Query 023442
Match_columns 282
No_of_seqs 253 out of 2106
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:51:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 3.9E-41 1.3E-45 316.0 23.9 228 2-240 89-316 (350)
2 1vhn_A Putative flavin oxidore 100.0 1.1E-38 3.9E-43 295.4 18.3 219 2-241 89-309 (318)
3 4ef8_A Dihydroorotate dehydrog 99.9 1.7E-23 5.7E-28 196.3 9.7 140 2-156 161-320 (354)
4 3zwt_A Dihydroorotate dehydrog 99.9 2E-22 6.8E-27 189.9 12.4 139 2-156 182-341 (367)
5 3oix_A Putative dihydroorotate 99.9 2.7E-22 9.3E-27 187.5 8.9 134 2-152 161-315 (345)
6 3i65_A Dihydroorotate dehydrog 99.8 6E-21 2E-25 181.7 10.6 136 2-152 217-385 (415)
7 3gr7_A NADPH dehydrogenase; fl 99.8 3.8E-20 1.3E-24 172.7 15.9 147 2-158 163-322 (340)
8 1jub_A Dihydroorotate dehydrog 99.8 2E-20 6.9E-25 171.8 12.5 140 2-156 126-285 (311)
9 1z41_A YQJM, probable NADH-dep 99.8 5.2E-20 1.8E-24 171.6 15.3 148 2-158 163-322 (338)
10 2e6f_A Dihydroorotate dehydrog 99.8 2.1E-20 7.1E-25 172.0 10.7 140 2-156 128-287 (314)
11 1f76_A Dihydroorotate dehydrog 99.8 4E-20 1.4E-24 171.8 11.3 143 2-157 171-333 (336)
12 1vyr_A Pentaerythritol tetrani 99.8 3.6E-19 1.2E-23 167.6 15.8 141 2-157 180-337 (364)
13 2r14_A Morphinone reductase; H 99.8 3.1E-19 1.1E-23 168.7 14.9 142 2-157 185-342 (377)
14 3kru_A NADH:flavin oxidoreduct 99.8 3.3E-19 1.1E-23 166.5 14.1 142 4-156 173-320 (343)
15 1tv5_A Dhodehase, dihydroorota 99.8 1.4E-19 4.6E-24 174.1 11.6 139 2-156 215-416 (443)
16 2hsa_B 12-oxophytodienoate red 99.8 2.9E-19 9.9E-24 170.2 13.7 149 2-157 190-362 (402)
17 1icp_A OPR1, 12-oxophytodienoa 99.8 2.3E-19 7.8E-24 169.6 12.8 143 2-157 186-344 (376)
18 2gou_A Oxidoreductase, FMN-bin 99.8 1.4E-18 4.8E-23 163.6 16.3 141 2-157 180-336 (365)
19 3hgj_A Chromate reductase; TIM 99.8 1.3E-18 4.5E-23 162.8 15.8 148 2-158 171-333 (349)
20 3gka_A N-ethylmaleimide reduct 99.8 1.2E-18 4.2E-23 163.7 12.6 135 2-157 180-330 (361)
21 1gte_A Dihydropyrimidine dehyd 99.8 1.1E-18 3.8E-23 183.3 13.2 140 2-154 667-828 (1025)
22 4ab4_A Xenobiotic reductase B; 99.8 1.6E-18 5.4E-23 163.0 12.8 135 2-157 172-322 (362)
23 3l5a_A NADH/flavin oxidoreduct 99.8 9.9E-19 3.4E-23 167.3 10.5 145 2-157 189-360 (419)
24 1ep3_A Dihydroorotate dehydrog 99.7 5.5E-18 1.9E-22 155.0 12.5 135 2-152 131-280 (311)
25 3l5l_A Xenobiotic reductase A; 99.7 9.4E-18 3.2E-22 157.8 14.2 145 6-158 190-340 (363)
26 3aty_A Tcoye, prostaglandin F2 99.7 3.7E-17 1.3E-21 154.6 14.6 139 2-157 194-350 (379)
27 1o94_A Tmadh, trimethylamine d 99.7 3.4E-17 1.2E-21 166.4 12.0 147 2-157 168-335 (729)
28 1ps9_A 2,4-dienoyl-COA reducta 99.7 6.9E-17 2.4E-21 162.4 13.3 150 2-157 160-324 (671)
29 3k30_A Histamine dehydrogenase 99.7 4.5E-17 1.5E-21 164.4 10.3 136 13-157 195-338 (690)
30 3tjl_A NADPH dehydrogenase; OL 99.7 9.9E-17 3.4E-21 152.6 7.3 144 2-157 187-360 (407)
31 3tjx_A Dihydroorotate dehydrog 99.6 1.2E-15 4E-20 142.9 11.1 137 2-152 161-317 (354)
32 2nli_A Lactate oxidase; flavoe 99.6 6.8E-15 2.3E-19 138.6 10.7 149 18-202 202-358 (368)
33 1p0k_A Isopentenyl-diphosphate 99.6 3.1E-14 1.1E-18 132.8 13.5 168 2-201 146-324 (349)
34 2y88_A Phosphoribosyl isomeras 99.6 1.1E-14 3.6E-19 128.7 9.8 133 3-157 94-239 (244)
35 2agk_A 1-(5-phosphoribosyl)-5- 99.5 5.3E-15 1.8E-19 133.1 7.3 130 4-156 95-252 (260)
36 2yzr_A Pyridoxal biosynthesis 99.5 1E-14 3.4E-19 134.1 9.1 135 6-151 45-282 (330)
37 2nzl_A Hydroxyacid oxidase 1; 99.5 4E-14 1.4E-18 134.3 11.1 139 20-190 229-371 (392)
38 1kbi_A Cytochrome B2, L-LCR; f 99.5 5.2E-14 1.8E-18 137.7 9.3 145 23-203 326-478 (511)
39 3sgz_A Hydroxyacid oxidase 2; 99.5 2.7E-14 9.1E-19 133.5 6.8 149 23-207 200-351 (352)
40 3o07_A Pyridoxine biosynthesis 99.5 2.6E-13 8.8E-18 121.8 12.6 131 1-150 36-237 (291)
41 1gox_A (S)-2-hydroxy-acid oxid 99.5 8.1E-14 2.8E-18 131.3 8.8 146 22-203 207-355 (370)
42 1vzw_A Phosphoribosyl isomeras 99.4 5.9E-13 2E-17 117.6 11.8 134 2-156 94-235 (244)
43 1p4c_A L(+)-mandelate dehydrog 99.4 1.7E-13 5.9E-18 129.5 8.9 143 24-203 209-353 (380)
44 3tdn_A FLR symmetric alpha-bet 99.4 1.7E-14 5.7E-19 128.1 0.1 124 17-156 107-242 (247)
45 1jvn_A Glutamine, bifunctional 99.4 4.4E-13 1.5E-17 132.4 9.3 123 18-158 380-541 (555)
46 1vcf_A Isopentenyl-diphosphate 99.3 9.1E-12 3.1E-16 115.4 12.6 137 28-190 170-319 (332)
47 1ka9_F Imidazole glycerol phos 99.3 7.7E-12 2.6E-16 110.7 10.6 122 17-156 103-238 (252)
48 1qo2_A Molecule: N-((5-phospho 99.3 1.7E-12 5.7E-17 114.7 6.1 127 2-152 92-233 (241)
49 1mzh_A Deoxyribose-phosphate a 99.3 1.1E-11 3.8E-16 109.0 10.7 103 24-144 100-206 (225)
50 1thf_D HISF protein; thermophI 99.3 1.4E-11 4.8E-16 109.1 10.8 121 17-152 102-234 (253)
51 2w6r_A Imidazole glycerol phos 99.2 2E-11 6.8E-16 109.0 7.9 123 17-157 102-243 (266)
52 4a3u_A NCR, NADH\:flavin oxido 99.2 1.1E-10 3.9E-15 109.3 11.1 134 12-157 189-329 (358)
53 3tdn_A FLR symmetric alpha-bet 99.2 9.9E-11 3.4E-15 103.7 9.9 100 43-157 22-122 (247)
54 4gbu_A NADPH dehydrogenase 1; 99.1 1.6E-10 5.5E-15 109.8 10.3 139 12-157 209-362 (400)
55 3vkj_A Isopentenyl-diphosphate 99.1 2.3E-10 7.9E-15 107.6 10.7 146 28-200 175-338 (368)
56 1h5y_A HISF; histidine biosynt 99.1 6.4E-10 2.2E-14 97.4 11.2 121 17-151 105-236 (253)
57 3sr7_A Isopentenyl-diphosphate 99.0 1.1E-09 3.8E-14 102.8 11.4 111 25-146 191-311 (365)
58 2nv1_A Pyridoxal biosynthesis 99.0 2E-10 6.9E-15 105.1 6.3 133 6-149 49-245 (305)
59 3q58_A N-acetylmannosamine-6-p 99.0 2.2E-09 7.6E-14 94.6 10.6 107 23-154 113-221 (229)
60 3igs_A N-acetylmannosamine-6-p 98.9 3.6E-09 1.2E-13 93.4 10.7 107 22-153 112-220 (232)
61 1eep_A Inosine 5'-monophosphat 98.9 1.6E-09 5.6E-14 102.8 8.7 110 24-152 177-295 (404)
62 2z6i_A Trans-2-enoyl-ACP reduc 98.9 6.8E-09 2.3E-13 96.0 11.0 100 30-151 101-200 (332)
63 1qo2_A Molecule: N-((5-phospho 98.9 1.8E-09 6.1E-14 95.1 6.6 101 43-156 13-115 (241)
64 1ypf_A GMP reductase; GUAC, pu 98.9 3.3E-09 1.1E-13 98.4 8.3 107 24-148 132-245 (336)
65 1yxy_A Putative N-acetylmannos 98.9 1.1E-08 3.6E-13 89.6 10.5 102 27-151 119-223 (234)
66 4gj1_A 1-(5-phosphoribosyl)-5- 98.8 3.2E-08 1.1E-12 87.8 12.0 127 2-151 94-233 (243)
67 1y0e_A Putative N-acetylmannos 98.8 3.7E-08 1.3E-12 85.4 10.9 110 24-153 101-214 (223)
68 1jcn_A Inosine monophosphate d 98.8 1.2E-07 4.2E-12 92.4 15.6 114 24-152 279-397 (514)
69 4fxs_A Inosine-5'-monophosphat 98.7 1.2E-08 4E-13 99.5 7.1 107 24-149 255-370 (496)
70 3ffs_A Inosine-5-monophosphate 98.7 3.5E-08 1.2E-12 93.6 9.5 109 24-151 168-284 (400)
71 3khj_A Inosine-5-monophosphate 98.7 2.2E-08 7.5E-13 93.9 6.8 108 24-151 129-245 (361)
72 1thf_D HISF protein; thermophI 98.7 4.9E-08 1.7E-12 86.1 8.4 81 65-156 36-116 (253)
73 3bw2_A 2-nitropropane dioxygen 98.6 2.8E-07 9.7E-12 86.2 13.2 109 30-152 136-247 (369)
74 4avf_A Inosine-5'-monophosphat 98.6 3.8E-08 1.3E-12 95.7 6.9 107 24-149 253-368 (490)
75 2qr6_A IMP dehydrogenase/GMP r 98.6 6.2E-08 2.1E-12 91.5 8.2 99 32-150 203-314 (393)
76 3r2g_A Inosine 5'-monophosphat 98.6 6.7E-08 2.3E-12 90.5 8.0 105 25-150 125-236 (361)
77 1vrd_A Inosine-5'-monophosphat 98.6 9.6E-08 3.3E-12 92.7 8.7 109 24-151 261-378 (494)
78 2gjl_A Hypothetical protein PA 98.6 6.6E-07 2.3E-11 82.3 13.5 101 30-150 109-209 (328)
79 1ka9_F Imidazole glycerol phos 98.5 1.8E-07 6.1E-12 82.4 8.2 81 65-156 37-117 (252)
80 4fo4_A Inosine 5'-monophosphat 98.5 1.3E-07 4.4E-12 88.8 7.3 109 24-151 132-249 (366)
81 3bo9_A Putative nitroalkan dio 98.5 7.9E-07 2.7E-11 82.0 12.0 99 31-151 116-214 (326)
82 2y88_A Phosphoribosyl isomeras 98.5 3.4E-07 1.2E-11 80.2 8.4 77 65-152 37-113 (244)
83 1vzw_A Phosphoribosyl isomeras 98.5 3.6E-07 1.2E-11 80.2 8.1 77 65-152 38-114 (244)
84 3usb_A Inosine-5'-monophosphat 98.4 2.4E-07 8E-12 90.6 6.3 106 24-149 280-395 (511)
85 2qjg_A Putative aldolase MJ040 98.4 3.6E-06 1.2E-10 75.1 12.7 105 28-152 134-247 (273)
86 1h5y_A HISF; histidine biosynt 98.4 9E-07 3.1E-11 77.1 8.2 78 65-152 39-116 (253)
87 2c6q_A GMP reductase 2; TIM ba 98.3 9.7E-07 3.3E-11 82.3 8.5 106 24-149 144-259 (351)
88 1wv2_A Thiazole moeity, thiazo 98.3 9.7E-06 3.3E-10 72.2 13.9 77 65-151 149-227 (265)
89 2pgw_A Muconate cycloisomerase 98.3 6.2E-06 2.1E-10 77.4 13.3 107 24-152 173-281 (384)
90 4adt_A Pyridoxine biosynthetic 98.3 4.8E-06 1.6E-10 75.9 12.1 49 101-150 196-246 (297)
91 3cwo_X Beta/alpha-barrel prote 98.3 4.9E-06 1.7E-10 71.0 10.5 79 67-158 138-218 (237)
92 2zbt_A Pyridoxal biosynthesis 98.2 5.9E-06 2E-10 74.8 10.9 49 100-149 195-245 (297)
93 3qja_A IGPS, indole-3-glycerol 98.1 2.9E-05 1E-09 69.9 13.0 104 24-151 147-251 (272)
94 2w6r_A Imidazole glycerol phos 98.1 3.6E-06 1.2E-10 74.6 6.5 78 65-152 36-116 (266)
95 2qr6_A IMP dehydrogenase/GMP r 98.1 1.6E-05 5.5E-10 74.8 10.3 103 24-145 140-242 (393)
96 1ea0_A Glutamate synthase [NAD 98.0 2.3E-05 7.7E-10 84.1 12.1 113 24-147 976-1098(1479)
97 3tsm_A IGPS, indole-3-glycerol 98.0 0.00011 3.7E-09 66.2 14.7 114 24-162 154-268 (272)
98 2ovl_A Putative racemase; stru 98.0 2.3E-05 7.7E-10 73.2 10.5 107 24-152 173-282 (371)
99 1zfj_A Inosine monophosphate d 98.0 1.4E-05 4.8E-10 77.2 8.8 109 24-151 257-374 (491)
100 1ofd_A Ferredoxin-dependent gl 98.0 1.8E-05 6E-10 85.1 10.0 116 23-149 1010-1135(1520)
101 1yad_A Regulatory protein TENI 98.0 2E-05 6.9E-10 68.0 8.4 73 68-150 126-200 (221)
102 1me8_A Inosine-5'-monophosphat 97.9 1.6E-05 5.5E-10 77.4 8.2 103 25-147 267-386 (503)
103 1mdl_A Mandelate racemase; iso 97.9 5.4E-05 1.9E-09 70.2 11.0 105 24-150 171-278 (359)
104 1rvk_A Isomerase/lactonizing e 97.8 0.00026 8.8E-09 66.1 13.3 108 21-150 179-290 (382)
105 3vzx_A Heptaprenylglyceryl pho 97.8 0.00017 5.9E-09 63.2 11.1 74 64-152 145-218 (228)
106 2rdx_A Mandelate racemase/muco 97.8 0.00017 5.9E-09 67.3 11.7 103 24-151 171-276 (379)
107 3f4w_A Putative hexulose 6 pho 97.8 3.5E-05 1.2E-09 65.8 6.4 106 26-151 90-196 (211)
108 1xg4_A Probable methylisocitra 97.8 4.5E-05 1.5E-09 69.4 7.3 125 2-147 113-240 (295)
109 3vk5_A MOEO5; TIM barrel, tran 97.8 3.5E-05 1.2E-09 69.5 6.4 58 98-156 211-271 (286)
110 3eez_A Putative mandelate race 97.7 0.0002 6.7E-09 67.1 11.1 104 24-152 171-277 (378)
111 3oa3_A Aldolase; structural ge 97.7 0.00032 1.1E-08 63.5 11.7 119 17-147 149-270 (288)
112 1xi3_A Thiamine phosphate pyro 97.7 8.4E-05 2.9E-09 63.3 7.5 76 68-151 124-199 (215)
113 3ozy_A Putative mandelate race 97.7 0.00029 1E-08 66.2 11.8 103 24-148 177-283 (389)
114 1vc4_A Indole-3-glycerol phosp 97.7 4.1E-05 1.4E-09 68.2 5.5 50 101-151 192-245 (254)
115 2qdd_A Mandelate racemase/muco 97.6 0.00026 8.8E-09 66.1 10.6 103 24-152 172-277 (378)
116 1nu5_A Chloromuconate cycloiso 97.6 0.00049 1.7E-08 63.9 12.4 105 24-150 170-277 (370)
117 1w8s_A FBP aldolase, fructose- 97.6 0.0011 3.8E-08 59.1 14.0 109 25-151 120-240 (263)
118 4gj1_A 1-(5-phosphoribosyl)-5- 97.6 8.9E-05 3E-09 65.5 6.3 81 65-156 37-117 (243)
119 1rd5_A Tryptophan synthase alp 97.6 0.00043 1.5E-08 61.3 10.9 46 101-147 190-235 (262)
120 2nql_A AGR_PAT_674P, isomerase 97.6 0.00027 9.3E-09 66.2 9.9 104 24-151 191-297 (388)
121 2p8b_A Mandelate racemase/muco 97.6 0.00043 1.5E-08 64.3 11.1 106 24-151 167-276 (369)
122 2poz_A Putative dehydratase; o 97.6 0.00021 7.1E-09 67.1 9.0 103 17-141 174-279 (392)
123 3o63_A Probable thiamine-phosp 97.6 0.0002 6.7E-09 63.4 8.1 77 68-151 151-228 (243)
124 2tps_A Protein (thiamin phosph 97.5 0.00021 7.1E-09 61.5 8.1 73 68-150 132-208 (227)
125 2hzg_A Mandelate racemase/muco 97.5 0.00065 2.2E-08 63.9 11.6 107 24-152 174-287 (401)
126 1xm3_A Thiazole biosynthesis p 97.5 0.00025 8.5E-09 63.3 8.1 49 101-150 167-215 (264)
127 2gl5_A Putative dehydratase pr 97.5 0.00037 1.3E-08 65.7 9.6 104 16-141 191-298 (410)
128 3ndo_A Deoxyribose-phosphate a 97.5 0.00057 1.9E-08 60.0 10.1 119 17-147 103-226 (231)
129 3rcy_A Mandelate racemase/muco 97.5 0.0005 1.7E-08 65.6 10.5 107 22-150 183-292 (433)
130 1viz_A PCRB protein homolog; s 97.5 0.00018 6.1E-09 63.6 6.5 56 100-157 169-225 (240)
131 2qgy_A Enolase from the enviro 97.4 0.00087 3E-08 62.9 11.4 104 25-150 177-283 (391)
132 3r12_A Deoxyribose-phosphate a 97.4 0.0015 5.1E-08 58.3 11.5 115 17-147 134-252 (260)
133 2htm_A Thiazole biosynthesis p 97.4 0.00055 1.9E-08 61.1 8.4 47 101-147 165-212 (268)
134 2f6u_A GGGPS, (S)-3-O-geranylg 97.3 0.00025 8.5E-09 62.4 5.8 52 100-152 177-228 (234)
135 3i4k_A Muconate lactonizing en 97.3 0.0029 9.8E-08 59.2 12.9 102 24-147 176-280 (383)
136 3ngj_A Deoxyribose-phosphate a 97.3 0.0012 4.2E-08 58.1 9.6 115 17-147 118-236 (239)
137 2qq6_A Mandelate racemase/muco 97.3 0.0014 4.9E-08 61.7 10.7 102 18-141 184-290 (410)
138 3w01_A Heptaprenylglyceryl pho 97.3 0.00036 1.2E-08 61.4 6.0 52 100-152 173-224 (235)
139 2og9_A Mandelate racemase/muco 97.3 0.0017 5.8E-08 60.9 11.1 97 24-142 189-288 (393)
140 1tkk_A Similar to chloromucona 97.2 0.0025 8.5E-08 59.0 11.9 105 24-150 167-276 (366)
141 1i4n_A Indole-3-glycerol phosp 97.2 0.0032 1.1E-07 55.9 11.7 103 24-151 135-239 (251)
142 1ub3_A Aldolase protein; schif 97.2 0.0024 8.3E-08 55.5 10.4 115 17-147 94-212 (220)
143 4e5t_A Mandelate racemase / mu 97.2 0.0016 5.4E-08 61.5 9.9 97 24-142 190-289 (404)
144 3nav_A Tryptophan synthase alp 97.2 0.0013 4.6E-08 59.0 8.8 44 102-146 198-241 (271)
145 1wa3_A 2-keto-3-deoxy-6-phosph 97.1 0.00043 1.5E-08 58.7 5.1 65 69-150 121-185 (205)
146 4dwd_A Mandelate racemase/muco 97.1 0.0043 1.5E-07 58.3 12.3 99 22-142 171-271 (393)
147 4af0_A Inosine-5'-monophosphat 97.1 0.0027 9.2E-08 61.9 10.9 70 67-145 338-416 (556)
148 2v82_A 2-dehydro-3-deoxy-6-pho 97.1 0.00048 1.6E-08 58.8 5.0 64 69-148 118-182 (212)
149 2qde_A Mandelate racemase/muco 97.1 0.0041 1.4E-07 58.3 11.8 99 24-144 171-272 (397)
150 3stp_A Galactonate dehydratase 97.1 0.0027 9.2E-08 60.2 10.5 101 24-146 212-315 (412)
151 2ox4_A Putative mandelate race 97.1 0.0017 5.7E-08 61.0 8.9 99 22-142 189-290 (403)
152 1chr_A Chloromuconate cycloiso 97.0 0.0042 1.4E-07 57.8 11.4 97 24-142 170-269 (370)
153 2oz8_A MLL7089 protein; struct 97.0 0.0072 2.5E-07 56.5 13.0 96 24-142 172-273 (389)
154 2pp0_A L-talarate/galactarate 97.0 0.004 1.4E-07 58.5 11.2 97 24-142 202-301 (398)
155 2yw3_A 4-hydroxy-2-oxoglutarat 97.0 0.0011 3.7E-08 57.1 6.5 64 69-147 121-184 (207)
156 1to3_A Putative aldolase YIHT; 97.0 0.0069 2.4E-07 55.1 12.2 96 39-148 154-260 (304)
157 2ps2_A Putative mandelate race 97.0 0.0049 1.7E-07 57.2 11.4 102 24-150 172-277 (371)
158 3sjn_A Mandelate racemase/muco 97.0 0.0033 1.1E-07 58.6 10.1 98 24-142 175-275 (374)
159 3sbf_A Mandelate racemase / mu 97.0 0.0032 1.1E-07 59.3 10.0 103 25-149 184-289 (401)
160 3jva_A Dipeptide epimerase; en 97.0 0.0053 1.8E-07 56.8 11.2 104 24-149 165-271 (354)
161 1h1y_A D-ribulose-5-phosphate 96.9 0.01 3.5E-07 51.3 12.3 106 29-151 103-210 (228)
162 3mqt_A Mandelate racemase/muco 96.9 0.0041 1.4E-07 58.5 10.3 97 24-142 182-282 (394)
163 2o56_A Putative mandelate race 96.9 0.0031 1E-07 59.3 9.5 97 23-141 196-295 (407)
164 1tzz_A Hypothetical protein L1 96.9 0.0054 1.8E-07 57.4 11.1 96 24-141 192-294 (392)
165 3ceu_A Thiamine phosphate pyro 96.9 0.0013 4.6E-08 56.3 6.3 52 98-150 128-180 (210)
166 3rr1_A GALD, putative D-galact 96.9 0.0043 1.5E-07 58.6 10.3 100 24-145 160-262 (405)
167 3my9_A Muconate cycloisomerase 96.9 0.0092 3.1E-07 55.6 12.0 100 24-145 173-275 (377)
168 4a29_A Engineered retro-aldol 96.8 0.0063 2.2E-07 54.0 10.0 118 30-151 94-242 (258)
169 3go2_A Putative L-alanine-DL-g 96.8 0.0056 1.9E-07 57.8 10.4 95 25-143 196-293 (409)
170 3r4e_A Mandelate racemase/muco 96.8 0.0023 7.9E-08 60.7 7.6 100 24-145 202-304 (418)
171 1ypf_A GMP reductase; GUAC, pu 96.8 0.0053 1.8E-07 56.5 9.7 108 12-141 67-176 (336)
172 3mkc_A Racemase; metabolic pro 96.8 0.0055 1.9E-07 57.6 9.9 97 24-142 187-287 (394)
173 2gdq_A YITF; mandelate racemas 96.8 0.0055 1.9E-07 57.2 9.9 96 24-141 166-265 (382)
174 2h6r_A Triosephosphate isomera 96.8 0.0034 1.1E-07 54.4 7.7 77 69-150 128-207 (219)
175 3ddm_A Putative mandelate race 96.8 0.008 2.7E-07 56.5 10.8 97 24-142 181-281 (392)
176 3v3w_A Starvation sensing prot 96.7 0.0041 1.4E-07 59.1 8.2 100 25-146 209-311 (424)
177 3bjs_A Mandelate racemase/muco 96.7 0.0077 2.6E-07 57.2 9.9 96 24-141 211-310 (428)
178 3ajx_A 3-hexulose-6-phosphate 96.7 0.0038 1.3E-07 52.8 7.1 71 68-150 123-194 (207)
179 4e4u_A Mandalate racemase/muco 96.7 0.0075 2.5E-07 57.1 9.8 102 24-147 183-287 (412)
180 3khj_A Inosine-5-monophosphate 96.6 0.012 4.1E-07 54.8 11.0 95 24-142 79-173 (361)
181 3tji_A Mandelate racemase/muco 96.6 0.0054 1.8E-07 58.2 8.7 103 25-149 205-310 (422)
182 1geq_A Tryptophan synthase alp 96.6 0.003 1E-07 55.1 6.4 120 24-148 64-226 (248)
183 3tj4_A Mandelate racemase; eno 96.6 0.012 4.1E-07 54.7 10.8 96 24-141 179-277 (372)
184 3ro6_B Putative chloromuconate 96.6 0.0044 1.5E-07 57.4 7.7 102 24-147 166-271 (356)
185 3kts_A Glycerol uptake operon 96.6 0.0016 5.6E-08 55.5 4.3 47 102-149 140-186 (192)
186 3r2g_A Inosine 5'-monophosphat 96.6 0.0041 1.4E-07 58.0 7.3 65 65-142 105-169 (361)
187 1jvn_A Glutamine, bifunctional 96.6 0.0025 8.7E-08 62.6 6.1 78 64-148 285-373 (555)
188 3t6c_A RSPA, putative MAND fam 96.6 0.0091 3.1E-07 57.0 9.8 103 25-149 223-328 (440)
189 3i6e_A Muconate cycloisomerase 96.5 0.025 8.7E-07 52.8 12.3 100 24-145 175-276 (385)
190 3vnd_A TSA, tryptophan synthas 96.5 0.0052 1.8E-07 55.0 7.1 120 24-146 78-239 (267)
191 4fo4_A Inosine 5'-monophosphat 96.5 0.018 6.2E-07 53.7 11.0 98 24-142 80-177 (366)
192 1pii_A N-(5'phosphoribosyl)ant 96.5 0.029 9.8E-07 53.8 12.5 113 24-162 142-255 (452)
193 3ugv_A Enolase; enzyme functio 96.4 0.022 7.7E-07 53.3 11.4 97 24-142 201-300 (390)
194 1qop_A Tryptophan synthase alp 96.4 0.0057 1.9E-07 54.4 7.0 46 101-147 194-239 (268)
195 2cu0_A Inosine-5'-monophosphat 96.4 0.0027 9.3E-08 61.3 5.2 42 105-147 321-362 (486)
196 3vcn_A Mannonate dehydratase; 96.4 0.0085 2.9E-07 56.9 8.4 99 26-146 211-312 (425)
197 3q45_A Mandelate racemase/muco 96.4 0.017 5.7E-07 53.7 10.3 97 24-142 166-265 (368)
198 4e38_A Keto-hydroxyglutarate-a 96.4 0.01 3.4E-07 52.0 8.3 67 69-151 144-210 (232)
199 3dg3_A Muconate cycloisomerase 96.4 0.016 5.6E-07 53.7 10.2 94 27-142 170-266 (367)
200 1sjd_A N-acylamino acid racema 96.4 0.016 5.6E-07 53.5 10.1 93 26-141 167-262 (368)
201 3glc_A Aldolase LSRF; TIM barr 96.4 0.08 2.7E-06 47.9 14.4 90 40-150 171-265 (295)
202 4e4f_A Mannonate dehydratase; 96.3 0.0079 2.7E-07 57.1 7.8 95 26-142 212-309 (426)
203 3toy_A Mandelate racemase/muco 96.3 0.023 7.8E-07 53.1 10.8 96 24-141 195-293 (383)
204 1vc4_A Indole-3-glycerol phosp 96.3 0.022 7.5E-07 50.4 10.1 73 64-150 70-142 (254)
205 3mwc_A Mandelate racemase/muco 96.3 0.023 7.9E-07 53.4 10.7 96 30-148 193-291 (400)
206 1r0m_A N-acylamino acid racema 96.3 0.017 5.9E-07 53.5 9.7 90 29-141 177-268 (375)
207 2hxt_A L-fuconate dehydratase; 96.3 0.016 5.4E-07 55.1 9.5 97 24-141 224-323 (441)
208 1qap_A Quinolinic acid phospho 96.2 0.058 2E-06 48.8 12.5 103 18-151 180-289 (296)
209 3qja_A IGPS, indole-3-glycerol 96.2 0.0062 2.1E-07 54.6 5.8 75 64-151 77-151 (272)
210 1tqx_A D-ribulose-5-phosphate 96.2 0.12 4.2E-06 44.8 13.9 106 28-150 100-209 (227)
211 2zc8_A N-acylamino acid racema 96.2 0.024 8.3E-07 52.3 9.9 90 29-141 170-261 (369)
212 3tcs_A Racemase, putative; PSI 96.1 0.039 1.3E-06 51.7 11.2 96 25-142 182-280 (388)
213 1ujp_A Tryptophan synthase alp 96.1 0.0085 2.9E-07 53.6 6.3 45 101-148 191-235 (271)
214 1vhc_A Putative KHG/KDPG aldol 96.1 0.0094 3.2E-07 51.8 6.3 68 68-151 126-194 (224)
215 3dgb_A Muconate cycloisomerase 96.1 0.05 1.7E-06 50.7 11.6 100 25-146 177-279 (382)
216 3ovp_A Ribulose-phosphate 3-ep 96.0 0.037 1.3E-06 48.1 10.0 50 100-150 156-205 (228)
217 3tsm_A IGPS, indole-3-glycerol 96.0 0.022 7.5E-07 51.0 8.6 74 64-150 84-157 (272)
218 2zad_A Muconate cycloisomerase 96.0 0.089 3E-06 48.1 12.9 100 24-145 165-270 (345)
219 2b7n_A Probable nicotinate-nuc 96.0 0.062 2.1E-06 48.0 11.3 95 29-151 169-266 (273)
220 1wbh_A KHG/KDPG aldolase; lyas 95.9 0.007 2.4E-07 52.2 4.9 67 69-151 126-193 (214)
221 3r0u_A Enzyme of enolase super 95.9 0.08 2.7E-06 49.3 12.4 99 24-144 168-271 (379)
222 2uva_G Fatty acid synthase bet 95.9 0.0079 2.7E-07 67.2 6.1 79 68-151 712-804 (2060)
223 4avf_A Inosine-5'-monophosphat 95.9 0.014 4.9E-07 56.4 7.1 63 67-142 236-298 (490)
224 2fli_A Ribulose-phosphate 3-ep 95.8 0.02 6.7E-07 48.7 7.2 38 113-151 170-207 (220)
225 3dip_A Enolase; structural gen 95.8 0.043 1.5E-06 51.7 10.1 97 25-142 196-295 (410)
226 3gd6_A Muconate cycloisomerase 95.8 0.073 2.5E-06 49.7 11.6 104 24-151 168-277 (391)
227 2agk_A 1-(5-phosphoribosyl)-5- 95.8 0.0069 2.4E-07 53.8 4.2 74 64-156 43-121 (260)
228 3fcp_A L-Ala-D/L-Glu epimerase 95.7 0.13 4.4E-06 47.9 12.9 101 25-147 176-279 (381)
229 1n7k_A Deoxyribose-phosphate a 95.7 0.085 2.9E-06 46.2 10.9 105 27-147 117-228 (234)
230 1rpx_A Protein (ribulose-phosp 95.7 0.022 7.6E-07 48.9 7.1 38 113-151 179-216 (230)
231 2ekc_A AQ_1548, tryptophan syn 95.6 0.018 6.1E-07 51.1 6.3 45 102-148 196-240 (262)
232 1tqj_A Ribulose-phosphate 3-ep 95.6 0.018 6.2E-07 50.0 6.3 54 97-151 153-210 (230)
233 2czd_A Orotidine 5'-phosphate 95.6 0.054 1.8E-06 46.0 9.1 72 61-150 121-193 (208)
234 4fxs_A Inosine-5'-monophosphat 95.5 0.018 6.1E-07 55.8 6.4 63 67-142 238-300 (496)
235 1mxs_A KDPG aldolase; 2-keto-3 95.5 0.0065 2.2E-07 52.9 2.9 49 101-151 154-203 (225)
236 1vkf_A Glycerol uptake operon 95.5 0.017 5.8E-07 49.0 5.3 42 107-149 143-184 (188)
237 4dxk_A Mandelate racemase / mu 95.5 0.043 1.5E-06 51.5 8.8 95 25-141 193-290 (400)
238 2a4a_A Deoxyribose-phosphate a 95.4 0.023 8E-07 51.1 6.2 109 17-136 129-248 (281)
239 3nl6_A Thiamine biosynthetic b 95.3 0.037 1.3E-06 54.2 7.9 79 68-151 124-218 (540)
240 1jcn_A Inosine monophosphate d 95.3 0.026 8.9E-07 54.7 6.6 64 67-143 262-325 (514)
241 1vcv_A Probable deoxyribose-ph 95.2 0.18 6.3E-06 43.8 11.1 114 17-137 89-211 (226)
242 3lab_A Putative KDPG (2-keto-3 95.1 0.069 2.4E-06 46.2 8.2 79 41-141 13-91 (217)
243 3jr2_A Hexulose-6-phosphate sy 95.1 0.009 3.1E-07 51.3 2.6 105 26-149 96-201 (218)
244 2jbm_A Nicotinate-nucleotide p 95.1 0.044 1.5E-06 49.7 7.1 66 70-151 215-281 (299)
245 1zfj_A Inosine monophosphate d 95.1 0.024 8.1E-07 54.5 5.6 65 66-143 239-303 (491)
246 1p0k_A Isopentenyl-diphosphate 95.0 0.26 9E-06 45.0 12.3 94 38-142 114-209 (349)
247 1p1x_A Deoxyribose-phosphate a 94.9 0.027 9.4E-07 50.1 5.2 118 17-151 108-229 (260)
248 1x1o_A Nicotinate-nucleotide p 94.9 0.061 2.1E-06 48.5 7.5 104 17-151 166-277 (286)
249 3tha_A Tryptophan synthase alp 94.9 0.032 1.1E-06 49.4 5.6 43 103-147 190-232 (252)
250 1vrd_A Inosine-5'-monophosphat 94.9 0.039 1.3E-06 53.1 6.6 64 66-142 243-306 (494)
251 3bw2_A 2-nitropropane dioxygen 94.9 0.37 1.3E-05 44.4 13.1 102 23-144 45-175 (369)
252 1hg3_A Triosephosphate isomera 94.8 0.19 6.6E-06 43.6 10.2 48 103-150 165-213 (225)
253 1o4u_A Type II quinolic acid p 94.8 0.074 2.5E-06 47.9 7.6 106 18-151 164-277 (285)
254 3usb_A Inosine-5'-monophosphat 94.6 0.054 1.8E-06 52.6 6.7 65 67-144 263-327 (511)
255 4af0_A Inosine-5'-monophosphat 94.5 0.043 1.5E-06 53.5 5.8 66 66-144 287-352 (556)
256 2gjl_A Hypothetical protein PA 94.5 0.42 1.4E-05 43.2 12.2 97 23-144 50-148 (328)
257 4e38_A Keto-hydroxyglutarate-a 94.5 0.42 1.4E-05 41.6 11.5 89 29-142 25-113 (232)
258 1y0e_A Putative N-acetylmannos 94.3 0.23 7.9E-06 42.1 9.4 96 30-142 46-146 (223)
259 1gox_A (S)-2-hydroxy-acid oxid 94.3 0.51 1.8E-05 43.7 12.4 43 98-142 211-253 (370)
260 2c6q_A GMP reductase 2; TIM ba 94.3 0.068 2.3E-06 49.4 6.3 59 71-142 131-189 (351)
261 3iv3_A Tagatose 1,6-diphosphat 94.2 0.63 2.1E-05 42.7 12.5 87 61-149 190-287 (332)
262 3p3b_A Mandelate racemase/muco 94.1 0.13 4.5E-06 47.9 8.1 95 24-141 183-284 (392)
263 3igs_A N-acetylmannosamine-6-p 94.0 0.67 2.3E-05 40.1 12.0 101 27-151 6-117 (232)
264 3fv9_G Mandelate racemase/muco 94.0 0.36 1.2E-05 45.0 10.8 47 100-147 231-278 (386)
265 3bo9_A Putative nitroalkan dio 94.0 0.74 2.5E-05 41.8 12.7 93 23-143 60-153 (326)
266 1w0m_A TIM, triosephosphate is 94.0 0.13 4.4E-06 44.8 7.2 46 105-150 164-210 (226)
267 4eiv_A Deoxyribose-phosphate a 94.0 0.14 4.9E-06 46.1 7.5 106 17-133 123-252 (297)
268 1qpo_A Quinolinate acid phosph 93.9 0.081 2.8E-06 47.6 6.0 106 19-151 167-278 (284)
269 1eep_A Inosine 5'-monophosphat 93.9 0.095 3.2E-06 49.1 6.7 63 67-142 160-222 (404)
270 4dye_A Isomerase; enolase fami 93.9 0.45 1.5E-05 44.5 11.3 99 24-146 195-295 (398)
271 1o60_A 2-dehydro-3-deoxyphosph 93.9 0.46 1.6E-05 42.8 10.8 112 17-145 114-242 (292)
272 2p10_A MLL9387 protein; putati 93.5 0.086 2.9E-06 47.3 5.2 80 68-149 179-266 (286)
273 1yxy_A Putative N-acetylmannos 93.4 0.53 1.8E-05 40.2 10.1 94 30-139 59-157 (234)
274 3paj_A Nicotinate-nucleotide p 93.4 0.87 3E-05 41.5 11.9 102 19-151 204-312 (320)
275 3ih1_A Methylisocitrate lyase; 93.0 0.31 1.1E-05 44.2 8.4 105 22-146 140-247 (305)
276 3inp_A D-ribulose-phosphate 3- 93.0 0.33 1.1E-05 42.6 8.3 49 101-150 179-231 (246)
277 3ctl_A D-allulose-6-phosphate 93.0 0.31 1.1E-05 42.3 7.9 105 28-150 95-204 (231)
278 3tqv_A Nicotinate-nucleotide p 93.0 0.74 2.5E-05 41.4 10.6 102 19-151 171-279 (287)
279 3gnn_A Nicotinate-nucleotide p 92.9 0.65 2.2E-05 41.9 10.2 63 70-151 227-290 (298)
280 2uv8_G Fatty acid synthase sub 92.9 0.068 2.3E-06 59.7 4.4 47 104-151 754-811 (2051)
281 3lab_A Putative KDPG (2-keto-3 92.9 0.15 5.3E-06 44.0 5.8 67 69-151 129-195 (217)
282 3ffs_A Inosine-5-monophosphate 92.8 0.15 5.1E-06 48.1 6.1 63 66-142 150-212 (400)
283 3q58_A N-acetylmannosamine-6-p 92.6 1.5 5.2E-05 37.8 11.9 102 26-151 5-117 (229)
284 3vkj_A Isopentenyl-diphosphate 92.6 0.65 2.2E-05 43.1 10.0 108 21-141 100-217 (368)
285 3ik4_A Mandelate racemase/muco 92.3 1.5 5E-05 40.4 12.1 45 97-142 225-270 (365)
286 4hnl_A Mandelate racemase/muco 92.2 0.41 1.4E-05 45.0 8.4 95 25-141 204-301 (421)
287 1vs1_A 3-deoxy-7-phosphoheptul 92.2 3.7 0.00013 36.5 14.1 111 17-145 127-245 (276)
288 4e8g_A Enolase, mandelate race 92.2 0.95 3.3E-05 42.2 10.7 46 100-146 246-292 (391)
289 3eoo_A Methylisocitrate lyase; 92.1 1.4 4.9E-05 39.7 11.3 56 23-82 66-121 (298)
290 3ih1_A Methylisocitrate lyase; 92.0 1.8 6.1E-05 39.2 11.9 114 22-141 71-194 (305)
291 2z6i_A Trans-2-enoyl-ACP reduc 92.0 1.2 4.3E-05 40.2 11.0 93 23-143 46-139 (332)
292 3cu2_A Ribulose-5-phosphate 3- 91.8 0.15 5.1E-06 44.6 4.4 35 113-148 187-223 (237)
293 1wa3_A 2-keto-3-deoxy-6-phosph 91.8 0.43 1.5E-05 39.8 7.2 81 41-144 10-91 (205)
294 2qkf_A 3-deoxy-D-manno-octulos 91.6 0.87 3E-05 40.7 9.4 112 17-145 111-239 (280)
295 3ve9_A Orotidine-5'-phosphate 91.5 0.25 8.6E-06 42.5 5.5 70 62-151 118-189 (215)
296 3sr7_A Isopentenyl-diphosphate 91.5 0.67 2.3E-05 43.0 8.7 73 65-142 161-237 (365)
297 4a35_A Mitochondrial enolase s 91.5 1.3 4.4E-05 42.0 10.9 44 98-141 282-328 (441)
298 3sz8_A 2-dehydro-3-deoxyphosph 91.3 1.8 6.1E-05 38.8 11.0 111 17-144 116-243 (285)
299 3l0g_A Nicotinate-nucleotide p 91.2 1.8 6.3E-05 39.0 11.0 102 19-151 180-288 (300)
300 3c2e_A Nicotinate-nucleotide p 91.1 0.067 2.3E-06 48.3 1.5 39 112-151 248-286 (294)
301 3sgz_A Hydroxyacid oxidase 2; 91.1 1.9 6.4E-05 39.8 11.3 43 97-141 202-244 (352)
302 4adt_A Pyridoxine biosynthetic 91.0 0.55 1.9E-05 42.4 7.4 68 64-139 33-104 (297)
303 1q6o_A Humps, 3-keto-L-gulonat 90.6 0.1 3.5E-06 44.4 2.1 37 113-150 163-199 (216)
304 1kbi_A Cytochrome B2, L-LCR; f 90.5 2.2 7.6E-05 41.2 11.7 42 98-141 329-370 (511)
305 3eoo_A Methylisocitrate lyase; 90.5 0.71 2.4E-05 41.7 7.7 107 20-146 133-243 (298)
306 3zen_D Fatty acid synthase; tr 90.2 0.2 6.9E-06 58.1 4.5 42 109-150 602-654 (3089)
307 1oy0_A Ketopantoate hydroxymet 90.1 3.1 0.00011 37.1 11.4 60 21-81 75-135 (281)
308 1vr6_A Phospho-2-dehydro-3-deo 90.1 3.2 0.00011 38.2 11.9 110 17-145 195-313 (350)
309 1zco_A 2-dehydro-3-deoxyphosph 89.9 3 0.0001 36.7 11.1 112 17-145 112-230 (262)
310 1vhc_A Putative KHG/KDPG aldol 89.8 4.3 0.00015 34.8 11.8 87 31-142 10-96 (224)
311 3exr_A RMPD (hexulose-6-phosph 89.7 0.26 8.8E-06 42.4 3.9 73 69-150 131-204 (221)
312 1p4c_A L(+)-mandelate dehydrog 89.2 0.53 1.8E-05 43.8 6.0 44 97-142 210-253 (380)
313 2ze3_A DFA0005; organic waste 89.1 3.1 0.00011 36.9 10.7 58 22-82 58-115 (275)
314 2v82_A 2-dehydro-3-deoxy-6-pho 89.1 2.5 8.7E-05 35.2 9.7 82 40-143 6-88 (212)
315 1me8_A Inosine-5'-monophosphat 89.0 0.23 7.9E-06 47.9 3.5 65 67-144 249-314 (503)
316 2chr_A Chloromuconate cycloiso 88.9 5.9 0.0002 36.1 12.9 44 96-140 223-267 (370)
317 3nvt_A 3-deoxy-D-arabino-heptu 88.4 4 0.00014 38.0 11.3 110 17-143 231-347 (385)
318 1wuf_A Hypothetical protein LI 88.4 3.1 0.00011 38.5 10.6 44 97-141 237-281 (393)
319 1xg4_A Probable methylisocitra 88.3 6.5 0.00022 35.2 12.3 58 22-82 60-117 (295)
320 1mxs_A KDPG aldolase; 2-keto-3 88.1 5.4 0.00019 34.2 11.3 91 27-142 15-105 (225)
321 4hpn_A Putative uncharacterize 88.1 2.7 9.4E-05 38.5 10.0 43 96-139 223-266 (378)
322 3vnd_A TSA, tryptophan synthas 87.7 1.3 4.4E-05 39.3 7.2 112 27-148 4-136 (267)
323 2nli_A Lactate oxidase; flavoe 87.7 2.4 8.3E-05 39.1 9.4 42 98-141 215-256 (368)
324 3fs2_A 2-dehydro-3-deoxyphosph 86.9 3 0.0001 37.6 9.2 110 17-145 137-263 (298)
325 3nav_A Tryptophan synthase alp 86.8 1.9 6.5E-05 38.3 7.8 106 27-142 6-132 (271)
326 1wbh_A KHG/KDPG aldolase; lyas 86.8 6.2 0.00021 33.4 10.8 87 31-142 9-95 (214)
327 3vav_A 3-methyl-2-oxobutanoate 86.7 16 0.00056 32.3 13.8 76 22-119 71-148 (275)
328 1o66_A 3-methyl-2-oxobutanoate 86.7 11 0.00037 33.5 12.6 58 21-81 58-117 (275)
329 4dbe_A Orotidine 5'-phosphate 86.5 1.1 3.6E-05 38.7 5.8 68 64-150 127-195 (222)
330 1s2w_A Phosphoenolpyruvate pho 86.4 5.2 0.00018 35.9 10.5 107 23-146 133-242 (295)
331 1zlp_A PSR132, petal death pro 86.4 2.8 9.6E-05 38.1 8.8 101 22-146 152-261 (318)
332 3cpr_A Dihydrodipicolinate syn 86.3 2.2 7.5E-05 38.3 8.0 78 66-150 44-126 (304)
333 3b8i_A PA4872 oxaloacetate dec 86.2 7.3 0.00025 34.8 11.3 114 22-142 64-188 (287)
334 3dz1_A Dihydrodipicolinate syn 86.1 2.5 8.7E-05 38.0 8.4 80 57-145 28-112 (313)
335 1eix_A Orotidine 5'-monophosph 86.1 1.6 5.4E-05 37.9 6.8 37 113-150 182-229 (245)
336 3lye_A Oxaloacetate acetyl hyd 86.0 1.8 6.1E-05 39.2 7.2 102 24-146 141-251 (307)
337 1m3u_A 3-methyl-2-oxobutanoate 85.9 14 0.00048 32.6 12.8 101 20-141 57-180 (264)
338 1s2w_A Phosphoenolpyruvate pho 85.9 9.3 0.00032 34.2 11.9 113 25-141 64-189 (295)
339 4a29_A Engineered retro-aldol 85.7 3.6 0.00012 36.3 8.8 73 65-151 70-142 (258)
340 1zlp_A PSR132, petal death pro 85.6 13 0.00046 33.6 12.9 57 22-82 82-139 (318)
341 3b4u_A Dihydrodipicolinate syn 85.5 2.3 7.8E-05 37.9 7.7 84 57-148 23-111 (294)
342 3s5o_A 4-hydroxy-2-oxoglutarat 85.4 3.1 0.00011 37.3 8.6 77 65-148 41-122 (307)
343 1f6k_A N-acetylneuraminate lya 85.2 3.1 0.00011 37.0 8.4 86 57-150 23-114 (293)
344 3m5v_A DHDPS, dihydrodipicolin 85.1 2 6.9E-05 38.4 7.2 77 66-150 35-118 (301)
345 2pge_A MENC; OSBS, NYSGXRC, PS 85.0 4.4 0.00015 37.2 9.6 44 97-141 244-290 (377)
346 3e96_A Dihydrodipicolinate syn 85.0 4.4 0.00015 36.5 9.4 99 18-133 57-159 (316)
347 2ehh_A DHDPS, dihydrodipicolin 84.8 2.5 8.5E-05 37.7 7.6 78 66-150 28-110 (294)
348 2r91_A 2-keto-3-deoxy-(6-phosp 84.5 2.7 9.1E-05 37.3 7.6 76 66-149 26-105 (286)
349 1xky_A Dihydrodipicolinate syn 84.4 3.3 0.00011 37.0 8.3 86 57-150 32-122 (301)
350 3m47_A Orotidine 5'-phosphate 84.4 7.8 0.00027 33.2 10.3 104 26-150 104-210 (228)
351 2zbt_A Pyridoxal biosynthesis 84.4 2.3 8E-05 37.6 7.2 67 65-139 34-104 (297)
352 3a5f_A Dihydrodipicolinate syn 84.3 2.1 7.3E-05 38.1 6.9 77 66-149 29-110 (291)
353 2ekc_A AQ_1548, tryptophan syn 84.2 2.8 9.7E-05 36.6 7.6 104 28-142 4-129 (262)
354 2yxg_A DHDPS, dihydrodipicolin 84.2 2.5 8.6E-05 37.5 7.3 78 66-150 28-110 (289)
355 2hjp_A Phosphonopyruvate hydro 84.1 21 0.00072 31.8 13.4 58 21-82 56-113 (290)
356 1w3i_A EDA, 2-keto-3-deoxy glu 84.0 2.8 9.7E-05 37.3 7.6 84 57-149 19-106 (293)
357 4aaj_A N-(5'-phosphoribosyl)an 83.9 7.2 0.00025 33.5 9.9 64 68-146 142-206 (228)
358 2wkj_A N-acetylneuraminate lya 83.9 3.6 0.00012 36.8 8.3 86 57-150 31-121 (303)
