+.+.. +         ..+.
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~~-~---------~~~~   82 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESLP-F---------PDDS   82 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBCC-S---------CTTC
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccccc-c---------cccc
Confidence            5789999988774   345667788999999999888777766665543 246889999987532 0         1257


Q ss_pred             ccEEEEcCCC
Q 023438          111 LNILINNAGI  120 (282)
Q Consensus       111 id~vi~~ag~  120 (282)
                      +|+|+++-.+
T Consensus        83 fD~v~~~~~l   92 (234)
T d1xxla_          83 FDIITCRYAA   92 (234)
T ss_dssp             EEEEEEESCG
T ss_pred             cceeeeecee
Confidence            9987776543

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=82.90  E-value=2.6  Score=32.10  Aligned_cols=71  Identities=17%  Similarity=0.303  Sum_probs=56.2

Q ss_pred             HHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCccEEEEcCCC
Q 023438           46 ETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI  120 (282)
Q Consensus        46 aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~id~vi~~ag~  120 (282)
                      +|-+++ ++|..|++++-.-+..++..+.+.+.+|+.++..+.+.+++ ++.++.+....+  |++|++|++.=+
T Consensus        23 ~I~~El-~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~-~eke~im~~F~~--g~~~ILv~TtvI   93 (211)
T d2eyqa5          23 AILREI-LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH--QRFNVLVCTTII   93 (211)
T ss_dssp             HHHHHH-TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCH-HHHHHHHHHHHT--TSCCEEEESSTT
T ss_pred             HHHHHH-HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCH-HHHHHHHHHHHc--CCcceEEEehhh
Confidence            344444 46889999998888889999999999998899999999975 567777776654  489999998753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.72  E-value=0.63  Score=35.18  Aligned_cols=31  Identities=16%  Similarity=0.046  Sum_probs=27.6

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      ++|+|| |..|.+.|..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789998 6789999999999999999998754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=82.54  E-value=0.79  Score=34.22  Aligned_cols=34  Identities=26%  Similarity=0.275  Sum_probs=27.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC-EEEEEEcCh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~-~Vii~~r~~   65 (282)
                      -+|.|.||||-.|..+.+.|.++-. ++..+..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~   40 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADR   40 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECST
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccc
Confidence            3699999999999999999998764 766565443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=82.42  E-value=0.61  Score=33.68  Aligned_cols=32  Identities=9%  Similarity=0.044  Sum_probs=24.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHcC----CEEEEEEcC
Q 023438           33 TAIVTGATSGIGTETARVLALRG----VHVVMGVRD   64 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G----~~Vii~~r~   64 (282)
                      ++.|.||||-.|..+.+.|.++.    .++..++.+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            58899999999999999887643    366655544

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.32  E-value=4.4  Score=29.73  Aligned_cols=77  Identities=10%  Similarity=0.060  Sum_probs=52.5

Q ss_pred             CCCCEEE-EecCCChhHHHHHHHHHHcCC-EEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHh
Q 023438           29 GSGLTAI-VTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (282)
Q Consensus        29 ~~~~~~l-ItG~s~gIG~aia~~l~~~G~-~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~  106 (282)
                      +++.++| +..|||.+|.+    ++++|+ +|+.++.+....+.+.+.+... ...++..+..|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~-~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhc-cccceeeeeeccc---------ccccc
Confidence            5778888 44456666654    566888 6999999999888877777553 2346777776642         22333


Q ss_pred             cCCCccEEEEcCC
Q 023438          107 QHHQLNILINNAG  119 (282)
Q Consensus       107 ~~g~id~vi~~ag  119 (282)
                      ...++|+|+....
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            4457899998864

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.82  E-value=0.56  Score=38.04  Aligned_cols=31  Identities=19%  Similarity=0.341  Sum_probs=27.5

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcCh
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~   65 (282)
                      |+|+|+ |.-|...|.+|++.|++|+++.+..
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 8889999999999999999998653

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.77  E-value=4  Score=32.64  Aligned_cols=30  Identities=10%  Similarity=0.104  Sum_probs=24.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEE
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGV   62 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~   62 (282)
                      ..+|++.+|.-|.++|...+..|..++++-
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~   99 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIM   99 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecc
Confidence            458888999999999999888888655443