359 2qiw_A PEP phosphonomutase; st 83.8 4.3 0.00015 35.6 8.5 55 21-81 61-115 (255)
360 3m9y_A Triosephosphate isomera 83.7 0.63 2.2E-05 41.1 3.0 39 113-153 208-247 (254)
361 3tqp_A Enolase; energy metabol 83.6 6.1 0.00021 37.3 10.1 99 23-142 216-337 (428)
362 3flu_A DHDPS, dihydrodipicolin 83.5 3.9 0.00013 36.5 8.3 85 57-150 27-117 (297)
363 3fkr_A L-2-keto-3-deoxyarabona 83.3 3.8 0.00013 36.8 8.2 82 57-146 28-114 (309)
364 3b8i_A PA4872 oxaloacetate dec 83.3 9.7 0.00033 34.0 10.7 104 22-145 132-237 (287)
365 1xky_A Dihydrodipicolinate syn 83.3 13 0.00043 33.1 11.6 106 18-139 57-171 (301)
366 2ojp_A DHDPS, dihydrodipicolin 83.2 2.3 7.8E-05 37.9 6.6 78 66-150 29-111 (292)
367 2btm_A TIM, protein (triosepho 83.2 1.1 3.8E-05 39.4 4.4 40 112-153 203-243 (252)
368 1yya_A Triosephosphate isomera 83.2 1.1 3.8E-05 39.4 4.4 39 112-152 203-242 (250)
369 3l21_A DHDPS, dihydrodipicolin 83.1 4.1 0.00014 36.5 8.3 84 57-149 35-124 (304)
370 1jub_A Dihydroorotate dehydrog 83.0 16 0.00054 32.2 12.2 107 26-142 77-192 (311)
371 3noy_A 4-hydroxy-3-methylbut-2 82.9 23 0.00077 32.7 13.1 79 55-152 43-122 (366)
372 2nuw_A 2-keto-3-deoxygluconate 82.8 2.9 9.9E-05 37.1 7.1 76 66-149 27-106 (288)
373 2r8w_A AGR_C_1641P; APC7498, d 82.8 2.3 7.8E-05 38.7 6.5 86 57-150 54-144 (332)
374 1nvm_A HOA, 4-hydroxy-2-oxoval 82.7 7 0.00024 35.5 9.9 82 57-142 29-113 (345)
375 2rfg_A Dihydrodipicolinate syn 82.5 2.1 7.3E-05 38.2 6.2 78 66-150 28-110 (297)
376 3daq_A DHDPS, dihydrodipicolin 82.4 3.5 0.00012 36.7 7.5 78 66-150 30-112 (292)
377 2wqp_A Polysialic acid capsule 82.2 12 0.0004 34.4 11.1 107 17-144 130-236 (349)
378 2hjp_A Phosphonopyruvate hydro 82.1 11 0.00037 33.7 10.6 105 22-146 128-239 (290)
379 2nwr_A 2-dehydro-3-deoxyphosph 82.1 9.3 0.00032 33.7 10.1 109 17-145 100-225 (267)
380 2rfg_A Dihydrodipicolinate syn 82.0 10 0.00035 33.7 10.5 100 18-133 45-152 (297)
381 4dpp_A DHDPS 2, dihydrodipicol 82.0 4.7 0.00016 37.2 8.4 85 57-149 79-168 (360)
382 3qze_A DHDPS, dihydrodipicolin 81.8 3.3 0.00011 37.3 7.2 85 57-150 43-133 (314)
383 4h1z_A Enolase Q92ZS5; dehydra 81.7 6.2 0.00021 36.8 9.3 43 97-140 268-311 (412)
384 3fa4_A 2,3-dimethylmalate lyas 81.5 5.3 0.00018 36.0 8.3 103 21-145 131-242 (302)
385 1o5k_A DHDPS, dihydrodipicolin 81.5 4 0.00014 36.6 7.6 78 66-150 40-122 (306)
386 2v9d_A YAGE; dihydrodipicolini 81.5 13 0.00046 33.7 11.3 99 18-132 76-182 (343)
387 3ru6_A Orotidine 5'-phosphate 81.4 3.8 0.00013 36.9 7.4 72 59-151 158-239 (303)
388 1wue_A Mandelate racemase/muco 81.3 8.2 0.00028 35.5 9.9 44 97-141 237-281 (386)
389 4e7p_A Response regulator; DNA 81.3 9.7 0.00033 28.8 9.0 62 67-141 61-122 (150)
390 3l21_A DHDPS, dihydrodipicolin 81.0 13 0.00043 33.2 10.8 106 18-139 60-174 (304)
391 3qfe_A Putative dihydrodipicol 81.0 5.4 0.00019 35.9 8.3 76 65-147 38-118 (318)
392 3tak_A DHDPS, dihydrodipicolin 81.0 3.9 0.00013 36.3 7.3 85 57-150 21-111 (291)
393 2yxg_A DHDPS, dihydrodipicolin 81.0 14 0.00049 32.5 11.0 99 18-132 45-151 (289)
394 1vqt_A Orotidine 5'-phosphate 80.9 8.2 0.00028 32.7 9.0 35 114-150 157-200 (213)
395 2v9d_A YAGE; dihydrodipicolini 80.9 4.2 0.00014 37.2 7.6 86 57-150 51-141 (343)
396 3si9_A DHDPS, dihydrodipicolin 80.8 4.1 0.00014 36.8 7.4 84 57-149 42-131 (315)
397 3d0c_A Dihydrodipicolinate syn 80.6 12 0.0004 33.6 10.4 104 18-139 57-166 (314)
398 2yyu_A Orotidine 5'-phosphate 80.6 2.6 8.8E-05 36.5 5.8 47 104-150 167-223 (246)
399 1i4n_A Indole-3-glycerol phosp 80.4 5.4 0.00019 34.9 7.9 71 64-148 66-136 (251)
400 3b4u_A Dihydrodipicolinate syn 80.4 19 0.00064 31.9 11.6 107 18-139 48-168 (294)
401 2ehh_A DHDPS, dihydrodipicolin 80.3 20 0.0007 31.6 11.8 99 18-132 45-151 (294)
402 2nv1_A Pyridoxal biosynthesis 80.3 6.3 0.00021 35.0 8.5 73 65-146 34-110 (305)
403 1ep3_A Dihydroorotate dehydrog 80.2 10 0.00035 33.2 9.8 104 29-141 86-195 (311)
404 3fxg_A Rhamnonate dehydratase; 80.2 6.8 0.00023 37.3 9.0 96 25-141 199-297 (455)
405 3flu_A DHDPS, dihydrodipicolin 80.1 16 0.00055 32.4 11.1 100 18-133 52-159 (297)
406 1twd_A Copper homeostasis prot 80.0 8.9 0.0003 33.7 9.0 65 67-142 16-93 (256)
407 3qze_A DHDPS, dihydrodipicolin 80.0 17 0.00058 32.6 11.3 106 18-139 68-182 (314)
408 2vc6_A MOSA, dihydrodipicolina 79.9 2.5 8.4E-05 37.7 5.6 77 66-149 28-109 (292)
409 2r8w_A AGR_C_1641P; APC7498, d 79.9 13 0.00045 33.6 10.6 106 18-139 79-193 (332)
410 2vc6_A MOSA, dihydrodipicolina 79.9 18 0.00063 31.9 11.4 100 18-133 45-152 (292)
411 1o66_A 3-methyl-2-oxobutanoate 79.7 5.7 0.0002 35.3 7.8 84 24-141 116-213 (275)
412 3na8_A Putative dihydrodipicol 79.6 4.2 0.00014 36.7 7.1 85 57-150 44-134 (315)
413 3qn3_A Enolase; structural gen 79.5 11 0.00038 35.3 10.2 70 57-142 263-335 (417)
414 3na8_A Putative dihydrodipicol 79.4 19 0.00066 32.2 11.4 106 18-139 69-184 (315)
415 1vli_A Spore coat polysacchari 79.3 17 0.00058 33.8 11.2 102 17-137 140-243 (385)
416 3u9i_A Mandelate racemase/muco 79.3 13 0.00044 34.4 10.5 45 96-141 254-299 (393)
417 3f4w_A Putative hexulose 6 pho 78.9 12 0.00041 30.8 9.4 89 29-142 41-134 (211)
418 3s5s_A Mandelate racemase/muco 78.8 13 0.00043 34.4 10.3 45 96-141 225-270 (389)
419 3qst_A Triosephosphate isomera 78.8 1.6 5.5E-05 38.5 3.9 40 113-155 207-247 (255)
420 3eod_A Protein HNR; response r 78.6 13 0.00045 27.1 8.7 61 67-140 46-106 (130)
421 1o5k_A DHDPS, dihydrodipicolin 78.5 18 0.00062 32.2 11.0 106 18-139 57-172 (306)
422 2ze3_A DFA0005; organic waste 78.4 18 0.00061 32.0 10.7 100 24-145 124-235 (275)
423 3fa4_A 2,3-dimethylmalate lyas 78.4 20 0.00067 32.2 11.0 54 25-82 64-118 (302)
424 3krs_A Triosephosphate isomera 78.2 1.6 5.4E-05 38.9 3.6 39 113-154 226-265 (271)
425 3eul_A Possible nitrate/nitrit 77.9 13 0.00045 28.0 8.8 61 68-141 57-117 (152)
426 1qop_A Tryptophan synthase alp 77.8 5.1 0.00017 35.0 6.9 78 64-146 36-133 (268)
427 2pa6_A Enolase; glycolysis, ly 77.8 13 0.00044 34.7 10.1 68 57-141 269-338 (427)
428 3jr2_A Hexulose-6-phosphate sy 77.7 15 0.0005 30.8 9.6 89 29-142 47-139 (218)
429 1f6k_A N-acetylneuraminate lya 77.6 16 0.00053 32.3 10.2 106 18-139 49-163 (293)
430 3lye_A Oxaloacetate acetyl hyd 77.5 12 0.00042 33.6 9.5 55 24-82 70-126 (307)
431 2wkj_A N-acetylneuraminate lya 77.4 15 0.00052 32.6 10.1 106 18-139 56-171 (303)
432 2hmc_A AGR_L_411P, dihydrodipi 77.1 4.1 0.00014 37.3 6.3 82 57-148 46-131 (344)
433 3d0c_A Dihydrodipicolinate syn 77.0 4.1 0.00014 36.6 6.2 85 57-150 32-121 (314)
434 1w6t_A Enolase; bacterial infe 76.5 13 0.00045 35.0 9.8 43 100-142 308-353 (444)
435 1rd5_A Tryptophan synthase alp 76.4 8.9 0.0003 33.1 8.1 39 102-142 84-125 (262)
436 3tfx_A Orotidine 5'-phosphate 76.4 7 0.00024 34.3 7.4 74 56-150 141-224 (259)
437 3e96_A Dihydrodipicolinate syn 76.3 3.9 0.00013 36.8 5.8 83 57-149 32-120 (316)
438 3tml_A 2-dehydro-3-deoxyphosph 76.3 7.2 0.00025 34.9 7.5 109 17-144 113-244 (288)
439 2p3z_A L-rhamnonate dehydratas 76.1 19 0.00066 33.5 10.7 96 25-141 205-303 (415)
440 1o5x_A TIM, triosephosphate is 76.0 2.4 8.3E-05 37.2 4.2 36 113-150 203-239 (248)
441 2yc6_A Triosephosphate isomera 76.0 2.8 9.7E-05 36.9 4.7 39 113-154 208-247 (257)
442 2ozt_A TLR1174 protein; struct 75.9 26 0.00088 31.4 11.3 44 97-141 200-244 (332)
443 3kht_A Response regulator; PSI 75.8 15 0.0005 27.4 8.4 61 67-140 46-108 (144)
444 1qwg_A PSL synthase;, (2R)-pho 75.8 6.8 0.00023 34.3 7.0 109 13-143 43-170 (251)
445 3a5f_A Dihydrodipicolinate syn 75.8 11 0.00038 33.3 8.7 100 18-133 46-153 (291)
446 1aw2_A Triosephosphate isomera 75.7 1.7 5.8E-05 38.4 3.1 39 113-153 206-245 (256)
447 3cpr_A Dihydrodipicolinate syn 75.4 23 0.0008 31.4 10.8 95 23-133 66-168 (304)
448 3h5d_A DHDPS, dihydrodipicolin 75.4 6.2 0.00021 35.4 6.9 76 67-150 36-118 (311)
449 3s5o_A 4-hydroxy-2-oxoglutarat 75.3 38 0.0013 30.0 12.2 101 18-133 59-168 (307)
450 3hdg_A Uncharacterized protein 75.2 13 0.00046 27.3 7.9 59 68-139 47-105 (137)
451 2v5b_A Triosephosphate isomera 75.1 3.3 0.00011 36.2 4.9 36 113-150 199-235 (244)
452 3si9_A DHDPS, dihydrodipicolin 75.0 30 0.001 30.9 11.4 100 18-133 67-174 (315)
453 3h5d_A DHDPS, dihydrodipicolin 74.7 40 0.0014 30.0 12.2 100 18-133 52-160 (311)
454 3cz5_A Two-component response 74.7 20 0.00067 27.1 8.9 62 67-141 46-107 (153)
455 3qld_A Mandelate racemase/muco 74.6 20 0.0007 32.9 10.4 46 96-142 224-270 (388)
456 3daq_A DHDPS, dihydrodipicolin 74.6 20 0.00069 31.6 10.1 94 24-133 53-154 (292)
457 2ojp_A DHDPS, dihydrodipicolin 74.5 19 0.00066 31.7 9.9 100 18-133 46-153 (292)
458 3cyj_A Mandelate racemase/muco 74.5 23 0.00079 32.1 10.7 44 97-141 225-269 (372)
459 1gvf_A Tagatose-bisphosphate a 74.3 8.4 0.00029 34.4 7.4 71 66-145 162-235 (286)
460 1gte_A Dihydropyrimidine dehyd 74.1 23 0.00079 36.8 11.8 105 30-141 623-734 (1025)
461 4h83_A Mandelate racemase/muco 74.1 17 0.00059 33.3 9.8 39 101-140 250-289 (388)
462 3jte_A Response regulator rece 73.6 25 0.00085 26.0 9.3 58 70-140 47-104 (143)
463 1m3u_A 3-methyl-2-oxobutanoate 73.5 5.6 0.00019 35.1 5.9 54 57-141 160-213 (264)
464 3cnb_A DNA-binding response re 73.4 24 0.00084 25.8 9.4 60 68-140 50-111 (143)
465 3ekg_A Mandelate racemase/muco 73.3 20 0.00069 33.4 10.1 94 25-140 193-291 (404)
466 2yw3_A 4-hydroxy-2-oxoglutarat 73.2 37 0.0013 28.2 10.9 77 42-142 14-90 (207)
467 3eb2_A Putative dihydrodipicol 73.2 27 0.00092 30.9 10.6 100 18-133 49-156 (300)
468 2vxn_A Triosephosphate isomera 73.1 2.7 9.2E-05 36.9 3.7 36 113-150 206-242 (251)
469 2fym_A Enolase; RNA degradosom 73.0 14 0.00048 34.5 9.0 42 100-141 296-340 (431)
470 2bdq_A Copper homeostasis prot 72.8 30 0.001 29.7 10.3 93 24-139 105-204 (224)
471 3g8r_A Probable spore coat pol 72.6 39 0.0013 31.0 11.6 107 4-137 110-220 (350)
472 3iwp_A Copper homeostasis prot 72.5 24 0.00083 31.4 9.9 94 24-139 140-235 (287)
473 2j27_A Triosephosphate isomera 72.5 3 0.0001 36.6 3.9 36 113-150 205-241 (250)
474 3tak_A DHDPS, dihydrodipicolin 72.4 25 0.00085 30.9 10.1 100 24-139 52-160 (291)
475 3m5v_A DHDPS, dihydrodipicolin 72.4 43 0.0015 29.6 11.7 100 18-133 52-160 (301)
476 3crn_A Response regulator rece 72.3 26 0.00089 25.6 9.1 60 68-140 43-102 (132)
477 3fkr_A L-2-keto-3-deoxyarabona 72.3 42 0.0014 29.8 11.7 102 18-133 53-162 (309)
478 1nsj_A PRAI, phosphoribosyl an 72.2 2.4 8.1E-05 36.0 3.1 70 71-150 118-188 (205)
479 3uj2_A Enolase 1; enzyme funct 72.2 35 0.0012 32.3 11.5 100 26-142 241-363 (449)
480 3fok_A Uncharacterized protein 72.1 13 0.00045 33.5 8.1 43 104-147 229-278 (307)
481 3b2n_A Uncharacterized protein 71.8 24 0.00082 25.9 8.6 59 69-140 46-104 (133)
482 2ptz_A Enolase; lyase, glycoly 71.7 35 0.0012 31.9 11.4 69 56-141 273-345 (432)
483 1pii_A N-(5'phosphoribosyl)ant 71.5 12 0.00042 35.5 8.2 71 64-148 73-143 (452)
484 3eb2_A Putative dihydrodipicol 71.1 2.4 8E-05 38.0 3.0 86 57-150 24-114 (300)
485 2cu0_A Inosine-5'-monophosphat 71.0 2.9 9.9E-05 39.9 3.8 64 66-145 234-297 (486)
486 3hdv_A Response regulator; PSI 71.0 25 0.00084 25.7 8.5 41 101-141 68-109 (136)
487 2qiw_A PEP phosphonomutase; st 70.9 20 0.00069 31.2 8.9 101 25-144 126-238 (255)
488 3f6c_A Positive transcription 70.9 13 0.00043 27.3 6.8 60 69-141 43-102 (134)
489 3rqi_A Response regulator prot 70.8 36 0.0012 26.7 10.6 62 67-141 46-107 (184)
490 1twd_A Copper homeostasis prot 70.5 36 0.0012 29.8 10.3 97 24-142 102-198 (256)
491 2qr3_A Two-component system re 70.5 17 0.00058 26.7 7.5 65 67-141 42-108 (140)
492 3n9r_A Fructose-bisphosphate a 69.7 9.2 0.00031 34.5 6.5 70 57-137 157-229 (307)
493 2nzl_A Hydroxyacid oxidase 1; 69.6 4.7 0.00016 37.6 4.8 41 99-141 239-279 (392)
494 1oy0_A Ketopantoate hydroxymet 69.6 7.8 0.00027 34.5 6.0 54 57-141 178-231 (281)
495 2e6f_A Dihydroorotate dehydrog 69.6 17 0.00057 32.1 8.3 94 39-142 92-195 (314)
496 1yad_A Regulatory protein TENI 69.4 12 0.00041 31.2 7.0 54 69-143 85-138 (221)
497 3tr2_A Orotidine 5'-phosphate 68.8 19 0.00064 31.1 8.2 73 57-150 142-224 (239)
498 1dbw_A Transcriptional regulat 68.8 28 0.00097 25.0 8.4 40 101-140 63-102 (126)
499 3exr_A RMPD (hexulose-6-phosph 68.7 45 0.0015 28.1 10.5 92 30-146 47-145 (221)
500 3th6_A Triosephosphate isomera 68.6 2.8 9.7E-05 36.7 2.9 39 113-154 203-242 (249)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=3.9e-41 Score=316.02 Aligned_cols=228 Identities=29% Similarity=0.548 Sum_probs=188.5
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
||+|||++++.+ ++||++|+++++++.+|++++++++++||++|+|+||++..+.+++.+ +++.++++|+++|+||+|
T Consensus 89 In~gcP~~~~~~-d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~-~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 89 LNLGCPSEKAQE-GGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQ-SVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp EEECCCSHHHHH-TTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHH-HHHHHHHTTCCEEEEECS
T ss_pred ECCcCCCCcCcC-CCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHH-HHHHHHHcCCCEEEEecC
Confidence 799999998885 558999999999999999999999999999999999998655545554 456788999999999999
Q ss_pred CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhh
Q 023442 82 KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIY 161 (282)
Q Consensus 82 t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~ 161 (282)
+... |.++..++.+++..|+.+.++++..+++|||+||||.|++|+.++++ |||+|||||+++.|||+| .++...++
T Consensus 167 ~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~-~~i~~~l~ 243 (350)
T 3b0p_A 167 SALL-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVL-EEADRRVF 243 (350)
T ss_dssp CBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGG-TTHHHHTT
T ss_pred chhc-ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHH-HHHHHHhc
Confidence 8643 43333334456778999999988755899999999999999999998 999999999999999996 77776666
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhccCCCChHHHHHHHHHHhhHHHHHHHHHHHHHhC
Q 023442 162 GAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKTVKSFLEETIVAI 240 (282)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~rk~~~~y~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~ 240 (282)
| +.+++++.++++.+++|++.+++ +|+ .++.+|||+.||++++|+++.||+.+++. .+.+.+.+.++++....
T Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~~~~~kh~~~~~~g~~~~~~~r~~l~~~-~~~~~~~~~l~~~~~~~ 316 (350)
T 3b0p_A 244 G-LPRRPSRLEVARRMRAYLEEEVL-KGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEG-RSLQALDRALRLMEEEV 316 (350)
T ss_dssp C-CSCCCCHHHHHHHHHHHHHHHHH-HTC---CHHHHHTTSTTTTTTSTTHHHHHHHHHHH-CSHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCHHHHHHHHHHHHHHHHH-cCc---cHHHHHHHHHHHHccCCCHHHHHHHHHCC-CCHHHHHHHHHHHhhhc
Confidence 6 44556888999999999988776 575 47899999999999999999999999765 67888888887765444
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.1e-38 Score=295.40 Aligned_cols=219 Identities=20% Similarity=0.331 Sum_probs=180.1
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
||+|||++++.+ ++||++|+++|+++.++++++++++++||+||+|.||+..+.. + +++.++++|+++|+||+|
T Consensus 89 in~gcP~~~~r~-~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~-~----~a~~l~~~G~d~i~v~g~ 162 (318)
T 1vhn_A 89 LNAGCPVRKVVK-EGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE-E----IYRILVEEGVDEVFIHTR 162 (318)
T ss_dssp EEECCCCHHHHH-TTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH-H----HHHHHHHTTCCEEEEESS
T ss_pred EECCCCcHhcCC-CCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH-H----HHHHHHHhCCCEEEEcCC
Confidence 799999998875 5589999999999999999999999999999999999875433 3 355678999999999999
Q ss_pred CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchhhhHhhh
Q 023442 82 KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLGHVDTAI 160 (282)
Q Consensus 82 t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~~~~~~~ 160 (282)
++.. +.++ +..|+.+.++++ ++|||+||||+|++|+.++++ +|||+|||||+++.|||+| ..+...+
T Consensus 163 ~~~~-~~~~-------~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~-~~~~~~~ 230 (318)
T 1vhn_A 163 TVVQ-SFTG-------RAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIF-KQIKDFL 230 (318)
T ss_dssp CTTT-TTSS-------CCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHH-HHHHHHH
T ss_pred Cccc-cCCC-------CcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchH-HHHHHHH
Confidence 8632 2211 123555544433 899999999999999999999 8999999999999999996 6666544
Q ss_pred h-CCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhccCCCChHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 023442 161 Y-GAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKTVKSFLEETIVA 239 (282)
Q Consensus 161 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~rk~~~~y~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~ 239 (282)
. | +.++.++.++++.+.+|++...+++|. ...+..+|||+.||+++++++++||+++++. .+.+++.+++++++.+
T Consensus 231 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~~~~~~ 307 (318)
T 1vhn_A 231 RSG-KYSEPSREEILRTFERHLELLIKTKGE-RKAVVEMRKFLAGYTKDLKGARRFREKVMKI-EEVQILKEMFYNFIKE 307 (318)
T ss_dssp HHS-CCCCCCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHTTHHHHTTTCTTHHHHHHHHTTC-CCHHHHHHHHHHHHHH
T ss_pred hCC-CCCCCCHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHhcCCChHHHHHHHHcC-CCHHHHHHHHHHHHHh
Confidence 4 6 434457788889999999988888986 5588999999999999999999999999654 7788888888887765
Q ss_pred CC
Q 023442 240 IP 241 (282)
Q Consensus 240 ~~ 241 (282)
..
T Consensus 308 ~~ 309 (318)
T 1vhn_A 308 VE 309 (318)
T ss_dssp HC
T ss_pred cc
Confidence 43
No 3
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.89 E-value=1.7e-23 Score=196.27 Aligned_cols=140 Identities=17% Similarity=0.194 Sum_probs=112.5
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCC-CCEEEEe-
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIH- 79 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~G-v~~i~VH- 79 (282)
||+|||+.+ | |.+|+.+|+.+.+++++|++.+++||+||+|.+++. .++.+ ++++++++| +|+|++|
T Consensus 161 lNisCPn~~----g--g~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~----~~~~~-~a~~~~~~Gg~d~I~~~N 229 (354)
T 4ef8_A 161 LNLSCPNVP----G--KPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDF----AHFDA-AAEILNEFPKVQFITCIN 229 (354)
T ss_dssp EECSSCCST----T--SCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSH----HHHHH-HHHHHHTCTTEEEEEECC
T ss_pred EeCCCCCCC----C--chhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCH----HHHHH-HHHHHHhCCCccEEEEec
Confidence 899999852 3 688999999999999999999999999999998853 33433 345677898 9999864
Q ss_pred -----------cCCc------ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 80 -----------SRKA------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 80 -----------~Rt~------~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+|+. .+.|.|+ ..++|..|+.++++++..+++|||+||||+|.+|+.+++..|||+||||
T Consensus 230 T~~~g~~idi~~~~~~~~~~~~~gGlSG---~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 230 SIGNGLVIDAETESVVIKPKQGFGGLGG---RYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp CEEEEECEETTTTEESCSGGGGEEEEEG---GGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred ccCcceeeeccCCccccccccccCCCCC---CCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 3331 1233332 2455677999999988755899999999999999999999999999999
Q ss_pred HHhhhC-Cccchhhh
Q 023442 143 RAAYQN-PWYTLGHV 156 (282)
Q Consensus 143 Rgal~n-P~if~~~~ 156 (282)
|+++.| ||+| .++
T Consensus 307 ra~l~~GP~~~-~~i 320 (354)
T 4ef8_A 307 TALQEEGPSIF-ERL 320 (354)
T ss_dssp HHHHHHCTTHH-HHH
T ss_pred HHHHHhCHHHH-HHH
Confidence 999999 9986 443
No 4
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.88 E-value=2e-22 Score=189.92 Aligned_cols=139 Identities=16% Similarity=0.177 Sum_probs=108.6
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhc-------CCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-------TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR 74 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~-------~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~ 74 (282)
||+|||+.+ |..++++++.+.+++++|+++ +++||+||+|.++++ +++.+ +++.++++|+|
T Consensus 182 lNisCPn~~-------G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~----~~~~~-ia~~~~~aGad 249 (367)
T 3zwt_A 182 VNVSSPNTA-------GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS----QDKED-IASVVKELGID 249 (367)
T ss_dssp EECCCTTST-------TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH----HHHHH-HHHHHHHHTCC
T ss_pred EECCCCCCC-------CccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH----HHHHH-HHHHHHHcCCC
Confidence 899999853 334789999999999999864 689999999998764 23332 46678899999
Q ss_pred EEEEecCCccc------------CCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 75 HFIIHSRKALL------------NGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 75 ~i~VH~Rt~~~------------~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
+|++|+++... .|.++ ..+.|..++.++++++... ++|||+||||.|++|+.++++.|||+||+
T Consensus 250 gi~v~ntt~~r~~~~~~~~~~~~gGlSG---~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 250 GLIVTNTTVSRPAGLQGALRSETGGLSG---KPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp EEEECCCBSCCCTTCCCTTTTSSSEEEE---GGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEEeCCCcccccccccccccccCCcCC---cccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 99999887311 12221 2234556788888887654 79999999999999999999999999999
Q ss_pred cHHh-hhCCccchhhh
Q 023442 142 GRAA-YQNPWYTLGHV 156 (282)
Q Consensus 142 GRga-l~nP~if~~~~ 156 (282)
||++ +.+||+| .++
T Consensus 327 gra~l~~gP~~~-~~i 341 (367)
T 3zwt_A 327 YTALTFWGPPVV-GKV 341 (367)
T ss_dssp SHHHHHHCTHHH-HHH
T ss_pred CHHHHhcCcHHH-HHH
Confidence 9999 5689986 443
No 5
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.86 E-value=2.7e-22 Score=187.48 Aligned_cols=134 Identities=16% Similarity=0.230 Sum_probs=104.3
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEE-----
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF----- 76 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i----- 76 (282)
||+|||+.+ | |++|+++|+.+.+|+++|++.+++||+||+|.++ +..+++ ++++++|++.|
T Consensus 161 lNisCPn~~----G--~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~----~~~~~a----~~~~~aga~~i~~int 226 (345)
T 3oix_A 161 LNLSCPNVP----G--XPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYF----DIVHFD----QAAAIFNXYPLTFVNC 226 (345)
T ss_dssp EECSCCCST----T--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC----CHHHHH----HHHHHHTTSCCSEEEE
T ss_pred EecCCCCcC----C--chhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCC----CHHHHH----HHHHHhCCCceEEEEe
Confidence 799999853 3 6889999999999999999999999999999874 234443 34455555544
Q ss_pred --------EEecCCcc------cCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 77 --------IIHSRKAL------LNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 77 --------~VH~Rt~~------~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
++|.|+.. +.|.|+ ..+.|+.|+.++++++... ++|||+||||.|++|+.++++.|||+|||
T Consensus 227 ~nt~g~~~~i~~~~~~~~~~~~~gGlSG---~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~i 303 (345)
T 3oix_A 227 INSIGNGLVIEDETVVIXPKNGFGGIGG---DYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQI 303 (345)
T ss_dssp CCCEEEEECEETTEESCSGGGGEEEEEE---GGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred ecccccceeeccCccccccccccCCcCC---ccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEE
Confidence 35655422 223322 2344556888988887654 79999999999999999999999999999
Q ss_pred cHH-hhhCCccc
Q 023442 142 GRA-AYQNPWYT 152 (282)
Q Consensus 142 GRg-al~nP~if 152 (282)
||+ ++.+||+|
T Consensus 304 gra~~~~gP~~~ 315 (345)
T 3oix_A 304 GTALHQEGPQIF 315 (345)
T ss_dssp SHHHHHHCTHHH
T ss_pred ChHHHhcChHHH
Confidence 999 89999986
No 6
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.84 E-value=6e-21 Score=181.72 Aligned_cols=136 Identities=14% Similarity=0.130 Sum_probs=101.8
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhc--------------------CCcc-EEEEecCCCCCCCcHHHH
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--------------------TNVP-VSVKCRIGVDDHDSYNQL 60 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~--------------------~~ip-vsvKiR~G~d~~~~~~e~ 60 (282)
||+|||+.+ |..++++++.+.+++++|++. .++| |+||+|.++++. ++
T Consensus 217 iNiScPNt~-------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~----~i 285 (415)
T 3i65_A 217 INVSSPNTP-------GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQE----QK 285 (415)
T ss_dssp EECCCCC---------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHH----HH
T ss_pred EECCCCCCC-------CcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHH----HH
Confidence 899999842 677999999999999999876 2689 999999988652 22
Q ss_pred HHHHHHHHHhCCCCEEEEecCCccc----------CCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHH
Q 023442 61 CDFIYKVSSLSPTRHFIIHSRKALL----------NGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVN 129 (282)
Q Consensus 61 ~~~v~~~le~~Gv~~i~VH~Rt~~~----------~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~ 129 (282)
. .+++.++++|+|.|++|.++... .|.++ ..+.|..++.++++.+... ++|||++|||.|.+|+.
T Consensus 286 ~-~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG---~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~ 361 (415)
T 3i65_A 286 K-EIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG---AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDAL 361 (415)
T ss_dssp H-HHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEE---GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHH
T ss_pred H-HHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCC---ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHH
Confidence 2 24667889999999999887421 12211 1222444677888877643 79999999999999999
Q ss_pred HHHHcCCCEEEecHHhhhC-Cccc
Q 023442 130 AALRKGAHHVMVGRAAYQN-PWYT 152 (282)
Q Consensus 130 ~~l~~g~DgVmIGRgal~n-P~if 152 (282)
+++..|||+|||||+++.+ ||+|
T Consensus 362 e~l~aGAd~VqIgra~l~~GP~~~ 385 (415)
T 3i65_A 362 EKIEAGASVCQLYSCLVFNGMKSA 385 (415)
T ss_dssp HHHHHTEEEEEESHHHHHHGGGHH
T ss_pred HHHHcCCCEEEEcHHHHhcCHHHH
Confidence 9999999999999999887 9986
No 7
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.84 E-value=3.8e-20 Score=172.74 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=111.1
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCC--CCCcHHHHHHHHHHHHHh
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD--DHDSYNQLCDFIYKVSSL 70 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d--~~~~~~e~~~~v~~~le~ 70 (282)
||+|| |... .+++.||++|++|++++.+|+++|++++++||+||++.... ...+.++..+ +++.+++
T Consensus 163 ih~a~GyLl~qFlsp~~N-~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~-la~~L~~ 240 (340)
T 3gr7_A 163 IHAAHGYLINEFLSPLSN-RRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVP-YAKRMKE 240 (340)
T ss_dssp EEECTTCHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHH-HHHHHHH
T ss_pred EccccchHHHHcCCCccC-cCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHH-HHHHHHH
Confidence 68885 8643 34688999999999999999999999999999999997410 0112233333 5677899
Q ss_pred CCCCEEEEec-CCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcC-CCEEEecHHhhhC
Q 023442 71 SPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQN 148 (282)
Q Consensus 71 ~Gv~~i~VH~-Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g-~DgVmIGRgal~n 148 (282)
+|+|+|+||. ++..... ..-+...++.+.++++. .++|||+||+|.|+++++++++.| ||+||+||+++.|
T Consensus 241 ~Gvd~i~vs~g~~~~~~~------~~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lan 313 (340)
T 3gr7_A 241 QGVDLVDVSSGAIVPARM------NVYPGYQVPFAELIRRE-ADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRN 313 (340)
T ss_dssp TTCCEEEEECCCSSCCCC------CCCTTTTHHHHHHHHHH-TTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred cCCCEEEEecCCccCCCC------CCCccccHHHHHHHHHH-cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhC
Confidence 9999999995 3321100 01122347777777765 489999999999999999999955 9999999999999
Q ss_pred CccchhhhHh
Q 023442 149 PWYTLGHVDT 158 (282)
Q Consensus 149 P~if~~~~~~ 158 (282)
|+++ ..+..
T Consensus 314 Pdl~-~ki~~ 322 (340)
T 3gr7_A 314 PYWP-YAAAR 322 (340)
T ss_dssp TTHH-HHHHH
T ss_pred chHH-HHHHH
Confidence 9986 55554
No 8
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.83 E-value=2e-20 Score=171.83 Aligned_cols=140 Identities=18% Similarity=0.194 Sum_probs=108.3
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
||++||+. ++ |..+..+++.+.++++++++.+++||++|++.+++. +++.+ +++.++++|+|+|++|++
T Consensus 126 in~~~P~~----~g--~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~----~~~~~-~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 126 LNLSCPNV----PG--EPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL----VHFDI-MAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp EESCCCCS----SS--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSH----HHHHH-HHHHHTTSCCCEEEECCC
T ss_pred EeccCCCC----CC--cccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH----HHHHH-HHHHHHHcCCcEEEecCC
Confidence 79999984 22 677778999999999999999999999999988743 23333 456788999999999987
Q ss_pred Cc----c--------------cCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 82 KA----L--------------LNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 82 t~----~--------------~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+. . ..|.+ +..+.|..++.++++++... ++|||++|||.|++|+.++++.|||+||+|
T Consensus 195 ~~~g~~i~~~~~~~~~~~~~~~gG~s---g~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 195 IGNGLFIDPEAESVVIKPKDGFGGIG---GAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp EEEEECEETTTTEESCSGGGGEEEEE---SGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCcCceeccCCCCcccccCCCCCccc---cccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 51 0 01111 11122345777888876532 899999999999999999999999999999
Q ss_pred HHhhh-CCccchhhh
Q 023442 143 RAAYQ-NPWYTLGHV 156 (282)
Q Consensus 143 Rgal~-nP~if~~~~ 156 (282)
|+++. +||+| .++
T Consensus 272 ~~~l~~~p~~~-~~i 285 (311)
T 1jub_A 272 TALHKEGPAIF-DRI 285 (311)
T ss_dssp HHHHHHCTHHH-HHH
T ss_pred hHHHhcCcHHH-HHH
Confidence 99996 99986 443
No 9
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.83 E-value=5.2e-20 Score=171.60 Aligned_cols=148 Identities=14% Similarity=0.152 Sum_probs=112.4
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCC-C-CCcHHHHHHHHHHHHHh
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD-D-HDSYNQLCDFIYKVSSL 70 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d-~-~~~~~e~~~~v~~~le~ 70 (282)
||+|| |... .+++.||++|+++++++.+|+++|++++++||+||++.... + ..+.++..+ +++.+++
T Consensus 163 ih~~~gyLl~qFlsp~~n-~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~-~a~~l~~ 240 (338)
T 1z41_A 163 IHAAHGYLIHEFLSPLSN-HRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIG-FAKWMKE 240 (338)
T ss_dssp EEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHH-HHHHHHH
T ss_pred eccccchHHHHccCCCcC-CcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHH-HHHHHHH
Confidence 68887 7632 34678999999999999999999999999999999997311 0 112344443 5677899
Q ss_pred CCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcC-CCEEEecHHhhhCC
Q 023442 71 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNP 149 (282)
Q Consensus 71 ~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g-~DgVmIGRgal~nP 149 (282)
+|+++|+||+++...... + .-+...++.+.++++. .++||++||+|+|+++++++++.| ||+||+||+++.||
T Consensus 241 ~Gvd~i~v~~~~~~~~~~-~----~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nP 314 (338)
T 1z41_A 241 QGVDLIDCSSGALVHADI-N----VFPGYQVSFAEKIREQ-ADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDP 314 (338)
T ss_dssp TTCCEEEEECCCSSCCCC-C----CCTTTTHHHHHHHHHH-HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCT
T ss_pred cCCCEEEEecCccccCCC-C----CCccchHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCc
Confidence 999999999986321100 0 0112346777777665 489999999999999999999955 99999999999999
Q ss_pred ccchhhhHh
Q 023442 150 WYTLGHVDT 158 (282)
Q Consensus 150 ~if~~~~~~ 158 (282)
+++ ..+..