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=81.49  E-value=5.8  Score=26.69  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=52.5

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      |++||.--..-+-..+...|.+.|++|..+. +.   ++..+.+.+..  ..+..+-..+-+.+.++ ++.+++......
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~---~~al~~l~~~~--~dlillD~~mp~~~G~~-~~~~~r~~~~~~   75 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITAS-DG---EEALKKAETEK--PDLIVLDVMLPKLDGIE-VCKQLRQQKLMF   75 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SH---HHHHHHHHHHC--CSEEEEESSCSSSCHHH-HHHHHHHTTCCC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CH---HHHHHHHhccc--ccEEEecccccCCCCch-hhhhhhccCCCC
Confidence            6899999999999999999999999988654 33   33344444442  24555544444544443 455666655556


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      .+++..+.
T Consensus        76 ~ii~lt~~   83 (121)
T d1mvoa_          76 PILMLTAK   83 (121)
T ss_dssp             CEEEEECT
T ss_pred             EEEEEEee
Confidence            66665553

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=81.25  E-value=2.9  Score=31.33  Aligned_cols=46  Identities=13%  Similarity=0.188  Sum_probs=28.4

Q ss_pred             CEEE-EecCCChhHH-----HHHHHHHH----cCCEEEEEEcChhhHHHHHHHHHH
Q 023438           32 LTAI-VTGATSGIGT-----ETARVLAL----RGVHVVMGVRDIAAGKDVKETIVK   77 (282)
Q Consensus        32 ~~~l-ItG~s~gIG~-----aia~~l~~----~G~~Vii~~r~~~~~~~~~~~l~~   77 (282)
                      ++++ |.||||.+-+     |+-..+.+    ..+.|+.++|+....++..+.+.+
T Consensus         5 ~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~   60 (195)
T d1h9aa1           5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRD   60 (195)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHH
T ss_pred             ceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHH
Confidence            4444 7899999875     33333222    235788999987766665544443

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.13  E-value=0.63  Score=37.69  Aligned_cols=31  Identities=19%  Similarity=0.317  Sum_probs=27.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      -|+|+|+ |.-|...|.++++.|++|+++.+.
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3888887 889999999999999999999764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.04  E-value=1.1  Score=32.37  Aligned_cols=26  Identities=31%  Similarity=0.524  Sum_probs=23.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCC
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGV   56 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~   56 (282)
                      |-+|.|.||||-+|..+.+.|.++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            34789999999999999999998864

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.81  E-value=6  Score=26.71  Aligned_cols=81  Identities=14%  Similarity=0.201  Sum_probs=52.1

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      .++||.--...+...+.+.|.+.|++|..+. +.   ++..+.+.+..  ..+..+-..+-+.+. -++++++++....+
T Consensus         2 PkILiVDD~~~~~~~l~~~L~~~g~~v~~a~-~~---~eal~~~~~~~--~dlvl~D~~mP~~~G-~el~~~ir~~~~~~   74 (121)
T d1ys7a2           2 PRVLVVDDDSDVLASLERGLRLSGFEVATAV-DG---AEALRSATENR--PDAIVLDINMPVLDG-VSVVTALRAMDNDV   74 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SH---HHHHHHHHHSC--CSEEEEESSCSSSCH-HHHHHHHHHTTCCC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CH---HHHHHHHHhCC--CCEEEEEeeccCccc-HHHHHHHHhcCCCC
Confidence            3689999999999999999999999988654 43   34444444432  234444333444443 34556666666667


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      -+++.++-
T Consensus        75 piI~lt~~   82 (121)
T d1ys7a2          75 PVCVLSAR   82 (121)
T ss_dssp             CEEEEECC
T ss_pred             EEEEEEee
Confidence            77776654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.70  E-value=0.39  Score=35.95  Aligned_cols=34  Identities=9%  Similarity=-0.053  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      +.+.++|+|| |..|...|..+++.|.+++++.+.
T Consensus         4 ~~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           4 HNTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ccceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            3478999998 679999999999999999988754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.67  E-value=4.8  Score=29.61  Aligned_cols=78  Identities=21%  Similarity=0.131  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHh-CCCCceeEEEccCCCHHHHHHHHHHHHhc
Q 023438           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (282)
Q Consensus        29 ~~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~  107 (282)
                      .+++++|=.|++.|   .++..|++.+.+|+.++-+....+...+.+... ....++.++..|+.+.-           .
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-----------~  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-----------K  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-----------T
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-----------c
Confidence            36789998887766   334456677889999999988877776666543 22345888888986421           1