T Consensus 315 dl~-~ki~~ 322 (338)
T 1z41_A 315 FFA-RTAAK 322 (338)
T ss_dssp THH-HHHHH
T ss_pred hHH-HHHHc
Confidence 986 55544
No 10
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.82 E-value=2.1e-20 Score=171.99 Aligned_cols=140 Identities=19% Similarity=0.214 Sum_probs=108.5
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCC-CCEEEEec
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHS 80 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~G-v~~i~VH~ 80 (282)
||++||+. ++ |..+..+++.+.++++++++.+++||+||++.+++. +++.+ +++.++++| +|+|++|+
T Consensus 128 in~~~P~~----~g--~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~----~~~~~-~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 128 LNLSCPNV----PG--KPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDI----AHFDT-AAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp EECCCCCS----TT--CCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCCCH----HHHHH-HHHHHHTCTTEEEEEECC
T ss_pred EEcCCCCC----CC--chhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH----HHHHH-HHHHHHhcCCceEEEEeC
Confidence 79999984 22 567778999999999999999999999999988742 23333 456778999 99999998
Q ss_pred CCcc---c---------------CCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 81 RKAL---L---------------NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 81 Rt~~---~---------------~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++.. . .|.+ ...+.|..++.++++++..+++|||++|||.|++|+.+++..|||+||+|
T Consensus 197 ~~~~~~~i~~~~~~~~~~~~~~~gG~s---g~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 197 SVGNGLVIDAESESVVIKPKQGFGGLG---GKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp CEEEEECEETTTTEESCCGGGGEEEEE---SGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred CCCccccccCCCCCcccccCcCCCccC---cccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 7620 0 0111 11122345778888877645899999999999999999999999999999
Q ss_pred HHhhh-CCccchhhh
Q 023442 143 RAAYQ-NPWYTLGHV 156 (282)
Q Consensus 143 Rgal~-nP~if~~~~ 156 (282)
|+++. +||+| ..+
T Consensus 274 ~~~l~~~p~~~-~~i 287 (314)
T 2e6f_A 274 TALQEEGPGIF-TRL 287 (314)
T ss_dssp HHHHHHCTTHH-HHH
T ss_pred hhhHhcCcHHH-HHH
Confidence 99996 99986 443
No 11
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.82 E-value=4e-20 Score=171.77 Aligned_cols=143 Identities=15% Similarity=0.156 Sum_probs=105.5
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcC---------CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---------NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP 72 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~---------~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~G 72 (282)
||++||+.. |..++++++++.+++++|++.+ ++||+||++.+++. +++.+ +++.++++|
T Consensus 171 in~~sP~~~-------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~----~~~~~-~a~~l~~~G 238 (336)
T 1f76_A 171 INISSPNTP-------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSE----EELIQ-VADSLVRHN 238 (336)
T ss_dssp EECCCSSST-------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCH----HHHHH-HHHHHHHTT
T ss_pred EEccCCCCC-------CcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCH----HHHHH-HHHHHHHcC
Confidence 799999731 3446778999999999999988 89999999987653 23333 466788999
Q ss_pred CCEEEEecCCcccCCCC------cC---CcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 73 TRHFIIHSRKALLNGIS------PA---ENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 73 v~~i~VH~Rt~~~~G~~------~a---d~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+|+|+||+++....... .. ....+.+..++.+.++++... ++|||++|||.|++|+.++++.|||+||+|
T Consensus 239 vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 239 IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred CcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 99999998763111100 00 000111223566667766533 799999999999999999999999999999
Q ss_pred HHhhh-CCccchhhhH
Q 023442 143 RAAYQ-NPWYTLGHVD 157 (282)
Q Consensus 143 Rgal~-nP~if~~~~~ 157 (282)
|+++. |||+| ..+.
T Consensus 319 r~~l~~~P~~~-~~i~ 333 (336)
T 1f76_A 319 SGFIFKGPPLI-KEIV 333 (336)
T ss_dssp HHHHHHCHHHH-HHHH
T ss_pred HHHHhcCcHHH-HHHH
Confidence 99998 99986 5543
No 12
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.81 E-value=3.6e-19 Score=167.61 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=109.6
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCC--CCC----CCcHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG--VDD----HDSYNQLCDFIY 65 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G--~d~----~~~~~e~~~~v~ 65 (282)
||+|| |... .+++.||++++++++++.+|+++|+++++ .||+||++.+ |++ ..+.++..+ ++
T Consensus 180 ih~a~GyLl~qFlsp~~N-~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~-~a 257 (364)
T 1vyr_A 180 LHSAHGYLLHQFLSPSSN-QRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALY-LI 257 (364)
T ss_dssp EEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHH-HH
T ss_pred EcCccchHHHhccCCccc-ccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHH-HH
Confidence 68887 6532 24578999999999999999999999984 3999999986 432 223444443 57
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHH
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRA 144 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRg 144 (282)
+.++++|+++|++|+|+.. .+ ++..++.+.++++. .++|||+||+| |+++++++++ .+||+||+||+
T Consensus 258 ~~l~~~G~d~i~v~~~~~~-~~---------~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~ 325 (364)
T 1vyr_A 258 EELAKRGIAYLHMSETDLA-GG---------KPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRD 325 (364)
T ss_dssp HHHHHTTCSEEEEECCBTT-BC---------CCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHH
T ss_pred HHHHHhCCCEEEEecCccc-CC---------CcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEEEECHH
Confidence 7889999999999997632 11 11236777777665 58999999999 9999999999 55999999999
Q ss_pred hhhCCccchhhhH
Q 023442 145 AYQNPWYTLGHVD 157 (282)
Q Consensus 145 al~nP~if~~~~~ 157 (282)
++.|||++ ..+.
T Consensus 326 ~l~~P~~~-~~~~ 337 (364)
T 1vyr_A 326 YIANPDLV-ARLQ 337 (364)
T ss_dssp HHHCTTHH-HHHH
T ss_pred HHhChhHH-HHHH
Confidence 99999986 5544
No 13
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.80 E-value=3.1e-19 Score=168.73 Aligned_cols=142 Identities=12% Similarity=0.054 Sum_probs=107.7
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCC-CC----CCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-VD----DHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G-~d----~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++|+++++++.+|+++|+++++ .||+||+|.+ +. +..+.++.. .+++
T Consensus 185 Ih~a~GYLl~QFlsp~~N-~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~-~la~ 262 (377)
T 2r14_A 185 VHAANACLPNQFLATGTN-RRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAF-YLAG 262 (377)
T ss_dssp EEECTTCHHHHHHSTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHH-HHHH
T ss_pred EcCcccchHHhccCCccc-cCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHH-HHHH
Confidence 78887 8643 34678999999999999999999999985 3999999974 21 112344444 3577
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
.++++|+++|+||+|+.. ... . . . .|+.+.++++. .++|||+||+| ++++++++++ .+||+||+||++
T Consensus 263 ~le~~Gvd~i~v~~~~~~-~~~--~-~---~--~~~~~~~ik~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~ 331 (377)
T 2r14_A 263 ELDRRGLAYLHFNEPDWI-GGD--I-T---Y--PEGFREQMRQR-FKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPF 331 (377)
T ss_dssp HHHHTTCSEEEEECCC----------C---C--CTTHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHcCCCEEEEeCCccc-CCC--C-c---c--hHHHHHHHHHH-CCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHH
Confidence 889999999999998632 111 0 0 1 25566667665 58999999999 7999999999 559999999999
Q ss_pred hhCCccchhhhH
Q 023442 146 YQNPWYTLGHVD 157 (282)
Q Consensus 146 l~nP~if~~~~~ 157 (282)
+.|||++ ..+.
T Consensus 332 l~~P~l~-~k~~ 342 (377)
T 2r14_A 332 IANPDLP-ERFR 342 (377)
T ss_dssp HHCTTHH-HHHH
T ss_pred HhCchHH-HHHH
Confidence 9999986 5543
No 14
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.80 E-value=3.3e-19 Score=166.55 Aligned_cols=142 Identities=15% Similarity=0.194 Sum_probs=109.2
Q ss_pred ccCCchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecCC-CCCC-CcHHHHHHHHHHHHHhCCCCEEEE-
Q 023442 4 CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDDH-DSYNQLCDFIYKVSSLSPTRHFII- 78 (282)
Q Consensus 4 ~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G-~d~~-~~~~e~~~~v~~~le~~Gv~~i~V- 78 (282)
++||.... +++.||+++++|++++.||+++|++++ ++||+||++.. |.+. .+.++... +++.++++ +|+|++
T Consensus 173 Flsp~~N~-R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~-~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 173 FLSPLSNK-RKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVE-YINMIKDK-VDLIDVS 249 (343)
T ss_dssp HHCTTTCC-CCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHH-HHHHHTTT-CSEEEEE
T ss_pred hhcccccc-cchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHH-HHHHhhcc-ccEEecc
Confidence 78998543 468899999999999999999999999 68999999972 3221 23455554 56788999 999999
Q ss_pred ecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEecHHhhhCCccchhhh
Q 023442 79 HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQNPWYTLGHV 156 (282)
Q Consensus 79 H~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmIGRgal~nP~if~~~~ 156 (282)
|+++..... ...+...++.+.++++. .++|||+||+|+|+++++++++. +||+||+||+++.||+++ ..+
T Consensus 250 ~g~~~~~~~------~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~-~k~ 320 (343)
T 3kru_A 250 SGGLLNVDI------NLYPGYQVKYAETIKKR-CNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWV-LHT 320 (343)
T ss_dssp CCCSSCCCC------CCCTTTTHHHHHHHHHH-HTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH-HHT
T ss_pred CCceEeeee------cccCceeehHHHHHHHh-cCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEE-EEE
Confidence 576532100 00122346777677665 48999999999999999999994 599999999999999986 444
No 15
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.80 E-value=1.4e-19 Score=174.13 Aligned_cols=139 Identities=13% Similarity=0.123 Sum_probs=106.5
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhc-------------------------------------------
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN------------------------------------------- 38 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~------------------------------------------- 38 (282)
||++||+.+ |..++++++.+.+|+++|+++
T Consensus 215 iNiscPnt~-------Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~ 287 (443)
T 1tv5_A 215 INVSSPNTP-------GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDN 287 (443)
T ss_dssp EECCCTTST-------TGGGGGSHHHHHHHHHHHHHHHHHHC--------------------------------------
T ss_pred EeccCCCCc-------ccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhc
Confidence 899999842 678899999999999999864
Q ss_pred -------CCcc-EEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCccc----------CCCCcCCcCCCCCcc
Q 023442 39 -------TNVP-VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALL----------NGISPAENRTIPPLK 100 (282)
Q Consensus 39 -------~~ip-vsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~----------~G~~~ad~~~i~~~~ 100 (282)
.++| |+||++.++++ +++. .+++.++++|+|+|++|+++... .|.++ ..+.|..
T Consensus 288 ~~~~~~~~~~P~V~vKispd~~~----ed~~-~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG---~~~~~~s 359 (443)
T 1tv5_A 288 FLWFNTTKKKPLVFVKLAPDLNQ----EQKK-EIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG---AKLKDIS 359 (443)
T ss_dssp CCCCSSSSSCCEEEEEECSCCCH----HHHH-HHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEE---HHHHHHH
T ss_pred chhcccCCCCCeEEEEeCCCCCH----HHHH-HHHHHHHHcCCCEEEEECCCcccccccccccccCCcCC---CcchHHH
Confidence 3689 99999988764 2333 25667889999999999987521 11111 0111234
Q ss_pred HHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh-CCccchhhh
Q 023442 101 YEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYTLGHV 156 (282)
Q Consensus 101 ~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~-nP~if~~~~ 156 (282)
++.++++++... ++|||++|||.|++|+.++++.|||+||+||+++. +||++ ..+
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~-~~i 416 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSA-VQI 416 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHH-HHH
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHH-HHH
Confidence 667777777542 89999999999999999999999999999999875 99985 443
No 16
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.80 E-value=2.9e-19 Score=170.23 Aligned_cols=149 Identities=15% Similarity=0.088 Sum_probs=110.3
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCC-C----CCCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G-~----d~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++|++|++++.||+++|+++++ .||+||++.+ | +...+.++... +++
T Consensus 190 Ih~ahGYLl~QFLsp~~N-~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~-la~ 267 (402)
T 2hsa_B 190 IHGAHGYLIDQFLKDGIN-DRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLA-VVE 267 (402)
T ss_dssp EECCTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHH-HHH
T ss_pred ECCccchHHHhccCCccC-ccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHH-HHH
Confidence 78887 8733 34678999999999999999999999984 5999999975 2 12223444443 577
Q ss_pred HHHhCC------CCEEEEecCCcccCCCCcCCcCCCC-C-ccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCC
Q 023442 67 VSSLSP------TRHFIIHSRKALLNGISPAENRTIP-P-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 137 (282)
Q Consensus 67 ~le~~G------v~~i~VH~Rt~~~~G~~~ad~~~i~-~-~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~D 137 (282)
.++++| +++|+||+|+.......+. ..++ + ..|+.+.++++. .++|||+||+| |+++++++++ .+||
T Consensus 268 ~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~vk~~-~~iPvi~~G~i-~~~~a~~~l~~g~aD 343 (402)
T 2hsa_B 268 RLNKIQLHSGSKLAYLHVTQPRYVAYGQTEA--GRLGSEEEEARLMRTLRNA-YQGTFICSGGY-TRELGIEAVAQGDAD 343 (402)
T ss_dssp HHHHHHHHHTSCCSEEEEECCCCCTTTTSSS--TTTTHHHHHHHHHHHHHHH-CSSCEEEESSC-CHHHHHHHHHTTSCS
T ss_pred HHHhcCCccCCceEEEEEecCccccccCCcc--ccccCCcchHHHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHCCCCc
Confidence 889999 9999999986321011110 0000 1 135666666665 58999999999 9999999999 5699
Q ss_pred EEEecHHhhhCCccchhhhH
Q 023442 138 HVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 138 gVmIGRgal~nP~if~~~~~ 157 (282)
+||+||+++.|||++ ..+.
T Consensus 344 ~V~igR~~l~dP~l~-~k~~ 362 (402)
T 2hsa_B 344 LVSYGRLFISNPDLV-MRIK 362 (402)
T ss_dssp EEEESHHHHHCTTHH-HHHH
T ss_pred eeeecHHHHhCchHH-HHHH
Confidence 999999999999986 5543
No 17
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.80 E-value=2.3e-19 Score=169.61 Aligned_cols=143 Identities=15% Similarity=0.064 Sum_probs=106.3
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCC-C----CCCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G-~----d~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++++++++++.+|+++|+++++ -||+||++.+ | +...+.++.. .+++
T Consensus 186 ih~a~GyLl~qFlsp~~N-~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~-~la~ 263 (376)
T 1icp_A 186 IHGAHGYLIDQFMKDQVN-DRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGL-YMVE 263 (376)
T ss_dssp EEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHH-HHHH
T ss_pred EcCccchhhhhccCCccc-CCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHH-HHHH
Confidence 68887 6632 24578999999999999999999999985 3999999964 2 2222333433 4577
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
.++++|+++|++|+|+....+.... .|+.+.++++. .++|||+||+| |+++++++++ .+||+||+||++
T Consensus 264 ~le~~Gvd~i~v~~~~~~~~~~~~~--------~~~~~~~vr~~-~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~ 333 (376)
T 1icp_A 264 SLNKYDLAYCHVVEPRMKTAWEKIE--------CTESLVPMRKA-YKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLF 333 (376)
T ss_dssp HHGGGCCSEEEEECCSCCC--------------CCCCSHHHHHH-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHcCCCEEEEcCCcccCCCCccc--------cHHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHH
Confidence 8899999999999986422111001 12334455554 58999999999 9999999999 569999999999
Q ss_pred hhCCccchhhhH
Q 023442 146 YQNPWYTLGHVD 157 (282)
Q Consensus 146 l~nP~if~~~~~ 157 (282)
+.|||++ ..+.
T Consensus 334 l~~P~l~-~k~~ 344 (376)
T 1icp_A 334 ISNPDLP-KRFE 344 (376)
T ss_dssp HHCTTHH-HHHH
T ss_pred HhCccHH-HHHH
Confidence 9999986 5543
No 18
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.79 E-value=1.4e-18 Score=163.59 Aligned_cols=141 Identities=14% Similarity=0.113 Sum_probs=109.1
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCCc-cEEEEecC-CCC----CCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRI-GVD----DHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~i-pvsvKiR~-G~d----~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++|+++++++.+|+++|+++++. ||+||++. +|. +..+.++..+ +++
T Consensus 180 ih~a~gYLl~qFlsp~~N-~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~-~a~ 257 (365)
T 2gou_A 180 LHAANGYLINQFIDSEAN-NRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTA-AAA 257 (365)
T ss_dssp EECCTTSHHHHHHSGGGC-CCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHH-HHH
T ss_pred EecccchhHhhccCCCcc-CcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHH-HHH
Confidence 67887 7632 346789999999999999999999999843 99999997 432 1223444443 577
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEecHHh
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAA 145 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmIGRga 145 (282)
.++++|+++|++|+++. .+. + ...++.+.++++. .++|||+||+| |+++++++++. +||+||+||++
T Consensus 258 ~l~~~G~d~i~v~~~~~--~~~-~-------~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~ 325 (365)
T 2gou_A 258 LLNKHRIVYLHIAEVDW--DDA-P-------DTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPF 325 (365)
T ss_dssp HHHHTTCSEEEEECCBT--TBC-C-------CCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHH
T ss_pred HHHHcCCCEEEEeCCCc--CCC-C-------CccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHH
Confidence 88999999999999763 121 1 1126667777665 58999999999 99999999994 59999999999
Q ss_pred hhCCccchhhhH
Q 023442 146 YQNPWYTLGHVD 157 (282)
Q Consensus 146 l~nP~if~~~~~ 157 (282)
+.|||++ ..+.
T Consensus 326 i~~P~l~-~~~~ 336 (365)
T 2gou_A 326 IANPDLP-ERLR 336 (365)
T ss_dssp HHCTTHH-HHHH
T ss_pred HhCchHH-HHHH
Confidence 9999986 5544
No 19
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.79 E-value=1.3e-18 Score=162.80 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=111.5
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecCC-CCC-CCcHHHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDD-HDSYNQLCDFIYKVS 68 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G-~d~-~~~~~e~~~~v~~~l 68 (282)
||++| |... .+++.||+++++|++++.+|+++|++++ ++||+||++.. |.+ ..+.++... +++.+
T Consensus 171 ih~a~GyLl~qFlsp~~N-~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~-la~~L 248 (349)
T 3hgj_A 171 LHMAHGYLLSSFLSPLSN-QRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLA-FARRL 248 (349)
T ss_dssp EEECTTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHH-HHHHH
T ss_pred ECCccchHHHHhcCCccc-ccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHH-HHHHH
Confidence 79999 8743 3468899999999999999999999999 78999999962 111 112345444 56788
Q ss_pred HhCCCCEEEEe-cCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcC-CCEEEecHHhh
Q 023442 69 SLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAY 146 (282)
Q Consensus 69 e~~Gv~~i~VH-~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g-~DgVmIGRgal 146 (282)
+++|+|+|++| +++...... + .-+...++.+.++++. .++||+++|+|+|+++++++++.| ||+||+||+++
T Consensus 249 ~~~Gvd~i~vs~g~~~~~~~~-~----~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~l 322 (349)
T 3hgj_A 249 KELGVDLLDCSSGGVVLRVRI-P----LAPGFQVPFADAVRKR-VGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLL 322 (349)
T ss_dssp HHTTCCEEEEECCCSCSSSCC-C----CCTTTTHHHHHHHHHH-HCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHH
T ss_pred HHcCCCEEEEecCCcCccccc-C----CCccccHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHH
Confidence 99999999999 443211000 0 0112346667777665 489999999999999999999955 99999999999
Q ss_pred hCCccchhhhHh
Q 023442 147 QNPWYTLGHVDT 158 (282)
Q Consensus 147 ~nP~if~~~~~~ 158 (282)
.||+++ ..+..
T Consensus 323 anPdl~-~k~~~ 333 (349)
T 3hgj_A 323 RDPYFP-LRAAK 333 (349)
T ss_dssp HCTTHH-HHHHH
T ss_pred hCchHH-HHHHH
Confidence 999985 55544
No 20
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.77 E-value=1.2e-18 Score=163.66 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=103.7
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCCc-cEEEEecCC-----CCCCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-----VDDHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~i-pvsvKiR~G-----~d~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++|++|++++.||+++|+++++. ||+||++.. ++..+..++.. .+++
T Consensus 180 ih~a~GYLl~QFLsp~~N-~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~-~la~ 257 (361)
T 3gka_A 180 VHGANGYLLDQFLQDSAN-RRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFG-HVAR 257 (361)
T ss_dssp EECCTTSHHHHHHSTTTC-CCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHH-HHHH
T ss_pred ECCcCccHHHhccCcccc-cccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHH-HHHH
Confidence 78898 8633 346889999999999999999999999843 999999862 11112233433 4677
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
.++++|+|+|+||+++ .|. + .+.++++. .++|||+||+| |+++++++++ .+||+||+||++
T Consensus 258 ~l~~~Gvd~i~v~~~~---~~~---------~----~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ 319 (361)
T 3gka_A 258 ELGRRRIAFLFARESF---GGD---------A----IGQQLKAA-FGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLF 319 (361)
T ss_dssp HHHHTTCSEEEEECCC---STT---------C----CHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHcCCCEEEECCCC---CCH---------H----HHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHh
Confidence 8899999999999876 121 1 12344443 47899999999 9999999999 559999999999
Q ss_pred hhCCccchhhhH
Q 023442 146 YQNPWYTLGHVD 157 (282)
Q Consensus 146 l~nP~if~~~~~ 157 (282)
+.|||++ ..+.
T Consensus 320 ladPdl~-~k~~ 330 (361)
T 3gka_A 320 IANPDLP-RRFK 330 (361)
T ss_dssp HHCTTHH-HHHH
T ss_pred HhCcHHH-HHHH
Confidence 9999986 5544
No 21
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.77 E-value=1.1e-18 Score=183.27 Aligned_cols=140 Identities=19% Similarity=0.295 Sum_probs=104.7
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE---
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--- 78 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--- 78 (282)
||+|||+. +. .++||++++++++++.++++++++.+++||+||++.+.++ +.+ +++.++++|+|+|++
T Consensus 667 in~~~P~~-~~-~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~---~~~----~a~~~~~~G~d~i~v~Nt 737 (1025)
T 1gte_A 667 LNLSCPHG-MG-ERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTD---IVS----IARAAKEGGADGVTATNT 737 (1025)
T ss_dssp EECCCBCC-CC------SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC---HHH----HHHHHHHHTCSEEEECCC
T ss_pred EECCCCCC-CC-CCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHH---HHH----HHHHHHHcCCCEEEEecc
Confidence 89999986 44 4457999999999999999999999999999999976542 333 345678999999999
Q ss_pred -------------------ecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEE
Q 023442 79 -------------------HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 139 (282)
Q Consensus 79 -------------------H~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgV 139 (282)
|+|+.. .|.++. .+.|+.++.+.++++..+++|||++|||.|++|+.++++.|||+|
T Consensus 738 ~~~~~~~~~~~~~~~~~~~~gr~~~-gg~sg~---~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v 813 (1025)
T 1gte_A 738 VSGLMGLKADGTPWPAVGAGKRTTY-GGVSGT---AIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVL 813 (1025)
T ss_dssp EEECCCBCTTSCBSSCBTTTTBBCC-EEEESG---GGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred ccccccccccccccccccccccccC-CCCCcc---cchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEE
Confidence 444321 121111 112223567888877655899999999999999999999999999
Q ss_pred EecHHhhhCCccchh
Q 023442 140 MVGRAAYQNPWYTLG 154 (282)
Q Consensus 140 mIGRgal~nP~if~~ 154 (282)
||||+++.+|+-+..
T Consensus 814 ~vg~~~l~~~~~~~~ 828 (1025)
T 1gte_A 814 QVCSAVQNQDFTVIQ 828 (1025)
T ss_dssp EESHHHHTSCTTHHH
T ss_pred EEeeccccCCccHHH
Confidence 999999986654333
No 22
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.77 E-value=1.6e-18 Score=162.99 Aligned_cols=135 Identities=16% Similarity=0.084 Sum_probs=103.5
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCCCC-----CCCcHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVD-----DHDSYNQLCDFIYK 66 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G~d-----~~~~~~e~~~~v~~ 66 (282)
||+|| |... .+++.||++|++|++++.||+++|+++++ -||+||++..-. ..+..++.. .+++
T Consensus 172 ih~a~GYLl~QFLSp~~N-~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~-~la~ 249 (362)
T 4ab4_A 172 IHGANGYLLDQFLQSSTN-QRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFT-YVAR 249 (362)
T ss_dssp EECCTTSHHHHHHSTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHH-HHHH
T ss_pred ECCcCccHHHhhcCCccc-cccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHH-HHHH
Confidence 78898 8632 34688999999999999999999999984 399999996311 111233333 4677
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
.++++|+|+|+||+++ .|. + .+.++++. .++|||+||+| |+++++++++ .+||+||+||++
T Consensus 250 ~l~~~Gvd~i~v~~~~---~~~---------~----~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~ 311 (362)
T 4ab4_A 250 ELGKRGIAFICSRERE---ADD---------S----IGPLIKEA-FGGPYIVNERF-DKASANAALASGKADAVAFGVPF 311 (362)
T ss_dssp HHHHTTCSEEEEECCC---CTT---------C----CHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHhCCCEEEECCCC---CCH---------H----HHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHh
Confidence 8899999999999876 121 1 12344443 47899999999 9999999999 559999999999
Q ss_pred hhCCccchhhhH
Q 023442 146 YQNPWYTLGHVD 157 (282)
Q Consensus 146 l~nP~if~~~~~ 157 (282)
+.|||++ ..+.
T Consensus 312 lanPdl~-~k~~ 322 (362)
T 4ab4_A 312 IANPDLP-ARLA 322 (362)
T ss_dssp HHCTTHH-HHHH
T ss_pred HhCcHHH-HHHH
Confidence 9999986 5443
No 23
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.76 E-value=9.9e-19 Score=167.33 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=107.6
Q ss_pred ccccC---------CchhhcccCcccccc-cCCHHHHHHHHHHHhhcC------CccEEEEecC--------CCCCCCcH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT------NVPVSVKCRI--------GVDDHDSY 57 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~L-l~~p~~~~eiv~~v~~~~------~ipvsvKiR~--------G~d~~~~~ 57 (282)
||+|| |... .+++.||+++ ++|++++.||+++|++++ ++||++|++. ||+ .
T Consensus 189 IH~ahGYLl~QFlSp~~N-~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~----~ 263 (419)
T 3l5a_A 189 ISIAQRLLIQTFFSTFSN-RRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYT----I 263 (419)
T ss_dssp EECCTTSHHHHHHCTTTC-CCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEEC----H
T ss_pred ECCccchHHHHccCCccc-ccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCC----H
Confidence 78888 8642 3568899999 999999999999999987 6899999986 332 3
Q ss_pred HHHHHHHHHHHHh-CCCCEEEEecCCcccC-CCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHc
Q 023442 58 NQLCDFIYKVSSL-SPTRHFIIHSRKALLN-GISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRK 134 (282)
Q Consensus 58 ~e~~~~v~~~le~-~Gv~~i~VH~Rt~~~~-G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~ 134 (282)
++... +++.+++ +|+|+|+||+++.... ...+... +...++.+..+++... ++|||+||+|+|+++++++++.
T Consensus 264 ed~~~-la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g---~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~ 339 (419)
T 3l5a_A 264 DEFNQ-LIDWVMDVSNIQYLAIASWGRHIYQNTSRTPG---DHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH 339 (419)
T ss_dssp HHHHH-HHHHHHHHSCCCCEEECCTTCCGGGCBCCCSS---TTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG
T ss_pred HHHHH-HHHHHHhhcCCcEEEEeeCCccccccccCCCC---ccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh
Confidence 45444 4667888 9999999998864100 0000000 1112344455554433 6999999999999999999999
Q ss_pred CCCEEEecHHhhhCCccchhhhH
Q 023442 135 GAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 135 g~DgVmIGRgal~nP~if~~~~~ 157 (282)
||+||+||+++.||+++ ..+.
T Consensus 340 -aDlVaiGR~~IanPdlv-~ki~ 360 (419)
T 3l5a_A 340 -ADMVGMSSPFVTEPDFV-HKLA 360 (419)
T ss_dssp -CSEEEESTHHHHCTTHH-HHHH
T ss_pred -CCcHHHHHHHHHCcHHH-HHHH
Confidence 99999999999999986 5544
No 24
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.75 E-value=5.5e-18 Score=154.97 Aligned_cols=135 Identities=23% Similarity=0.378 Sum_probs=102.6
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE---
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--- 78 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--- 78 (282)
||++||+. +++ |..+..+++++.++++++++.+++||.+|++.++.+ ..++ ++.++++|+|.|++
T Consensus 131 i~~~~p~~---~~g--~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~---~~~~----a~~l~~~G~d~i~v~~~ 198 (311)
T 1ep3_A 131 LNISCPNV---KHG--GQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTD---IVPI----AKAVEAAGADGLTMINT 198 (311)
T ss_dssp EECCSEEG---GGT--TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC---SHHH----HHHHHHTTCSEEEECCC
T ss_pred EeCCCCCC---CCc--hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHH---HHHH----HHHHHHcCCCEEEEeCC
Confidence 69999983 222 567778999999999999999999999999987753 2332 44678999999999
Q ss_pred ------ecCCcc------cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 79 ------HSRKAL------LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 79 ------H~Rt~~------~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
|.|+.. ..|.++. ...+..++.+.++++. .++|||++|||.|++|+.++++.|||+||+||+++
T Consensus 199 ~~g~~i~~~~~~~~~~~~~~g~~g~---~~~~~~~~~i~~i~~~-~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l 274 (311)
T 1ep3_A 199 LMGVRFDLKTRQPILANITGGLSGP---AIKPVALKLIHQVAQD-VDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANF 274 (311)
T ss_dssp EEECCBCTTTCSBSSTTSCEEEESG---GGHHHHHHHHHHHHTT-CSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHH
T ss_pred CcccccCcccCCccccCCCCcccCc---cchHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 554421 0111110 1111234667777664 58999999999999999999998999999999999
Q ss_pred hCCccc
Q 023442 147 QNPWYT 152 (282)
Q Consensus 147 ~nP~if 152 (282)
.+|+++
T Consensus 275 ~~p~~~ 280 (311)
T 1ep3_A 275 ADPFVC 280 (311)
T ss_dssp HCTTHH
T ss_pred cCcHHH
Confidence 999985
No 25
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.75 E-value=9.4e-18 Score=157.80 Aligned_cols=145 Identities=16% Similarity=0.186 Sum_probs=107.6
Q ss_pred CCchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecCC-CCCC--CcHHHHHHHHHHHHHhCCCCEEEEec
Q 023442 6 CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDDH--DSYNQLCDFIYKVSSLSPTRHFIIHS 80 (282)
Q Consensus 6 CP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G-~d~~--~~~~e~~~~v~~~le~~Gv~~i~VH~ 80 (282)
||... .+++.||++|+++++++.+|+++|++++ ++||+||++.. +.+. .+.++... +++.++++|+|+|+||.
T Consensus 190 sp~~N-~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~-la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 190 SEHSN-KRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIE-LARRFKAGGLDLLSVSV 267 (363)
T ss_dssp CTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHH-HHHHHHHTTCCEEEEEE
T ss_pred CCCcC-CCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHH-HHHHHHHcCCCEEEEec
Confidence 68642 3578899999999999999999999998 68999999863 1111 12344444 56788999999999997
Q ss_pred CCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcC-CCEEEecHHhhhCCccchhhhHh
Q 023442 81 RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLGHVDT 158 (282)
Q Consensus 81 Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g-~DgVmIGRgal~nP~if~~~~~~ 158 (282)
++.......+ .-+...++.+.++++. .++|||+||+|+|+++++++++.| ||+|++||+++.||+++ ..+..
T Consensus 268 g~~~~~~~~~----~~~~~~~~~~~~ir~~-~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~-~k~~~ 340 (363)
T 3l5l_A 268 GFTIPDTNIP----WGPAFMGPIAERVRRE-AKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWA-YFAAK 340 (363)
T ss_dssp CCCSSCCCCC----CCTTTTHHHHHHHHHH-HTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHH-HHHHH
T ss_pred CccccccccC----CCcchhHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHH-HHHHH
Confidence 5421110000 0012246666666665 489999999999999999999955 99999999999999985 55544
No 26
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.73 E-value=3.7e-17 Score=154.61 Aligned_cols=139 Identities=9% Similarity=-0.042 Sum_probs=105.1
Q ss_pred ccccC---------Cchhhcc-cCcccc-cccCCHHHHHHHHHHHhhcCC-ccEEEEecCC-C----CCCCcHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAG-HGCFGV-SLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDSYNQLCDFI 64 (282)
Q Consensus 2 lN~GC---------P~~~v~~-~g~yGs-~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G-~----d~~~~~~e~~~~v 64 (282)
||+|| |... .+ ++.||+ +++++++++.+|+++|+++++ .||+||++.. + ....+.++... +
T Consensus 194 ih~a~GYLl~QFlsp~~N-~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~-l 271 (379)
T 3aty_A 194 IHGANGYLLDAFFRESSN-KRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKH-L 271 (379)
T ss_dssp EEECTTSHHHHHHSTTTC-CCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHH-H
T ss_pred EcCcCchHHhhccCCCCC-ccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHH-H
Confidence 67776 6521 23 578999 999999999999999999985 4899999972 2 11223444443 5
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGR 143 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGR 143 (282)
++.++++|+++|++|.++.. . + ..+ .+ +.++++ ..++|||+||+| |+++++++++ .+||+||+||
T Consensus 272 a~~l~~~Gvd~i~v~~~~~~--~--~----~~~---~~-~~~ir~-~~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR 337 (379)
T 3aty_A 272 CKKIEPLSLAYLHYLRGDMV--N--Q----QIG---DV-VAWVRG-SYSGVKISNLRY-DFEEADQQIREGKVDAVAFGA 337 (379)
T ss_dssp HHHHGGGCCSEEEEECSCTT--S--C----CCC---CH-HHHHHT-TCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHhCCCEEEEcCCCcC--C--C----Ccc---HH-HHHHHH-HCCCcEEEECCC-CHHHHHHHHHcCCCeEEEecH
Confidence 67889999999999987521 1 1 112 24 556655 458999999999 9999999999 5599999999
Q ss_pred HhhhCCccchhhhH
Q 023442 144 AAYQNPWYTLGHVD 157 (282)
Q Consensus 144 gal~nP~if~~~~~ 157 (282)
+++.||+++ ..+.
T Consensus 338 ~~l~~P~l~-~k~~ 350 (379)
T 3aty_A 338 KFIANPDLV-ERAQ 350 (379)
T ss_dssp HHHHCTTHH-HHHH
T ss_pred HHHhCcHHH-HHHH
Confidence 999999986 5544
No 27
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.70 E-value=3.4e-17 Score=166.37 Aligned_cols=147 Identities=9% Similarity=0.058 Sum_probs=107.8
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecC-------CCCCCCcHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI-------GVDDHDSYNQLCDF 63 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~-------G~d~~~~~~e~~~~ 63 (282)
||+|| |... .+++.||+++++|++++.||+++|++++ ++||++|++. ||+.. ++..+
T Consensus 168 ih~a~gyLl~qFlsp~~N-~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~---~~~~~- 242 (729)
T 1o94_A 168 VYGAHSYLPLQFLNPYYN-KRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAE---VDGQK- 242 (729)
T ss_dssp EEECTTCHHHHHHCTTTC-CCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTT---THHHH-
T ss_pred EccccchHHHHhcCCccC-CCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCch---HHHHH-
Confidence 78999 7532 2467899999999999999999999999 7999999985 44411 23333
Q ss_pred HHHHHHhCCCCEEEEecCCcc-cCCCCcCCcCCCCCc-cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEE
Q 023442 64 IYKVSSLSPTRHFIIHSRKAL-LNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVM 140 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~-~~G~~~ad~~~i~~~-~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVm 140 (282)
+++++++ |+|+|.||.++-. +.+..... ...++. .++.++++++. .++|||+||+|+|+++++++++ .+||+||
T Consensus 243 ~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~ 319 (729)
T 1o94_A 243 FVEMADS-LVDMWDITIGDIAEWGEDAGPS-RFYQQGHTIPWVKLVKQV-SKKPVLGVGRYTDPEKMIEIVTKGYADIIG 319 (729)
T ss_dssp HHHHHGG-GCSEEEEEECCSTTGGGTSCCT-TTCCTTTTHHHHHHHHTT-CSSCEECCSCCCCHHHHHHHHHTTSCSBEE
T ss_pred HHHHHHh-hcCEEEEeeecccccccccCCc-cccCccccHHHHHHHHHH-CCCEEEEeCCCCCHHHHHHHHHCCCCCEEE
Confidence 4567776 7999999987420 01100000 011111 35666666654 6999999999999999999999 5699999
Q ss_pred ecHHhhhCCccchhhhH
Q 023442 141 VGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 141 IGRgal~nP~if~~~~~ 157 (282)
+||+++.|||++ ..+.
T Consensus 320 ~gR~~l~~P~~~-~~~~ 335 (729)
T 1o94_A 320 CARPSIADPFLP-QKVE 335 (729)
T ss_dssp ESHHHHHCTTHH-HHHH
T ss_pred eCchhhcCchHH-HHHH
Confidence 999999999986 4443
No 28
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.70 E-value=6.9e-17 Score=162.43 Aligned_cols=150 Identities=9% Similarity=0.027 Sum_probs=108.9
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecCCC--CCCCcHHHHHHHHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV--DDHDSYNQLCDFIYKVS 68 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~--d~~~~~~e~~~~v~~~l 68 (282)
||+|| |... .+++.||++++++++++.+|+++|++++ ++||++|++... ....+.++..+ +++.+
T Consensus 160 ih~~~gyl~~qFlsp~~n-~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~-~a~~l 237 (671)
T 1ps9_A 160 VMGSEGYLINEFLTLRTN-QRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVE-LAQAI 237 (671)
T ss_dssp EEECBTSHHHHHHCTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHH-HHHHH
T ss_pred EccccchHHHHhCCCccC-CCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHH-HHHHH
Confidence 68887 6532 2468899999999999999999999998 799999999521 11123444444 46778
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCc-cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEecHHhh
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAY 146 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~-~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmIGRgal 146 (282)
+++|+|+|++|+|+..... +......++. .++.++++++ ..++||++||+|+|+++++++++. +||+||+||+++
T Consensus 238 ~~~g~d~i~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~-~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l 314 (671)
T 1ps9_A 238 EAAGATIINTGIGWHEARI--PTIATPVPRGAFSWVTRKLKG-HVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFL 314 (671)
T ss_dssp HHHTCSEEEEEECBTTCSS--CSSSTTSCTTTTHHHHHHHTT-SCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHH
T ss_pred HhcCCCEEEcCCCcccccc--ccccccCCcchHHHHHHHHHH-hcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHH
Confidence 9999999999987532110 1000111222 2455656654 468999999999999999999995 599999999999
Q ss_pred hCCccchhhhH
Q 023442 147 QNPWYTLGHVD 157 (282)
Q Consensus 147 ~nP~if~~~~~ 157 (282)
.||+++ ..+.
T Consensus 315 ~~P~l~-~k~~ 324 (671)
T 1ps9_A 315 ADAELL-SKAQ 324 (671)
T ss_dssp HCTTHH-HHHH
T ss_pred hCcHHH-HHHH
Confidence 999986 4443
No 29
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.69 E-value=4.5e-17 Score=164.36 Aligned_cols=136 Identities=10% Similarity=0.116 Sum_probs=96.8
Q ss_pred ccCcccccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCC----CcHHHHHHHHHHHHHhCCCCEEEEecCCcccC
Q 023442 13 GHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDH----DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLN 86 (282)
Q Consensus 13 ~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~----~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~ 86 (282)
+++.||+++++|++++.||+++|++++ ++||.+|+. .++. -+.++..+ +++.+++ |+|+|.||+++....
T Consensus 195 R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s--~~~~~~~g~~~~~~~~-~~~~l~~-~~d~~~v~~~~~~~~ 270 (690)
T 3k30_A 195 RTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRIT--VEEEIDGGITREDIEG-VLRELGE-LPDLWDFAMGSWEGD 270 (690)
T ss_dssp CCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEE--CCCCSTTSCCHHHHHH-HHHHHTT-SSSEEEEECSCHHHH
T ss_pred CccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEEC--ccccCCCCCCHHHHHH-HHHHHHh-hcCEEEEeccccccc
Confidence 468899999999999999999999998 456666664 2221 12345444 5677777 899999998752100
Q ss_pred CCCcCCcCCCCC-ccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchhhhH
Q 023442 87 GISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 87 G~~~ad~~~i~~-~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~~~~ 157 (282)
.. +.. ..++ ..++.+.++++ ..++|||+||+|+|+++++++++ .+||+||+||+++.|||++ ..+.
T Consensus 271 ~~-~~~--~~~~~~~~~~~~~i~~-~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~-~~~~ 338 (690)
T 3k30_A 271 SV-TSR--FAPEGRQEEFVAGLKK-LTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLP-NKIR 338 (690)
T ss_dssp TC-CTT--TCCTTTTHHHHTTSGG-GCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH-HHHH
T ss_pred CC-CCc--cCCccccHHHHHHHHH-HcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHH-HHHH
Confidence 00 000 0011 12444444444 46899999999999999999999 5699999999999999986 4443
No 30
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.65 E-value=9.9e-17 Score=152.59 Aligned_cols=144 Identities=10% Similarity=0.017 Sum_probs=101.1
Q ss_pred ccccC---------CchhhcccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCCCCC------C-C---cHHHHH
Q 023442 2 PSCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDD------H-D---SYNQLC 61 (282)
Q Consensus 2 lN~GC---------P~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G~d~------~-~---~~~e~~ 61 (282)
||+|| |... .+++.||+++++|++++.+|+++|+++++ .||++|++. |+. . + ..++ .
T Consensus 187 ih~~~GYLl~QFLsp~~N-~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~~~~g~~~~~d~~~~~~~-~ 263 (407)
T 3tjl_A 187 LHAAHGYLLDQFLQPCTN-QRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WATFQNMKAHKDTVHPLTT-F 263 (407)
T ss_dssp EECCTTSHHHHHHSTTTC-CCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCGGGCCGGGSSSCHHHH-H
T ss_pred ECCccchHHHHhcCcccc-ccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-ccccCCCcccccccccHHH-H
Confidence 78999 8532 24578999999999999999999999985 489999886 332 1 1 1222 3
Q ss_pred HHHHHHH---HhCC--CCEEEEe-cCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH--
Q 023442 62 DFIYKVS---SLSP--TRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-- 133 (282)
Q Consensus 62 ~~v~~~l---e~~G--v~~i~VH-~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-- 133 (282)
..+++.+ ++.| +++|+|| +|+... ...+..+ .|..+..+.+ ..++|||+||||++.+|+.++++
T Consensus 264 ~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~-~~~~~~~------~~~~~~~ir~-~~~~PvI~~Ggi~~~~dA~~~i~~~ 335 (407)
T 3tjl_A 264 SYLVHELQQRADKGQGIAYISVVEPRVSGN-VDVSEED------QAGDNEFVSK-IWKGVILKAGNYSYDAPEFKTLKED 335 (407)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECTTEETT-EECCGGG------CCCCSHHHHH-HCCSEEEEESCGGGGTTTTHHHHHH
T ss_pred HHHHHHHHhHhhcCCceeEEEEEccccCCC-CcCCccc------hhHHHHHHHH-HhCCCEEecCCCCCHHHHHHHHHhh
Confidence 3456677 7889 9999999 665321 1111110 0111223333 34789999999999998877775
Q ss_pred --cCCCEEEecHHhhhCCccchhhhH
Q 023442 134 --KGAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~if~~~~~ 157 (282)
.+||+||+||+++.|||++ ..+.
T Consensus 336 ~~g~aDlVa~GR~~iaNPdL~-~ri~ 360 (407)
T 3tjl_A 336 IADKRTLVGFSRYFTSNPNLV-WKLR 360 (407)
T ss_dssp HTTSSEEEECSHHHHHCTTHH-HHHH
T ss_pred ccCCCeEEEeChhhhhCchHH-HHHH
Confidence 4699999999999999986 5443
No 31
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.62 E-value=1.2e-15 Score=142.88 Aligned_cols=137 Identities=17% Similarity=0.203 Sum_probs=91.2
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHh-CCCCEEEE--
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL-SPTRHFII-- 78 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~-~Gv~~i~V-- 78 (282)
||++||+.+ + |..+..+++.+.++++++++.+..|+.+|++.++++. .... .+..+.+ .+++.++.
T Consensus 161 lNiScPn~~----g--~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~-~~~~----~~~~~~~~~~~~~i~~i~ 229 (354)
T 3tjx_A 161 LNLSCPNVP----G--KPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFA-AFDA----AAEILNEFPKVQFITCIN 229 (354)
T ss_dssp EECC---------------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHH-HHHH----HHHHHHTCTTEEEEEECC
T ss_pred eeeCCCCCc----c--hhhhccCHHHHHHHHHHHHHHhhcccccccCCCCCch-hHHH----HHHHHHhhcccchhheec
Confidence 799999742 2 6788999999999999999999999999999988652 1111 1222333 34444332
Q ss_pred --------ecCCc--------ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 79 --------HSRKA--------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 79 --------H~Rt~--------~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+.++. ..+|.|+ ..+.+.....++++.+..+++|||++|||.|.+||.+++..|||+||||
T Consensus 230 t~~~~~~id~~~~~~~~~~~~~~GGlSG---~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~ 306 (354)
T 3tjx_A 230 SIGNGLVIDAETESVVIKPKQGFGGLGG---RYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp CEEEEECEETTTTEESCSGGGGEEEEEG---GGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEEC
T ss_pred ccccccccccccccccccCcccccccCc---hhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEC
Confidence 22221 1122221 1122333455667766667899999999999999999999999999999
Q ss_pred HHh-hhCCccc
Q 023442 143 RAA-YQNPWYT 152 (282)
Q Consensus 143 Rga-l~nP~if 152 (282)
+|+ +.+|++|
T Consensus 307 Ta~~y~GP~~~ 317 (354)
T 3tjx_A 307 TALQEEGPSIF 317 (354)
T ss_dssp HHHHHHCTTHH
T ss_pred hhhhhcCchHH
Confidence 997 5789986
No 32
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.57 E-value=6.8e-15 Score=138.55 Aligned_cols=149 Identities=20% Similarity=0.254 Sum_probs=102.9
Q ss_pred cccc---c--CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEec--CCcccCCCCc
Q 023442 18 GVSL---M--LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISP 90 (282)
Q Consensus 18 Gs~L---l--~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~--Rt~~~~G~~~ 90 (282)
|+.+ + .++++..++++++++.+++||.||. +. +.+ . ++.++++|+|.|+|++ +.+...|
T Consensus 202 g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~---v~---~~e-~----a~~a~~~Gad~I~vs~~ggr~~~~g--- 267 (368)
T 2nli_A 202 GMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKG---IQ---HPE-D----ADMAIKRGASGIWVSNHGARQLYEA--- 267 (368)
T ss_dssp GC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEE---EC---SHH-H----HHHHHHTTCSEEEECCGGGTSCSSC---
T ss_pred CchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEc---CC---CHH-H----HHHHHHcCCCEEEEcCCCcCCCCCC---
Confidence 6665 3 3788888999999999999999994 21 222 2 3456799999999954 3222112
Q ss_pred CCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCccc
Q 023442 91 AENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLT 169 (282)
Q Consensus 91 ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~ 169 (282)
+..|+.+.++++... ++|||++|||.|.+|+.+++..|||+||||| ||++ .... .|+ ..