Q ss_pred             CCCccEEEEcCCC
Q 023438          108 HHQLNILINNAGI  120 (282)
Q Consensus       108 ~g~id~vi~~ag~  120 (282)
                      .+.+|+|+++..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            2378999988653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.51  E-value=0.8  Score=37.30  Aligned_cols=34  Identities=24%  Similarity=0.151  Sum_probs=27.8

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcC--CEEEEEEcChh
Q 023438           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA   66 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G--~~Vii~~r~~~   66 (282)
                      |+|+|+|| |-=|.++|..|+++|  ++|++..|+..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            78999988 677788888998877  58999988753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.48  E-value=0.14  Score=39.56  Aligned_cols=25  Identities=36%  Similarity=0.337  Sum_probs=22.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEE
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHV   58 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~V   58 (282)
                      +|+|+|| |-+|..+|.+|+++|++|
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            5889998 899999999999999754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.41  E-value=0.89  Score=34.49  Aligned_cols=33  Identities=15%  Similarity=0.096  Sum_probs=28.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        33 ~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      -++|+|| |.-|...|.++++.|.+|+++.+...
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            3788998 66699999999999999999987543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=80.32  E-value=6.7  Score=29.95  Aligned_cols=87  Identities=10%  Similarity=0.031  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCC
Q 023438           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (282)
Q Consensus        30 ~~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g  109 (282)
                      +-|++|=+|...|......-+-...+.+|+.+..+.+......+.+.+.....++..+..|..  +.+.++.+. ....+
T Consensus        59 ~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~--~~L~~l~~~-~~~~~  135 (227)
T d1susa1          59 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL--PVLDEMIKD-EKNHG  135 (227)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH--HHHHHHHHC-GGGTT
T ss_pred             CCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHH--HHHHHHHhc-cccCC
Confidence            568999999887776655444344567999999999887777777766533456777777663  334444332 22346


Q ss_pred             CccEEEEcCC
Q 023438          110 QLNILINNAG  119 (282)
Q Consensus       110 ~id~vi~~ag  119 (282)
                      .+|.++..|.
T Consensus       136 ~fD~iFiDa~  145 (227)
T d1susa1         136 SYDFIFVDAD  145 (227)
T ss_dssp             CBSEEEECSC
T ss_pred             ceeEEEeccc
Confidence            8999998874

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.31  E-value=0.78  Score=33.51  Aligned_cols=30  Identities=17%  Similarity=0.249  Sum_probs=26.7

Q ss_pred             EEEecCCChhHHHHHHHHHHcCCEEEEEEcC
Q 023438           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (282)
Q Consensus        34 ~lItG~s~gIG~aia~~l~~~G~~Vii~~r~   64 (282)
                      ++|+|| |-.|...|..+++.|.+|+++.+.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            678887 899999999999999999999764

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=80.25  E-value=3.3  Score=28.03  Aligned_cols=82  Identities=13%  Similarity=0.074  Sum_probs=52.9

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHHHhcCCCc
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i~~~~g~i  111 (282)
                      .++||.--..-+...+...|.+.|++|..+....    +..+.+.+.. ...+..+-..+-+.+ --++++++++....+
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~----~al~~l~~~~-~~dliilD~~lp~~~-G~el~~~ir~~~~~~   76 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGS----AFFQHRSQLS-TCDLLIVSDQLVDLS-IFSLLDIVKEQTKQP   76 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHTGGGGG-SCSEEEEETTCTTSC-HHHHHHHHTTSSSCC
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHH----HHHHHHHhcC-CCCEEEEeCCCCCCC-HHHHHHHHHhcCCCC
Confidence            5789999999999999999999999988765322    2233332221 123444444443433 345677887776667