T Consensus 268 -------~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr-----~~l~-~~~~---~G~----~g 327 (368)
T 2nli_A 268 -------PGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGR-----PVLF-GLAL---GGW----QG 327 (368)
T ss_dssp -------CCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECH-----HHHH-HHHH---HHH----HH
T ss_pred -------CChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECH-----HHHH-HHHh---cCh----HH
Confidence 224777777766533 6999999999999999999999999999999 4453 2211 121 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 023442 170 RRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPL 202 (282)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~rk~~ 202 (282)
..++++.+.++++.....+|. ..+..+++..
T Consensus 328 v~~~l~~l~~el~~~m~~~G~--~~i~~l~~~~ 358 (368)
T 2nli_A 328 AYSVLDYFQKDLTRVMQLTGS--QNVEDLKGLD 358 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC--SSHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCC--cCHHHhcccc
Confidence 245667777777777777886 2566666643
No 33
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.55 E-value=3.1e-14 Score=132.82 Aligned_cols=168 Identities=15% Similarity=0.077 Sum_probs=102.6
Q ss_pred ccccCCchhhcccCcccccccCCHHH--HHHHHHHHhhcCCccEEEEec-CCCCCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKF--VGEAMSVIAANTNVPVSVKCR-IGVDDHDSYNQLCDFIYKVSSLSPTRHFII 78 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~--~~eiv~~v~~~~~ipvsvKiR-~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V 78 (282)
||++||+..+. .. | ++++ +.++++++++.+++||.+|+. .+++ . +. ++.+.++|+|+|++
T Consensus 146 i~~~~~~~~~~--~~-~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~----~-~~----a~~a~~~Gad~I~v 208 (349)
T 1p0k_A 146 IHLNVIQEIVM--PE-G-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS----K-AS----AGKLYEAGAAAVDI 208 (349)
T ss_dssp EEECTTTTC----------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC----H-HH----HHHHHHHTCSEEEE
T ss_pred ecccchhhhcC--CC-C-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC----H-HH----HHHHHHcCCCEEEE
Confidence 79999975332 11 2 4443 778999999989999999984 3332 2 22 34567899999999
Q ss_pred --ecCCccc-----CCCCcCC-cCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 79 --HSRKALL-----NGISPAE-NRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 79 --H~Rt~~~-----~G~~~ad-~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
|++|... ....... .....+..++.+.++.+...++|||++|||.|++|+.+++..|||+|||||+++..+.
T Consensus 209 ~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~ 288 (349)
T 1p0k_A 209 GGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALT 288 (349)
T ss_dssp EC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred cCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 7775210 0000000 0001122367777776654589999999999999999999999999999997765432
Q ss_pred cchhhhHhhhhCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 023442 151 YTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKP 201 (282)
Q Consensus 151 if~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~rk~ 201 (282)
. .|. ....+.++.+.+.++..+..+|. ..+..++++
T Consensus 289 ~---------~g~----~~~~~~~~~~~~~l~~~m~~~G~--~~i~el~~~ 324 (349)
T 1p0k_A 289 D---------SGE----EGLLEEIQLILEELKLIMTVLGA--RTIADLQKA 324 (349)
T ss_dssp H---------HHH----HHHHHHHHHHHHHHHHHHHHHTC--CBHHHHTTC
T ss_pred h---------cCH----HHHHHHHHHHHHHHHHHHHHhCC--CCHHHHhhC
Confidence 1 110 12234556666666666777775 245666654
No 34
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.55 E-value=1.1e-14 Score=128.67 Aligned_cols=133 Identities=14% Similarity=0.268 Sum_probs=99.9
Q ss_pred cccCCchhhcccCcccccccCCHHHHHHHHHHHhhcC----Ccc-----EEEEecCCCCCCC-cHHHHHHHHHHHHHhCC
Q 023442 3 SCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT----NVP-----VSVKCRIGVDDHD-SYNQLCDFIYKVSSLSP 72 (282)
Q Consensus 3 N~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~----~ip-----vsvKiR~G~d~~~-~~~e~~~~v~~~le~~G 72 (282)
..|| ..|. +|+.++.+|+.+.++++.+...+ +.+ .+||+| ||.+.. +..+. ++.+++.|
T Consensus 94 ~~Ga--d~V~----lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~-g~~~~~~~~~e~----~~~~~~~G 162 (244)
T 2y88_A 94 ATGC--ARVN----VGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGR-GWETDGGDLWDV----LERLDSEG 162 (244)
T ss_dssp HTTC--SEEE----ECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEG-GGTEEEEEHHHH----HHHHHHTT
T ss_pred HcCC--CEEE----ECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEEC-CccCCCCCHHHH----HHHHHhCC
Confidence 4565 4455 68889999999999999876432 333 368889 887532 22332 34567899
Q ss_pred CCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc---CCCEEEecHHhhhCC
Q 023442 73 TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK---GAHHVMVGRAAYQNP 149 (282)
Q Consensus 73 v~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~---g~DgVmIGRgal~nP 149 (282)
++.|.+|+|++...+. ...|+.+.++++. .++|||++|||.+++|+.++++. |||+||+||+++.+|
T Consensus 163 ~~~i~~~~~~~~~~~~---------g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~ 232 (244)
T 2y88_A 163 CSRFVVTDITKDGTLG---------GPNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARR 232 (244)
T ss_dssp CCCEEEEETTTTTTTS---------CCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTS
T ss_pred CCEEEEEecCCccccC---------CCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCC
Confidence 9999999988532221 1248888888764 58999999999999999999984 999999999999999
Q ss_pred ccchhhhH
Q 023442 150 WYTLGHVD 157 (282)
Q Consensus 150 ~if~~~~~ 157 (282)
|.| .++.
T Consensus 233 ~~~-~~~~ 239 (244)
T 2y88_A 233 FTL-PQAL 239 (244)
T ss_dssp SCH-HHHH
T ss_pred cCH-HHHH
Confidence 985 5543
No 35
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5.3e-15 Score=133.12 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=95.6
Q ss_pred ccCCchhhcccCcccccccCC-----HHHHHHHHHHHh-hcCCccEEEEec---------CCCCCCC--cHH-HHHHHHH
Q 023442 4 CGCPSPKVAGHGCFGVSLMLD-----PKFVGEAMSVIA-ANTNVPVSVKCR---------IGVDDHD--SYN-QLCDFIY 65 (282)
Q Consensus 4 ~GCP~~~v~~~g~yGs~Ll~~-----p~~~~eiv~~v~-~~~~ipvsvKiR---------~G~d~~~--~~~-e~~~~v~ 65 (282)
.|| .+|+ .||+++++ |+++.++++++. +.+-+++.+|+| .||.+.. +.. ++ +
T Consensus 95 ~Ga--~~Vi----igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~----a 164 (260)
T 2agk_A 95 KWA--SKVI----VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADT----F 164 (260)
T ss_dssp TTC--SCEE----ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHH----H
T ss_pred cCC--CEEE----ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHH----H
Confidence 565 5666 69999999 999999999997 544344444422 2676532 222 33 3
Q ss_pred HHHHhCCCCEEEEecCCcc--cCCCCcCCcCCCCCccHHHHHHHHhcCC---CceEEEccCCCCHHHHHHHHH-c-CCCE
Q 023442 66 KVSSLSPTRHFIIHSRKAL--LNGISPAENRTIPPLKYEYYYALLRDFP---DLTFTLNGGINTVDEVNAALR-K-GAHH 138 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~--~~G~~~ad~~~i~~~~~~~i~~l~~~~~---~ipVi~nGdI~s~eda~~~l~-~-g~Dg 138 (282)
+.+++. ++.|++|++++. ++|. +|+.+.++++..+ ++|||+||||.|++|+.++++ + |||+
T Consensus 165 ~~~~~~-a~~il~t~i~~dG~~~G~-----------d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~g 232 (260)
T 2agk_A 165 RELRKY-TNEFLIHAADVEGLCGGI-----------DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVD 232 (260)
T ss_dssp HHHTTT-CSEEEEEC-------CCC-----------CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEE
T ss_pred HHHHHh-cCEEEEEeeccccCcCCC-----------CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCE
Confidence 456889 999999998753 3332 4899988887533 899999999999999999998 6 9999
Q ss_pred EEecHHh--hhCC-ccchhhh
Q 023442 139 VMVGRAA--YQNP-WYTLGHV 156 (282)
Q Consensus 139 VmIGRga--l~nP-~if~~~~ 156 (282)
||+||++ +.+| |.| .++
T Consensus 233 vivg~al~l~~g~~~~~-~~~ 252 (260)
T 2agk_A 233 LTFGSSLDIFGGNLVKF-EDC 252 (260)
T ss_dssp EECCTTBGGGTCSSBCH-HHH
T ss_pred EEeeCCHHHcCCCCCCH-HHH
Confidence 9999997 9999 985 443
No 36
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1e-14 Score=134.14 Aligned_cols=135 Identities=21% Similarity=0.312 Sum_probs=93.1
Q ss_pred CCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCC-------------------------C------
Q 023442 6 CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD-------------------------H------ 54 (282)
Q Consensus 6 CP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~-------------------------~------ 54 (282)
||+|++.+.++ |+++|++|+.+.+|.+ ++++||+.|+|+||.+ .
T Consensus 45 ~~v~~d~~~~~-G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~Id~s~~l~p~d~~~~i~k~~ 119 (330)
T 2yzr_A 45 ERVPADIRAAG-GVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKK 119 (330)
T ss_dssp SSCHHHHC--C-CCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGG
T ss_pred CCccccccCCc-chhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCEEehhccCCHHHHHHHhhhhh
Confidence 49999999988 9999999999888764 5689999999999831 0
Q ss_pred ---------CcHHHHHHHHHHHHHhCCCCEEEEec--------------CC------------c--ccCC--CCcCCc--
Q 023442 55 ---------DSYNQLCDFIYKVSSLSPTRHFIIHS--------------RK------------A--LLNG--ISPAEN-- 93 (282)
Q Consensus 55 ---------~~~~e~~~~v~~~le~~Gv~~i~VH~--------------Rt------------~--~~~G--~~~ad~-- 93 (282)
.++.|. .+.+ +.|+++|.+|| || . .+.. ...+++
T Consensus 120 ~~~~~~~~a~~lgea----~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~El~~~A~~~gadyv~ 194 (330)
T 2yzr_A 120 FNVPFVCGARNLGEA----VRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDEEVYGVAKFYANRYAE 194 (330)
T ss_dssp CSSCEEEECSSHHHH----HHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGGH
T ss_pred cccchhhccccHHHH----HHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHHHHHHHHHHcCCCEee
Confidence 023332 3334 68999999999 54 0 0000 000111
Q ss_pred -------------CC--CCC------------ccHHHHHHHHhcCCCceE--EEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 94 -------------RT--IPP------------LKYEYYYALLRDFPDLTF--TLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 94 -------------~~--i~~------------~~~~~i~~l~~~~~~ipV--i~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
+. .-+ ..++.+.++.+. .++|| |++|||.|++|+.++++.|||||||||+
T Consensus 195 ~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~-~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsa 273 (330)
T 2yzr_A 195 LAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKL-GRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSG 273 (330)
T ss_dssp HHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHH-TSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHH
T ss_pred cccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHh-CCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHH
Confidence 00 001 112666666654 47898 6999999999999999999999999999
Q ss_pred hh--hCCcc
Q 023442 145 AY--QNPWY 151 (282)
Q Consensus 145 al--~nP~i 151 (282)
++ .||..
T Consensus 274 I~~a~dP~~ 282 (330)
T 2yzr_A 274 IFKSENPLE 282 (330)
T ss_dssp HHTSSCHHH
T ss_pred HhcCCCHHH
Confidence 99 55554
No 37
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.52 E-value=4e-14 Score=134.35 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=93.7
Q ss_pred cccC---CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 20 SLML---DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 20 ~Ll~---~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.++. +|++..++++++++.+++||.+|. +. +.++ ++.+.++|+|+|+|+++...+. ++
T Consensus 229 ~~~~~~~d~~~~~~~i~~lr~~~~~PvivKg---v~---~~e~-----A~~a~~aGad~I~vs~~ggr~~-----~~--- 289 (392)
T 2nzl_A 229 AYVAKAIDPSISWEDIKWLRRLTSLPIVAKG---IL---RGDD-----AREAVKHGLNGILVSNHGARQL-----DG--- 289 (392)
T ss_dssp HHHHHHBCTTCCHHHHHHHC--CCSCEEEEE---EC---CHHH-----HHHHHHTTCCEEEECCGGGTSS-----TT---
T ss_pred HHHhhcCChHHHHHHHHHHHHhhCCCEEEEe---cC---CHHH-----HHHHHHcCCCEEEeCCCCCCcC-----CC---
Confidence 3555 888888999999999999999994 32 2222 3456799999999965332111 11
Q ss_pred CCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHHH
Q 023442 97 PPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVE 175 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~~ 175 (282)
.+..++.+.++++... ++|||++|||.|.+|+.+++..|||+|||||+++.... . .|+ ....++++
T Consensus 290 g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~------~---~g~----~gv~~~l~ 356 (392)
T 2nzl_A 290 VPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLA------F---QGE----KGVQDVLE 356 (392)
T ss_dssp CCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHH------H---HHH----HHHHHHHH
T ss_pred CcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHH------h---cCh----HHHHHHHH
Confidence 1234777777766432 69999999999999999999999999999995543211 1 121 12235566
Q ss_pred HHHHHHHHHHHhcCC
Q 023442 176 KYQIYGDAILGTYGN 190 (282)
Q Consensus 176 ~~~~~~~~~~~~~g~ 190 (282)
.+.+.++......|.
T Consensus 357 ~l~~el~~~m~~~G~ 371 (392)
T 2nzl_A 357 ILKEEFRLAMALSGC 371 (392)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCC
Confidence 666666666667775
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.48 E-value=5.2e-14 Score=137.73 Aligned_cols=145 Identities=18% Similarity=0.215 Sum_probs=98.9
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
.+|.+..++++++++.+++||.||. +.. .+ . ++.++++|+|+|+| |++++...+ +..
T Consensus 326 ~d~~~~~~~i~~lr~~~~~PvivKg---v~~---~e-~----A~~a~~aGad~I~vs~hgG~~~d~~----------~~~ 384 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKTKLPIVIKG---VQR---TE-D----VIKAAEIGVSGVVLSNHGGRQLDFS----------RAP 384 (511)
T ss_dssp BCTTCCHHHHHHHHHHCSSCEEEEE---ECS---HH-H----HHHHHHTTCSEEEECCTTTTSSTTC----------CCH
T ss_pred cChHhHHHHHHHHHHHhCCcEEEEe---CCC---HH-H----HHHHHHcCCCEEEEcCCCCccCCCC----------Cch
Confidence 5788888999999999999999993 322 22 2 34567999999999 555533221 123
Q ss_pred HHHHHHHHhcC------CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHH
Q 023442 101 YEYYYALLRDF------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVV 174 (282)
Q Consensus 101 ~~~i~~l~~~~------~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~ 174 (282)
|+.+.++++.. .++|||++|||.|.+|+.+++..|||+|||||+++ | .... .|+ ....+++
T Consensus 385 ~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l-----~-~~~~---~G~----~gv~~~l 451 (511)
T 1kbi_A 385 IEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFL-----Y-ANSC---YGR----NGVEKAI 451 (511)
T ss_dssp HHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHH-----H-HHHH---HHH----HHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHH-----H-HHHh---cCh----HHHHHHH
Confidence 67666665432 37999999999999999999999999999999554 3 2211 121 1223456
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 023442 175 EKYQIYGDAILGTYGNNRPHVRDVMKPLL 203 (282)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~~~rk~~~ 203 (282)
+.+.+.++......|. ..+..++++++
T Consensus 452 ~~l~~el~~~m~~~G~--~~i~el~~~~l 478 (511)
T 1kbi_A 452 EILRDEIEMSMRLLGV--TSIAELKPDLL 478 (511)
T ss_dssp HHHHHHHHHHHHHHTC--CBGGGCCGGGE
T ss_pred HHHHHHHHHHHHHhCC--CcHHHHhHHHh
Confidence 6666666666677775 24455555543
No 39
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.48 E-value=2.7e-14 Score=133.46 Aligned_cols=149 Identities=15% Similarity=0.221 Sum_probs=107.5
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEec--CCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~--Rt~~~~G~~~ad~~~i~~~~ 100 (282)
-+|.+..+.++.+++.+++||.+|... +.++ ++.+.++|+|.|+|++ +++...+ +..
T Consensus 200 ~d~~~~w~~i~~lr~~~~~PvivK~v~------~~e~-----A~~a~~~GaD~I~vsn~GG~~~d~~----------~~~ 258 (352)
T 3sgz_A 200 PKASFCWNDLSLLQSITRLPIILKGIL------TKED-----AELAMKHNVQGIVVSNHGGRQLDEV----------SAS 258 (352)
T ss_dssp CCTTCCHHHHHHHHHHCCSCEEEEEEC------SHHH-----HHHHHHTTCSEEEECCGGGTSSCSS----------CCH
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEecC------cHHH-----HHHHHHcCCCEEEEeCCCCCccCCC----------ccH
Confidence 467778889999999999999999863 2222 3456799999999954 4332111 234
Q ss_pred HHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHHHHHHH
Q 023442 101 YEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQI 179 (282)
Q Consensus 101 ~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (282)
++.+.++++.. .++|||++|||.|.+|+.+++..|||+|||||+++..+.. .|. ....++++.+.+
T Consensus 259 ~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~---------~G~----~gv~~~l~~l~~ 325 (352)
T 3sgz_A 259 IDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLAC---------KGE----DGVKEVLDILTA 325 (352)
T ss_dssp HHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH---------HHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------cCc----HHHHHHHHHHHH
Confidence 77777776543 3799999999999999999999999999999976533321 121 122356666777
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHhc
Q 023442 180 YGDAILGTYGNNRPHVRDVMKPLLHFFH 207 (282)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~rk~~~~y~~ 207 (282)
.++......|. . .+..+++++.||.+
T Consensus 326 el~~~m~~~G~-~-~i~el~~~~~~y~k 351 (352)
T 3sgz_A 326 ELHRCMTLSGC-Q-SVAEISPDLIQFSR 351 (352)
T ss_dssp HHHHHHHHHTC-S-BGGGCCGGGBSSCC
T ss_pred HHHHHHHHhCC-C-cHHHHhhhcchhcc
Confidence 77777778886 2 46778899888865
No 40
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.48 E-value=2.6e-13 Score=121.79 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=90.9
Q ss_pred CccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEec
Q 023442 1 MPSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS 80 (282)
Q Consensus 1 ~lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~ 80 (282)
|.+.|||...- + .+ |.+-|.+|+.+ ++|++++++||..|.|+|. +.+ +++++++|+|.|.-+-
T Consensus 36 ~~l~~~p~d~r-~-~g-Gv~Rm~dp~~I----~~I~~aVsIPVm~k~righ-----~~E-----Aqilea~GaD~IDese 98 (291)
T 3o07_A 36 MALESIPADMR-K-SG-KVCRMSDPKMI----KDIMNSVSIPVMAKVRIGH-----FVE-----AQIIEALEVDYIDESE 98 (291)
T ss_dssp EECSSCHHHHH-T-TT-CCCCCCCHHHH----HHHHTTCSSCEEEEEETTC-----HHH-----HHHHHHTTCSEEEEET
T ss_pred hhccCCCchhh-h-cC-CccccCCHHHH----HHHHHhCCCCeEEEEecCc-----HHH-----HHHHHHcCCCEEeccc
Confidence 56789998643 3 34 78999999985 5556778999999999985 222 3456677777775331
Q ss_pred C-Cc---------------------------------------------------------------ccCCC-CcCCc--
Q 023442 81 R-KA---------------------------------------------------------------LLNGI-SPAEN-- 93 (282)
Q Consensus 81 R-t~---------------------------------------------------------------~~~G~-~~ad~-- 93 (282)
+ |. .+.|. +..+.
T Consensus 99 vltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~ 178 (291)
T 3o07_A 99 VLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAK 178 (291)
T ss_dssp TSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred CCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhh
Confidence 1 00 00111 10000
Q ss_pred --CCCCCccHHHHHHHHhcCCCceE--EEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 94 --RTIPPLKYEYYYALLRDFPDLTF--TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 94 --~~i~~~~~~~i~~l~~~~~~ipV--i~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
..+ ...|+.+.++++. +++|| |+||||.|++|+.+++++||||||||||++..|.
T Consensus 179 ~a~~~-~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~D 237 (291)
T 3o07_A 179 VAEEM-RVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSN 237 (291)
T ss_dssp HHHHH-TSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred ccccc-CCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCC
Confidence 000 2348888888876 68998 5799999999999999999999999999998544
No 41
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.47 E-value=8.1e-14 Score=131.28 Aligned_cols=146 Identities=16% Similarity=0.230 Sum_probs=102.4
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+.+|.+..+.++++++.+++||.+|.+.. .++ ++.+.++|+|.|+| |+..+. .+ .+.
T Consensus 207 ~~~~~~~~~~i~~l~~~~~~pv~vK~~~~------~e~-----a~~a~~~Gad~I~vs~~ggr~~-~~---------~~~ 265 (370)
T 1gox_A 207 QIDRSLSWKDVAWLQTITSLPILVKGVIT------AED-----ARLAVQHGAAGIIVSNHGARQL-DY---------VPA 265 (370)
T ss_dssp TBCTTCCHHHHHHHHHHCCSCEEEECCCS------HHH-----HHHHHHTTCSEEEECCGGGTSS-TT---------CCC
T ss_pred hcCccchHHHHHHHHHHhCCCEEEEecCC------HHH-----HHHHHHcCCCEEEECCCCCccC-CC---------ccc
Confidence 55777777889999999999999998732 222 23567899999999 542211 11 122
Q ss_pred cHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHHHHHH
Q 023442 100 KYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQ 178 (282)
Q Consensus 100 ~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~~~~~ 178 (282)
.++.+.++++... ++|||++|||.|.+|+.+++..|||+|||||+++.... . .|. ....+.++.+.
T Consensus 266 ~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~------~---~G~----~gv~~~~~~l~ 332 (370)
T 1gox_A 266 TIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLA------A---EGE----AGVKKVLQMMR 332 (370)
T ss_dssp HHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH------H---HHH----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHh------h---ccH----HHHHHHHHHHH
Confidence 4787878776543 79999999999999999999999999999997653311 0 111 12235666777
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHH
Q 023442 179 IYGDAILGTYGNNRPHVRDVMKPLL 203 (282)
Q Consensus 179 ~~~~~~~~~~g~~~~~~~~~rk~~~ 203 (282)
+.++..+..+|. ..+..++++..
T Consensus 333 ~el~~~m~~~G~--~~i~el~~~~l 355 (370)
T 1gox_A 333 DEFELTMALSGC--RSLKEISRSHI 355 (370)
T ss_dssp HHHHHHHHHHTC--SBTTTCCGGGE
T ss_pred HHHHHHHHHhCC--CCHHHhhhcce
Confidence 777777778885 24566666654
No 42
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.44 E-value=5.9e-13 Score=117.62 Aligned_cols=134 Identities=15% Similarity=0.255 Sum_probs=95.7
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEE----ecCCCCCCC-cHHHHHHHHHHHHHhCCCCEE
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK----CRIGVDDHD-SYNQLCDFIYKVSSLSPTRHF 76 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvK----iR~G~d~~~-~~~e~~~~v~~~le~~Gv~~i 76 (282)
+++|| ..|. .|+.++.+|+.+.++++.....+.+.++++ .+.||.+.. +..+. ++.+++.|++.|
T Consensus 94 l~~Ga--d~V~----lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~----~~~~~~~G~~~i 163 (244)
T 1vzw_A 94 LATGC--TRVN----LGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYET----LDRLNKEGCARY 163 (244)
T ss_dssp HHTTC--SEEE----ECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHH----HHHHHHTTCCCE
T ss_pred HHcCC--CEEE----ECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHH----HHHHHhCCCCEE
Confidence 34566 3455 588899999999999998764443444433 135787643 33332 344678999999
Q ss_pred EEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc---CCCEEEecHHhhhCCccch
Q 023442 77 IIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK---GAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 77 ~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~---g~DgVmIGRgal~nP~if~ 153 (282)
.+|++++...+. ...|+.+.++++. .++|||++|||.+++|+.++++. |||+||+||+++.+||.|
T Consensus 164 ~~~~~~~~~~~~---------g~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~- 232 (244)
T 1vzw_A 164 VVTDIAKDGTLQ---------GPNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTL- 232 (244)
T ss_dssp EEEEC----------------CCCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCH-
T ss_pred EEeccCcccccC---------CCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCH-
Confidence 999876532221 1248888888765 58999999999999999999995 999999999999999985
Q ss_pred hhh
Q 023442 154 GHV 156 (282)
Q Consensus 154 ~~~ 156 (282)
.++
T Consensus 233 ~~~ 235 (244)
T 1vzw_A 233 EEA 235 (244)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 43
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.44 E-value=1.7e-13 Score=129.50 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+|++..++++++++.+++||.+|. +. +.++ ++.+.++|+|.|.| |++++...|. ..+
T Consensus 209 ~p~~~~~~i~~i~~~~~~Pv~vkg---v~---t~e~-----a~~a~~aGad~I~vs~~gg~~~d~~~----------~~~ 267 (380)
T 1p4c_A 209 DASFNWEALRWLRDLWPHKLLVKG---LL---SAED-----ADRCIAEGADGVILSNHGGRQLDCAI----------SPM 267 (380)
T ss_dssp CTTCCHHHHHHHHHHCCSEEEEEE---EC---CHHH-----HHHHHHTTCSEEEECCGGGTSCTTCC----------CGG
T ss_pred CccccHHHHHHHHHhcCCCEEEEe---cC---cHHH-----HHHHHHcCCCEEEEcCCCCCcCCCCc----------CHH
Confidence 788888999999999999999994 32 2222 34567899999999 7765432221 136
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHHHHHHHHH
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYG 181 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 181 (282)
+.+.++++. .++|||++|||.|.+|+.+++..|||+||+||+++.... . .|. ....+.++.+.+.+
T Consensus 268 ~~l~~v~~~-~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~------~---~g~----~~v~~~~~~l~~el 333 (380)
T 1p4c_A 268 EVLAQSVAK-TGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLA------A---RGE----TGVDEVLTLLKADI 333 (380)
T ss_dssp GTHHHHHHH-HCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHH------H---HHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHH------h---cCH----HHHHHHHHHHHHHH
Confidence 666677664 367999999999999999999999999999999975321 0 121 12345667777778
Q ss_pred HHHHHhcCCCchHHHHHHHHHH
Q 023442 182 DAILGTYGNNRPHVRDVMKPLL 203 (282)
Q Consensus 182 ~~~~~~~g~~~~~~~~~rk~~~ 203 (282)
+.....+|. ..+..++++.+
T Consensus 334 ~~~m~~~G~--~~i~el~~~~l 353 (380)
T 1p4c_A 334 DRTLAQIGC--PDITSLSPDYL 353 (380)
T ss_dssp HHHHHHHTC--CBGGGCCGGGE
T ss_pred HHHHHHhCC--CCHHHhccCeE
Confidence 888888886 25667777754
No 44
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.41 E-value=1.7e-14 Score=128.14 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=17.0
Q ss_pred ccccccCCHHHHHHHHHHHh-hcC----Ccc-----EEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcc--
Q 023442 17 FGVSLMLDPKFVGEAMSVIA-ANT----NVP-----VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-- 84 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~-~~~----~ip-----vsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~-- 84 (282)
.|+.++.+|+++.++.+.+- +.+ +.+ ..|+++ ||.+.... +..+ +++.+++.|++.|.+|.+++.
T Consensus 107 ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~-g~~~~~~~-~~~~-~a~~~~~~G~~~i~~t~~~~~g~ 183 (247)
T 3tdn_A 107 INTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTY-SGKKNTGI-LLRD-WVVEVEKRGAGEILLTSIDRDGT 183 (247)
T ss_dssp CSHHHHHCTHHHHHHHHHHC------------------------------------------------------------
T ss_pred hhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEEC-CCcccCCC-CHHH-HHHHHHhcCCCEEEEecccCCCC
Confidence 58888999999999988873 322 222 245665 77763221 1222 345678899999999987642
Q ss_pred cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhh
Q 023442 85 LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHV 156 (282)
Q Consensus 85 ~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~ 156 (282)
+.| .+++.+.++++. .++|||++|||.|++|+.++++.|||+||+||+++.+||+| .++
T Consensus 184 ~~g-----------~~~~~~~~i~~~-~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~-~~~ 242 (247)
T 3tdn_A 184 KSG-----------YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLI-TQI 242 (247)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cCC-----------CCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHH-HHH
Confidence 222 125666666554 58999999999999999999999999999999999999986 444
No 45
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.40 E-value=4.4e-13 Score=132.41 Aligned_cols=123 Identities=9% Similarity=0.026 Sum_probs=91.6
Q ss_pred cccccCCHHHHHHHHHHHhhcCCccEEEEe----------------------------------cCCCCCCC--cHHHHH
Q 023442 18 GVSLMLDPKFVGEAMSVIAANTNVPVSVKC----------------------------------RIGVDDHD--SYNQLC 61 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~~ipvsvKi----------------------------------R~G~d~~~--~~~e~~ 61 (282)
++.++.+|+++.++.+..-+. .+-+++.+ +.||++.. +..+
T Consensus 380 ~~~~~~~~~~i~~~~~~~g~~-~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e-- 456 (555)
T 1jvn_A 380 LGNRGDGTSPIETISKAYGAQ-AVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWE-- 456 (555)
T ss_dssp TTSCCCSCSHHHHHHHHHCGG-GEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHH--
T ss_pred ccccccCHHHHHHHHHHhCCC-cEEEEEEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHH--
Confidence 445677899999999987531 12222222 23676532 2333
Q ss_pred HHHHHHHHhCCCCEEEEecCCc--ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCE
Q 023442 62 DFIYKVSSLSPTRHFIIHSRKA--LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 138 (282)
Q Consensus 62 ~~v~~~le~~Gv~~i~VH~Rt~--~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~Dg 138 (282)
.++.+++.|++.|.+|++++ .++|. +|+.+.++++. .++|||+||||.|++|+.++++ +|||+
T Consensus 457 --~a~~~~~~Ga~~il~t~~~~dG~~~G~-----------d~~li~~l~~~-~~iPVIasGGi~s~~d~~~~~~~~G~~g 522 (555)
T 1jvn_A 457 --LTRACEALGAGEILLNCIDKDGSNSGY-----------DLELIEHVKDA-VKIPVIASSGAGVPEHFEEAFLKTRADA 522 (555)
T ss_dssp --HHHHHHHTTCCEEEECCGGGTTTCSCC-----------CHHHHHHHHHH-CSSCEEECSCCCSHHHHHHHHHHSCCSE
T ss_pred --HHHHHHHcCCCEEEEeCCCCCCCCCCC-----------CHHHHHHHHHh-CCccEEEECCCCCHHHHHHHHHhcCChH
Confidence 34567899999999999875 33332 38988888775 5899999999999999999998 99999
Q ss_pred EEecHHhhhCCccchhhhHh
Q 023442 139 VMVGRAAYQNPWYTLGHVDT 158 (282)
Q Consensus 139 VmIGRgal~nP~if~~~~~~ 158 (282)
||+||+++.+||.| .+++.
T Consensus 523 vivg~a~~~~~~~~-~e~~~ 541 (555)
T 1jvn_A 523 CLGAGMFHRGEFTV-NDVKE 541 (555)
T ss_dssp EEESHHHHTTSCCH-HHHHH
T ss_pred HHHHHHHHcCCCCH-HHHHH
Confidence 99999999999996 55544
No 46
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.33 E-value=9.1e-12 Score=115.41 Aligned_cols=137 Identities=18% Similarity=0.117 Sum_probs=90.6
Q ss_pred HHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCc-------ccC---CCCc-CCcC
Q 023442 28 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKA-------LLN---GISP-AENR 94 (282)
Q Consensus 28 ~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~-------~~~---G~~~-ad~~ 94 (282)
+.++++++++ +++||.||. +|+.. +.++ ++.++++|+|+|+| |+++. ... +... .++
T Consensus 170 ~~~~i~~vr~-~~~Pv~vK~-v~~g~--~~e~-----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~- 239 (332)
T 1vcf_A 170 LVERLAELLP-LPFPVMVKE-VGHGL--SREA-----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEI- 239 (332)
T ss_dssp HHHHHHHHCS-CSSCEEEEC-SSSCC--CHHH-----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTC-
T ss_pred HHHHHHHHHc-CCCCEEEEe-cCCCC--CHHH-----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhc-
Confidence 5788999999 999999994 23322 2222 34678999999999 76641 000 0000 011
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCcccHHHHH
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVV 174 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~~~~~~ 174 (282)
.+..++.+.++++...++|||++|||.|.+|+.+++..|||+||+||+++..+ ..|. ....+++
T Consensus 240 --g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~----------~~G~----~gv~~~~ 303 (332)
T 1vcf_A 240 --GIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA----------LEGA----ERVAAWI 303 (332)
T ss_dssp --SCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH----------TTCH----HHHHHHH
T ss_pred --cccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH----------hccH----HHHHHHH
Confidence 12247777777765447999999999999999999999999999999765432 0121 1223555
Q ss_pred HHHHHHHHHHHHhcCC
Q 023442 175 EKYQIYGDAILGTYGN 190 (282)
Q Consensus 175 ~~~~~~~~~~~~~~g~ 190 (282)
+.+.+.++..+..+|.
T Consensus 304 ~~l~~el~~~m~~~G~ 319 (332)
T 1vcf_A 304 GDYLEELRTALFAIGA 319 (332)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 6666666666666664
No 47
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.31 E-value=7.7e-12 Score=110.70 Aligned_cols=122 Identities=10% Similarity=0.076 Sum_probs=90.5
Q ss_pred ccccccCCHHHHHHHHHHHhh-c--CCccE-------EEEecCCCCCCC--cHHHHHHHHHHHHHhCCCCEEEEecCCcc
Q 023442 17 FGVSLMLDPKFVGEAMSVIAA-N--TNVPV-------SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKAL 84 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~-~--~~ipv-------svKiR~G~d~~~--~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~ 84 (282)
.|+.++.+|+.+.++.+.... . +.+++ .|++ .||.+.. +..+. ++.+++.|++.|.+|++++.
T Consensus 103 lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~-~g~~~~~~~~~~e~----~~~~~~~G~~~i~~~~~~~~ 177 (252)
T 1ka9_F 103 VNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHV-AGGRVPTGLHAVEW----AVKGVELGAGEILLTSMDRD 177 (252)
T ss_dssp ECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEE-TTTTEEEEEEHHHH----HHHHHHHTCCEEEEEETTTT
T ss_pred EChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEE-CCCccccCCcHHHH----HHHHHHcCCCEEEEecccCC
Confidence 588889999999999988752 1 22222 4555 3776532 23332 23456789999999976532
Q ss_pred --cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhh
Q 023442 85 --LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHV 156 (282)
Q Consensus 85 --~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~ 156 (282)
..| .+|+.+.++++. .++|||++|||.+++|+.+++++||||||+|++++.+||.| .++
T Consensus 178 g~~~g-----------~~~~~i~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~-~~~ 238 (252)
T 1ka9_F 178 GTKEG-----------YDLRLTRMVAEA-VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPI-PKL 238 (252)
T ss_dssp TTCSC-----------CCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCH-HHH
T ss_pred CCcCC-----------CCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCH-HHH
Confidence 222 138888888775 58999999999999999999999999999999999999885 444
No 48
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.31 E-value=1.7e-12 Score=114.67 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=93.3
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcC--CccE---EEEecCCCCCCC--cHHHHHHHHHHHHHhCCCC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPV---SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTR 74 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~--~ipv---svKiR~G~d~~~--~~~e~~~~v~~~le~~Gv~ 74 (282)
+..|| ..|. .|+.++.+|+++.++ +...+.+ ++.+ .|++ .||++.. +..++ ++.+++.|++
T Consensus 92 ~~~Ga--d~V~----lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~~~~e~----~~~~~~~G~~ 159 (241)
T 1qo2_A 92 RKLGY--RRQI----VSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEIDPVSL----LKRLKEYGLE 159 (241)
T ss_dssp HHTTC--CEEE----ECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCCCHHHH----HHHHHTTTCC
T ss_pred HHCCC--CEEE----ECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCCCHHHH----HHHHHhCCCC
Confidence 34565 3454 588899999998888 7764332 2223 4455 4787643 33343 3446789999
Q ss_pred EEEEecCCcc--cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-c----C-CCEEEecHHhh
Q 023442 75 HFIIHSRKAL--LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-K----G-AHHVMVGRAAY 146 (282)
Q Consensus 75 ~i~VH~Rt~~--~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~----g-~DgVmIGRgal 146 (282)
.|.+|.+++. +.|. +|+.+.++++. .++|||++|||.|++|+.++++ + | |||||+|++++
T Consensus 160 ~i~~t~~~~~g~~~g~-----------~~~~i~~l~~~-~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~ 227 (241)
T 1qo2_A 160 EIVHTEIEKDGTLQEH-----------DFSLTKKIAIE-AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFL 227 (241)
T ss_dssp EEEEEETTHHHHTCCC-----------CHHHHHHHHHH-HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHH
T ss_pred EEEEEeecccccCCcC-----------CHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHH
Confidence 9999997642 2231 38888888775 4899999999999999999998 5 9 99999999999
Q ss_pred hCCccc
Q 023442 147 QNPWYT 152 (282)
Q Consensus 147 ~nP~if 152 (282)
..+.-+
T Consensus 228 ~~~~~~ 233 (241)
T 1qo2_A 228 EGILTV 233 (241)
T ss_dssp TTSSCH
T ss_pred cCCCCH
Confidence 999863
No 49
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.29 E-value=1.1e-11 Score=109.02 Aligned_cols=103 Identities=12% Similarity=0.126 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEe---cCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKi---R~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++.+.+.+++++++++ |+++|+ +.+|++ +++. .++++++++|+|+| +.+|+.+.|. + .
T Consensus 100 ~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~----~~~~-~~a~~a~eaGad~I--~tstg~~~gg--a--------~ 161 (225)
T 1mzh_A 100 KYDFVVEELKEIFRETP-SAVHKVIVETPYLNE----EEIK-KAVEICIEAGADFI--KTSTGFAPRG--T--------T 161 (225)
T ss_dssp CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCH----HHHH-HHHHHHHHHTCSEE--ECCCSCSSSC--C--------C
T ss_pred ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCH----HHHH-HHHHHHHHhCCCEE--EECCCCCCCC--C--------C
Confidence 34677788999999988 999999 777754 2333 35677889999999 5555432221 1 3
Q ss_pred HHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 101 YEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 101 ~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
|+.++.+++.. .++||+++|||+|++|+.++++.|||.|-++++
T Consensus 162 ~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 162 LEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 77777766542 379999999999999999999999997766665
No 50
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.28 E-value=1.4e-11 Score=109.07 Aligned_cols=121 Identities=9% Similarity=0.040 Sum_probs=89.1
Q ss_pred ccccccCCHHHHHHHHHHHhh-cCCccE---------EEEecCCCCCCC--cHHHHHHHHHHHHHhCCCCEEEEecCCcc
Q 023442 17 FGVSLMLDPKFVGEAMSVIAA-NTNVPV---------SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKAL 84 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~-~~~ipv---------svKiR~G~d~~~--~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~ 84 (282)
.|+.++.+|+.+.++++.+.. .+.+.+ .|++ .||.+.. +..+. ++.+++.|++.|.+|.+++.
T Consensus 102 lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~-~g~~~~~~~~~~e~----~~~~~~~G~~~i~~~~~~~~ 176 (253)
T 1thf_D 102 INTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFT-YSGKKNTGILLRDW----VVEVEKRGAGEILLTSIDRD 176 (253)
T ss_dssp ESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEE-TTTTEEEEEEHHHH----HHHHHHTTCSEEEEEETTTT
T ss_pred EChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEE-CCCccccCCCHHHH----HHHHHHCCCCEEEEEeccCC
Confidence 588889999999999988753 221222 4555 3676532 23332 23456899999999977643
Q ss_pred cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 85 LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 85 ~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
..+. ..+|+.+.++++. .++|||++|||.+++|+.+++++|||+||+|++++.+||.+
T Consensus 177 g~~~---------g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~ 234 (253)
T 1thf_D 177 GTKS---------GYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDV 234 (253)
T ss_dssp TSCS---------CCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCH
T ss_pred CCCC---------CCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCH
Confidence 2111 1138888888765 58999999999999999999999999999999999999875
No 51
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.21 E-value=2e-11 Score=108.99 Aligned_cols=123 Identities=10% Similarity=0.023 Sum_probs=77.9
Q ss_pred cccccc-C--CHHHHHHHHHHHh---hc--CCccE-------EEEecCCCCCCC--cHHHHHHHHHHHHHhCCCCEEEEe
Q 023442 17 FGVSLM-L--DPKFVGEAMSVIA---AN--TNVPV-------SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIH 79 (282)
Q Consensus 17 yGs~Ll-~--~p~~~~eiv~~v~---~~--~~ipv-------svKiR~G~d~~~--~~~e~~~~v~~~le~~Gv~~i~VH 79 (282)
.|+.++ . +|+.+.++++... +. +.+++ .|+++ ||++.. +..+. ++.+++.|++.|.+|
T Consensus 102 lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~-g~~~~~~~~~~e~----~~~~~~~G~~~i~~t 176 (266)
T 2w6r_A 102 AASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH-SGKKNTGILLRDW----VVEVEKRGAGEILLT 176 (266)
T ss_dssp CCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET-TTTEEEEEEHHHH----HHHHHHTTCSEEEEE
T ss_pred hhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC-CCceecchhHHHH----HHHHHHcCCCEEEEE
Confidence 467777 5 8888888877665 22 23333 45664 676421 23333 234578999999999
Q ss_pred cCCcc--cCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhH
Q 023442 80 SRKAL--LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 80 ~Rt~~--~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~ 157 (282)
.+++. ..| .+++.+.++++. .++|||++|||.+++|+.+++++||||||+|++++.+||.+ .++.
T Consensus 177 ~~~~~g~~~g-----------~~~~~i~~l~~~-~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~-~~~~ 243 (266)
T 2w6r_A 177 SIDRDGTKSG-----------YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDM-RELK 243 (266)
T ss_dssp ETTTTTTCSC-----------CCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-----------
T ss_pred eecCCCCcCC-----------CCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCH-HHHH
Confidence 86542 222 237888787764 58999999999999999999999999999999999999985 5543
No 52
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.17 E-value=1.1e-10 Score=109.26 Aligned_cols=134 Identities=15% Similarity=0.068 Sum_probs=89.8
Q ss_pred cccCcccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCC-C----CCCCcHHHHHHHHHHHHHhCCCCEEEEecCCccc
Q 023442 12 AGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALL 85 (282)
Q Consensus 12 ~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G-~----d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~ 85 (282)
.+++.||+++.+|.+++.||+++|+++++ -+|.||+... + .+.+..++.+ .+++.+++.|++.+.++.....
T Consensus 189 ~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~- 266 (358)
T 4a3u_A 189 HRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFI-PAAKMLSDLDIAFLGMREGAVD- 266 (358)
T ss_dssp CCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHH-HHHHHHHHHTCSEEEEECCBTT-
T ss_pred CeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHH-HHHHhhhccCcccccccccccc-
Confidence 47899999999999999999999999884 4577766531 1 0111222323 3466778899999999864321
Q ss_pred CCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchhhhH
Q 023442 86 NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 86 ~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~~~~ 157 (282)
+..+.. ..++ + ..++ ++..+.||+. |++.|+++++++++ ..||.|++||+++.||++. +.++
T Consensus 267 -~~~~~~--~~~~--~--a~~i-k~~~~~~v~~-~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp-~k~~ 329 (358)
T 4a3u_A 267 -GTFGKT--DQPK--L--SPEI-RKVFKPPLVL-NQDYTFETAQAALDSGVADAISFGRPFIGNPDLP-RRFF 329 (358)
T ss_dssp -CSSSBC--SSCC--C--HHHH-HHHCCSCEEE-ESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHH-HHHH
T ss_pred -Cccccc--ccHH--H--HHHH-HHhcCCcEEE-eCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHH-HHHH
Confidence 110000 0111 1 1233 3334667765 56789999999999 4599999999999999984 5443
No 53
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.16 E-value=9.9e-11 Score=103.69 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=75.5
Q ss_pred EEEEecCCCCCCC-cHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccC
Q 023442 43 VSVKCRIGVDDHD-SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 121 (282)
Q Consensus 43 vsvKiR~G~d~~~-~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGd 121 (282)
.+||+|.|++... +..+ +++.++++|++.|++|..+....+. +.+++.+.++++. .++||+++|+
T Consensus 22 ~~v~~~~~~~~~~~~~~~----~a~~~~~~G~~~i~v~d~~~~~~~~---------~~~~~~i~~i~~~-~~ipvi~~Gg 87 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRD----WVVEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPL-TTLPIIASGG 87 (247)
T ss_dssp EEEEETTTTEEEEEEHHH----HHHHHHHTTCSEEEEEETTTTTCSS---------CCCHHHHHHHGGG-CCSCEEEESC
T ss_pred EEEEEcCCeecCCCCHHH----HHHHHHHcCCCEEEEEecCcccCCC---------cccHHHHHHHHHh-CCCCEEEeCC
Confidence 5788985443222 3333 3556789999999999875432221 1247888888775 5899999999
Q ss_pred CCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhH
Q 023442 122 INTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 157 (282)
Q Consensus 122 I~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~ 157 (282)
|.|++|++++++.|||+|++||+++.||+++ .++.
T Consensus 88 i~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~-~~~~ 122 (247)
T 3tdn_A 88 AGKMEHFLEAFLRGADKVSINTAAVENPSLI-TQIA 122 (247)
T ss_dssp CCSHHHHHHHHHTTCSEECCSHHHHHCTHHH-HHHH
T ss_pred CCCHHHHHHHHHcCCCeeehhhHHhhChHHH-HHHH
Confidence 9999999999999999999999999999975 5543
No 54
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.13 E-value=1.6e-10 Score=109.80 Aligned_cols=139 Identities=11% Similarity=0.007 Sum_probs=83.3
Q ss_pred cccCcccccccCCHHHHHHHHHHHhhcC-CccEEEEecCC-CC-------CCCcHHHHHHHHHHHHHh---CC--CCEEE
Q 023442 12 AGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIG-VD-------DHDSYNQLCDFIYKVSSL---SP--TRHFI 77 (282)
Q Consensus 12 ~~~g~yGs~Ll~~p~~~~eiv~~v~~~~-~ipvsvKiR~G-~d-------~~~~~~e~~~~v~~~le~---~G--v~~i~ 77 (282)
.+++.||+++.+|.+++.||+++|++++ .-||.||+... +. +.....+... ++..++. .| .+.+.
T Consensus 209 ~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 287 (400)
T 4gbu_A 209 TRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAY-VAGELEKRAKAGKRLAFVH 287 (400)
T ss_dssp CCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHH-HHHHHHHHHHTTCCCSEEE
T ss_pred CCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHH-HHHHHHHhhccCcccccee
Confidence 3689999999999999999999999988 35888877531 11 1111222222 2223332 23 34444
Q ss_pred EecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchhhh
Q 023442 78 IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLGHV 156 (282)
Q Consensus 78 VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~~~ 156 (282)
+.................... ..+.+++..++|||++|+|.+.+++.+.+. .+||.|.+||++|.||.+. +.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~-----~~~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~-~k~ 361 (400)
T 4gbu_A 288 LVEPRVTNPFLTEGEGEYEGG-----SNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLV-DRL 361 (400)
T ss_dssp EECTTCSSTTSCTTTTCCCSC-----CSTHHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHH-HHH
T ss_pred eecccCCCcccccccchhhhH-----HHHHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHH-HHH
Confidence 432211100000000000001 012233446899999999998777766665 7899999999999999984 444
Q ss_pred H
Q 023442 157 D 157 (282)
Q Consensus 157 ~ 157 (282)
+
T Consensus 362 ~ 362 (400)
T 4gbu_A 362 E 362 (400)
T ss_dssp H
T ss_pred H
Confidence 3
No 55
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.12 E-value=2.3e-10 Score=107.59 Aligned_cols=146 Identities=18% Similarity=0.143 Sum_probs=93.7
Q ss_pred HHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcc--------cC--------CCC
Q 023442 28 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKAL--------LN--------GIS 89 (282)
Q Consensus 28 ~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~--------~~--------G~~ 89 (282)
..++++.+++.+++||.||. +|+.-. . + .++.++++|+|+|+| ||+|.+ .. +..
T Consensus 175 ~~~~i~~i~~~~~vPVivK~-vG~g~s--~-~----~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~ 246 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKE-SGNGIS--M-E----TAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKN 246 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEEC-SSSCCC--H-H----HHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEe-CCCCCC--H-H----HHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccc
Confidence 67889999999999999997 776542 2 2 244678999999999 555411 00 000
Q ss_pred cCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhCCCCCccc
Q 023442 90 PAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLT 169 (282)
Q Consensus 90 ~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g~~~~~~~ 169 (282)
-.+|. +| ....+.++.+...++|||++|||.|..|+.+++..|||+||+||++ ++ .. ..|. ..
T Consensus 247 ~~~~g-~p--t~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~-----l~-~~----~~G~----~~ 309 (368)
T 3vkj_A 247 FLDWG-VP--TAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPV-----LK-SA----IEGK----ES 309 (368)
T ss_dssp TTTCS-CB--HHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHH-----HH-HH----HHCH----HH
T ss_pred ccccc-cc--HHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHH-----HH-HH----hcCh----HH
Confidence 01221 11 1244556655545799999999999999999999999999999854 43 11 1121 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 023442 170 RRQVVEKYQIYGDAILGTYGNNRPHVRDVMK 200 (282)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~rk 200 (282)
..+.++.+.+.++..+...|. + .+..+++
T Consensus 310 v~~~l~~l~~eL~~~m~~~G~-~-~i~el~~ 338 (368)
T 3vkj_A 310 LEQFFRKIIFELKAAMMLTGS-K-DVDALKK 338 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-C-BHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhCC-C-CHHHhcc
Confidence 234555555566666666775 2 3555554
No 56
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.08 E-value=6.4e-10 Score=97.38 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=87.7
Q ss_pred ccccccCCHHHHHHHHHHHhhc-----CCc-----cEEEEecCCCCCCC-cHHHHHHHHHHHHHhCCCCEEEEecCCccc
Q 023442 17 FGVSLMLDPKFVGEAMSVIAAN-----TNV-----PVSVKCRIGVDDHD-SYNQLCDFIYKVSSLSPTRHFIIHSRKALL 85 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~-----~~i-----pvsvKiR~G~d~~~-~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~ 85 (282)
.|..++.+|+.+.++.+..... ++. +++|++|.++++.. +..+. ++.+.+.|++.|.+|+++...
T Consensus 105 i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~----~~~~~~~G~d~i~~~~~~~~g 180 (253)
T 1h5y_A 105 VNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKW----AKEVEELGAGEILLTSIDRDG 180 (253)
T ss_dssp ESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHH----HHHHHHHTCSEEEEEETTTTT
T ss_pred EChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHH----HHHHHhCCCCEEEEecccCCC
Confidence 3566778899888888876421 122 25888887654321 23332 234567899999999886421
Q ss_pred CCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 86 NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 86 ~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+. ...++.+.++.+. .++||+++|||.+.+|+.++++.|||+||+|++++.+++.
T Consensus 181 ~~~---------~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 181 TGL---------GYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp TCS---------CCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC
T ss_pred CcC---------cCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC
Confidence 111 1137888888765 4899999999999999999999999999999999998865
No 57
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.03 E-value=1.1e-09 Score=102.80 Aligned_cols=111 Identities=15% Similarity=0.108 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC--Cccc-----CC---CCcCCcC
Q 023442 25 PKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KALL-----NG---ISPAENR 94 (282)
Q Consensus 25 p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R--t~~~-----~G---~~~ad~~ 94 (282)
.+-+.+.|+.+++.+++||.||. +|+.. +. +. ++.+.++|+|+|+|+++ |.+. .. ....+|.
T Consensus 191 ~~~~~~~I~~l~~~~~~PVivK~-vg~g~--s~-e~----A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g 262 (365)
T 3sr7_A 191 FRSWKKHLSDYAKKLQLPFILKE-VGFGM--DV-KT----IQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWG 262 (365)
T ss_dssp CHHHHHHHHHHHHHCCSCEEEEE-CSSCC--CH-HH----HHHHHHHTCCEEECCCBC--------------CGGGTTCS
T ss_pred HHHHHHHHHHHHHhhCCCEEEEE-CCCCC--CH-HH----HHHHHHcCCCEEEEeCCCCcccchhhcccccccccccccc
Confidence 34567889999999999999995 56543 22 22 34567899999999765 3210 00 0001221
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
+| ....+..+.....++|||++|||.|..|+.+++..|||+||+||++|
T Consensus 263 -~p--t~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l 311 (365)
T 3sr7_A 263 -QT--TAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTML 311 (365)
T ss_dssp -CB--HHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred -cc--HHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 11 13444443222247999999999999999999999999999999654
No 58
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.03 E-value=2e-10 Score=105.12 Aligned_cols=133 Identities=22% Similarity=0.275 Sum_probs=80.0
Q ss_pred CCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCC--------------------C-----------
Q 023442 6 CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD--------------------H----------- 54 (282)
Q Consensus 6 CP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~--------------------~----------- 54 (282)
||++...+... |+.++++++.+.+| ++.+++||.+|+|+|+.+ .
T Consensus 49 ~p~~~~~~~~~-G~~~~~~~~~i~~I----~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~ 123 (305)
T 2nv1_A 49 ERVPADIRAAG-GVARMADPTIVEEV----MNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNE 123 (305)
T ss_dssp CC-------CC-CCCCCCCHHHHHHH----HHHCSSCEEEEECTTCHHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGG
T ss_pred CCCcchhhhcc-CcccCCCHHHHHHH----HHhCCCCEEecccccchHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhc
Confidence 47776776554 77889998887666 445689999999986510 0
Q ss_pred ---------CcHHHHHHHHHHHHHhCCCCEEEEecCCcc-------------------cCCCCcCCcCC---CCCccHHH
Q 023442 55 ---------DSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-------------------LNGISPAENRT---IPPLKYEY 103 (282)
Q Consensus 55 ---------~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~-------------------~~G~~~ad~~~---i~~~~~~~ 103 (282)
.+..+ +.+.+ +.|++.|.+||-... ..|.+..+... -.+..++.
T Consensus 124 ~g~~v~~~~~~~~e----~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~ 198 (305)
T 2nv1_A 124 YTVPFVCGCRDLGE----ATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYEL 198 (305)
T ss_dssp CSSCEEEEESSHHH----HHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHH
T ss_pred cCCcEEEEeCCHHH----HHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHH
Confidence 00111 12222 567777777531100 00110000000 01234777
Q ss_pred HHHHHhcCCCceEE--EccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 104 YYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 104 i~~l~~~~~~ipVi--~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
+.++.+. .++||+ ++|||.|++|+.++++.|||+|++||+++.++
T Consensus 199 i~~i~~~-~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~ 245 (305)
T 2nv1_A 199 LLQIKKD-GKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSD 245 (305)
T ss_dssp HHHHHHH-TSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSS
T ss_pred HHHHHHh-cCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCC
Confidence 7777664 579998 99999999999999999999999999999644
No 59
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.98 E-value=2.2e-09 Score=94.62 Aligned_cols=107 Identities=14% Similarity=0.066 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
.+|+.+.++++.+++. ++++.+.+. +.++ ++.++++|+|.|.+ |++|... . .....
T Consensus 113 ~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~ee-----a~~a~~~Gad~Ig~~~~g~t~~~--~-------~~~~~ 170 (229)
T 3q58_A 113 SRPVDIDSLLTRIRLH-GLLAMADCS-------TVNE-----GISCHQKGIEFIGTTLSGYTGPI--T-------PVEPD 170 (229)
T ss_dssp CCSSCHHHHHHHHHHT-TCEEEEECS-------SHHH-----HHHHHHTTCSEEECTTTTSSSSC--C-------CSSCC
T ss_pred CChHHHHHHHHHHHHC-CCEEEEecC-------CHHH-----HHHHHhCCCCEEEecCccCCCCC--c-------CCCCC
Confidence 4677788888888764 777777543 2333 23456899999964 5555321 1 01224
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchh
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 154 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~ 154 (282)
|+.+.++++. ++|||++|||.|++|+.++++.||||||+| +++.+||.+.+
T Consensus 171 ~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VG-sai~~p~~~~~ 221 (229)
T 3q58_A 171 LAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVG-SAITRIEHICQ 221 (229)
T ss_dssp HHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEEC-HHHHCHHHHHH
T ss_pred HHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEc-hHhcChHHHHH
Confidence 8888888764 899999999999999999999999999999 55557987543
No 60
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.95 E-value=3.6e-09 Score=93.42 Aligned_cols=107 Identities=16% Similarity=0.044 Sum_probs=76.7
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~~i~~~ 99 (282)
..+|+.+.++++.+++. ++++.+.+. +.++ ++.+++.|+|.|.+ |++|...+. ...
T Consensus 112 ~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~ee-----a~~a~~~Gad~Ig~~~~g~t~~~~~---------~~~ 169 (232)
T 3igs_A 112 RQRPVAVEALLARIHHH-HLLTMADCS-------SVDD-----GLACQRLGADIIGTTMSGYTTPDTP---------EEP 169 (232)
T ss_dssp SCCSSCHHHHHHHHHHT-TCEEEEECC-------SHHH-----HHHHHHTTCSEEECTTTTSSSSSCC---------SSC
T ss_pred cCCHHHHHHHHHHHHHC-CCEEEEeCC-------CHHH-----HHHHHhCCCCEEEEcCccCCCCCCC---------CCC
Confidence 35677788888888764 677776543 2333 23456899999964 455432111 122
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccch
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~ 153 (282)
.|+.+.++++. ++|||++|||.|++|+.++++.||||||+|.+++ +|+...
T Consensus 170 ~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~-~p~~~~ 220 (232)
T 3igs_A 170 DLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT-RLEHIC 220 (232)
T ss_dssp CHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH-CHHHHH
T ss_pred CHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc-CHHHHH
Confidence 48888888764 8999999999999999999999999999995554 788653
No 61
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.94 E-value=1.6e-09 Score=102.78 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe------cCCcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH------~Rt~~~~G~~~ad~~~i 96 (282)
+|+.+.++++.+++.+ ++||.++.- .+.+ . ++.++++|+|.|.|. .++....|.+.
T Consensus 177 ~~~~~~e~i~~ir~~~~~~pviv~~v------~~~~-~----a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~------ 239 (404)
T 1eep_A 177 HSTRIIELIKKIKTKYPNLDLIAGNI------VTKE-A----ALDLISVGADCLKVGIGPGSICTTRIVAGVGV------ 239 (404)
T ss_dssp SSHHHHHHHHHHHHHCTTCEEEEEEE------CSHH-H----HHHHHTTTCSEEEECSSCSTTSHHHHHHCCCC------
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEcCC------CcHH-H----HHHHHhcCCCEEEECCCCCcCcCccccCCCCc------
Confidence 5788999999999988 899988421 1222 2 345678999999992 22211122111
Q ss_pred CCccHHHHHHHHh--cCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 97 PPLKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 97 ~~~~~~~i~~l~~--~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
+ .++.+..+.+ ...++|||++|||.|++|+.+++..|||+||+||+++..|+..
T Consensus 240 p--~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 240 P--QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESP 295 (404)
T ss_dssp C--HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSS
T ss_pred c--hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCC
Confidence 1 2455444433 1248999999999999999999999999999999999998863
No 62
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.90 E-value=6.8e-09 Score=96.04 Aligned_cols=100 Identities=16% Similarity=0.049 Sum_probs=74.6
Q ss_pred HHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHh
Q 023442 30 EAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR 109 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~ 109 (282)
++++.+++. ++||.+|+. +.++ ++.+++.|+|.|.++++.. .|..+ ....|+.+.++++
T Consensus 101 ~~i~~l~~~-g~~v~~~v~-------~~~~-----a~~~~~~GaD~i~v~g~~~--GG~~g------~~~~~~ll~~i~~ 159 (332)
T 2z6i_A 101 KYMERFHEA-GIIVIPVVP-------SVAL-----AKRMEKIGADAVIAEGMEA--GGHIG------KLTTMTLVRQVAT 159 (332)
T ss_dssp GTHHHHHHT-TCEEEEEES-------SHHH-----HHHHHHTTCSCEEEECTTS--SEECC------SSCHHHHHHHHHH
T ss_pred HHHHHHHHc-CCeEEEEeC-------CHHH-----HHHHHHcCCCEEEEECCCC--CCCCC------CccHHHHHHHHHH
Confidence 456666653 789998872 2222 2345789999999998632 22211 1224777877776
Q ss_pred cCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 110 DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 110 ~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
. .++|||++|||.|++++.++++.|||+|++||+++.+|..
T Consensus 160 ~-~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 160 A-ISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTC
T ss_pred h-cCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccc
Confidence 5 4899999999999999999999999999999999999964
No 63
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.89 E-value=1.8e-09 Score=95.13 Aligned_cols=101 Identities=9% Similarity=0.086 Sum_probs=75.4
Q ss_pred EEEEecCCCCCCCc--HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEcc
Q 023442 43 VSVKCRIGVDDHDS--YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 120 (282)
Q Consensus 43 vsvKiR~G~d~~~~--~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nG 120 (282)
..||+|.||.+... ..+..+ +++.++++|++.|++|.++....+. +.+++.+++++ . .++||+++|
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~-~a~~~~~~Gad~i~v~d~~~~~~~~---------~~~~~~i~~i~-~-~~ipvi~~G 80 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVE-LVEKLIEEGFTLIHVVDLSNAIENS---------GENLPVLEKLS-E-FAEHIQIGG 80 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHH-HHHHHHHTTCCCEEEEEHHHHHHCC---------CTTHHHHHHGG-G-GGGGEEEES
T ss_pred EEEEEeccccccceecCcCHHH-HHHHHHHcCCCEEEEecccccccCC---------chhHHHHHHHH-h-cCCcEEEEC
Confidence 57899999865421 012222 3456788999999999765321111 12377777776 4 589999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhh
Q 023442 121 GINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHV 156 (282)
Q Consensus 121 dI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~ 156 (282)
+|.+.+++.++++.|||+|++|++++.||+++ .++
T Consensus 81 gi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~-~~~ 115 (241)
T 1qo2_A 81 GIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFL-KSL 115 (241)
T ss_dssp SCCSHHHHHHHHHTTCCEEEECHHHHHCTTHH-HHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECchHhhChHHH-HHH
Confidence 99999999999999999999999999999975 555
No 64
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=98.88 E-value=3.3e-09 Score=98.41 Aligned_cols=107 Identities=16% Similarity=0.113 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHhhcCC-ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcc----cCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKAL----LNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~-ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~----~~G~~~ad~~~i 96 (282)
++....++++.+++.++ .||... . .. +. +. ++.+.++|+|.|.+ |+++.. ..|.+ +
T Consensus 132 ~~~~~~~~i~~lr~~~~~~~vi~G-~--v~---s~-e~----A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g------~ 194 (336)
T 1ypf_A 132 HSNAVINMIQHIKKHLPESFVIAG-N--VG---TP-EA----VRELENAGADATKVGIGPGKVCITKIKTGFG------T 194 (336)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEE-E--EC---SH-HH----HHHHHHHTCSEEEECSSCSTTCHHHHHHSCS------S
T ss_pred CcHHHHHHHHHHHHhCCCCEEEEC-C--cC---CH-HH----HHHHHHcCCCEEEEecCCCceeecccccCcC------C
Confidence 67888999999999985 555432 1 11 22 22 34567899999999 765421 11211 1
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
+...++.+.++++. .++|||++|||.|.+|+.+++..|||+||+||+++.-
T Consensus 195 ~g~~~~~l~~v~~~-~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t 245 (336)
T 1ypf_A 195 GGWQLAALRWCAKA-ASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGH 245 (336)
T ss_dssp TTCHHHHHHHHHHT-CSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTC
T ss_pred chhHHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhcc
Confidence 21136777787765 4899999999999999999999999999999999853
No 65
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.86 E-value=1.1e-08 Score=89.64 Aligned_cols=102 Identities=12% Similarity=0.115 Sum_probs=74.6
Q ss_pred HHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEE--EEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 27 FVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF--IIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 27 ~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i--~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
.+.++++.+++.. +.++.+.++ +.++ ++.+.++|+|.| ++++.+...++. .+.+++.
T Consensus 119 ~~~~~i~~i~~~~~~~~v~~~~~-------t~~e-----a~~a~~~Gad~i~~~v~g~~~~~~~~--------~~~~~~~ 178 (234)
T 1yxy_A 119 DIASFIRQVKEKYPNQLLMADIS-------TFDE-----GLVAHQAGIDFVGTTLSGYTPYSRQE--------AGPDVAL 178 (234)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECS-------SHHH-----HHHHHHTTCSEEECTTTTSSTTSCCS--------SSCCHHH
T ss_pred cHHHHHHHHHHhCCCCeEEEeCC-------CHHH-----HHHHHHcCCCEEeeeccccCCCCcCC--------CCCCHHH
Confidence 5567888888765 677776553 2233 223568999999 777764211111 1235788
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+.++++. ++||+++|||.|++++.++++.|||+|++||+++. |..
T Consensus 179 i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~-p~~ 223 (234)
T 1yxy_A 179 IEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR-PKE 223 (234)
T ss_dssp HHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-HHH
T ss_pred HHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-hHH
Confidence 8888764 89999999999999999999999999999999887 654
No 66
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.81 E-value=3.2e-08 Score=87.84 Aligned_cols=127 Identities=15% Similarity=0.348 Sum_probs=85.7
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEe--c-------CCCCCCC--cHHHHHHHHHHHHHh
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC--R-------IGVDDHD--SYNQLCDFIYKVSSL 70 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKi--R-------~G~d~~~--~~~e~~~~v~~~le~ 70 (282)
|+.|+ .+|+ .|+...++|+++.++.+..-... +-+++-. + -||.+.. +..+. .+.+++
T Consensus 94 l~~Ga--dkVi----i~t~a~~~p~li~e~~~~~g~q~-iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~----~~~~~~ 162 (243)
T 4gj1_A 94 LDCGV--KRVV----IGSMAIKDATLCLEILKEFGSEA-IVLALDTILKEDYVVAVNAWQEASDKKLMEV----LDFYSN 162 (243)
T ss_dssp HHTTC--SEEE----ECTTTTTCHHHHHHHHHHHCTTT-EEEEEEEEESSSEEEC--------CCBHHHH----HHHHHT
T ss_pred HHcCC--CEEE----EccccccCCchHHHHHhcccCce-EEEEEEEEeCCCCEEEecCceecccchHHHH----HHHHhh
Confidence 56676 6676 58899999999999999875432 2333332 2 1565532 23333 345678
Q ss_pred CCCCEEEEe--cCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 71 SPTRHFIIH--SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 71 ~Gv~~i~VH--~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
.|+..|.+| .|.++.+|. +.+.+.++.+..+++|||++||+.|.+|++++ +.+++||.+|++++.+
T Consensus 163 ~g~~eil~t~Id~DGt~~G~-----------d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~g 230 (243)
T 4gj1_A 163 KGLKHILCTDISKDGTMQGV-----------NVRLYKLIHEIFPNICIQASGGVASLKDLENL-KGICSGVIVGKALLDG 230 (243)
T ss_dssp TTCCEEEEEETTC-----CC-----------CHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHTT
T ss_pred cCCcEEEeeeecccccccCC-----------CHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHCC
Confidence 999999998 466666664 27777777776678999999999999999876 5579999999998766
Q ss_pred Ccc
Q 023442 149 PWY 151 (282)
Q Consensus 149 P~i 151 (282)
-.-
T Consensus 231 ~i~ 233 (243)
T 4gj1_A 231 VFS 233 (243)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 67
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.78 E-value=3.7e-08 Score=85.40 Aligned_cols=110 Identities=17% Similarity=0.203 Sum_probs=74.8
Q ss_pred CH-HHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe--cCCcccCCCCcCCcCCCCCc
Q 023442 24 DP-KFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH--SRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 24 ~p-~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH--~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+| ..+.++++.+++.+ +.++.+.+. +.++. +.+++.|++.|.+. +.|....+. .....
T Consensus 101 ~p~~~~~~~i~~~~~~~~~~~v~~~~~-------t~~e~-----~~~~~~G~d~i~~~~~g~t~~~~~~------~~~~~ 162 (223)
T 1y0e_A 101 RPKETLDELVSYIRTHAPNVEIMADIA-------TVEEA-----KNAARLGFDYIGTTLHGYTSYTQGQ------LLYQN 162 (223)
T ss_dssp CSSSCHHHHHHHHHHHCTTSEEEEECS-------SHHHH-----HHHHHTTCSEEECTTTTSSTTSTTC------CTTHH
T ss_pred CcccCHHHHHHHHHHhCCCceEEecCC-------CHHHH-----HHHHHcCCCEEEeCCCcCcCCCCCC------CCCcc
Confidence 44 34567788887765 667766442 23332 23568999999763 443211111 00122
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccch
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~ 153 (282)
.++.+.++++. .++||+++|||.|++++.++++.|||+|++||+++. |+...
T Consensus 163 ~~~~~~~~~~~-~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~-p~~~~ 214 (223)
T 1y0e_A 163 DFQFLKDVLQS-VDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR-PKEIT 214 (223)
T ss_dssp HHHHHHHHHHH-CCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC-HHHHH
T ss_pred cHHHHHHHHhh-CCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC-cHHHH
Confidence 47778888775 489999999999999999999999999999998665 77543
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.77 E-value=1.2e-07 Score=92.43 Aligned_cols=114 Identities=18% Similarity=0.089 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe---cCCcccCCCCcCCcCCCC-C
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH---SRKALLNGISPAENRTIP-P 98 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH---~Rt~~~~G~~~ad~~~i~-~ 98 (282)
+++...++++++++.+ ++||.+|- . .+.++ ++.+.++|+|+|.|. |.+...... .++ ..+ +
T Consensus 279 ~~~~~~~~i~~i~~~~~~~pvi~~~---v---~t~~~-----a~~l~~aGad~I~vg~~~G~~~~t~~~--~~~-g~~~~ 344 (514)
T 1jcn_A 279 NSVYQIAMVHYIKQKYPHLQVIGGN---V---VTAAQ-----AKNLIDAGVDGLRVGMGCGSICITQEV--MAC-GRPQG 344 (514)
T ss_dssp CSHHHHHHHHHHHHHCTTCEEEEEE---E---CSHHH-----HHHHHHHTCSEEEECSSCSCCBTTBCC--CSC-CCCHH
T ss_pred cchhHHHHHHHHHHhCCCCceEecc---c---chHHH-----HHHHHHcCCCEEEECCCCCcccccccc--cCC-Cccch
Confidence 4577889999999988 89998862 1 12222 345678999999882 111110000 001 011 2
Q ss_pred ccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 99 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
..+..+.++++. .++|||++|||.+++|+.+++..|||+||+||+++..|+..
T Consensus 345 ~~~~~~~~~~~~-~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 345 TAVYKVAEYARR-FGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAP 397 (514)
T ss_dssp HHHHHHHHHHGG-GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSS
T ss_pred hHHHHHHHHHhh-CCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCC
Confidence 235556666664 48999999999999999999999999999999999999764
No 69
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.73 E-value=1.2e-08 Score=99.52 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe------cCCcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH------~Rt~~~~G~~~ad~~~i 96 (282)
+.+.+.++++++++.+ ++||.++.- .+.++ ++.+.++|+|.|.|- ..++...|...
T Consensus 255 ~~~~~~~~i~~ir~~~p~~~Vi~g~v------~t~e~-----a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~------ 317 (496)
T 4fxs_A 255 HSEGVLQRIRETRAAYPHLEIIGGNV------ATAEG-----ARALIEAGVSAVKVGIGPGSICTTRIVTGVGV------ 317 (496)
T ss_dssp TSHHHHHHHHHHHHHCTTCCEEEEEE------CSHHH-----HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCC------
T ss_pred cchHHHHHHHHHHHHCCCceEEEccc------CcHHH-----HHHHHHhCCCEEEECCCCCcCcccccccCCCc------
Confidence 4567788999999987 789988521 12221 344578999999984 22222233211
Q ss_pred CCccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 97 PPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 97 ~~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
| .+..+.++++. ..++|||++|||.+++|+.+++..|||+||+|+.+++-.
T Consensus 318 p--~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~ 370 (496)
T 4fxs_A 318 P--QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTE 370 (496)
T ss_dssp C--HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred c--HHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCC
Confidence 1 25656555442 137999999999999999999999999999999987644
No 70
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.72 E-value=3.5e-08 Score=93.63 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEec------CCcccCCCCcCCcCCCC
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS------RKALLNGISPAENRTIP 97 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~------Rt~~~~G~~~ad~~~i~ 97 (282)
+++.+.++++.+++.+++||.++.= .+.++ ++.+.++|+|+|.++. .++...|.. .|
T Consensus 168 ~~~~~~e~I~~ik~~~~i~Vi~g~V------~t~e~-----A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g------~p 230 (400)
T 3ffs_A 168 HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEA-----TKELIENGADGIKVGIGPGSICTTRIVAGVG------VP 230 (400)
T ss_dssp SBHHHHHHHHHHHTTCCCEEEEEEE------CSHHH-----HHHHHHTTCSEEEECC---------CCSCBC------CC
T ss_pred CcccHHHHHHHHHhcCCCeEEEeec------CCHHH-----HHHHHHcCCCEEEEeCCCCcCcccccccccc------hh
Confidence 4677788899999888889988531 12222 2356789999999942 111111111 11
Q ss_pred CccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 98 PLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 98 ~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+..+.++++. ..++|||++|||.+.+|+.+++..|||+||+|+.++.-+.-
T Consensus 231 --~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es 284 (400)
T 3ffs_A 231 --QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEES 284 (400)
T ss_dssp --HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTS
T ss_pred --HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCC
Confidence 35666665532 24899999999999999999999999999999999887653
No 71
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.68 E-value=2.2e-08 Score=93.89 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC------CcccCCCCcCCcCCCC
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR------KALLNGISPAENRTIP 97 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R------t~~~~G~~~ad~~~i~ 97 (282)
+++.+.+.++.+++.+++||.++.- .+.++ ++.+.++|+|.|.|... ++...|.. .|
T Consensus 129 ~~~~~~~~i~~i~~~~~~~Vivg~v------~t~e~-----A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g------~p 191 (361)
T 3khj_A 129 HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEA-----TKELIENGADGIKVGIGPGSICTTRIVAGVG------VP 191 (361)
T ss_dssp SBHHHHHHHHHHHHHCCCEEEEEEE------CSHHH-----HHHHHHTTCSEEEECSSCCTTCCHHHHTCBC------CC
T ss_pred CcHHHHHHHHHHHHhcCCcEEEccC------CCHHH-----HHHHHHcCcCEEEEecCCCcCCCcccccCCC------CC
Confidence 5678888999999888999988532 12222 23467899999999421 11111211 11
Q ss_pred CccHHHHHHHH---hcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 98 PLKYEYYYALL---RDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 98 ~~~~~~i~~l~---~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+..+.++. +. .++|||++|||.+.+|+.+++..|||+||+|++++..+..
T Consensus 192 --~~~~i~~v~~~~~~-~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Es 245 (361)
T 3khj_A 192 --QITAIEKCSSVASK-FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEES 245 (361)
T ss_dssp --HHHHHHHHHHHHHH-HTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTS
T ss_pred --cHHHHHHHHHHHhh-cCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcC
Confidence 255554443 32 4799999999999999999999999999999999987764
No 72
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.67 E-value=4.9e-08 Score=86.14 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=64.3
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|++.|+++..+....+. +..++.++++++. .++||+++|+|.+++++.++++.|||+|++|++
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~---------~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEKR---------KTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSHH---------HHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHcCCCEEEEECCchhhcCC---------cccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 456789999999999765422111 1236667777664 589999999999999999999999999999999
Q ss_pred hhhCCccchhhh
Q 023442 145 AYQNPWYTLGHV 156 (282)
Q Consensus 145 al~nP~if~~~~ 156 (282)
++.+|+++ .++
T Consensus 106 ~l~~p~~~-~~~ 116 (253)
T 1thf_D 106 AVENPSLI-TQI 116 (253)
T ss_dssp HHHCTHHH-HHH
T ss_pred HHhChHHH-HHH
Confidence 99999975 443
No 73
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.64 E-value=2.8e-07 Score=86.22 Aligned_cols=109 Identities=14% Similarity=0.096 Sum_probs=74.3
Q ss_pred HHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCCCcCCc-C-CCCCccHHHHHH
Q 023442 30 EAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAEN-R-TIPPLKYEYYYA 106 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-~~~G~~~ad~-~-~i~~~~~~~i~~ 106 (282)
++++.+++. +++|.+++. +.++ ++.+++.|+|+|.++++.. .+.|....+. . ..+...|+.+.+
T Consensus 136 ~~i~~~~~~-g~~v~~~v~-------t~~~-----a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~ 202 (369)
T 3bw2_A 136 EVIARLRRA-GTLTLVTAT-------TPEE-----ARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQ 202 (369)
T ss_dssp HHHHHHHHT-TCEEEEEES-------SHHH-----HHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHH
T ss_pred HHHHHHHHC-CCeEEEECC-------CHHH-----HHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHH
Confidence 445555543 677877652 2222 2345689999999988652 1222210000 0 000113788877
Q ss_pred HHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 107 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 107 l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
+++. .++|||+.|||.|++++.++++.|||+|++||+++.+|+..
T Consensus 203 i~~~-~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 203 VREA-VDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp HHHH-CSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCC
T ss_pred HHHh-cCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccC
Confidence 7765 48999999999999999999999999999999999999863
No 74
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.62 E-value=3.8e-08 Score=95.75 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe------cCCcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH------~Rt~~~~G~~~ad~~~i 96 (282)
++..+.++++.+++.+ ++||.++.- .+.++ ++.+.++|+|+|.|- ..++...|.+.
T Consensus 253 ~~~~~~~~v~~i~~~~p~~~Vi~g~v------~t~e~-----a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~------ 315 (490)
T 4avf_A 253 HSKGVIERVRWVKQTFPDVQVIGGNI------ATAEA-----AKALAEAGADAVKVGIGPGSICTTRIVAGVGV------ 315 (490)
T ss_dssp SBHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH-----HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCC------
T ss_pred cchhHHHHHHHHHHHCCCceEEEeee------CcHHH-----HHHHHHcCCCEEEECCCCCcCCCccccCCCCc------
Confidence 4567788899999887 789988521 12222 345678999999982 22222223211
Q ss_pred CCccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 97 PPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 97 ~~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
| .+..+.++++. ..++|||++|||.+++|+.++++.|||+||+|++++.-.
T Consensus 316 p--~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~ 368 (490)
T 4avf_A 316 P--QISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTE 368 (490)
T ss_dssp C--HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBT
T ss_pred c--HHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCC
Confidence 1 36666666542 237999999999999999999999999999999998754
No 75
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.62 E-value=6.2e-08 Score=91.50 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=68.9
Q ss_pred HHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC--C--cccCCCCcCCcCCCCCccHHHHHHH
Q 023442 32 MSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--K--ALLNGISPAENRTIPPLKYEYYYAL 107 (282)
Q Consensus 32 v~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R--t--~~~~G~~~ad~~~i~~~~~~~i~~l 107 (282)
+..+++.+++||.+|- .. +.++ ++.+.++|+|.|.| ++ + +...|.. +..++.+.++
T Consensus 203 i~~l~~~~~~pvi~gg---i~---t~e~-----a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g--------~~~~~~l~~v 262 (393)
T 2qr6_A 203 LKEFIGSLDVPVIAGG---VN---DYTT-----ALHMMRTGAVGIIV-GGGENTNSLALGME--------VSMATAIADV 262 (393)
T ss_dssp HHHHHHHCSSCEEEEC---CC---SHHH-----HHHHHTTTCSEEEE-SCCSCCHHHHTSCC--------CCHHHHHHHH
T ss_pred HHHHHHhcCCCEEECC---cC---CHHH-----HHHHHHcCCCEEEE-CCCcccccccCCCC--------CChHHHHHHH
Confidence 5666777799999962 22 2222 23456899999999 44 1 1111211 1135556554
Q ss_pred Hhc-------CC--CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 108 LRD-------FP--DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 108 ~~~-------~~--~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.+. .. ++|||++|||.|.+|+.+++..|||+||+||+++..+.
T Consensus 263 ~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 263 AAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred HHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCC
Confidence 443 22 39999999999999999999999999999999999886
No 76
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.61 E-value=6.7e-08 Score=90.47 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCC-c---ccCCCCcCCcCCCC
Q 023442 25 PKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRK-A---LLNGISPAENRTIP 97 (282)
Q Consensus 25 p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt-~---~~~G~~~ad~~~i~ 97 (282)
++.+.++++.+++.+ ++||.+|.- .+.++ ++.+.++|+|+|.| |+.. . ...|.. +|
T Consensus 125 ~~~~~e~I~~ir~~~~~~~Vi~G~V------~T~e~-----A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g------~p 187 (361)
T 3r2g_A 125 AKYVGKTLKSLRQLLGSRCIMAGNV------ATYAG-----ADYLASCGADIIKAGIGGGSVCSTRIKTGFG------VP 187 (361)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEEEE------CSHHH-----HHHHHHTTCSEEEECCSSSSCHHHHHHHCCC------CC
T ss_pred cHhHHHHHHHHHHhcCCCeEEEcCc------CCHHH-----HHHHHHcCCCEEEEcCCCCcCccccccCCcc------HH
Confidence 456778899999876 789998721 12222 34567899999998 4321 1 111211 12
Q ss_pred CccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 98 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.+..+.++++.. . |||++|||.+..|+.++++.|||+||+||.++....
T Consensus 188 --~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 188 --MLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp --HHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTT
T ss_pred --HHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 356666665432 3 999999999999999999999999999999988754
No 77
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.59 E-value=9.6e-08 Score=92.67 Aligned_cols=109 Identities=18% Similarity=0.200 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc------ccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA------LLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~------~~~G~~~ad~~~i 96 (282)
.+....++++++++.+ ++||.++-- .+.++ ++.+.++|+|+|.|.+... ...|. ..
T Consensus 261 ~~~~~~e~i~~i~~~~p~~pvi~g~~------~t~e~-----a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~------g~ 323 (494)
T 1vrd_A 261 HSRRVIETLEMIKADYPDLPVVAGNV------ATPEG-----TEALIKAGADAVKVGVGPGSICTTRVVAGV------GV 323 (494)
T ss_dssp SSHHHHHHHHHHHHHCTTSCEEEEEE------CSHHH-----HHHHHHTTCSEEEECSSCSTTCHHHHHHCC------CC
T ss_pred chHHHHHHHHHHHHHCCCceEEeCCc------CCHHH-----HHHHHHcCCCEEEEcCCCCccccccccCCC------Cc
Confidence 4567778899999988 799988631 12332 2345789999999943211 11111 11
Q ss_pred CCccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 97 PPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 97 ~~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
| .+..+..+.+. ..++|||++|||.+++|+.+++..|||+||+||+++..|..
T Consensus 324 p--~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~ 378 (494)
T 1vrd_A 324 P--QLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEA 378 (494)
T ss_dssp C--HHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTS
T ss_pred c--HHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcC
Confidence 2 13433333221 24899999999999999999999999999999999998876
No 78
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.57 E-value=6.6e-07 Score=82.32 Aligned_cols=101 Identities=16% Similarity=0.109 Sum_probs=73.5
Q ss_pred HHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHh
Q 023442 30 EAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR 109 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~ 109 (282)
++++.+++. ++|+.+++. +.++ ++.+.+.|+|.|.+++++. .|..... ....|+.+.++++
T Consensus 109 ~~~~~l~~~-gi~vi~~v~-------t~~~-----a~~~~~~GaD~i~v~g~~~--GG~~G~~----~~~~~~~l~~v~~ 169 (328)
T 2gjl_A 109 EHIAEFRRH-GVKVIHKCT-------AVRH-----ALKAERLGVDAVSIDGFEC--AGHPGED----DIPGLVLLPAAAN 169 (328)
T ss_dssp HHHHHHHHT-TCEEEEEES-------SHHH-----HHHHHHTTCSEEEEECTTC--SBCCCSS----CCCHHHHHHHHHT
T ss_pred HHHHHHHHc-CCCEEeeCC-------CHHH-----HHHHHHcCCCEEEEECCCC--CcCCCCc----cccHHHHHHHHHH
Confidence 455666554 778776652 2222 2245689999999998753 2221110 1235888888776
Q ss_pred cCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 110 DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 110 ~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
. .++||+++|||.+++++.++++.|||+|++||+++..|.
T Consensus 170 ~-~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 170 R-LRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp T-CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred h-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 4 589999999999999999999999999999999999987
No 79
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.54 E-value=1.8e-07 Score=82.43 Aligned_cols=81 Identities=15% Similarity=0.212 Sum_probs=63.5
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|++.|.++..+....+ .+..++.+.++++. .++||+++|+|.+.++++++++.|||+|++|++
T Consensus 37 a~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~ 106 (252)
T 1ka9_F 37 ARAYDEAGADELVFLDISATHEE---------RAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSA 106 (252)
T ss_dssp HHHHHHHTCSCEEEEECCSSTTC---------HHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCCccccC---------ccccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 45678899999999965432111 11235667777664 589999999999999999999999999999999
Q ss_pred hhhCCccchhhh
Q 023442 145 AYQNPWYTLGHV 156 (282)
Q Consensus 145 al~nP~if~~~~ 156 (282)
++.+|+++ .++
T Consensus 107 ~l~~p~~~-~~~ 117 (252)
T 1ka9_F 107 AVRRPELI-REL 117 (252)
T ss_dssp HHHCTHHH-HHH
T ss_pred HHhCcHHH-HHH
Confidence 99999874 444
No 80
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.52 E-value=1.3e-07 Score=88.82 Aligned_cols=109 Identities=13% Similarity=0.112 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe------cCCcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH------~Rt~~~~G~~~ad~~~i 96 (282)
+++.+.+.++.+++.. ++||.+..= .+.++ ++.+.++|+|.|.+- ..|+...|.. .
T Consensus 132 ~~~~~~~~I~~ik~~~p~v~Vi~G~v------~t~e~-----A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g------~ 194 (366)
T 4fo4_A 132 HSEGVLQRIRETRAAYPHLEIIGGNV------ATAEG-----ARALIEAGVSAVKVGIGPGSICTTRIVTGVG------V 194 (366)
T ss_dssp TSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHH-----HHHHHHHTCSEEEECSSCSTTBCHHHHHCCC------C
T ss_pred CCHHHHHHHHHHHHhcCCCceEeeee------CCHHH-----HHHHHHcCCCEEEEecCCCCCCCcccccCcc------c
Confidence 4567788889998877 788876421 12222 234568999999992 1111111111 1
Q ss_pred CCccHHHHHHHHh--cCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 97 PPLKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 97 ~~~~~~~i~~l~~--~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+ .+..+.++++ ...++|||+.|||.+++|+.+++..|||+||+|+.++.-+.-
T Consensus 195 p--~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Es 249 (366)
T 4fo4_A 195 P--QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEA 249 (366)
T ss_dssp C--HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTS
T ss_pred c--hHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCC
Confidence 1 2555555543 124899999999999999999999999999999999886653
No 81
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.50 E-value=7.9e-07 Score=81.99 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=72.4
Q ss_pred HHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc
Q 023442 31 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 110 (282)
Q Consensus 31 iv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~ 110 (282)
+++.+++. +++|.+++. +.++ ++.+.+.|+|.|.++++.. .|.++ ....|+.+.++++.
T Consensus 116 ~~~~l~~~-g~~v~~~v~-------s~~~-----a~~a~~~GaD~i~v~g~~~--GG~~G------~~~~~~ll~~i~~~ 174 (326)
T 3bo9_A 116 YIRELKEN-GTKVIPVVA-------SDSL-----ARMVERAGADAVIAEGMES--GGHIG------EVTTFVLVNKVSRS 174 (326)
T ss_dssp HHHHHHHT-TCEEEEEES-------SHHH-----HHHHHHTTCSCEEEECTTS--SEECC------SSCHHHHHHHHHHH
T ss_pred HHHHHHHc-CCcEEEEcC-------CHHH-----HHHHHHcCCCEEEEECCCC--CccCC------CccHHHHHHHHHHH
Confidence 44455443 678877662 2222 2345689999999998752 22211 11248888887765
Q ss_pred CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 111 FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 111 ~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.++|||++|||.|.+|+.++++.|||+|++|++++..+..
T Consensus 175 -~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 175 -VNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVES 214 (326)
T ss_dssp -CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSC
T ss_pred -cCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccc
Confidence 4899999999999999999999999999999999998874
No 82
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.47 E-value=3.4e-07 Score=80.19 Aligned_cols=77 Identities=23% Similarity=0.242 Sum_probs=62.2
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|+++|+++..+..+.+. +. .+.++++++. .++||+.+|+|.|+++++.+++.|||+|++|++
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~---------~~-~~~i~~i~~~-~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRG---------SN-HELLAEVVGK-LDVQVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSC---------CC-HHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCcccccCC---------Ch-HHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 456788999999999765432221 11 2666777765 489999999999999999999999999999999
Q ss_pred hhhCCccc
Q 023442 145 AYQNPWYT 152 (282)
Q Consensus 145 al~nP~if 152 (282)
++.||+.+
T Consensus 106 ~l~~p~~~ 113 (244)
T 2y88_A 106 ALENPQWC 113 (244)
T ss_dssp HHHCHHHH
T ss_pred HhhChHHH
Confidence 99999875
No 83
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.46 E-value=3.6e-07 Score=80.25 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=62.2
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|+++|+++..+..+.+. +.. +.+.++++. .++||+.+|+|.|+++++.+++.|||+|++|+.