Q ss_pred             cEEEEcCC
Q 023438          112 NILINNAG  119 (282)
Q Consensus       112 d~vi~~ag  119 (282)
                      -+++..+.
T Consensus        77 pii~lt~~   84 (118)
T d2b4aa1          77 SVLILTTG   84 (118)
T ss_dssp             EEEEEESC
T ss_pred             cEEEEECC
Confidence            77777654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.22  E-value=1.3  Score=31.56  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=27.0

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCC---EEEEEEcCh
Q 023438           32 LTAIVTGATSGIGTETARVLALRGV---HVVMGVRDI   65 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~---~Vii~~r~~   65 (282)
                      ..|.|.||||-+|+.+.+.|.++++   ++..++.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            3689999999999999999987653   677665543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.19  E-value=0.83  Score=36.91  Aligned_cols=35  Identities=20%  Similarity=0.022  Sum_probs=30.0

Q ss_pred             CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChh
Q 023438           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        31 ~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~   66 (282)
                      .-.|+|+|| |--|.++|.+|.+.|.+|.++.+...
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            346899998 78899999999999999999987654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.15  E-value=2  Score=32.52  Aligned_cols=81  Identities=10%  Similarity=0.072  Sum_probs=53.5

Q ss_pred             CCCCC-CCEEEEecCCChhHHHHHHHHHHcCCEEEEEEcChhhHHHHHHHHHHhCCCCceeEEEccCCCHHHHHHHHHHH
Q 023438           26 GIDGS-GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (282)
Q Consensus        26 ~~~~~-~~~~lItG~s~gIG~aia~~l~~~G~~Vii~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~i~~~~~~i  104 (282)
                      +++++ |.+||=.|++.|.-......+...| .|+.++-++..++.+.+.....   .++.++..|..+++....     
T Consensus        51 ~l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~---~ni~~i~~d~~~~~~~~~-----  121 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSG-----  121 (209)
T ss_dssp             CCCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTT-----
T ss_pred             cCCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc---CCceEEEeeccCcccccc-----
Confidence            45554 6899999988775433333333344 8999999998888777665442   378889899988664322     


Q ss_pred             HhcCCCccEEEEc
Q 023438          105 NIQHHQLNILINN  117 (282)
Q Consensus       105 ~~~~g~id~vi~~  117 (282)
                        .+..+|++++.
T Consensus       122 --~~~~vd~v~~~  132 (209)
T d1nt2a_         122 --IVEKVDLIYQD  132 (209)
T ss_dssp             --TCCCEEEEEEC
T ss_pred             --ccceEEEEEec
Confidence              22356776664

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.15  E-value=0.55  Score=37.02  Aligned_cols=34  Identities=21%  Similarity=0.225  Sum_probs=28.2

Q ss_pred             CEEEEecCCChhHHH-----HHHHHHHcCCEEEEEEcChh
Q 023438           32 LTAIVTGATSGIGTE-----TARVLALRGVHVVMGVRDIA   66 (282)
Q Consensus        32 ~~~lItG~s~gIG~a-----ia~~l~~~G~~Vii~~r~~~   66 (282)
                      |+|.|+| =||+|+.     +|..|++.|++|.++|-+..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788898 8888875     45689999999999998854

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.08  E-value=8.3  Score=30.32  Aligned_cols=30  Identities=23%  Similarity=0.273  Sum_probs=22.7

Q ss_pred             CEEEEecCCChhHHHHHHHHHHcCCEEEEE
Q 023438           32 LTAIVTGATSGIGTETARVLALRGVHVVMG   61 (282)
Q Consensus        32 ~~~lItG~s~gIG~aia~~l~~~G~~Vii~   61 (282)
                      .+.+|+.++|.-|.++|-..+..|.+++++
T Consensus        61 ~~~vv~assGn~g~a~A~~a~~~g~~~~i~   90 (302)
T d1fcja_          61 GVELVEPTNGNTGIALAYVAAARGYKLTLT   90 (302)
T ss_dssp             TCEEEEECSSHHHHHHHHHHHHHTCCEEEE
T ss_pred             CceEEEeccccchhHHHHHHHHhccCCceE
Confidence            367888899999999998777777654443