T Consensus 38 a~~~~~~Gad~i~v~~~d~~~~~~---------~~~-~~i~~i~~~-~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 38 ALAWQRSGAEWLHLVDLDAAFGTG---------DNR-ALIAEVAQA-MDIKVELSGGIRDDDTLAAALATGCTRVNLGTA 106 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHTSC---------CCH-HHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEecCchhhcCC---------ChH-HHHHHHHHh-cCCcEEEECCcCCHHHHHHHHHcCCCEEEECch
Confidence 456788999999999765433221 112 556677665 589999999999999999999999999999999
Q ss_pred hhhCCccc
Q 023442 145 AYQNPWYT 152 (282)
Q Consensus 145 al~nP~if 152 (282)
++.||+.+
T Consensus 107 ~l~~p~~~ 114 (244)
T 1vzw_A 107 ALETPEWV 114 (244)
T ss_dssp HHHCHHHH
T ss_pred HhhCHHHH
Confidence 99999875
No 84
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.41 E-value=2.4e-07 Score=90.61 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEe------cCCcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH------~Rt~~~~G~~~ad~~~i 96 (282)
++..+.++++++++.. ++||.++-= .+.++ ++.+.++|+|+|.|- ..++...|.+.
T Consensus 280 ~~~~v~~~i~~i~~~~~~~~vi~g~v------~t~e~-----a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~------ 342 (511)
T 3usb_A 280 HSQGVIDKVKEVRAKYPSLNIIAGNV------ATAEA-----TKALIEAGANVVKVGIGPGSICTTRVVAGVGV------ 342 (511)
T ss_dssp TSHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH-----HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCC------
T ss_pred chhhhhhHHHHHHHhCCCceEEeeee------ccHHH-----HHHHHHhCCCEEEECCCCccccccccccCCCC------
Confidence 4566778888888876 478887631 12222 345678999999982 22222223211
Q ss_pred CCccHHHHHHH---HhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 97 PPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 97 ~~~~~~~i~~l---~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
| .+..+.++ +++ .++|||++|||.+++|+.+++..|||+||+||.++.-.
T Consensus 343 p--~~~~l~~v~~~~~~-~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~ 395 (511)
T 3usb_A 343 P--QLTAVYDCATEARK-HGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVA 395 (511)
T ss_dssp C--HHHHHHHHHHHHHT-TTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred C--cHHHHHHHHHHHHh-CCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCc
Confidence 1 24554444 333 37999999999999999999999999999999875544
No 85
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.38 E-value=3.6e-06 Score=75.11 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=70.3
Q ss_pred HHHHHHHHhhcCCccEEEEec-CCCC--CCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 28 VGEAMSVIAANTNVPVSVKCR-IGVD--DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 28 ~~eiv~~v~~~~~ipvsvKiR-~G~d--~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.++++..++ .++|+.+.+- .|++ ...+..+ ...+++.++++|+|.|.+|.. ..++.+
T Consensus 134 ~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~~~-~~~~a~~a~~~Gad~i~~~~~-----------------~~~~~l 194 (273)
T 2qjg_A 134 LGMIAETCEY-WGMPLIAMMYPRGKHIQNERDPEL-VAHAARLGAELGADIVKTSYT-----------------GDIDSF 194 (273)
T ss_dssp HHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCHHH-HHHHHHHHHHTTCSEEEECCC-----------------SSHHHH
T ss_pred HHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCHhH-HHHHHHHHHHcCCCEEEECCC-----------------CCHHHH
Confidence 3344444332 4788888752 1221 0011222 223445678999999999830 137888
Q ss_pred HHHHhcCCCceEEEccCCCC--HHHHHH----HHHcCCCEEEecHHhhhCCccc
Q 023442 105 YALLRDFPDLTFTLNGGINT--VDEVNA----ALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s--~eda~~----~l~~g~DgVmIGRgal~nP~if 152 (282)
.++++. .++||+++|||.+ .+|+.+ +++.||+||++||+++.+|+.+
T Consensus 195 ~~i~~~-~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~ 247 (273)
T 2qjg_A 195 RDVVKG-CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVV 247 (273)
T ss_dssp HHHHHH-CSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHH
T ss_pred HHHHHh-CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHH
Confidence 888765 4899999999994 888555 4458999999999999999974
No 86
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.36 E-value=9e-07 Score=77.15 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=61.8
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|++.|++|..+....+ .+..++.+.++++. .++||+++|+|.++++++++++.|||+|++|+.
T Consensus 39 a~~~~~~G~d~i~v~~~~~~~~~---------~~~~~~~i~~i~~~-~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 39 AVRYEEEGADEIAILDITAAPEG---------RATFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp HHHHHHTTCSCEEEEECCCCTTT---------HHHHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHcCCCEEEEEeCCccccC---------CcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 45678999999999965432111 11235667777765 489999999999999999999999999999999
Q ss_pred hhhCCccc
Q 023442 145 AYQNPWYT 152 (282)
Q Consensus 145 al~nP~if 152 (282)
++.+|+++
T Consensus 109 ~~~~~~~~ 116 (253)
T 1h5y_A 109 AVRNPQLV 116 (253)
T ss_dssp HHHCTHHH
T ss_pred HhhCcHHH
Confidence 99999975
No 87
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.35 E-value=9.7e-07 Score=82.34 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC------cccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK------ALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt------~~~~G~~~ad~~~i 96 (282)
++..+.+.++.+++.+ ++||.+|.=. +.++ ++.+.++|+|.|.|.... +...|. .+
T Consensus 144 ~~~~~~~~i~~lr~~~~~~~vi~g~v~------t~e~-----A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~------~~ 206 (351)
T 2c6q_A 144 YSEHFVEFVKDVRKRFPQHTIMAGNVV------TGEM-----VEELILSGADIIKVGIGPGSVCTTRKKTGV------GY 206 (351)
T ss_dssp TBHHHHHHHHHHHHHCTTSEEEEEEEC------SHHH-----HHHHHHTTCSEEEECSSCSTTBCHHHHHCB------CC
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEEeCC------CHHH-----HHHHHHhCCCEEEECCCCCcCcCccccCCC------Cc
Confidence 4667788899999988 8999887421 2222 235678999999884211 111111 11
Q ss_pred CCccHHHHHHH---HhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 97 PPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 97 ~~~~~~~i~~l---~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
|. ...+.++ ++. .++|||+.|||.|..|+.+++..|||+||+||.++.-+
T Consensus 207 p~--~~~l~~v~~~~~~-~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 207 PQ--LSAVMECADAAHG-LKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHS 259 (351)
T ss_dssp CH--HHHHHHHHHHHHH-TTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred cH--HHHHHHHHHHHhh-cCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCc
Confidence 21 3333333 333 37999999999999999999999999999999998643
No 88
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.32 E-value=9.7e-06 Score=72.18 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=58.6
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.+++.|++.+..++.. -|.+ . .-.+++.+..+++. +++|||+.|||.|++|+.++++.|||||++|.+
T Consensus 149 akrl~~~G~~aVmPlg~p---IGsG----~--Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGL---IGSG----L--GICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp HHHHHHSCCSEEEECSSS---TTCC----C--CCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHhCCCEEEeCCcc---CCCC----C--CcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 556778899888887753 1211 0 11247888777774 689999999999999999999999999999998
Q ss_pred hhh--CCcc
Q 023442 145 AYQ--NPWY 151 (282)
Q Consensus 145 al~--nP~i 151 (282)
+.. ||-.
T Consensus 219 I~~a~dP~~ 227 (265)
T 1wv2_A 219 IAHAKDPVM 227 (265)
T ss_dssp HHTSSSHHH
T ss_pred HhCCCCHHH
Confidence 853 4543
No 89
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.32 E-value=6.2e-06 Score=77.39 Aligned_cols=107 Identities=7% Similarity=0.028 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.+++.|+++|. +.. ++-+|+
T Consensus 173 ~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~~~~~ 231 (384)
T 2pgw_A 173 GEKLDLEITAAVRGEIGDARLRLDANEGWSV----HDAIN-MCRKLEKYDIEFIE--------QPT--------VSWSIP 231 (384)
T ss_dssp CHHHHHHHHHHHHTTSTTCEEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEE--------CCS--------CTTCHH
T ss_pred CHHHHHHHHHHHHHHcCCcEEEEecCCCCCH----HHHHH-HHHHHHhcCCCEEe--------CCC--------ChhhHH
Confidence 7899999999999998 68999999888854 34344 45678899999885 111 222477
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
...++.+. .++||+++|.+.|+++++++++ ..||+|++..+.++.++-+
T Consensus 232 ~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 281 (384)
T 2pgw_A 232 AMAHVREK-VGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPM 281 (384)
T ss_dssp HHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHH
Confidence 77788765 5899999999999999999999 7799999999999998864
No 90
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.31 E-value=4.8e-06 Score=75.93 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=41.3
Q ss_pred HHHHHHHHhcCCCceEE--EccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 101 YEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi--~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
++.+.++.+. .++||+ +.|||.|++|+.++++.|||+|++|++++..+.
T Consensus 196 ~~ll~~i~~~-~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~d 246 (297)
T 4adt_A 196 IDLILLTRKL-KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHHHHHH-TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSC
T ss_pred HHHHHHHHHh-cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCC
Confidence 6666666665 467776 999999999999999999999999999997554
No 91
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.27 E-value=4.9e-06 Score=71.00 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=61.5
Q ss_pred HHHhCCCCEEEEecC--CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 67 VSSLSPTRHFIIHSR--KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 67 ~le~~Gv~~i~VH~R--t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
.+...|+..+.+++. ++..+|. .++.+.++.+. .++|||+.|++.+++++.++++.|+|+|++|++
T Consensus 138 ~~~~~~~~~vli~~~~~~g~~~g~-----------~~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a 205 (237)
T 3cwo_X 138 EVEKRGAGEILLTSIDRDGTKSGY-----------DTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASV 205 (237)
T ss_dssp HHHHHTCSEEEEEETTTTTCCSCC-----------CHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHhhcCCCeEEEEecCCCCccccc-----------cHHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHH
Confidence 345678888888874 3333332 25667676554 589999999999999999999999999999999
Q ss_pred hhhCCccchhhhHh
Q 023442 145 AYQNPWYTLGHVDT 158 (282)
Q Consensus 145 al~nP~if~~~~~~ 158 (282)
++.+||.| .++.+
T Consensus 206 ~~~~~~~~-~~~~~ 218 (237)
T 3cwo_X 206 FHFREIDV-RELKE 218 (237)
T ss_dssp HHTTSSCH-HHHHH
T ss_pred HHcCCCCH-HHHHH
Confidence 99999985 55544
No 92
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.24 E-value=5.9e-06 Score=74.83 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=41.6
Q ss_pred cHHHHHHHHhcCCCceEE--EccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 100 KYEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi--~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
.++.+.++++. .++||+ +.|||.|++|+.++++.|||+|++|++++..+
T Consensus 195 ~~~~i~~l~~~-~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~ 245 (297)
T 2zbt_A 195 PFELVKWVHDH-GRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSG 245 (297)
T ss_dssp CHHHHHHHHHH-SSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSS
T ss_pred hHHHHHHHHHh-cCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCC
Confidence 46667777664 478988 99999999999999999999999999999543
No 93
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.13 E-value=2.9e-05 Score=69.86 Aligned_cols=104 Identities=10% Similarity=0.138 Sum_probs=74.0
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+++.+.++++..++ .++.+.+-+ .+.+++. +. .+.|++.|-+.+|+..... ++++.
T Consensus 147 ~~~~l~~l~~~a~~-lGl~~lvev-------~t~ee~~----~A-~~~Gad~IGv~~r~l~~~~-----------~dl~~ 202 (272)
T 3qja_A 147 EQSVLVSMLDRTES-LGMTALVEV-------HTEQEAD----RA-LKAGAKVIGVNARDLMTLD-----------VDRDC 202 (272)
T ss_dssp CHHHHHHHHHHHHH-TTCEEEEEE-------SSHHHHH----HH-HHHTCSEEEEESBCTTTCC-----------BCTTH
T ss_pred CHHHHHHHHHHHHH-CCCcEEEEc-------CCHHHHH----HH-HHCCCCEEEECCCcccccc-----------cCHHH
Confidence 45667777777655 476665544 2334432 22 3579999999987531111 12455
Q ss_pred HHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 104 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 104 i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+.++++..+ ++||++.|||.|++|+.++.+.|+|||.||++++..+..
T Consensus 203 ~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~dp 251 (272)
T 3qja_A 203 FARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDP 251 (272)
T ss_dssp HHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCH
T ss_pred HHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCH
Confidence 566766554 799999999999999999999999999999999987775
No 94
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.11 E-value=3.6e-06 Score=74.62 Aligned_cols=78 Identities=10% Similarity=0.009 Sum_probs=59.4
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.++++|++.|.++..+....+. ...++.+.++.+. .++||+.+|+|.+.+++.++++.|||+|++|+.
T Consensus 36 a~~~~~~Ga~~i~v~d~~~~~~~~---------g~~~~~i~~i~~~-~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 36 VVEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp HHHHHHHTCSEEEEEETTTSSCSS---------CCCHHHHHHHGGG-CCSCEEEESCCCSTHHHHHHHHHTCSEEECCCC
T ss_pred HHHHHHCCCCEEEEEecCcccCCC---------cccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHH
Confidence 456678999999998654321111 1137777777665 589999999999999999999999999999999
Q ss_pred hh-h--CCccc
Q 023442 145 AY-Q--NPWYT 152 (282)
Q Consensus 145 al-~--nP~if 152 (282)
++ . +|..+
T Consensus 106 ~~~~~~~~~~~ 116 (266)
T 2w6r_A 106 FHFREIDMREL 116 (266)
T ss_dssp C------CHHH
T ss_pred HHhCCCCHHHH
Confidence 99 5 88875
No 95
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.06 E-value=1.6e-05 Score=74.84 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+++.+.++++.+++. ++|+.++++. . ...+. ++.+.++|++.+.+|++... ++... +...|+.
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~--~---~~~e~----a~~~~~agad~i~i~~~~~~-~~~~~------~~~~~~~ 202 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP--Q---NVREI----APIVIKAGADLLVIQGTLIS-AEHVN------TGGEALN 202 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT--T---THHHH----HHHHHHTTCSEEEEECSSCC-SSCCC------C-----C
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC--c---cHHHH----HHHHHHCCCCEEEEeCCccc-cccCC------CcccHHH
Confidence 889999999999886 8999998864 1 12232 23456789999999976521 11100 1113566
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRga 145 (282)
+.++++. .++||++ |+|.|+++++.+++.|||+|++|+|.
T Consensus 203 i~~l~~~-~~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 203 LKEFIGS-LDVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHH-CSSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHHh-cCCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc
Confidence 6667665 4899998 99999999999999999999998854
No 96
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.05 E-value=2.3e-05 Score=84.11 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcC---CcCCCCCc
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA---ENRTIPPL 99 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~a---d~~~i~~~ 99 (282)
+++.+.++++.+++.. ++||.||.=.+. ...+ .++.+.++|+|.|+|.|..... |.++. ++-.+|.
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~----gi~~----~A~~a~~AGAD~IvVsG~eGGT-gasp~~~~~~~G~Pt- 1045 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRS----GIGT----IAAGVAKANADIILISGNSGGT-GASPQTSIKFAGLPW- 1045 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCT----THHH----HHHHHHHTTCSEEEEECTTCCC-SSEETTHHHHSCCCH-
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCC----ChHH----HHHHHHHcCCcEEEEcCCCCCC-CCCchhhhcCCchhH-
Confidence 3567889999999988 899999985432 1122 2345678999999997643110 10110 0011221
Q ss_pred cHHHHHHHHh---cC---CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 100 KYEYYYALLR---DF---PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 100 ~~~~i~~l~~---~~---~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
...+.++.+ .. .++|||+.|||.|..|+.+++..|||+|++||++|.
T Consensus 1046 -~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1046 -EMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp -HHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred -HHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 122333322 11 379999999999999999999999999999999976
No 97
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.04 E-value=0.00011 Score=66.19 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+++.+.++++..++ .+..+.|-+. +.+|+ . .+.+.|++.|-+..|+-. .. .++++.
T Consensus 154 ~~~~l~~l~~~a~~-lGl~~lvevh-------~~eEl----~-~A~~~ga~iIGinnr~l~--t~---------~~dl~~ 209 (272)
T 3tsm_A 154 DDDLAKELEDTAFA-LGMDALIEVH-------DEAEM----E-RALKLSSRLLGVNNRNLR--SF---------EVNLAV 209 (272)
T ss_dssp CHHHHHHHHHHHHH-TTCEEEEEEC-------SHHHH----H-HHTTSCCSEEEEECBCTT--TC---------CBCTHH
T ss_pred CHHHHHHHHHHHHH-cCCeEEEEeC-------CHHHH----H-HHHhcCCCEEEECCCCCc--cC---------CCChHH
Confidence 45667777777655 3666655542 33443 2 234789999999887521 11 123566
Q ss_pred HHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhC
Q 023442 104 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 162 (282)
Q Consensus 104 i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g 162 (282)
..++++..+ ++|+|+-|||.|++|+.++.+.|+|||.||.+++..+++ ...+++...|
T Consensus 210 ~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~-~~~~~~l~~g 268 (272)
T 3tsm_A 210 SERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDV-AAATRALLTG 268 (272)
T ss_dssp HHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCH-HHHHHHHHHC
T ss_pred HHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCH-HHHHHHHHhc
Confidence 667776655 699999999999999999999999999999999999986 3444444444
No 98
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.03 E-value=2.3e-05 Score=73.19 Aligned_cols=107 Identities=10% Similarity=-0.006 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.+++.|+++|. +.. ++-+|
T Consensus 173 ~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~~d~ 231 (371)
T 2ovl_A 173 DLKEDVDRVSALREHLGDSFPLMVDANMKWTV----DGAIR-AARALAPFDLHWIE--------EPT--------IPDDL 231 (371)
T ss_dssp SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE--------CCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CCC--------CcccH
Confidence 6788889999999987 68999999988864 34344 35678899999873 111 22247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
+...++.+. .++||++++.+.|+++++++++ ..||.|++..+-++.++-+
T Consensus 232 ~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 282 (371)
T 2ovl_A 232 VGNARIVRE-SGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTF 282 (371)
T ss_dssp HHHHHHHHH-HCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHH
T ss_pred HHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHH
Confidence 777777765 4799999999999999999998 7899999987777776643
No 99
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.00 E-value=1.4e-05 Score=77.24 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC------CcccCCCCcCCcCCC
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR------KALLNGISPAENRTI 96 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R------t~~~~G~~~ad~~~i 96 (282)
+.+...+.++.+++.+ ++|+..+- .. +. +. ++.+.++|++.|.|... ++...|.. .
T Consensus 257 ~~~~~~~~i~~l~~~~p~~pvi~G~---v~---t~-~~----a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~------~ 319 (491)
T 1zfj_A 257 HSAGVLRKIAEIRAHFPNRTLIAGN---IA---TA-EG----ARALYDAGVDVVKVGIGPGSICTTRVVAGVG------V 319 (491)
T ss_dssp TCHHHHHHHHHHHHHCSSSCEEEEE---EC---SH-HH----HHHHHHTTCSEEEECSSCCTTBCHHHHTCCC------C
T ss_pred cchhHHHHHHHHHHHCCCCcEeCCC---cc---CH-HH----HHHHHHcCCCEEEECccCCcceEEeeecCCC------C
Confidence 4455667788888887 78887441 11 12 21 22456899999988411 11222211 1
Q ss_pred CCccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 97 PPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 97 ~~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
| ..+.+.++... ..++|||+.|||.+.+|+.+++..|||+||+||+++..+..
T Consensus 320 p--~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~ 374 (491)
T 1zfj_A 320 P--QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEA 374 (491)
T ss_dssp C--HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSC
T ss_pred C--cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcC
Confidence 1 24555444431 14799999999999999999999999999999999976654
No 100
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.99 E-value=1.8e-05 Score=85.11 Aligned_cols=116 Identities=17% Similarity=0.096 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcC---CcCCCCC
Q 023442 23 LDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA---ENRTIPP 98 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~a---d~~~i~~ 98 (282)
.+++-+.++++.+++.. ++||.||.=.+. ...+ .++.+.++|+|.|+|.+...- .|.++. ++-.+|.
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~----gi~~----~A~~a~kAGAD~IvVsG~eGG-Tgasp~~~~~~~GlPt 1080 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEI----GIGT----IAAGVAKANADIIQISGHDGG-TGASPLSSIKHAGSPW 1080 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECST----THHH----HHHHHHHTTCSEEEEECTTCC-CSSEEHHHHHHBCCCH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCC----ChHH----HHHHHHHcCCCEEEEeCCCCc-cCCCcchhhcCCchhH
Confidence 34677889999999988 899999985431 1122 234567899999999765321 010110 0011221
Q ss_pred ccHHHHHHH---HhcC---CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 99 LKYEYYYAL---LRDF---PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 99 ~~~~~i~~l---~~~~---~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
...+.++ .... .++|||+.|||.|..|+.+++..|||+|++||++|.-.
T Consensus 1081 --~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1081 --ELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp --HHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHT
T ss_pred --HHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHH
Confidence 1223232 2211 26999999999999999999999999999999997644
No 101
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.97 E-value=2e-05 Score=68.04 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=54.7
Q ss_pred HHhCCCCEEEEecC--CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 68 SSLSPTRHFIIHSR--KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 68 le~~Gv~~i~VH~R--t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRga 145 (282)
+.+.|+|+|.+..- +....|. ++..|+.+.++.+.. ++||++.||| |++++.++++.|+|+|++|+++
T Consensus 126 a~~~gaD~i~~~~~f~~~~~~g~--------~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i 195 (221)
T 1yad_A 126 AEKEDADYVLFGHVFETDCKKGL--------EGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGI 195 (221)
T ss_dssp HHHTTCSEEEEECCC------------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEESHHH
T ss_pred HHhCCCCEEEECCccccCCCCCC--------CCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHh
Confidence 45789999988753 1111111 244588888877654 8999999999 9999999999999999999999
Q ss_pred hhCCc
Q 023442 146 YQNPW 150 (282)
Q Consensus 146 l~nP~ 150 (282)
+.++.
T Consensus 196 ~~~~d 200 (221)
T 1yad_A 196 FSSAE 200 (221)
T ss_dssp HTSSS
T ss_pred hCCCC
Confidence 88766
No 102
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.95 E-value=1.6e-05 Score=77.38 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhhcC-C-ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-------ccCCCCcCCcCC
Q 023442 25 PKFVGEAMSVIAANT-N-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-------LLNGISPAENRT 95 (282)
Q Consensus 25 p~~~~eiv~~v~~~~-~-ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-------~~~G~~~ad~~~ 95 (282)
+..+.+.++.+++.. + +||.++.-. +.+. ++.+.++|++.+.| +... ...|. .
T Consensus 267 ~~~~~~~i~~lk~~~~~~~~Vi~G~V~------t~~~-----a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~------g 328 (503)
T 1me8_A 267 SEWQKITIGWIREKYGDKVKVGAGNIV------DGEG-----FRYLADAGADFIKI-GIGGGSICITREQKGI------G 328 (503)
T ss_dssp SHHHHHHHHHHHHHHGGGSCEEEEEEC------SHHH-----HHHHHHHTCSEEEE-CSSCSTTCCSTTTTCC------C
T ss_pred ccchhhHHHHHHHhCCCCceEeecccc------CHHH-----HHHHHHhCCCeEEe-cccCCcCcccccccCC------C
Confidence 344555567676665 4 677765432 2221 22356789999998 4311 11111 1
Q ss_pred CCCccHHHHHHHHhcC--------CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 96 IPPLKYEYYYALLRDF--------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~--------~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
+| ....+.++.+.. .++|||+.|||.++.|+.+++..|||+||+|+.++.
T Consensus 329 ~p--~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~ 386 (503)
T 1me8_A 329 RG--QATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFAR 386 (503)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred Cc--hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 22 244444443221 169999999999999999999999999999998875
No 103
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=97.92 E-value=5.4e-05 Score=70.17 Aligned_cols=105 Identities=9% Similarity=-0.041 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.+++.|+++|. +.. ++-+|
T Consensus 171 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------~P~--------~~~~~ 229 (359)
T 1mdl_A 171 ALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDV----PAAIK-RSQALQQEGVTWIE--------EPT--------LQHDY 229 (359)
T ss_dssp SHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHHHHTCSCEE--------CCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHHHhCCCeEE--------CCC--------ChhhH
Confidence 6788889999999987 68999999988864 34344 35567889999873 111 22247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+...++.+. .++||++++.+.|+++++++++ ..||+|++-.+-++.++
T Consensus 230 ~~~~~l~~~-~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 278 (359)
T 1mdl_A 230 EGHQRIQSK-LNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVT 278 (359)
T ss_dssp HHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHH
T ss_pred HHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHH
Confidence 777777765 5899999999999999999999 77999999766655544
No 104
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=97.79 E-value=0.00026 Score=66.13 Aligned_cols=108 Identities=6% Similarity=-0.080 Sum_probs=82.0
Q ss_pred ccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 21 LMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
.+.+++...+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +.. ++
T Consensus 179 ~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------~P~--------~~ 237 (382)
T 1rvk_A 179 WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSR----TDALA-LGRGLEKLGFDWIE--------EPM--------DE 237 (382)
T ss_dssp TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCH----HHHHH-HHHHHHTTTCSEEE--------CCS--------CT
T ss_pred cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEe--------CCC--------Ch
Confidence 3458999999999999987 68999999888863 34444 35678899999874 111 22
Q ss_pred ccHHHHHHHHhcCCCceEEEccCCCC-HHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 99 LKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~nGdI~s-~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
-+|+...++.+. .++||++.+.+.| +++++++++ ..||.|++--+-.+...
T Consensus 238 ~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 290 (382)
T 1rvk_A 238 QSLSSYKWLSDN-LDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGIT 290 (382)
T ss_dssp TCHHHHHHHHHH-CSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred hhHHHHHHHHhh-CCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHH
Confidence 247777777765 5899999999999 999999999 67999998655554443
No 105
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.78 E-value=0.00017 Score=63.19 Aligned_cols=74 Identities=19% Similarity=0.164 Sum_probs=57.5
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
.+...+-.|...+-+.+ ++. . .+.+.+.++++...++||+..|||+|++++++++ .|||+|.+|.
T Consensus 145 ~a~~a~~~g~~~VYld~-sG~-~------------~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 145 YARVSELLQLPIFYLEY-SGV-L------------GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp HHHHHHHTTCSEEEEEC-TTS-C------------CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred HHHHHHHcCCCEEEecC-CCC-c------------CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 45555556777777666 321 1 1378888887753279999999999999999998 5999999999
Q ss_pred HhhhCCccc
Q 023442 144 AAYQNPWYT 152 (282)
Q Consensus 144 gal~nP~if 152 (282)
++..||.++
T Consensus 210 a~v~~p~~~ 218 (228)
T 3vzx_A 210 AVYEDFDRA 218 (228)
T ss_dssp HHHHCHHHH
T ss_pred HHhcCHHHH
Confidence 999999975
No 106
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=97.77 E-value=0.00017 Score=67.34 Aligned_cols=103 Identities=9% Similarity=-0.010 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.+++.|+ +|. +.. + +|
T Consensus 171 ~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i-~iE--------~P~--------~--~~ 226 (379)
T 2rdx_A 171 DWQSDIDRIRACLPLLEPGEKAMADANQGWRV----DNAIR-LARATRDLDY-ILE--------QPC--------R--SY 226 (379)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCH----HHHHH-HHHHTTTSCC-EEE--------CCS--------S--SH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhCCe-EEe--------CCc--------C--CH
Confidence 6788899999999988 58999999988864 34344 4566788898 763 111 1 37
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCcc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~i 151 (282)
+...++.+. .++||++++.++|+++++++++ ..||.|++-.+-++.++-
T Consensus 227 ~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 276 (379)
T 2rdx_A 227 EECQQVRRV-ADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSK 276 (379)
T ss_dssp HHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHH
T ss_pred HHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHH
Confidence 777777664 5899999999999999999998 779999998777666654
No 107
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.77 E-value=3.5e-05 Score=65.83 Aligned_cols=106 Identities=15% Similarity=0.142 Sum_probs=69.1
Q ss_pred HHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC-cccCCCCcCCcCCCCCccHHHH
Q 023442 26 KFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK-ALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 26 ~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt-~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.+.++++.+++. ++++.+-+. +. .+..+.+ +.+.+.|++.|.++... ....+ +..++.+
T Consensus 90 ~~~~~~~~~~~~~-g~~~~v~~~-~~---~t~~~~~----~~~~~~g~d~i~v~~g~~g~~~~----------~~~~~~i 150 (211)
T 3f4w_A 90 LTIQSCIRAAKEA-GKQVVVDMI-CV---DDLPARV----RLLEEAGADMLAVHTGTDQQAAG----------RKPIDDL 150 (211)
T ss_dssp HHHHHHHHHHHHH-TCEEEEECT-TC---SSHHHHH----HHHHHHTCCEEEEECCHHHHHTT----------CCSHHHH
T ss_pred hHHHHHHHHHHHc-CCeEEEEec-CC---CCHHHHH----HHHHHcCCCEEEEcCCCcccccC----------CCCHHHH
Confidence 4456666666654 555554322 11 1222222 23457899999888432 11111 1126777
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.++++..+++||++.|||+ ++++.++++.|||+|.+||+++..+..
T Consensus 151 ~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~ 196 (211)
T 3f4w_A 151 ITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHAADP 196 (211)
T ss_dssp HHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTCSSH
T ss_pred HHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCCCCH
Confidence 7777655689999999995 999999999999999999999877663
No 108
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.76 E-value=4.5e-05 Score=69.43 Aligned_cols=125 Identities=9% Similarity=0.041 Sum_probs=81.8
Q ss_pred ccccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 2 PSCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 2 lN~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
|+-||. +|+++..+ |..|....+.+..|-.++....+.++.|.-|..-.....+++.++. ++.++++|+|.|.+|+.
T Consensus 113 iEd~~~-~k~cgH~~-gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~r-a~ay~eAGAd~i~~e~~ 189 (295)
T 1xg4_A 113 IEDQVG-AKRSGHRP-NKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIER-AQAYVEAGAEMLFPEAI 189 (295)
T ss_dssp EECBCS-SCCCTTSS-SCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHH-HHHHHHTTCSEEEETTC
T ss_pred ECCCCC-CcccCCCC-CCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHH-HHHHHHcCCCEEEEeCC
Confidence 456663 45665544 5667766677666655555555678888888631111123455554 46788999999999986
Q ss_pred CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCC--CCHH-HHHHHHHcCCCEEEecHHhhh
Q 023442 82 KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI--NTVD-EVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 82 t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI--~s~e-da~~~l~~g~DgVmIGRgal~ 147 (282)
+. ++.+.++.+.. ++|+++|... .++. ...++-+.|++.|++|.+++.
T Consensus 190 ~~-----------------~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 190 TE-----------------LAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp CS-----------------HHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH
T ss_pred CC-----------------HHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH
Confidence 31 56667777664 7999998875 2332 334444589999999988763
No 109
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.76 E-value=3.5e-05 Score=69.50 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=48.2
Q ss_pred CccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC--Cccchhhh
Q 023442 98 PLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN--PWYTLGHV 156 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n--P~if~~~~ 156 (282)
+...+.++++++... ++||+..|||+|++|++++++.|||+|.+|.+++.| |.++ .++
T Consensus 211 ~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv-~e~ 271 (286)
T 3vk5_A 211 HVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSAL-AEI 271 (286)
T ss_dssp CCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHH-HHH
T ss_pred cCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHH-HHH
Confidence 445677777776532 799999999999999999999999999999999999 6653 443
No 110
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=97.71 E-value=0.0002 Score=67.14 Aligned_cols=104 Identities=9% Similarity=-0.069 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+++++|++++ ++++.|+.+-||+. .+..+ +++.+++.|+ +|. +. ++ +|
T Consensus 171 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i-~iE--------qP--------~~--~~ 226 (378)
T 3eez_A 171 DVERDIARIRDVEDIREPGEIVLYDVNRGWTR----QQALR-VMRATEDLHV-MFE--------QP--------GE--TL 226 (378)
T ss_dssp CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCH----HHHHH-HHHHTGGGTC-CEE--------CC--------SS--SH
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHH-HHHHhccCCe-EEe--------cC--------CC--CH
Confidence 6778888999999988 68999999999974 23233 4566778887 663 11 11 36
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
+...++.+. .++||++++.+.|++|++++++ .+||.|++-.+..+.++-+
T Consensus 227 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~ 277 (378)
T 3eez_A 227 DDIAAIRPL-HSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRA 277 (378)
T ss_dssp HHHHHTGGG-CCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHH
T ss_pred HHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHH
Confidence 766666554 5899999999999999999999 7799999999998888754
No 111
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.69 E-value=0.00032 Score=63.45 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=80.2
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
+|+.+-.+.+.+.+-+++|++.++-|+ +|+=+--. .-+-+++.. +.+++.++|+|+|-.+.... ..|.+..
T Consensus 149 ig~lk~g~~~~v~~eI~~V~~a~~~~~-lKVIlEt~-~Lt~eei~~-A~~ia~eaGADfVKTSTGf~-~~GAT~e----- 219 (288)
T 3oa3_A 149 YPWLSEKRYTDVFQDIRAVRLAAKDAI-LKVILETS-QLTADEIIA-GCVLSSLAGADYVKTSTGFN-GPGASIE----- 219 (288)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTTSE-EEEECCGG-GCCHHHHHH-HHHHHHHTTCSEEECCCSSS-SCCCCHH-----
T ss_pred hhhhcCCcHHHHHHHHHHHHHHhcCCC-ceEEEECC-CCCHHHHHH-HHHHHHHcCCCEEEcCCCCC-CCCCCHH-----
Confidence 466666788999999999999886663 67533111 112344443 56788899999997663210 1121111
Q ss_pred CCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 97 PPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 97 ~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
....+++.++. ..+++|.+.|||+|.+|+.++++.||+ |+..|+.++.
T Consensus 220 ---dv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g~~I~~ 270 (288)
T 3oa3_A 220 ---NVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKIVN 270 (288)
T ss_dssp ---HHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHHHH
T ss_pred ---HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhhHHHHHH
Confidence 24556666643 247999999999999999999999999 7777766653
No 112
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.69 E-value=8.4e-05 Score=63.30 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=56.0
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
+.+.|+|.|.+++.... +.. +. ..+..|+.+.++.+.. ++||++.|||. ++++.++++.|+|+|++|++++.
T Consensus 124 ~~~~g~d~i~~~~~~~~--~~~--~~--~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 124 AEKKGADYLGAGSVFPT--KTK--ED--ARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp HHHHTCSEEEEECSSCC--------C--CCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHT
T ss_pred HHhcCCCEEEEcCCccC--CCC--CC--CCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhC
Confidence 34679999998763211 100 00 1234588888877654 89999999998 99999998899999999999988
Q ss_pred CCcc
Q 023442 148 NPWY 151 (282)
Q Consensus 148 nP~i 151 (282)
.|+.
T Consensus 196 ~~d~ 199 (215)
T 1xi3_A 196 AEDV 199 (215)
T ss_dssp SSSH
T ss_pred CCCH
Confidence 7753
No 113
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=97.68 E-value=0.00029 Score=66.22 Aligned_cols=103 Identities=9% Similarity=0.076 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+++++|++++ ++++.|+..-||+. ++..+ +++.+++.|+++|. +.. ++-++
T Consensus 177 ~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~----~~A~~-~~~~l~~~~i~~iE--------qP~--------~~~d~ 235 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGADVEILVDANQSLGR----HDALA-MLRILDEAGCYWFE--------EPL--------SIDDI 235 (389)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH----HHHHH-HHHHHHHTTCSEEE--------SCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEECCCCcCH----HHHHH-HHHHHHhcCCCEEE--------CCC--------CcccH
Confidence 6888889999999987 68999999989974 23333 45678899999884 111 22247
Q ss_pred HHHHHHH-hcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhC
Q 023442 102 EYYYALL-RDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQN 148 (282)
Q Consensus 102 ~~i~~l~-~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~n 148 (282)
+...++. + ..++||++++.+.|++|++++++ ..||.|++--+-.+.
T Consensus 236 ~~~~~l~~~-~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (389)
T 3ozy_A 236 EGHRILRAQ-GTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGG 283 (389)
T ss_dssp HHHHHHHTT-CCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSC
T ss_pred HHHHHHHhc-CCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 7777776 5 46899999999999999999998 779999886544444
No 114
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.68 E-value=4.1e-05 Score=68.17 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCC----CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 101 YEYYYALLRDFP----DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 101 ~~~i~~l~~~~~----~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
++...++++..+ ++|+|+.|||.|++|+.++.+ |+|||.||++++..++.
T Consensus 192 l~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~ 245 (254)
T 1vc4_A 192 LETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDL 245 (254)
T ss_dssp TTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCH
T ss_pred HHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCH
Confidence 455555554433 689999999999999999999 99999999999999886
No 115
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=97.63 E-value=0.00026 Score=66.13 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.++ .|+ +|. +. ++ +|
T Consensus 172 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~-~~i-~iE--------qP--------~~--d~ 226 (378)
T 2qdd_A 172 DPAQDIARIEAISAGLPDGHRVTFDVNRAWTP----AIAVE-VLNSVR-ARD-WIE--------QP--------CQ--TL 226 (378)
T ss_dssp CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCH----HHHHH-HHTSCC-CCC-EEE--------CC--------SS--SH
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCH----HHHHH-HHHHhC-CCc-EEE--------cC--------CC--CH
Confidence 5788889999999987 68999999888863 33333 334455 676 552 11 11 47
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
+...++.+. .++||++++.+.|+++++++++ ..||.|++-.+.++.++-+
T Consensus 227 ~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 227 DQCAHVARR-VANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHH
Confidence 777777664 5899999999999999999998 7899999998888887753
No 116
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=97.63 E-value=0.00049 Score=63.93 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +.. ++-+|
T Consensus 170 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~~~~ 228 (370)
T 1nu5_A 170 TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDE----QTASI-WIPRLEEAGVELVE--------QPV--------PRANF 228 (370)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCH----HHHHH-HHHHHHHHTCCEEE--------CCS--------CTTCH
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCcceEe--------CCC--------CcccH
Confidence 4677788999999877 58899999888864 34344 35677889999874 111 22247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+...++.+. .++||++++.++|+++++++++ ..||.|++--+-.+.++
T Consensus 229 ~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 229 GALRRLTEQ-NGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp HHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHH
Confidence 777777765 5899999999999999999999 67999999766666554
No 117
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.61 E-value=0.0011 Score=59.06 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhhcC---CccEEEEecC-CCCCC--CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 25 PKFVGEAMSVIAANT---NVPVSVKCRI-GVDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 25 p~~~~eiv~~v~~~~---~ipvsvKiR~-G~d~~--~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
.+.+.+-++++++.+ ++||.+=..+ |.+-. .+.+++ ...++++.++|+|.|-+.. + +
T Consensus 120 ~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i-~~a~~~a~~~GAD~vkt~~-~----~----------- 182 (263)
T 1w8s_A 120 EWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIV-AYAARIALELGADAMKIKY-T----G----------- 182 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHH-HHHHHHHHHHTCSEEEEEC-C----S-----------
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHH-HHHHHHHHHcCCCEEEEcC-C----C-----------
Confidence 444555555555433 7887665443 11110 022333 3345677889999987772 1 1
Q ss_pred ccHHHHHHHHhcCCCceEEEccCCC--CHHHHHHHH----HcCCCEEEecHHhhhCCcc
Q 023442 99 LKYEYYYALLRDFPDLTFTLNGGIN--TVDEVNAAL----RKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~nGdI~--s~eda~~~l----~~g~DgVmIGRgal~nP~i 151 (282)
..+.++++++..+.+||++.|||. |.+++.+++ +.|++|+.+||.++..|..
T Consensus 183 -~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp 240 (263)
T 1w8s_A 183 -DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDA 240 (263)
T ss_dssp -SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTH
T ss_pred -CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCH
Confidence 145666666554334999999999 999999888 5899999999999988875
No 118
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.59 E-value=8.9e-05 Score=65.48 Aligned_cols=81 Identities=16% Similarity=0.276 Sum_probs=63.0
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.+.+.|++.+++--=+....|. +.+++.+.+++++ ..+|+...|||+|.+|++++++.|||-|.+|..
T Consensus 37 a~~~~~~gad~lhvvDld~a~~~~---------~~~~~~i~~i~~~-~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 37 FKEYEKAGAKELHLVDLTGAKDPS---------KRQFALIEKLAKE-VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp HHHHHHHTCCEEEEEEHHHHHCGG---------GCCHHHHHHHHHH-CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHCCCCEEEEEecCcccccc---------hhHHHHHHHHHHh-cCCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 456788999999885211111121 1237788888776 589999999999999999999999999999999
Q ss_pred hhhCCccchhhh
Q 023442 145 AYQNPWYTLGHV 156 (282)
Q Consensus 145 al~nP~if~~~~ 156 (282)
++.||.++ .++
T Consensus 107 a~~~p~li-~e~ 117 (243)
T 4gj1_A 107 AIKDATLC-LEI 117 (243)
T ss_dssp TTTCHHHH-HHH
T ss_pred cccCCchH-HHH
Confidence 99999975 443
No 119
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.58 E-value=0.00043 Score=61.28 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.+.++.+. .++||++.|||.|++++.++++.|||+|.+|.++..
T Consensus 190 ~~~i~~v~~~-~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 190 ESLIQEVKKV-TNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp HHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHhh-cCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 4566666654 589999999999999999999999999999988753
No 120
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=97.58 E-value=0.00027 Score=66.25 Aligned_cols=104 Identities=5% Similarity=-0.071 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++. .+++++|++++ ++++.++.+-||+. ++..+ +++.+++.|+++|. +.. ++-+|
T Consensus 191 ~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~~d~ 248 (388)
T 2nql_A 191 DDGP-AAEIANLRQVLGPQAKIAADMHWNQTP----ERALE-LIAEMQPFDPWFAE--------APV--------WTEDI 248 (388)
T ss_dssp TTCH-HHHHHHHHHHHCTTSEEEEECCSCSCH----HHHHH-HHHHHGGGCCSCEE--------CCS--------CTTCH
T ss_pred ChHH-HHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHhhcCCCEEE--------CCC--------ChhhH
Confidence 5677 89999999987 68999999888864 34444 35568899999873 111 22247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCcc
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~i 151 (282)
+...++.+. .++||++++.+.|+++++++++ ..||+|++-.+- +.++-
T Consensus 249 ~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~ 297 (388)
T 2nql_A 249 AGLEKVSKN-TDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITN 297 (388)
T ss_dssp HHHHHHHTS-CCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHH
T ss_pred HHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHH
Confidence 777777664 5899999999999999999998 679999998877 77664
No 121
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=97.57 E-value=0.00043 Score=64.33 Aligned_cols=106 Identities=8% Similarity=0.112 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHH-HHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLC-DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~-~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++...+++++|++++ ++++.++.+-||+. ++.. ++ ++.+++.|+++|. +. +++-+
T Consensus 167 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~~~-~~~l~~~~i~~iE--------qP--------~~~~d 225 (369)
T 2p8b_A 167 NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKN----SANTLTA-LRSLGHLNIDWIE--------QP--------VIADD 225 (369)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBS----HHHHHHH-HHTSTTSCCSCEE--------CC--------BCTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHHHH-HHHHHhCCCcEEE--------CC--------CCccc
Confidence 6788889999999987 68999999888864 2333 33 4567888888774 11 12224
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCcc
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~i 151 (282)
|+...++.+. .++||++++.++|+++++++++ ..||+|++-.+-++.++-
T Consensus 226 ~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 276 (369)
T 2p8b_A 226 IDAMAHIRSK-TDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYP 276 (369)
T ss_dssp HHHHHHHHHT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHH
Confidence 7777777765 5899999999999999999998 789999998887777654
No 122
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=97.57 E-value=0.00021 Score=67.11 Aligned_cols=103 Identities=6% Similarity=-0.003 Sum_probs=78.5
Q ss_pred ccccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
||+...++++...+++++|++++ ++++.++..-+|+. ++..++ ++.+++.|+++|. +.
T Consensus 174 ~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~----~~a~~~-~~~l~~~~i~~iE--------~P------- 233 (392)
T 2poz_A 174 RRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTT----DETIRF-CRKIGELDICFVE--------EP------- 233 (392)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHHH-HHHHGGGCEEEEE--------CC-------
T ss_pred cCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHHH-HHHHHhcCCCEEE--------CC-------
Confidence 55556678899999999999987 68999998877853 344443 5568888888764 11
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+++-+|+...++.+. .++||++.+.+.|+++++++++ ..||.|++
T Consensus 234 -~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 234 -CDPFDNGALKVISEQ-IPLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp -SCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred -CCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 122247777777765 5899999999999999999998 66998876
No 123
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.55 E-value=0.0002 Score=63.38 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=55.6
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
+.+.|+|+|.+.+-..... ... .++..++.+.++++.. .++||++-||| |++++.++++.|+|||.+|++++
T Consensus 151 A~~~GaDyI~vgpvf~T~t----K~~--~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~ 223 (243)
T 3o63_A 151 AAAGDADYFCVGPCWPTPT----KPG--RAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAIT 223 (243)
T ss_dssp HHHSSCSEEEECCSSCCCC-----------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHH
T ss_pred HhhCCCCEEEEcCccCCCC----CCC--cchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHh
Confidence 3468999999865321100 000 1244588888877642 48999999999 99999999999999999999998
Q ss_pred hCCcc
Q 023442 147 QNPWY 151 (282)
Q Consensus 147 ~nP~i 151 (282)
..+..
T Consensus 224 ~a~dp 228 (243)
T 3o63_A 224 SADDP 228 (243)
T ss_dssp TCSSH
T ss_pred CCCCH
Confidence 87764
No 124
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.55 E-value=0.00021 Score=61.47 Aligned_cols=73 Identities=16% Similarity=0.077 Sum_probs=53.1
Q ss_pred HHhCCCCEEEEec----CCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 68 SSLSPTRHFIIHS----RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 68 le~~Gv~~i~VH~----Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+.+.|+|.+.+.. .+. .| ...+..|+.+.++++...++||++.|||. ++++.++++.|+|+|.+|+
T Consensus 132 a~~~g~d~v~~~~v~~t~~~--~~-------~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 132 AEEDGADYVGLGPIYPTETK--KD-------TRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp HHHHTCSEEEECCSSCCCSS--SS-------CCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESH
T ss_pred HHhCCCCEEEECCCcCCCCC--CC-------CCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhH
Confidence 3467899988632 111 11 01234588888877653239999999998 9999999889999999999
Q ss_pred HhhhCCc
Q 023442 144 AAYQNPW 150 (282)
Q Consensus 144 gal~nP~ 150 (282)
+++..++
T Consensus 202 ~i~~~~d 208 (227)
T 2tps_A 202 AISQAED 208 (227)
T ss_dssp HHHTSSC
T ss_pred HhhcCCC
Confidence 9987654
No 125
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=97.51 E-value=0.00065 Score=63.95 Aligned_cols=107 Identities=4% Similarity=-0.109 Sum_probs=82.5
Q ss_pred CH-HHHHHHHHHHhhcC--CccEEEEecCCC--CCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 24 DP-KFVGEAMSVIAANT--NVPVSVKCRIGV--DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 24 ~p-~~~~eiv~~v~~~~--~ipvsvKiR~G~--d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
++ +...+++++|++++ ++++.++.+-|| +. ++..+ +++.+++.|+++|. +.. ++
T Consensus 174 ~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~ 232 (401)
T 2hzg_A 174 GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDV----EAAAA-RLPTLDAAGVLWLE--------EPF--------DA 232 (401)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCH----HHHHT-THHHHHHTTCSEEE--------CCS--------CT
T ss_pred CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CCC--------Cc
Confidence 44 77889999999987 689999999888 53 23333 34567899999873 111 12
Q ss_pred ccHHHHHHHHh-cCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 99 LKYEYYYALLR-DFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 99 ~~~~~i~~l~~-~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
-+|+...++.+ . .++||++++.+.|+++++++++ ..||.|++-.+.++.++-+
T Consensus 233 ~d~~~~~~l~~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 287 (401)
T 2hzg_A 233 GALAAHAALAGRG-ARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPA 287 (401)
T ss_dssp TCHHHHHHHHTTC-CSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHH
T ss_pred cCHHHHHHHHhhC-CCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHH
Confidence 24777777765 4 5899999999999999999998 7899999998888887653
No 126
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.50 E-value=0.00025 Score=63.31 Aligned_cols=49 Identities=14% Similarity=0.160 Sum_probs=41.8
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
++.+..+.+ ..++||++-|||.|++|+.++++.|||||.+|++++..+.
T Consensus 167 ~~~l~~i~~-~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~d 215 (264)
T 1xm3_A 167 PLNLSFIIE-QAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADD 215 (264)
T ss_dssp HHHHHHHHH-HCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred HHHHHHHHh-cCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCC
Confidence 566666665 4689999999999999999999999999999999875544
No 127
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=97.49 E-value=0.00037 Score=65.74 Aligned_cols=104 Identities=11% Similarity=0.034 Sum_probs=78.4
Q ss_pred ccccccc-CCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCC
Q 023442 16 CFGVSLM-LDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 92 (282)
Q Consensus 16 ~yGs~Ll-~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad 92 (282)
.||+... ++++...+++++|++++ ++++.++..-||+. ++.++ +++.+++.|+++|. +.
T Consensus 191 ~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~----~~ai~-~~~~l~~~~i~~iE--------~P----- 252 (410)
T 2gl5_A 191 NYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLLGT----NSAIQ-FAKAIEKYRIFLYE--------EP----- 252 (410)
T ss_dssp GGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHGGGCEEEEE--------CS-----
T ss_pred cccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCeEE--------CC-----
Confidence 3676654 57888999999999987 68999998877753 34444 34668888888764 11
Q ss_pred cCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 93 NRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+++-+|+...++.+. .++||++.+.+.|+++++++++ ..||.|++
T Consensus 253 ---~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 253 ---IHPLNSDNMQKVSRS-TTIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp ---SCSSCHHHHHHHHHH-CSSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred ---CChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 122247777777765 5899999999999999999998 66998876
No 128
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.49 E-value=0.00057 Score=60.01 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=77.2
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecC--CCC-CCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCc
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI--GVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAEN 93 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~--G~d-~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~ 93 (282)
+|+.+-.+.+.+.+-+.+|++.++ ...+|+=+ +.- +..+-+++. .+.+++.++|+|+|-.+.......|-+..
T Consensus 103 ig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~-~a~~ia~~aGADfVKTSTGf~~~~gAt~e-- 178 (231)
T 3ndo_A 103 VGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLA-DVCRVARDAGADFVKTSTGFHPSGGASVQ-- 178 (231)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHH-HHHHHHHHTTCSEEECCCSCCTTCSCCHH--
T ss_pred hHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHH-HHHHHHHHHCcCEEEcCCCCCCCCCCCHH--
Confidence 576666789999999999999884 23446532 211 001223433 35678889999999665321101221110
Q ss_pred CCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 94 RTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 94 ~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
....+++... .+++|-++|||+|.+|+.++++.||+ |+..|+.++.
T Consensus 179 ------dv~lm~~~v~--~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~g~~I~~ 226 (231)
T 3ndo_A 179 ------AVEIMARTVG--ERLGVKASGGIRTAEQAAAMLDAGATRLGLSGSRAVLD 226 (231)
T ss_dssp ------HHHHHHHHHT--TTSEEEEESSCCSHHHHHHHHHTTCSEEEESSHHHHHH
T ss_pred ------HHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHhcchhcccchHHHHHh
Confidence 1233444443 47999999999999999999999999 8887777654
No 129
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=97.48 E-value=0.0005 Score=65.62 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=80.2
Q ss_pred cCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
..+++...+++++||+++ ++++.++..-+|+. .+..+ +++.+++.|+.+|. +. +++-
T Consensus 183 ~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~----~~A~~-~~~~Le~~~i~~iE--------eP--------~~~~ 241 (433)
T 3rcy_A 183 MTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTT----AGAIR-LGQAIEPYSPLWYE--------EP--------VPPD 241 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH----HHHHH-HHHHHGGGCCSEEE--------CC--------SCTT
T ss_pred hhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCH----HHHHH-HHHHhhhcCCCEEE--------CC--------CChh
Confidence 346788889999999987 68899988877864 33333 45678899998884 11 1222
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+++...++.+. .++||++.+.+.|++|++++++ ..||.|++--+-.+...
T Consensus 242 ~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit 292 (433)
T 3rcy_A 242 NVGAMAQVARA-VRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIW 292 (433)
T ss_dssp CHHHHHHHHHH-SSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred hHHHHHHHHhc-cCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHH
Confidence 47777777765 5899999999999999999999 67999988766555443
No 130
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.46 E-value=0.00018 Score=63.61 Aligned_cols=56 Identities=20% Similarity=0.175 Sum_probs=47.7
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc-cchhhhH
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW-YTLGHVD 157 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~-if~~~~~ 157 (282)
..+.+.++++...++||+..|||+|+++++++++ |||+|.+|.++..+|. ++ ++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~-~~v~ 225 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFDRAL-KTVA 225 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHH-THHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHH-HHHH
Confidence 4778888876532899999999999999999999 9999999999999998 53 5443
No 131
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=97.44 E-value=0.00087 Score=62.90 Aligned_cols=104 Identities=6% Similarity=-0.045 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++...+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +. +++-+|+
T Consensus 177 ~~~~~e~v~avR~a~G~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP--------~~~~d~~ 235 (391)
T 2qgy_A 177 LSISIQFVEKVREIVGDELPLMLDLAVPEDL----DQTKS-FLKEVSSFNPYWIE--------EP--------VDGENIS 235 (391)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEECCCCSCH----HHHHH-HHHHHGGGCCSEEE--------CS--------SCTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCCCCCH----HHHHH-HHHHHHhcCCCeEe--------CC--------CChhhHH
Confidence 688899999999987 68999999888863 34444 35668899999874 11 1222477
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
...++.+. .++||++++.+.|+++++++++ ..||.|++-.+-++.++
T Consensus 236 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 283 (391)
T 2qgy_A 236 LLTEIKNT-FNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLI 283 (391)
T ss_dssp HHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHH
T ss_pred HHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHH
Confidence 77777765 5899999999999999999998 67999998765555554
No 132
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.38 E-value=0.0015 Score=58.26 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=76.3
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecC--CCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI--GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~--G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
+|+.+-.+.+.+.+-+.+|+++++ ...+|+=+ +.- +-+++. .+.+++.++|+|+|-.+.... ..|.+..
T Consensus 134 ig~lk~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L---t~eei~-~A~~ia~eaGADfVKTSTGf~-~~GAT~e--- 204 (260)
T 3r12_A 134 VGMLKAKEWEYVYEDIRSVVESVK-GKVVKVIIETCYL---DTEEKI-AACVISKLAGAHFVKTSTGFG-TGGATAE--- 204 (260)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGC---CHHHHH-HHHHHHHHTTCSEEECCCSSS-SCCCCHH---
T ss_pred hhhhccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCC---CHHHHH-HHHHHHHHhCcCEEEcCCCCC-CCCCCHH---
Confidence 566666789999999999998874 23346432 221 223443 356788899999997763211 1121110
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
....+++... ..++|-++|||+|.+|+.++++.||+ |+..|+.++.
T Consensus 205 -----dV~lm~~~vg--~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~g~~I~~ 252 (260)
T 3r12_A 205 -----DVHLMKWIVG--DEMGVKASGGIRTFEDAVKMIMYGADRIGTSSGVKIVQ 252 (260)
T ss_dssp -----HHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHHHH
T ss_pred -----HHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHcCCceeecchHHHHHH
Confidence 1233344443 47999999999999999999999999 7777777654
No 133
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.36 E-value=0.00055 Score=61.06 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=39.9
Q ss_pred HHHHHHHHhcCCC-ceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 101 YEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 101 ~~~i~~l~~~~~~-ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.+..+++..++ +|||.-|||.|++|+..+++.|||||++|.++..
T Consensus 165 ~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 165 RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 4556666652467 9999999999999999999999999999998864
No 134
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.33 E-value=0.00025 Score=62.44 Aligned_cols=52 Identities=19% Similarity=0.307 Sum_probs=45.7
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
..+.+.++++...++||+..|||+|+++++++++ |||+|.+|.++..+|.-+
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~~~~~ 228 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKGIDA 228 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHHCHHH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhCHHHH
Confidence 4778888877533899999999999999999999 999999999999998654
No 135
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.28 E-value=0.0029 Score=59.23 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=76.2
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+++++|++++ ++++.|+..-||+. .+..+ +++.+++.|+++|. +.. ++-++
T Consensus 176 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~----~~A~~-~~~~l~~~~i~~iE--------qP~--------~~~d~ 234 (383)
T 3i4k_A 176 DPAEDTRRVAELAREVGDRVSLRIDINARWDR----RTALH-YLPILAEAGVELFE--------QPT--------PADDL 234 (383)
T ss_dssp CHHHHHHHHHHHHHTTTTTSEEEEECTTCSCH----HHHHH-HHHHHHHTTCCEEE--------SCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CCC--------ChhhH
Confidence 6777788899999987 58899999888864 23333 45677889999885 111 22236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQ 147 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~ 147 (282)
+...++.+. .++||.+++.+.|++|+.++++ ..||.|++--+-.+
T Consensus 235 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~G 280 (383)
T 3i4k_A 235 ETLREITRR-TNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHG 280 (383)
T ss_dssp HHHHHHHHH-HCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTT
T ss_pred HHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccC
Confidence 667777665 4799999999999999999998 67999988644433
No 136
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.27 E-value=0.0012 Score=58.14 Aligned_cols=115 Identities=14% Similarity=0.122 Sum_probs=74.6
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecC--CCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI--GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~--G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
+|+.+..+.+.+.+-+++|++.++- ..+|+=+ |.- +-+++. .+.+++.++|+|+|-.+.... ..|.+..
T Consensus 118 ig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L---t~eei~-~a~~ia~~aGADfVKTSTGf~-~ggAt~~--- 188 (239)
T 3ngj_A 118 IGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYL---TNEEKV-EVCKRCVAAGAEYVKTSTGFG-THGATPE--- 188 (239)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGS---CHHHHH-HHHHHHHHHTCSEEECCCSSS-SCCCCHH---
T ss_pred hHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCC---CHHHHH-HHHHHHHHHCcCEEECCCCCC-CCCCCHH---
Confidence 4655567888899889999888752 2455422 221 223433 356777899999997763211 0122111
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
..+.+++... .+++|-++|||+|.+|+.++++.||+ |+..|+.++.
T Consensus 189 -----dv~lmr~~vg--~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~~~I~~ 236 (239)
T 3ngj_A 189 -----DVKLMKDTVG--DKALVKAAGGIRTFDDAMKMINNGASRIGASAGIAILN 236 (239)
T ss_dssp -----HHHHHHHHHG--GGSEEEEESSCCSHHHHHHHHHTTEEEEEESCHHHHHH
T ss_pred -----HHHHHHHhhC--CCceEEEeCCCCCHHHHHHHHHhcccceecccHHHHHh
Confidence 1233444443 47999999999999999999999999 6666666554
No 137
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=97.26 E-value=0.0014 Score=61.72 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=76.0
Q ss_pred ccccc--CCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCc
Q 023442 18 GVSLM--LDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAEN 93 (282)
Q Consensus 18 Gs~Ll--~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~ 93 (282)
|+++. ++++...+++++|++++ ++++.++..-+|+. ++..++ ++.+++.|+++|.- .
T Consensus 184 ~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~----~~a~~~-~~~l~~~~i~~iEe--------P------ 244 (410)
T 2qq6_A 184 WNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI----PSSIRF-ARAMEPFGLLWLEE--------P------ 244 (410)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHH-HHHHGGGCCSEEEC--------C------
T ss_pred CccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHHH-HHHHhhcCCCeEEC--------C------
Confidence 44444 47788899999999987 58899988777753 344443 56688999998751 1
Q ss_pred CCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 94 RTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 94 ~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+++-+|+...++.+. .++||++.+.+.|+++++++++ ..||.|++
T Consensus 245 --~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 245 --TPPENLDALAEVRRS-TSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp --SCTTCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred --CChhhHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 122237777777664 5899999999999999999998 66998876
No 138
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.26 E-value=0.00036 Score=61.42 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=45.4
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccc
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if 152 (282)
..+.+.++++...++||+..|||.|+++++++.+ |||+|.+|.++..||..+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~ 224 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKA 224 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHH
Confidence 4777877766433899999999999999999888 999999999999999875
No 139
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=97.26 E-value=0.0017 Score=60.91 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +. +++-+|
T Consensus 189 ~~~~~~e~v~avR~avg~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------~P--------~~~~~~ 247 (393)
T 2og9_A 189 DGALDIARVTAVRKHLGDAVPLMVDANQQWDR----PTAQR-MCRIFEPFNLVWIE--------EP--------LDAYDH 247 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCH----HHHHH-HHHHHGGGCCSCEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhhCCCEEE--------CC--------CCcccH
Confidence 5788889999999986 68999998878853 34444 34668889999874 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||++.+.+.|+++++++++ ..||.|++-
T Consensus 248 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 248 EGHAALALQ-FDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 777777765 5899999999999999999998 669988774
No 140
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=97.24 E-value=0.0025 Score=59.02 Aligned_cols=105 Identities=8% Similarity=-0.043 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHh--CCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~--~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+++...+++++|++++ ++++.++.+-||+. ++..+ +++.+++ .|+++|. +.. ++-
T Consensus 167 ~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~~~i~~iE--------qP~--------~~~ 225 (366)
T 1tkk_A 167 DIATDIARIQEIRKRVGSAVKLRLDANQGWRP----KEAVT-AIRKMEDAGLGIELVE--------QPV--------HKD 225 (366)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHHHTTCCEEEEE--------CCS--------CTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHH-HHHHHhhcCCCceEEE--------CCC--------Ccc
Confidence 6788889999999887 68999999888854 33334 3556788 7877773 111 222
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+|+...++.+. .++||++++.++|++++.++++ ..||.|++--.-.+.+.
T Consensus 226 d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 276 (366)
T 1tkk_A 226 DLAGLKKVTDA-TDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGIS 276 (366)
T ss_dssp CHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred cHHHHHHHHhh-CCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHH
Confidence 47777777765 4899999999999999999998 78999999765555544
No 141
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.21 E-value=0.0032 Score=55.91 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhC-CCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~-Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
+.+.+.++++..++ .+..+.|-+. +.+|+ . .+.+. |++.|-++.|.- .+.. ++++
T Consensus 135 ~~~~l~~l~~~a~~-lGl~~lvEv~-------~~eE~----~-~A~~l~g~~iIGinnr~l--~t~~---------~d~~ 190 (251)
T 1i4n_A 135 TAEQIKEIYEAAEE-LGMDSLVEVH-------SREDL----E-KVFSVIRPKIIGINTRDL--DTFE---------IKKN 190 (251)
T ss_dssp CHHHHHHHHHHHHT-TTCEEEEEEC-------SHHHH----H-HHHTTCCCSEEEEECBCT--TTCC---------BCTT
T ss_pred CHHHHHHHHHHHHH-cCCeEEEEeC-------CHHHH----H-HHHhcCCCCEEEEeCccc--ccCC---------CCHH
Confidence 34667777777665 4777777553 33443 2 23478 999999999852 2221 1244
Q ss_pred HHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 103 YYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 103 ~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
...++++..+ ++++|+-|||.|++|+.++.+. +|+|.||.+++..+..
T Consensus 191 ~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~~d~ 239 (251)
T 1i4n_A 191 VLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAENP 239 (251)
T ss_dssp HHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHCSSH
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCH
Confidence 4556666554 5899999999999999999999 9999999999998876
No 142
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.18 E-value=0.0024 Score=55.55 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=75.1
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecC--CCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI--GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~--G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
+|+..-.+.+.+.+-+.++++.++-+ .+|+=+ +.- +-+++ ....+++.++|+|+|-.+.... ..|.+..
T Consensus 94 ig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l---~~e~i-~~a~~ia~eaGADfVKTsTGf~-~~gat~~--- 164 (220)
T 1ub3_A 94 LGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYF---SPEEI-ARLAEAAIRGGADFLKTSTGFG-PRGASLE--- 164 (220)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGS---CHHHH-HHHHHHHHHHTCSEEECCCSSS-SCCCCHH---
T ss_pred chhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCC---CHHHH-HHHHHHHHHhCCCEEEeCCCCC-CCCCCHH---
Confidence 46555568888888889998887533 566322 221 22343 3467788899999996653210 0121110
Q ss_pred CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
..+.+.+.. ...+||-+.|||.|.+|+.++++.|++ |+..||.++.
T Consensus 165 -----dv~~m~~~v--g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 165 -----DVALLVRVA--QGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp -----HHHHHHHHH--TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred -----HHHHHHHhh--CCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 133344443 247999999999999999999999999 8888887653
No 143
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.17 E-value=0.0016 Score=61.53 Aligned_cols=97 Identities=14% Similarity=0.027 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++||+++ ++++.++..-||+. ++..+ +++.+++.|+++|.- .. ++-++
T Consensus 190 ~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~----~~A~~-~~~~l~~~~i~~iEe--------P~--------~~~~~ 248 (404)
T 4e5t_A 190 DLERSEAFCKQIRAAVGTKADLLFGTHGQFTV----SGAKR-LARRLEAYDPLWFEE--------PI--------PPEKP 248 (404)
T ss_dssp HHHHHHHHHHHHHHHHGGGSEEEECCCSCBCH----HHHHH-HHHHHGGGCCSEEEC--------CS--------CTTCH
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCH----HHHHH-HHHHHhhcCCcEEEC--------CC--------CcccH
Confidence 4677788999999987 68999998888864 33333 456788999998851 11 12236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||.+.+.+.|+++++++++ ..||.|++-
T Consensus 249 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 289 (404)
T 4e5t_A 249 EDMAEVARY-TSIPVATGERLCTKYEFSRVLETGAASILQMN 289 (404)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEecC
Confidence 767777665 5899999999999999999998 679988664
No 144
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.16 E-value=0.0013 Score=58.95 Aligned_cols=44 Identities=25% Similarity=0.277 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
+.+.++++ ..++||+..|||.|++++.+.+..|||||.+|.++.
T Consensus 198 ~~v~~vr~-~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 198 ALLERLQQ-FDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHH-TTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHH-hcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 45566654 458999999999999999988888999999998885
No 145
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.13 E-value=0.00043 Score=58.72 Aligned_cols=65 Identities=22% Similarity=0.309 Sum_probs=50.6
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
.+.|++.+.+|+... ...+.++++.+..+++||++.|||+ .+++.++++.|+|+|.+|++++.
T Consensus 121 ~~~Gad~vk~~~~~~---------------~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~- 183 (205)
T 1wa3_A 121 MKLGHTILKLFPGEV---------------VGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK- 183 (205)
T ss_dssp HHTTCCEEEETTHHH---------------HHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-
T ss_pred HHcCCCEEEEcCccc---------------cCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-
Confidence 468888887775321 1145666776655589999999995 89999999999999999999987
Q ss_pred Cc
Q 023442 149 PW 150 (282)
Q Consensus 149 P~ 150 (282)
+.
T Consensus 184 ~d 185 (205)
T 1wa3_A 184 GT 185 (205)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 146
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.12 E-value=0.0043 Score=58.34 Aligned_cols=99 Identities=8% Similarity=-0.016 Sum_probs=74.8
Q ss_pred cCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
..+++.-.+++++|++++ ++++.|+..-+|+. .+..+ +++.+++.|+++|. +. +++-
T Consensus 171 ~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE--------qP--------~~~~ 229 (393)
T 4dwd_A 171 DVDIPGDIAKARAVRELLGPDAVIGFDANNGYSV----GGAIR-VGRALEDLGYSWFE--------EP--------VQHY 229 (393)
T ss_dssp SCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCH----HHHHH-HHHHHHHTTCSEEE--------CC--------SCTT
T ss_pred ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHH-HHHHHHhhCCCEEE--------CC--------CCcc
Confidence 347888889999999986 68999999888864 23333 45678899999885 11 1222
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+++...++.+. .++||.+.+.+.+++|++++++.|||.|++-
T Consensus 230 d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k 271 (393)
T 4dwd_A 230 HVGAMGEVAQR-LDITVSAGEQTYTLQALKDLILSGVRMVQPD 271 (393)
T ss_dssp CHHHHHHHHHH-CSSEEEBCTTCCSHHHHHHHHHHTCCEECCC
T ss_pred cHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCEEEeC
Confidence 36777777665 5899999999999999999998339998764
No 147
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.11 E-value=0.0027 Score=61.93 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=49.7
Q ss_pred HHHhCCCCEEEEec------CCcccCCCCcCCcCCCCCccHHHHHHH---HhcCCCceEEEccCCCCHHHHHHHHHcCCC
Q 023442 67 VSSLSPTRHFIIHS------RKALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAH 137 (282)
Q Consensus 67 ~le~~Gv~~i~VH~------Rt~~~~G~~~ad~~~i~~~~~~~i~~l---~~~~~~ipVi~nGdI~s~eda~~~l~~g~D 137 (282)
.|.++|+|.+-|=- -|+...|..- |. ...+.++ +++ ..+|||+-|||.+.-|+.+++..|||
T Consensus 338 ~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~------PQ--~tAi~~~a~~a~~-~~vpvIADGGI~~sGDi~KAlaaGAd 408 (556)
T 4af0_A 338 QLIAAGADGLRIGMGSGSICITQEVMAVGR------PQ--GTAVYAVAEFASR-FGIPCIADGGIGNIGHIAKALALGAS 408 (556)
T ss_dssp HHHHHTCSEEEECSSCSTTBCCTTTCCSCC------CH--HHHHHHHHHHHGG-GTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEeecCCCCcccccccccCCCC------cH--HHHHHHHHHHHHH-cCCCEEecCCcCcchHHHHHhhcCCC
Confidence 34578999998841 2334445421 21 3444333 344 37999999999999999999999999
Q ss_pred EEEecHHh
Q 023442 138 HVMVGRAA 145 (282)
Q Consensus 138 gVmIGRga 145 (282)
+||+|.-+
T Consensus 409 ~VMlGsll 416 (556)
T 4af0_A 409 AVMMGGLL 416 (556)
T ss_dssp EEEESTTT
T ss_pred EEEEchhh
Confidence 99999644
No 148
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.09 E-value=0.00048 Score=58.81 Aligned_cols=64 Identities=17% Similarity=0.280 Sum_probs=49.4
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.|+|.|.++... +..++.+.++.+..+ ++||++.|||. .+++.++++.|+|+|.+|++++.
T Consensus 118 ~~~G~d~v~v~~t~---------------~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 118 LEAGAQALKIFPSS---------------AFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHTTCSEEEETTHH---------------HHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCC
T ss_pred HHCCCCEEEEecCC---------------CCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 46788888774310 112677777776544 59999999996 99999999999999999999876
Q ss_pred C
Q 023442 148 N 148 (282)
Q Consensus 148 n 148 (282)
.
T Consensus 182 ~ 182 (212)
T 2v82_A 182 A 182 (212)
T ss_dssp T
T ss_pred C
Confidence 5
No 149
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=97.08 E-value=0.0041 Score=58.29 Aligned_cols=99 Identities=8% Similarity=0.014 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +. +++-+|
T Consensus 171 ~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP--------~~~~~~ 229 (397)
T 2qde_A 171 PLKADIAMVAEVRRAVGDDVDLFIDINGAWTY----DQALT-TIRALEKYNLSKIE--------QP--------LPAWDL 229 (397)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCH----HHHHH-HHHHHGGGCCSCEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCH----HHHHH-HHHHHHhCCCCEEE--------CC--------CChhhH
Confidence 6677889999999886 68899998878853 34344 35678889998774 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHH
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRA 144 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRg 144 (282)
+...++.+. .++||++.+.+.|+++++++++ ..||.|++=-.
T Consensus 230 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 230 DGMARLRGK-VATPIYADESAQELHDLLAIINKGAADGLMIKTQ 272 (397)
T ss_dssp HHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecc
Confidence 777777664 5899999999999999999998 77999988533
No 150
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=97.07 E-value=0.0027 Score=60.17 Aligned_cols=101 Identities=7% Similarity=-0.054 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++||+++ ++++.|+..-||+. .+..+ +++.+++.|+++|.- . +++-++
T Consensus 212 ~~~~die~v~avReavG~d~~L~vDaN~~~~~----~~Ai~-~~~~Le~~~i~~iEe--------P--------~~~~d~ 270 (412)
T 3stp_A 212 GMRENLKRVEAVREVIGYDNDLMLECYMGWNL----DYAKR-MLPKLAPYEPRWLEE--------P--------VIADDV 270 (412)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEEC--------C--------SCTTCH
T ss_pred hHHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEEC--------C--------CCcccH
Confidence 4577888999999987 68999999888864 33333 456788999998841 1 122246
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
+...++.+. .++||.+.+.+.|+++++++++ ..||.|++--+-.
T Consensus 271 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~ 315 (412)
T 3stp_A 271 AGYAELNAM-NIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRV 315 (412)
T ss_dssp HHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHHhC-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhc
Confidence 777777765 6899999999999999999999 6799987654443
No 151
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=97.06 E-value=0.0017 Score=61.04 Aligned_cols=99 Identities=13% Similarity=0.003 Sum_probs=74.9
Q ss_pred cCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
.++++...+++++|++++ ++++.++..-+|+. ++..++ ++.+++.|+++|. +.. ++-
T Consensus 189 ~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~----~~ai~~-~~~l~~~~i~~iE--------~P~--------~~~ 247 (403)
T 2ox4_A 189 SETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL----VSAIQF-AKAIEEFNIFFYE--------EIN--------TPL 247 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHHH-HHHHGGGCEEEEE--------CCS--------CTT
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHHH-HHHHHhhCCCEEe--------CCC--------Chh
Confidence 356788889999999987 68999998877853 344443 5568888888763 111 222
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+|+...++.+. .++||++.+.+.|+++++++++ ..||.|++-
T Consensus 248 d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 290 (403)
T 2ox4_A 248 NPRLLKEAKKK-IDIPLASGERIYSRWGFLPFLEDRSIDVIQPD 290 (403)
T ss_dssp STHHHHHHHHT-CCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred hHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 36777777665 5899999999999999999998 679998774
No 152
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.04 E-value=0.0042 Score=57.76 Aligned_cols=97 Identities=7% Similarity=-0.014 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.++..-||+..+ . .+ +++.+++.|+++|. +. +++-++
T Consensus 170 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~-a---~~-~~~~l~~~~i~~iE--------qP--------~~~~~~ 228 (370)
T 1chr_A 170 SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQV-A---SV-YIPELEALGVELIE--------QP--------VGRENT 228 (370)
T ss_dssp CSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTH-H---HH-HTHHHHTTTEEEEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH-H---HH-HHHHHHhcCCCEEE--------CC--------CCcccH
Confidence 5666678888888887 4789999988887532 2 22 34567888887774 11 122236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||.+++.+.|.+|+.++++ ..||.|++-
T Consensus 229 ~~~~~l~~~-~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k 269 (370)
T 1chr_A 229 QALRRLSDN-NRVAIMADESLSTLASAFDLARDRSVDVFSLK 269 (370)
T ss_dssp HHHHHHHHH-SCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC
T ss_pred HHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 667777665 5899999999999999999998 679999874
No 153
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=97.04 E-value=0.0072 Score=56.53 Aligned_cols=96 Identities=7% Similarity=-0.105 Sum_probs=72.5
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHh--CCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~--~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+++...+++++|++++ ++++.++..-||+. ++..++ ++.+++ .++.+|. +. +++-
T Consensus 172 ~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~----~~a~~~-~~~l~~~g~~i~~iE--------qP--------~~~~ 230 (389)
T 2oz8_A 172 DFDRDLRRLELLKTCVPAGSKVMIDPNEAWTS----KEALTK-LVAIREAGHDLLWVE--------DP--------ILRH 230 (389)
T ss_dssp SHHHHHHHHHHHHTTSCTTCEEEEECTTCBCH----HHHHHH-HHHHHHTTCCCSEEE--------SC--------BCTT
T ss_pred CHHHHHHHHHHHHHhhCCCCeEEEECCCCCCH----HHHHHH-HHHHHhcCCCceEEe--------CC--------CCCc
Confidence 5678889999999988 68899998878853 344443 456788 6776653 11 1222
Q ss_pred cHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 100 KYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 100 ~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+|+...++.+. . ++||++.+.+ |+++++++++ ..||.|++.
T Consensus 231 ~~~~~~~l~~~-~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 231 DHDGLRTLRHA-VTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp CHHHHHHHHHH-CCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHhh-CCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 47777777765 5 7999999999 9999999998 679999998
No 154
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.03 E-value=0.004 Score=58.53 Aligned_cols=97 Identities=8% Similarity=-0.015 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. ++..++ ++.+++.|+++|. +.. ++-+|
T Consensus 202 ~~~~d~e~v~avR~avG~d~~l~vDan~~~~~----~~ai~~-~~~l~~~~i~~iE--------qP~--------~~~d~ 260 (398)
T 2pp0_A 202 NCAEDIRRLTAVREALGDEFPLMVDANQQWDR----ETAIRM-GRKMEQFNLIWIE--------EPL--------DAYDI 260 (398)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEECTTCSCH----HHHHHH-HHHHGGGTCSCEE--------CCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HHHHHH-HHHHHHcCCceee--------CCC--------ChhhH
Confidence 6788889999999986 68999998878853 344443 4567889998774 111 22247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||++.+.+.|+++++++++ ..||.|++-
T Consensus 261 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 261 EGHAQLAAA-LDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 777777765 4899999999999999999998 679988774
No 155
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.01 E-value=0.0011 Score=57.05 Aligned_cols=64 Identities=14% Similarity=0.070 Sum_probs=50.2
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.|+|.|.+|+-. . .| ..++++.+....+++||++.|||+ .+++.++++.|+|+|.+|++++.
T Consensus 121 ~~~Gad~v~~fpa~-~-~g------------G~~~lk~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 121 LALGLSALKFFPAE-P-FQ------------GVRVLRAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHTTCCEEEETTTT-T-TT------------HHHHHHHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHCCCCEEEEecCc-c-cc------------CHHHHHHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 47899999997611 0 10 146676776666689999999995 79999999999999999988776
No 156
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.01 E-value=0.0069 Score=55.11 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCccEEEEecC-C--CCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc---CC
Q 023442 39 TNVPVSVKCRI-G--VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD---FP 112 (282)
Q Consensus 39 ~~ipvsvKiR~-G--~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~---~~ 112 (282)
.++|+.+=+-. | ..+.....+.....++.+.+.|+|.+-+|.-.. +.. .++.+.++++. ..
T Consensus 154 ~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~---~~g----------~~~~~~~vv~~~~~~~ 220 (304)
T 1to3_A 154 NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLY---GKG----------ARSDLLTASQRLNGHI 220 (304)
T ss_dssp TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGG---GCS----------CHHHHHHHHHHHHHTC
T ss_pred cCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcC---CCC----------CHHHHHHHHHhccccC
Confidence 48898776521 1 211112212333446678899999999997321 111 15555555543 24
Q ss_pred Cce-EEEccCCCCHHH----HHHHHHcCCCEEEecHHhhhC
Q 023442 113 DLT-FTLNGGINTVDE----VNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 113 ~ip-Vi~nGdI~s~ed----a~~~l~~g~DgVmIGRgal~n 148 (282)
.+| |+..||+ +.++ +..+++.|++||.+||++...
T Consensus 221 ~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 221 NMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp CSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 789 9999999 6644 566666899999999999877
No 157
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=97.01 E-value=0.0049 Score=57.19 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHH-HhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~l-e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++...+++++|++++ ++++.++..-||+. ++..+ +++.+ ++.|+ +|. +.. + +
T Consensus 172 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~~i-~iE--------~P~--------~--~ 227 (371)
T 2ps2_A 172 EPVTDAKRITAALANQQPDEFFIVDANGKLSV----ETALR-LLRLLPHGLDF-ALE--------APC--------A--T 227 (371)
T ss_dssp CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCH----HHHHH-HHHHSCTTCCC-EEE--------CCB--------S--S
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCH----HHHHH-HHHHHHhhcCC-cCc--------CCc--------C--C
Confidence 5788889999999987 68999999888853 34344 35567 78888 663 100 1 3
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
|+...++.+. .++||++++.++|+++++++++ ..||.|++--+-++..+
T Consensus 228 ~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (371)
T 2ps2_A 228 WRECISLRRK-TDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLT 277 (371)
T ss_dssp HHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHH
Confidence 7777777664 5899999999999999999998 77999999776666654
No 158
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=96.99 E-value=0.0033 Score=58.59 Aligned_cols=98 Identities=11% Similarity=0.008 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++||+++ ++++.++..-||++ ..+..+ +++.+++.|+++|. +. +++-++
T Consensus 175 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d---~~~A~~-~~~~l~~~~i~~iE--------qP--------~~~~~~ 234 (374)
T 3sjn_A 175 DPDTDYAIVKAVREAAGPEMEVQIDLASKWHT---CGHSAM-MAKRLEEFNLNWIE--------EP--------VLADSL 234 (374)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTTTCS---HHHHHH-HHHHSGGGCCSEEE--------CS--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHHHHH-HHHHhhhcCceEEE--------CC--------CCcccH
Confidence 5788889999999986 68999999988973 223333 45677889998884 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||.+++.+.|++++.++++ ..||.|++-
T Consensus 235 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 275 (374)
T 3sjn_A 235 ISYEKLSRQ-VSQKIAGGESLTTRYEFQEFITKSNADIVQPD 275 (374)
T ss_dssp HHHHHHHHH-CSSEEEECTTCCHHHHHHHHHHHHCCSEECCB
T ss_pred HHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 777777665 5899999999999999999998 789988663
No 159
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=96.97 E-value=0.0032 Score=59.30 Aligned_cols=103 Identities=9% Similarity=0.015 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++...+++++|++++ ++++.++..-||+. .+..+ +++.+++.|+++|.= .. ++-+++
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l~vDan~~~~~----~~A~~-~~~~L~~~~i~~iEq--------P~--------~~~~~~ 242 (401)
T 3sbf_A 184 MDNTLTMFKSLREKYGNQFHILHDVHERLFP----NQAIQ-FAKEVEQYKPYFIED--------IL--------PPNQTE 242 (401)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSCEEC--------SS--------CTTCGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEEC--------CC--------ChhHHH
Confidence 567788999999987 68999999888864 23333 456788899888841 11 111245
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCC
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP 149 (282)
...++.+. .++||.+++.+.|+++++++++ ..||.|++--+-.+..
T Consensus 243 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi 289 (401)
T 3sbf_A 243 WLDNIRSQ-SSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIGGI 289 (401)
T ss_dssp GHHHHHTT-CCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSH
T ss_pred HHHHHHhh-CCCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccCCH
Confidence 55566554 6899999999999999999998 6799988765444443
No 160
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=96.97 E-value=0.0053 Score=56.76 Aligned_cols=104 Identities=3% Similarity=-0.069 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+++++|++++ ++++.++..-||+. ++..+ +++.+++.|+++|. +. +++-++
T Consensus 165 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~----~~a~~-~~~~L~~~~i~~iE--------qP--------~~~~d~ 223 (354)
T 3jva_A 165 GIEADIARVKAIREAVGFDIKLRLDANQAWTP----KDAVK-AIQALADYQIELVE--------QP--------VKRRDL 223 (354)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHH-HHHHTTTSCEEEEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CC--------CChhhH
Confidence 3455667778888766 57888888777753 23233 34566777777774 11 122246
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCC
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP 149 (282)
+...++.+. .++||.+.+.++|++|+.++++ ..||.|++--+-.+..
T Consensus 224 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGi 271 (354)
T 3jva_A 224 EGLKYVTSQ-VNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGI 271 (354)
T ss_dssp HHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHh-CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCH
Confidence 777777665 5899999999999999999998 7899999876555544
No 161
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.94 E-value=0.01 Score=51.29 Aligned_cols=106 Identities=19% Similarity=0.333 Sum_probs=66.2
Q ss_pred HHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhC--CCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHH
Q 023442 29 GEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLS--PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 106 (282)
Q Consensus 29 ~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~--Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~ 106 (282)
.++++.+++. ++.+.+-+....+ .+. + .. +.+. ++|++.+-+......|. ...+..++.+.+
T Consensus 103 ~~~~~~i~~~-g~~igv~~~p~t~----~e~-~---~~-~~~~~~~~d~vl~~sv~pg~~g~------~~~~~~l~~i~~ 166 (228)
T 1h1y_A 103 QELIQSIKAK-GMRPGVSLRPGTP----VEE-V---FP-LVEAENPVELVLVMTVEPGFGGQ------KFMPEMMEKVRA 166 (228)
T ss_dssp HHHHHHHHHT-TCEEEEEECTTSC----GGG-G---HH-HHHSSSCCSEEEEESSCTTCSSC------CCCGGGHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEEeCCCC----HHH-H---HH-HHhcCCCCCEEEEEeecCCCCcc------cCCHHHHHHHHH
Confidence 5666776654 5555544432221 111 1 11 2344 89999886543221221 122233555666
Q ss_pred HHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 107 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 107 l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+.+...++||++-|||+. +.+.++++.|+|+|.+|++++..|..
T Consensus 167 ~~~~~~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~~d~ 210 (228)
T 1h1y_A 167 LRKKYPSLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGAAEP 210 (228)
T ss_dssp HHHHCTTSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred HHHhcCCCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCH
Confidence 655434899999999976 89999988999999999999887763
No 162
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=96.94 E-value=0.0041 Score=58.45 Aligned_cols=97 Identities=10% Similarity=-0.077 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCC-CCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGV-DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~-d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++.-.+++++|++++ ++++.++..-|| +. .+..+ +++.+++.|+++|. +- +++-+
T Consensus 182 ~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~----~~A~~-~~~~L~~~~i~~iE--------eP--------~~~~~ 240 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGWDMDMMVDCLYRWTDW----QKARW-TFRQLEDIDLYFIE--------AC--------LQHDD 240 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCH----HHHHH-HHHHTGGGCCSEEE--------SC--------SCTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCH----HHHHH-HHHHHhhcCCeEEE--------CC--------CCccc
Confidence 5777788899999886 688999888888 43 23333 45677888988884 11 12223
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
++...++.+. .++||++.+.+.|+++++++++ ..||.|.+-
T Consensus 241 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 282 (394)
T 3mqt_A 241 LIGHQKLAAA-INTRLCGAEMSTTRFEAQEWLEKTGISVVQSD 282 (394)
T ss_dssp HHHHHHHHHH-SSSEEEECTTCCHHHHHHHHHHHHCCSEECCC
T ss_pred HHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCeEecC
Confidence 6667777665 5899999999999999999998 679988764
No 163
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=96.94 E-value=0.0031 Score=59.31 Aligned_cols=97 Identities=8% Similarity=-0.035 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
++++...+++++|++++ ++++.++..-+|+. ++..+ +++.+++.|+++|.- . +++-+
T Consensus 196 ~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE~--------P--------~~~~~ 254 (407)
T 2o56_A 196 KILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT----TSAIQ-FGRMIEELGIFYYEE--------P--------VMPLN 254 (407)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSCEEC--------S--------SCSSS
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEeC--------C--------CChhh
Confidence 46688889999999987 68899998877753 34444 356688999987741 1 12234
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
|+...++.+. .++||++.+.+.|+++++++++ ..||.|++
T Consensus 255 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 255 PAQMKQVADK-VNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHH-CCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 7777777765 5899999999999999999998 66998876
No 164
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=96.93 E-value=0.0054 Score=57.42 Aligned_cols=96 Identities=10% Similarity=0.023 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.+...-||+. ++..++ ++.+++.|+++|. +. +++-+|
T Consensus 192 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~a~~~-~~~l~~~~i~~iE--------qP--------~~~~d~ 250 (392)
T 1tzz_A 192 PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNL----ETGIAY-AKMLRDYPLFWYE--------EV--------GDPLDY 250 (392)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCH----HHHHHH-HHHHTTSCCSEEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHHH-HHHHHHcCCCeec--------CC--------CChhhH
Confidence 5677888999999876 58899988878853 343443 5567888988774 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-c----CCCEEEe
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-K----GAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~----g~DgVmI 141 (282)
+...++.+. .++||++.+.++|+++++++++ . .||.|++
T Consensus 251 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~i 294 (392)
T 1tzz_A 251 ALQAALAEF-YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQF 294 (392)
T ss_dssp HHHHHHTTT-CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECC
T ss_pred HHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEE
Confidence 777777654 5899999999999999999998 5 6998877
No 165
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.93 E-value=0.0013 Score=56.30 Aligned_cols=52 Identities=17% Similarity=0.016 Sum_probs=43.6
Q ss_pred CccHHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 98 PLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 98 ~~~~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
+..|+.+.++.+.. +++||++-|||+ ++++.++++.|++||.+++++...+.
T Consensus 128 ~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~d 180 (210)
T 3ceu_A 128 TYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKFD 180 (210)
T ss_dssp CCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTTCC
T ss_pred CCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcCCC
Confidence 34588887777643 589999999996 99999999999999999999987554
No 166
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=96.91 E-value=0.0043 Score=58.62 Aligned_cols=100 Identities=10% Similarity=-0.014 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.|...-||+. ++..+ +++.+++.|+++|. +. +++-++
T Consensus 160 ~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE--------eP--------~~~~d~ 218 (405)
T 3rr1_A 160 AVDAAVARVAEIRSAFGNTVEFGLDFHGRVSA----PMAKV-LIKELEPYRPLFIE--------EP--------VLAEQA 218 (405)
T ss_dssp HHHHHHHHHHHHHHTTGGGSEEEEECCSCBCH----HHHHH-HHHHHGGGCCSCEE--------CS--------SCCSST
T ss_pred hHHHHHHHHHHHHHHhCCCceEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CC--------CCcccH
Confidence 4566778899999987 68899988878864 33333 45678888988874 11 112236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
+...++.+. .++||++.+.+.|+++++++++ ..||.|++--+-
T Consensus 219 ~~~~~l~~~-~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~ 262 (405)
T 3rr1_A 219 ETYARLAAH-THLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSH 262 (405)
T ss_dssp HHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTT
T ss_pred HHHHHHHhc-CCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhh
Confidence 666677664 6899999999999999999998 679998875433
No 167
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=96.86 E-value=0.0092 Score=55.61 Aligned_cols=100 Identities=6% Similarity=0.017 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.|+..-||+..+ ..+ +++.+++.|+.+|. +. +++-++
T Consensus 173 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~-A~~----~~~~l~~~~i~~iE--------qP--------~~~~d~ 231 (377)
T 3my9_A 173 PHAEELRILETMRGEFGERIDLRLDFNQALTPFG-AMK----ILRDVDAFRPTFIE--------QP--------VPRRHL 231 (377)
T ss_dssp CHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTT-HHH----HHHHHHTTCCSCEE--------CC--------SCTTCH
T ss_pred cHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHH-HHH----HHHHHhhcCCCEEE--------CC--------CCccCH
Confidence 3455667778888776 5788888888887533 222 34567788888774 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
+...++.+. .++||.+++.+.|++|+.++++ ..||.|++--+-
T Consensus 232 ~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 275 (377)
T 3my9_A 232 DAMAGFAAA-LDTPILADESCFDAVDLMEVVRRQAADAISVKIMK 275 (377)
T ss_dssp HHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHH
T ss_pred HHHHHHHHh-CCCCEEECCccCCHHHHHHHHHcCCCCEEEecccc
Confidence 777777665 5899999999999999999998 779998775333
No 168
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.84 E-value=0.0063 Score=54.01 Aligned_cols=118 Identities=17% Similarity=0.267 Sum_probs=74.8
Q ss_pred HHHHHHhhcCCccEEEEec------------CCCCCC------CcHHHHHHHHHHHHHhCCCCEE-EEecCCc-------
Q 023442 30 EAMSVIAANTNVPVSVKCR------------IGVDDH------DSYNQLCDFIYKVSSLSPTRHF-IIHSRKA------- 83 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR------------~G~d~~------~~~~e~~~~v~~~le~~Gv~~i-~VH~Rt~------- 83 (282)
+-++++++.+++||-.|== .|-|-- -+-.++.+ +...+.+.|.+.+ .||....
T Consensus 94 ~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~-l~~~A~~lGl~~LvEVh~~~El~rAl~~ 172 (258)
T 4a29_A 94 ETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELES-LLEYARSYGMEPLILINDENDLDIALRI 172 (258)
T ss_dssp HHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHH-HHHHHHHTTCCCEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHH-HHHHHHHHhHHHHHhcchHHHHHHHhcC
Confidence 5567888889999987721 122210 01112222 3345567776544 4664320
Q ss_pred --ccCCCCcCCcCCC--CCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 84 --LLNGISPAENRTI--PPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 84 --~~~G~~~ad~~~i--~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
..=|. +|+.. -.++.+...++....| ++.+|+-+||.|++|+.++.+.|+|+|.||.++|.+|.-
T Consensus 173 ~a~iIGI---NNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~ 242 (258)
T 4a29_A 173 GARFIGI---MSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEK 242 (258)
T ss_dssp TCSEEEE---CSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTH
T ss_pred CCcEEEE---eCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcH
Confidence 01121 22211 1334666667776654 588999999999999999999999999999999999973
No 169
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=96.83 E-value=0.0056 Score=57.79 Aligned_cols=95 Identities=6% Similarity=0.010 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
.+...+++++|++++ ++++.|+..-||+. ++..+ +++.+++.|+++|..-. -+++
T Consensus 196 ~~~~~e~v~avR~avG~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE~P~------------------~d~~ 252 (409)
T 3go2_A 196 LRNLRAHLEALRDGAGPDVEILLDLNFNAKP----EGYLK-ILRELADFDLFWVEIDS------------------YSPQ 252 (409)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHH-HHHHTTTSCCSEEECCC------------------SCHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHhhcCCeEEEeCc------------------CCHH
Confidence 456778999999987 68999998888864 33333 45678899999987321 1266
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecH
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGR 143 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGR 143 (282)
...++.+. .++||++.+.+.|+++++++++ ..||.|++=-
T Consensus 253 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 253 GLAYVRNH-SPHPISSCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp HHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 66677664 6899999999999999999999 6699988753
No 170
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=96.82 E-value=0.0023 Score=60.68 Aligned_cols=100 Identities=6% Similarity=-0.014 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. .+..+ +++.+++.|+++|.= .. ++-++
T Consensus 202 ~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEq--------P~--------~~~d~ 260 (418)
T 3r4e_A 202 ALNYVPKLFEELRKTYGFDHHLLHDGHHRYTP----QEAAN-LGKMLEPYQLFWLED--------CT--------PAENQ 260 (418)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEES--------CS--------CCSSG
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCH----HHHHH-HHHHHHhhCCCEEEC--------CC--------CccCH
Confidence 3567788999999987 68999999888864 33333 456788999998851 11 11124
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
+...++.+. .++||++.+.+.|+++++++++ ..||.|++--+-
T Consensus 261 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~ 304 (418)
T 3r4e_A 261 EAFRLVRQH-TVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVG 304 (418)
T ss_dssp GGGHHHHHH-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred HHHHHHHhc-CCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccc
Confidence 445566654 5899999999999999999999 669988765333
No 171
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.81 E-value=0.0053 Score=56.46 Aligned_cols=108 Identities=16% Similarity=0.217 Sum_probs=72.8
Q ss_pred cccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCC--CCEEEEecCCcccCCCC
Q 023442 12 AGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP--TRHFIIHSRKALLNGIS 89 (282)
Q Consensus 12 ~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~G--v~~i~VH~Rt~~~~G~~ 89 (282)
.+.+.+|.....+++...+.++.+++. ++|+++.+ |+.. +. .+. ++.+.++| ++.+.++.. .|.
T Consensus 67 ~~~gg~g~~~~~~~~~~~~~i~~~~~~-g~~v~v~~--g~~~-~~----~~~-a~~~~~~g~~~~~i~i~~~----~G~- 132 (336)
T 1ypf_A 67 AENNYFYIMHRFQPEKRISFIRDMQSR-GLIASISV--GVKE-DE----YEF-VQQLAAEHLTPEYITIDIA----HGH- 132 (336)
T ss_dssp HHTTCCCCCCCSSGGGHHHHHHHHHHT-TCCCEEEE--CCSH-HH----HHH-HHHHHHTTCCCSEEEEECS----SCC-
T ss_pred HhCCCEEEecCCCCHHHHHHHHHHHhc-CCeEEEeC--CCCH-HH----HHH-HHHHHhcCCCCCEEEEECC----CCC-
Confidence 344555656666777777888877653 66888873 5532 11 122 34456788 999988752 121
Q ss_pred cCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 90 PAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 90 ~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
++..|+.+..+++..+.+||+ .|.|.|+++++++.+.|||+|.+
T Consensus 133 -------~~~~~~~i~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 133 -------SNAVINMIQHIKKHLPESFVI-AGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp -------SHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEE
T ss_pred -------cHHHHHHHHHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEE
Confidence 123477888887765445555 57799999999999999999999
No 172
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=96.79 E-value=0.0055 Score=57.55 Aligned_cols=97 Identities=8% Similarity=-0.090 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCC-CCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGV-DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~-d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++.-.+++++|++++ ++++.+...-|| +. ++..+ +++.+++.|+++|. +- +++-+
T Consensus 187 ~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~----~~A~~-~~~~L~~~~i~~iE--------eP--------~~~~d 245 (394)
T 3mkc_A 187 STKEVAYYLRELRGILGHDTDMMVDYLYRFTDW----YEVAR-LLNSIEDLELYFAE--------AT--------LQHDD 245 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCH----HHHHH-HHHHTGGGCCSEEE--------SC--------SCTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCH----HHHHH-HHHHhhhcCCeEEE--------CC--------CCchh
Confidence 5777788899999887 688999888888 43 23333 45677888988874 11 12223
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
++...++.+. .++||++.+.+.|++++.++++ ..||.|++-
T Consensus 246 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 246 LSGHAKLVEN-TRSRICGAEMSTTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp HHHHHHHHHH-CSSCBEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCeEecC
Confidence 6667777665 5899999999999999999999 679988664
No 173
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=96.79 E-value=0.0055 Score=57.16 Aligned_cols=96 Identities=7% Similarity=-0.031 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhC-CCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~-Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++...+++++|++++ ++++.++..-||+. ++..+ +++.+++. |+++|. +. +++-+
T Consensus 166 ~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~~i~~iE--------qP--------~~~~d 224 (382)
T 2gdq_A 166 SFKEDVRHINALQHTAGSSITMILDANQSYDA----AAAFK-WERYFSEWTNIGWLE--------EP--------LPFDQ 224 (382)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH----HHHHT-THHHHTTCSCEEEEE--------CC--------SCSSC
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCH----HHHHH-HHHHHhhccCCeEEE--------CC--------CCccc
Confidence 5788888899998877 68888888877753 33333 34567788 877663 11 12224
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
|+...++.+. .++||++.+.+.|+++++++++ ..||.|++
T Consensus 225 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 225 PQDYAMLRSR-LSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp HHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 7777777664 5899999999999999999998 66998876
No 174
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.77 E-value=0.0034 Score=54.36 Aligned_cols=77 Identities=21% Similarity=0.263 Sum_probs=50.5
Q ss_pred HhCCCCEEEEecCCcccCCC--CcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 69 SLSPTRHFIIHSRKALLNGI--SPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~--~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRga 145 (282)
.+.|.+.|.++.|...=.|. .... +-..+.+.++++..+ ++||++-|+|.+++++..+.+.|+|||.||+++
T Consensus 128 ~~~~~~~i~~~~~~~iGtG~~~~t~~-----~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi 202 (219)
T 2h6r_A 128 AALSPDCIAVEPPELIGTGIPVSKAN-----PEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGV 202 (219)
T ss_dssp TTTCCSEEEECCCC-------------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHH
T ss_pred HhCCCCEEEEEeccccccCCCCccCC-----HHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHH
Confidence 45677778888775311221 0010 101233334444433 799999999999999999988999999999999
Q ss_pred hhCCc
Q 023442 146 YQNPW 150 (282)
Q Consensus 146 l~nP~ 150 (282)
+.-+.
T Consensus 203 ~~~~d 207 (219)
T 2h6r_A 203 VKAKN 207 (219)
T ss_dssp HTCSS
T ss_pred hCccc
Confidence 88776
No 175
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=96.76 E-value=0.008 Score=56.46 Aligned_cols=97 Identities=9% Similarity=0.022 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc-
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK- 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~- 100 (282)
+++.-.+.+++|++++ ++++.|+..-+|+. .+..+ +++.+++.|+.+|. +. +++-+
T Consensus 181 ~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE--------eP--------~~~~d~ 239 (392)
T 3ddm_A 181 DDARDVRNALHVRELLGAATPLMADANQGWDL----PRARQ-MAQRLGPAQLDWLE--------EP--------LRADRP 239 (392)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEE--------CC--------SCTTSC
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCH----HHHHH-HHHHHHHhCCCEEE--------CC--------CCccch
Confidence 6777888999999986 68999999888864 23333 45678889998885 11 12223
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
++...++.+. .++||.+.+.+.|++|+.++++ ..||.|++-
T Consensus 240 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 240 AAEWAELAQA-APMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp HHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHh-cCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 6666677665 5899999999999999999998 678887663
No 176
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=96.68 E-value=0.0041 Score=59.10 Aligned_cols=100 Identities=4% Similarity=0.050 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
.+...+++++|++++ ++++.|...-||+. .+..+ +++.+++.|+++|.= -. ++-+++
T Consensus 209 ~~~d~e~v~avR~avG~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEq--------P~--------~~~d~~ 267 (424)
T 3v3w_A 209 LNYIPDVFAAVRKEFGPDIHLLHDVHHRLTP----IEAAR-LGKALEPYHLFWMED--------AV--------PAENQE 267 (424)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEEC--------CS--------CCSSTT
T ss_pred HHHHHHHHHHHHHHcCCCCcEEEeCCCCCCH----HHHHH-HHHHHHhcCCCEEEC--------CC--------ChHhHH
Confidence 467788999999987 68999998888864 33333 456788999998851 11 111245
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
...++.+. .++||++.+.+.|+++++++++ ..||.|++--+-.
T Consensus 268 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 311 (424)
T 3v3w_A 268 SFKLIRQH-TTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA 311 (424)
T ss_dssp HHHHHHHH-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHhh-CCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhc
Confidence 55666665 5899999999999999999999 6699887754333
No 177
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=96.66 E-value=0.0077 Score=57.19 Aligned_cols=96 Identities=7% Similarity=-0.038 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.++..-||+. ++..++ ++.+++.|+++|. +. +++-++
T Consensus 211 ~~~~d~e~v~avR~avG~d~~l~vDan~~~~~----~eai~~-~~~L~~~~i~~iE--------qP--------~~~~d~ 269 (428)
T 3bjs_A 211 AARVDIERVRHVRKVLGDEVDILTDANTAYTM----ADARRV-LPVLAEIQAGWLE--------EP--------FACNDF 269 (428)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH----HHHHHH-HHHHHHTTCSCEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH----HHHHHH-HHHHHhcCCCEEE--------CC--------CCccCH
Confidence 5778889999999886 68899988877753 344443 4567889998774 11 122236
Q ss_pred HHHHHHHhcCCC-ceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 102 EYYYALLRDFPD-LTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~~~-ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+...++.+. .+ +||++.+.+.|+++++++++ ..||.|++
T Consensus 270 ~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 270 ASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp HHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 777677654 57 99999999999999999998 56888766
No 178
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.65 E-value=0.0038 Score=52.80 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=49.7
Q ss_pred HHhCCCCEEEEe-cCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 68 SSLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 68 le~~Gv~~i~VH-~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
+++.|++.+.+| +.+....|. ++.. +.++++... ++||++-|||+ ++.+.++++.|+|+|.+||+++
T Consensus 123 ~~~~g~d~v~~~~~~~~~~~g~--------~~~~-~~i~~~~~~--~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 123 VRALGAKFVEMHAGLDEQAKPG--------FDLN-GLLAAGEKA--RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp HHHTTCSEEEEECCHHHHTSTT--------CCTH-HHHHHHHHH--TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHH
T ss_pred HHHhCCCEEEEEecccccccCC--------CchH-HHHHHhhCC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeecc
Confidence 346789999555 443222232 1222 445555432 68999999997 8899999999999999999998
Q ss_pred hCCc
Q 023442 147 QNPW 150 (282)
Q Consensus 147 ~nP~ 150 (282)
..+.
T Consensus 191 ~~~d 194 (207)
T 3ajx_A 191 GAAD 194 (207)
T ss_dssp TSSS
T ss_pred CCCC
Confidence 7665
No 179
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=96.65 E-value=0.0075 Score=57.06 Aligned_cols=102 Identities=11% Similarity=0.006 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++||+++ ++++.++..-||+. .+..+ +++.+++.|+.+|.= - +++-++
T Consensus 183 ~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEe--------P--------~~~~d~ 241 (412)
T 4e4u_A 183 VLDRCELFCRRVREAVGSKADLLFGTHGQMVP----SSAIR-LAKRLEKYDPLWFEE--------P--------VPPGQE 241 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH----HHHHH-HHHHHGGGCCSEEEC--------C--------SCSSCH
T ss_pred hHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHH-HHHHhhhcCCcEEEC--------C--------CChhhH
Confidence 3667788899999987 68999988888864 33333 456788999988851 1 122236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQ 147 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~ 147 (282)
+...++.+. .++||.+.+.+.|+++++++++ ..||.|++--+-.+
T Consensus 242 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~G 287 (412)
T 4e4u_A 242 EAIAQVAKH-TSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVG 287 (412)
T ss_dssp HHHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTT
T ss_pred HHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 777777664 5899999999999999999999 66998876543333
No 180
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.65 E-value=0.012 Score=54.79 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
.++...+.++.+++..++||.+-+- ... .+. ++.+.++|++.|+++.-. |.+ ..-.+.
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig--~~~----~e~----a~~l~eaGad~I~ld~a~----G~~--------~~~~~~ 136 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIG--VNE----IER----AKLLVEAGVDVIVLDSAH----GHS--------LNIIRT 136 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEEC--TTC----HHH----HHHHHHTTCSEEEECCSC----CSB--------HHHHHH
T ss_pred CHHHHHHHHHHHHhccCceEEEEeC--CCH----HHH----HHHHHHcCcCeEEEeCCC----CCc--------HHHHHH
Confidence 5777888889998877788887763 322 222 234567999999987421 210 001355
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+.++++.+ ++||++ |++.|+++++.+.+.|+|+|.+|
T Consensus 137 i~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 137 LKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhc-CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 66666655 889987 67899999999999999999996
No 181
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=96.64 E-value=0.0054 Score=58.23 Aligned_cols=103 Identities=8% Similarity=0.018 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++...+++++||+++ ++++.++..-||+. .+..+ +++.+++.|+.+|. +.. ++-+++
T Consensus 205 ~~~d~e~v~avR~avG~d~~L~vDaN~~~~~----~~A~~-~~~~Le~~~i~~iE--------qP~--------~~~d~~ 263 (422)
T 3tji_A 205 MSNTVEMFHALREKYGWKLHILHDVHERLFP----QQAVQ-LAKQLEPFQPYFIE--------DIL--------PPQQSA 263 (422)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE--------CCS--------CGGGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhhCCCeEE--------CCC--------ChhhHH
Confidence 567788899999987 68999999888864 23333 45678889998885 111 122245
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCC
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP 149 (282)
...++.+. .++||.+.+.+.|+++++++++ ..||.|++--+-.+..
T Consensus 264 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGi 310 (422)
T 3tji_A 264 WLEQVRQQ-SCVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGI 310 (422)
T ss_dssp GHHHHHHH-CCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSH
T ss_pred HHHHHHhh-CCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCH
Confidence 55666665 5899999999999999999998 6799988765544443
No 182
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.64 E-value=0.003 Score=55.08 Aligned_cols=120 Identities=14% Similarity=0.135 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc----------------c---
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA----------------L--- 84 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~----------------~--- 84 (282)
+.....++++++++.+++||.+............++ + .+.+.++|++.+++|.-.. .
T Consensus 64 ~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~---~-~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~ 139 (248)
T 1geq_A 64 KLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRN---F-LAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFL 139 (248)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHH---H-HHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHH---H-HHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEE
Confidence 667778999999998889998865311000000122 2 2344578999999884110 0
Q ss_pred cCCCCc----------CC------------cC--CCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 85 LNGISP----------AE------------NR--TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 85 ~~G~~~----------ad------------~~--~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
....++ ++ .. ..++..++.+.++++. .++||++.|||++.+++.++++.|+|+|.
T Consensus 140 i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~-~~~pi~~~GGI~~~e~i~~~~~~Gad~vi 218 (248)
T 1geq_A 140 AAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI-CRNKVAVGFGVSKREHVVSLLKEGANGVV 218 (248)
T ss_dssp ECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred ECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh-cCCCEEEEeecCCHHHHHHHHHcCCCEEE
Confidence 000000 01 00 0112235567777664 48999999999999999999999999999
Q ss_pred ecHHhhhC
Q 023442 141 VGRAAYQN 148 (282)
Q Consensus 141 IGRgal~n 148 (282)
+|++++..
T Consensus 219 vGsai~~~ 226 (248)
T 1geq_A 219 VGSALVKI 226 (248)
T ss_dssp ECHHHHHH
T ss_pred EcHHHHhh
Confidence 99998764
No 183
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=96.61 E-value=0.012 Score=54.71 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.|+..-+|+. .+..+ +++.+++.|+.+|. +. +++-++
T Consensus 179 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP--------~~~~d~ 237 (372)
T 3tj4_A 179 DPNIDIARLTAVRERVDSAVRIAIDGNGKWDL----PTCQR-FCAAAKDLDIYWFE--------EP--------LWYDDV 237 (372)
T ss_dssp SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCH----HHHHH-HHHHTTTSCEEEEE--------SC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCH----HHHHH-HHHHHhhcCCCEEE--------CC--------CCchhH
Confidence 3555566777777766 56777777766753 22222 34456666666553 11 122247
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+...++.+. .++||.+.+.+.|++|+.++++ ..+|.|++
T Consensus 238 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 277 (372)
T 3tj4_A 238 TSHARLARN-TSIPIALGEQLYTVDAFRSFIDAGAVAYVQP 277 (372)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHhh-cCCCEEeCCCccCHHHHHHHHHcCCCCEEEe
Confidence 777777665 5899999999999999999998 66887765
No 184
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=96.61 E-value=0.0044 Score=57.35 Aligned_cols=102 Identities=10% Similarity=0.013 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.++..-+|+. .+..+ +++.+++.|+.+|. +.. ++-++
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP~--------~~~d~ 224 (356)
T 3ro6_B 166 DEEQDFERLRRLHETLAGRAVVRVDPNQSYDR----DGLLR-LDRLVQELGIEFIE--------QPF--------PAGRT 224 (356)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCH----HHHHH-HHHHHHHTTCCCEE--------CCS--------CTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCH----HHHHH-HHHHHHhcCCCEEE--------CCC--------CCCcH
Confidence 5677778888888876 68899998888864 23233 45667888888884 111 12236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-c-CCCEEEecHHhhh
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-K-GAHHVMVGRAAYQ 147 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~-g~DgVmIGRgal~ 147 (282)
+...++.+. .++||.+++.+.|++|+.++++ . .||.|++--+-.+
T Consensus 225 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~G 271 (356)
T 3ro6_B 225 DWLRALPKA-IRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCG 271 (356)
T ss_dssp HHHHTSCHH-HHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHC
T ss_pred HHHHHHHhc-CCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccC
Confidence 655555443 4799999999999999999998 6 7999998655443
No 185
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.60 E-value=0.0016 Score=55.48 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
+.+.++.+. .++|||+.|.|.|.+|+.++++.|||+|+.+...|++-
T Consensus 140 ~iI~~i~~~-~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 140 EQVQKMTQK-LHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHHH-HCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred HHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 456666654 58999999999999999999999999999997766553
No 186
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.59 E-value=0.0041 Score=57.97 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=49.0
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++.+.++|++.|++|.-. |.+ ..-|+.+..+++..+++||++ |+|.|+++++.+.+.|||+|.+|
T Consensus 105 ~~~a~~aGvdvI~id~a~----G~~--------~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 105 AEALRDAGADFFCVDVAH----AHA--------KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHTTCCEEEEECSC----CSS--------HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEeCCC----CCc--------HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 345678999999997522 211 112677777776656899987 67999999999999999999985
No 187
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.57 E-value=0.0025 Score=62.62 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=56.0
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHH-----------HHHHH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE-----------VNAAL 132 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~ed-----------a~~~l 132 (282)
+++.+++.|++.|++--=+....|. . ..+...+.++++++. ..+||+..|||.+.+| +++++
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~--~----~~~~~~~~i~~i~~~-~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCP--L----KDTPMLEVLKQAAKT-VFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCC--G----GGCHHHHHHHHHTTT-CCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCcccccc--C----CCchHHHHHHHHHhh-CCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 4667788999999875322221121 0 012236667777664 5899999999999844 99999
Q ss_pred HcCCCEEEecHHhhhC
Q 023442 133 RKGAHHVMVGRAAYQN 148 (282)
Q Consensus 133 ~~g~DgVmIGRgal~n 148 (282)
+.|||.|.||.+++.|
T Consensus 358 ~aGad~V~igt~~~~~ 373 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYA 373 (555)
T ss_dssp HHTCSEEEECHHHHHH
T ss_pred HcCCCEEEECCHHhhC
Confidence 9999999999999884
No 188
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=96.56 E-value=0.0091 Score=56.97 Aligned_cols=103 Identities=9% Similarity=0.032 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
.+...+++++|++++ ++++.|+..-+|+. .+..+ +++.+++.|+.+|. +.. ++-+++
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE--------eP~--------~~~d~~ 281 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVELLHDAHERITP----INAIH-MAKALEPYQLFFLE--------DPV--------APENTE 281 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHTGGGCCSEEE--------CSS--------CGGGGG
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHH-HHHHhhhcCCCEEE--------CCC--------ChhhHH
Confidence 456778899999987 68999999988864 23333 45677888998884 111 122345
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCC
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP 149 (282)
...++.+. .++||.+++.+.|.+++.++++ ..||.|++--+-.+..
T Consensus 282 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi 328 (440)
T 3t6c_A 282 WLKMLRQQ-SSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGI 328 (440)
T ss_dssp GHHHHHHH-CCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSH
T ss_pred HHHHHHhh-cCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCH
Confidence 55666654 5899999999999999999998 6799988765444443
No 189
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=96.50 E-value=0.025 Score=52.79 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
+++.-.+.+++|++++ ++++.|...-+|+..+ .. + +++.+++.|+.+|. +. +++-+++
T Consensus 175 ~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~-A~---~-~~~~L~~~~i~~iE--------qP--------~~~~d~~ 233 (385)
T 3i6e_A 175 DHAFDIMRLELIARDFPEFRVRVDYNQGLEIDE-AV---P-RVLDVAQFQPDFIE--------QP--------VRAHHFE 233 (385)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGG-HH---H-HHHHHHTTCCSCEE--------CC--------SCTTCHH
T ss_pred CHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHH-HH---H-HHHHHHhcCCCEEE--------CC--------CCcccHH
Confidence 3455566677777765 6678888877886422 22 2 34566777877773 11 1222477
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAA 145 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRga 145 (282)
...++.+. .++||.+...+.|++|+.++++ ..||.|++--+-
T Consensus 234 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 276 (385)
T 3i6e_A 234 LMARLRGL-TDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMK 276 (385)
T ss_dssp HHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccc
Confidence 77777664 5899999999999999999998 779998875433
No 190
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.48 E-value=0.0052 Score=54.95 Aligned_cols=120 Identities=18% Similarity=0.193 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHhhc-CCccEEEEec------------------CCCCC----CCcHHHHHHHHHHHHHhCCCCEEEEe-
Q 023442 24 DPKFVGEAMSVIAAN-TNVPVSVKCR------------------IGVDD----HDSYNQLCDFIYKVSSLSPTRHFIIH- 79 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~-~~ipvsvKiR------------------~G~d~----~~~~~e~~~~v~~~le~~Gv~~i~VH- 79 (282)
+.+.+.++++++++. +++|+.+-.- .|.|. +...++..+ +.+.+++.|++.+.+-
T Consensus 78 ~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~-~~~~~~~~gl~~i~lia 156 (267)
T 3vnd_A 78 TSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAP-FSKAAKAHGIAPIFIAP 156 (267)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEECEEC
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHH-HHHHHHHcCCeEEEEEC
Confidence 455677889999887 7889877532 12221 012233222 3446678898877442
Q ss_pred cCCc------------------ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 80 SRKA------------------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 80 ~Rt~------------------~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
+.|. ...|..+... .+++.-.+.+.++++ ..++||+..|||.|++++.+.+..|||||.+
T Consensus 157 P~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~-~~~~~~~~~v~~vr~-~~~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 157 PNADADTLKMVSEQGEGYTYLLSRAGVTGTES-KAGEPIENILTQLAE-FNAPPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp TTCCHHHHHHHHHHCCSCEEESCCCCCC---------CHHHHHHHHHT-TTCCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEecCCCCCCcc-CCcHHHHHHHHHHHH-hcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 2220 0122211111 122223456666654 4689999999999999999888889999999
Q ss_pred cHHhh
Q 023442 142 GRAAY 146 (282)
Q Consensus 142 GRgal 146 (282)
|.++.
T Consensus 235 GSaiv 239 (267)
T 3vnd_A 235 GSAVV 239 (267)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98765
No 191
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.48 E-value=0.018 Score=53.70 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+++...+.++.+++.-.++|.+-+ |+.. + ..+.+ +.+.++|++.|.++.- .|.+ +.-.+.
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~v--g~~~-~-~~~~~----~~lieaGvd~I~idta----~G~~--------~~~~~~ 139 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAV--GAAP-G-NEERV----KALVEAGVDVLLIDSS----HGHS--------EGVLQR 139 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEEC--CSCT-T-CHHHH----HHHHHTTCSEEEEECS----CTTS--------HHHHHH
T ss_pred CHHHHHHHHHHHHhcCceeEEEEe--ccCh-h-HHHHH----HHHHhCCCCEEEEeCC----CCCC--------HHHHHH
Confidence 678888888888875334444433 3332 1 12222 3456899999998642 1211 101345
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+.++++.++++||++ |.+.|+++++++.+.|+|+|.+|
T Consensus 140 I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 140 IRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 667777777888876 78999999999999999999995
No 192
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.46 E-value=0.029 Score=53.81 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+.+.+.++++..++ .+..+.|-+. +.+|+. + +.++|++.|-+..|.- ... .++++.
T Consensus 142 ~~~~l~~l~~~a~~-lgm~~LvEvh-------~~eE~~----~-A~~lga~iIGinnr~L--~t~---------~~dl~~ 197 (452)
T 1pii_A 142 DDDQYRQLAAVAHS-LEMGVLTEVS-------NEEEQE----R-AIALGAKVVGINNRDL--RDL---------SIDLNR 197 (452)
T ss_dssp CHHHHHHHHHHHHH-TTCEEEEEEC-------SHHHHH----H-HHHTTCSEEEEESEET--TTT---------EECTHH
T ss_pred CHHHHHHHHHHHHH-cCCeEEEEeC-------CHHHHH----H-HHHCCCCEEEEeCCCC--CCC---------CCCHHH
Confidence 34567777777665 4777766553 334432 2 2468999999988742 222 123566
Q ss_pred HHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCccchhhhHhhhhC
Q 023442 104 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYG 162 (282)
Q Consensus 104 i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~if~~~~~~~~~g 162 (282)
..+++...+ ++++|+-|||.|++|+.++.+. +|+|.||.+++..+.+ ...++....|
T Consensus 198 ~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d~-~~~~~~l~~~ 255 (452)
T 1pii_A 198 TRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDDL-HAAVRRVLLG 255 (452)
T ss_dssp HHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSCH-HHHHHHHHHC
T ss_pred HHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCH-HHHHHHHHHH
Confidence 666665544 6899999999999999999999 9999999999999886 4545544444
No 193
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=96.43 E-value=0.022 Score=53.32 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.|+..-+|+. .+..+ +++.+++.|+.+|. +. +++-++
T Consensus 201 ~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------qP--------~~~~d~ 259 (390)
T 3ugv_A 201 DPAVDIETAEAVWDAVGRDTALMVDFNQGLDM----AEAMH-RTRQIDDLGLEWIE--------EP--------VVYDNF 259 (390)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH----HHHHH-HHHHHTTSCCSEEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHHhhCCCEEE--------CC--------CCcccH
Confidence 4566667788888776 57888888777753 23233 34567778887774 11 122246
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||.+.+.+.|++|+.++++ ..+|.|++-
T Consensus 260 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 300 (390)
T 3ugv_A 260 DGYAQLRHD-LKTPLMIGENFYGPREMHQALQAGACDLVMPD 300 (390)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred HHHHHHHHh-cCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 777777665 5899999999999999999998 668987654
No 194
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.43 E-value=0.0057 Score=54.43 Aligned_cols=46 Identities=24% Similarity=0.269 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.+.++.+ ..++||+..|||.|++++.+++..|||+|++|.++..
T Consensus 194 ~~~i~~lr~-~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 194 HHLIEKLKE-YHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHH-TTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHh-ccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 567777765 4589999999999999999988889999999988754
No 195
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.43 E-value=0.0027 Score=61.26 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=36.2
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+++++ .++|||+.|||.+..|+.+++..|||+||+|+.++.
T Consensus 321 ~~~~~~-~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 321 ADRAQE-YGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp HHHHHH-HTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHH-cCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 344443 379999999999999999999999999999998875
No 196
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=96.41 E-value=0.0085 Score=56.90 Aligned_cols=99 Identities=5% Similarity=-0.084 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 26 KFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 26 ~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+...+++++||+++ ++++.|...-||+. .+..+ +++.+++.|+++|.- -. ++-+++.
T Consensus 211 ~~d~e~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEq--------P~--------~~~d~~~ 269 (425)
T 3vcn_A 211 NSVPKLFERAREVLGWDVHLLHDVHHRLTP----IEAAR-LGKDLEPYRLFWLED--------SV--------PAENQAG 269 (425)
T ss_dssp TTTHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEEC--------CS--------CCSSTTH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEEC--------CC--------ChhhHHH
Confidence 34567888999887 68999998888864 33333 456788999998851 11 1112455
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
..++.+. .++||++.+.+.|+++++++++ ..||.|++--+-.
T Consensus 270 ~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 312 (425)
T 3vcn_A 270 FRLIRQH-TTTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHA 312 (425)
T ss_dssp HHHHHHH-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHhc-CCCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhc
Confidence 5666664 5899999999999999999999 6699887754333
No 197
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=96.41 E-value=0.017 Score=53.69 Aligned_cols=97 Identities=5% Similarity=0.061 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.|...-||+. .+..+ +++.+++.|+.+|. +. +++-++
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------qP--------~~~~~~ 224 (368)
T 3q45_A 166 SKELDVERIRMIREAAGDSITLRIDANQGWSV----ETAIE-TLTLLEPYNIQHCE--------EP--------VSRNLY 224 (368)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCH----HHHHH-HHHHHGGGCCSCEE--------CC--------BCGGGG
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCh----HHHHH-HHHHHhhcCCCEEE--------CC--------CChhHH
Confidence 4555666777777765 56777777767753 23222 34566777777774 11 112234
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+...++.+. .++||.+.+.+.|++|+.++++ ..+|.|++-
T Consensus 225 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k 265 (368)
T 3q45_A 225 TALPKIRQA-CRIPIMADESCCNSFDAERLIQIQACDSFNLK 265 (368)
T ss_dssp GGHHHHHHT-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCeEEec
Confidence 555566654 5899999999999999999998 679998874
No 198
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.40 E-value=0.01 Score=52.04 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=50.7
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
.++|+|.|-+.+-.. .| ..+++++++.-++++|++..||| |++.+.+.++.|+.++.+|. .+.+
T Consensus 144 ~~~Gad~vK~FPa~~--~g------------G~~~lkal~~p~p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs-~l~~ 207 (232)
T 4e38_A 144 LEMGLTTLKFFPAEA--SG------------GISMVKSLVGPYGDIRLMPTGGI-TPSNIDNYLAIPQVLACGGT-WMVD 207 (232)
T ss_dssp HHTTCCEEEECSTTT--TT------------HHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBCCEEEC-GGGC
T ss_pred HHcCCCEEEECcCcc--cc------------CHHHHHHHHHHhcCCCeeeEcCC-CHHHHHHHHHCCCeEEEECc-hhcC
Confidence 579999998866321 11 15778788776779999999999 58999999999999888774 4455
Q ss_pred Ccc
Q 023442 149 PWY 151 (282)
Q Consensus 149 P~i 151 (282)
|.+
T Consensus 208 ~~~ 210 (232)
T 4e38_A 208 KKL 210 (232)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 199
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=96.40 E-value=0.016 Score=53.69 Aligned_cols=94 Identities=10% Similarity=0.042 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 27 FVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 27 ~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
.-.+.+++|++++ ++++.++..-||+. .+..+ +++.+++.|+++|. + .+++-+++..
T Consensus 170 ~d~~~v~avR~a~g~~~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------q--------P~~~~d~~~~ 228 (367)
T 3dg3_A 170 LDTAVVRALRERFGDAIELYVDGNRGWSA----AESLR-AMREMADLDLLFAE--------E--------LCPADDVLSR 228 (367)
T ss_dssp HHHHHHHHHHHHHGGGSEEEEECTTCSCH----HHHHH-HHHHTTTSCCSCEE--------S--------CSCTTSHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHHHhCCCEEE--------C--------CCCcccHHHH
Confidence 3345566666655 46677776666653 22222 34556666766664 1 1122236666
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
.++.+. .++||.+.+.+.|++++.++++ ..+|.|++=
T Consensus 229 ~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 229 RRLVGQ-LDMPFIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp HHHHHH-CSSCEEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 677665 5899999999999999999998 669988773
No 200
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=96.39 E-value=0.016 Score=53.50 Aligned_cols=93 Identities=11% Similarity=0.009 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 26 KFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 26 ~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+...+++++|++++ ++++.+...-||+..+ .++ ++.+++.|+++|. + .+++-+++.
T Consensus 167 ~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-----~~~-~~~l~~~~i~~iE--------~--------P~~~~~~~~ 224 (368)
T 1sjd_A 167 GWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-----APQ-LARLDPFGLLLIE--------Q--------PLEEEDVLG 224 (368)
T ss_dssp TBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-----HHH-HHTTGGGCCSEEE--------C--------CSCTTCHHH
T ss_pred hhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-----HHH-HHHHHhcCCCeEe--------C--------CCChhhHHH
Confidence 33446666666655 4666666666665422 222 3446677777653 1 122334777
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
..++.+. .++||.+.+.++|+++++++++ ..||.|++
T Consensus 225 ~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 225 HAELARR-IQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp HHHHHTT-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHh-CCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 7777664 5899999999999999999998 66999988
No 201
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=96.38 E-value=0.08 Score=47.90 Aligned_cols=90 Identities=13% Similarity=0.182 Sum_probs=55.8
Q ss_pred CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEc
Q 023442 40 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 119 (282)
Q Consensus 40 ~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~n 119 (282)
++|+.+=.-.|.....+ .+++...+++..+.|+|.|-+.- .+ +.+.++++. ..+||++.
T Consensus 171 GlpvIie~~~G~~~~~d-~e~i~~aariA~elGAD~VKt~~-----t~--------------e~~~~vv~~-~~vPVv~~ 229 (295)
T 3glc_A 171 GMPTMAVTGVGKDMVRD-QRYFSLATRIAAEMGAQIIKTYY-----VE--------------KGFERIVAG-CPVPIVIA 229 (295)
T ss_dssp TCCEEEEECC----CCS-HHHHHHHHHHHHHTTCSEEEEEC-----CT--------------TTHHHHHHT-CSSCEEEE
T ss_pred CCEEEEECCCCCccCCC-HHHHHHHHHHHHHhCCCEEEeCC-----CH--------------HHHHHHHHh-CCCcEEEE
Confidence 68877633222111111 23333456778899999887652 11 012345543 47999999
Q ss_pred cCCC-CHHHHHHHH----HcCCCEEEecHHhhhCCc
Q 023442 120 GGIN-TVDEVNAAL----RKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 120 GdI~-s~eda~~~l----~~g~DgVmIGRgal~nP~ 150 (282)
||+. +.+++.+.. +.|++||.+||.++..|.
T Consensus 230 GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 230 GGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp CCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred ECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 9998 555555444 589999999999997665
No 202
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=96.34 E-value=0.0079 Score=57.14 Aligned_cols=95 Identities=5% Similarity=-0.030 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 26 KFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 26 ~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
++..+++++||+++ ++++.+...-||+. .+..+ +++.+++.|+++|.- .. ++-+++.
T Consensus 212 ~~~~e~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEe--------P~--------~~~d~~~ 270 (426)
T 4e4f_A 212 DFTPKLFEAVRDKFGFNEHLLHDMHHRLTP----IEAAR-FGKSVEDYRLFWMED--------PT--------PAENQAC 270 (426)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEECTTCSCH----HHHHH-HHHHTGGGCCSEEEC--------CS--------CCSSGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHH-HHHHHhhcCCCEEEC--------CC--------ChHHHHH
Confidence 45678999999987 68999999888864 33333 456788999998851 11 1112444
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
..++.+. .++||.+.+.+.|+++++++++ ..||.|++-
T Consensus 271 ~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k 309 (426)
T 4e4f_A 271 FRLIRQH-TVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTT 309 (426)
T ss_dssp GHHHHTT-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred HHHHHhc-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 4566554 6899999999999999999998 668988754
No 203
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=96.33 E-value=0.023 Score=53.13 Aligned_cols=96 Identities=7% Similarity=-0.007 Sum_probs=67.5
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.|+.+|. +. +++-++
T Consensus 195 ~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------eP--------~~~~d~ 253 (383)
T 3toy_A 195 DLATDEAMIKGLRALLGPDIALMLDFNQSLDP----AEATR-RIARLADYDLTWIE--------EP--------VPQENL 253 (383)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCH----HHHHH-HHHHHHhhCCCEEE--------CC--------CCcchH
Confidence 4566667778887775 57788887777753 23223 34567778887774 11 122246
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+...++.+. .++||.+.+.+.|++|+.++++ ..+|.|++
T Consensus 254 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 254 SGHAAVRER-SEIPIQAGENWWFPRGFAEAIAAGASDFIMP 293 (383)
T ss_dssp HHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhh-cCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 777777665 5899999999999999999998 66888754
No 204
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.32 E-value=0.022 Score=50.39 Aligned_cols=73 Identities=11% Similarity=-0.044 Sum_probs=57.0
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++.++++|+++|.|-.-...++|. .+.+..+.+. .++||+.-+.|.+..++..+++.|||+|.++-
T Consensus 70 ~A~~~~~~GA~~isvlt~~~~f~G~------------~~~l~~i~~~-v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~ 136 (254)
T 1vc4_A 70 AALAYARGGARAVSVLTEPHRFGGS------------LLDLKRVREA-VDLPLLRKDFVVDPFMLEEARAFGASAALLIV 136 (254)
T ss_dssp HHHHHHHTTCSEEEEECCCSSSCCC------------HHHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEH
T ss_pred HHHHHHHcCCCEEEEecchhhhccC------------HHHHHHHHHh-cCCCEEECCcCCCHHHHHHHHHcCCCEEEECc
Confidence 4566789999999985433344443 4556566554 58999999999999999998889999999999
Q ss_pred HhhhCCc
Q 023442 144 AAYQNPW 150 (282)
Q Consensus 144 gal~nP~ 150 (282)
.++. ..
T Consensus 137 ~~l~-~~ 142 (254)
T 1vc4_A 137 ALLG-EL 142 (254)
T ss_dssp HHHG-GG
T ss_pred cchH-HH
Confidence 9988 44
No 205
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.30 E-value=0.023 Score=53.41 Aligned_cols=96 Identities=5% Similarity=-0.010 Sum_probs=63.0
Q ss_pred HHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHH
Q 023442 30 EAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 107 (282)
Q Consensus 30 eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l 107 (282)
+.+++|++++ ++++.|...-+|+..+ . + +++.+++.|+.+|. + .+++-+++...++
T Consensus 193 ~~v~avR~a~G~~~~L~vDaN~~w~~~~-~----~-~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l 250 (400)
T 3mwc_A 193 EPLQETRRAVGDHFPLWTDANSSFELDQ-W----E-TFKAMDAAKCLFHE--------Q--------PLHYEALLDLKEL 250 (400)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGG-H----H-HHHHHGGGCCSCEE--------S--------CSCTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCHHH-H----H-HHHHHHhcCCCEEe--------C--------CCChhhHHHHHHH
Confidence 4455555554 4566666666665422 2 2 23455666666653 1 1223347777777
Q ss_pred HhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhC
Q 023442 108 LRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQN 148 (282)
Q Consensus 108 ~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~n 148 (282)
.+. .++||.+...+.|.+|+.++++ ..+|.|++--+-.+.
T Consensus 251 ~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 291 (400)
T 3mwc_A 251 GER-IETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGG 291 (400)
T ss_dssp HHH-SSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred Hhh-CCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCC
Confidence 765 5899999999999999999998 679999886555444
No 206
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=96.29 E-value=0.017 Score=53.54 Aligned_cols=90 Identities=8% Similarity=0.003 Sum_probs=59.6
Q ss_pred HHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHH
Q 023442 29 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 107 (282)
Q Consensus 29 ~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l 107 (282)
.+++++|++++ ++++.+...-+|+..+ .++ ++.+++.|+.+|. +. +++-+|+...++
T Consensus 177 ~~~v~avr~a~~~~~l~vDan~~~~~~~-----~~~-~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l 234 (375)
T 1r0m_A 177 VQPVRATREAFPDIRLTVDANSAYTLAD-----AGR-LRQLDEYDLTYIE--------QP--------LAWDDLVDHAEL 234 (375)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGG-----HHH-HHTTGGGCCSCEE--------CC--------SCTTCSHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEeCCCCCCHHH-----HHH-HHHHHhCCCcEEE--------CC--------CCcccHHHHHHH
Confidence 34556665554 5667777666665422 222 3345666666663 11 122346666677
Q ss_pred HhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 108 LRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 108 ~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
.+. .++||.+.+.++|+++++++++ ..||.|++
T Consensus 235 ~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 235 ARR-IRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp HHH-CSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred HHh-CCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 665 5899999999999999999998 67999988
No 207
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=96.26 E-value=0.016 Score=55.14 Aligned_cols=97 Identities=7% Similarity=-0.035 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...+++++|++++ ++++.+...-||+. ++..+ +++.+++.|+++|. +. +++-++
T Consensus 224 ~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~----~~a~~-~~~~l~~~~i~~iE--------qP--------~~~~d~ 282 (441)
T 2hxt_A 224 NVQDDIRRCRLARAAIGPDIAMAVDANQRWDV----GPAID-WMRQLAEFDIAWIE--------EP--------TSPDDV 282 (441)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHTTGGGCCSCEE--------CC--------SCTTCH
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHH-HHHHHHhcCCCeee--------CC--------CCHHHH
Confidence 4666778888888876 57788777766753 33333 34556777877663 11 122236
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+...++.+....+||++.+.++|+++++++++ ..||.|++
T Consensus 283 ~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 323 (441)
T 2hxt_A 283 LGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQI 323 (441)
T ss_dssp HHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 66667766432599999999999999999998 67998876
No 208
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.21 E-value=0.058 Score=48.85 Aligned_cols=103 Identities=13% Similarity=0.150 Sum_probs=66.9
Q ss_pred cccccCC--HHH---HHHHHHHHhhcCCc-cEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcC
Q 023442 18 GVSLMLD--PKF---VGEAMSVIAANTNV-PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA 91 (282)
Q Consensus 18 Gs~Ll~~--p~~---~~eiv~~v~~~~~i-pvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~a 91 (282)
+..++++ ... +.+-++++++...- ++.|=+ ++++++.+ +.++|+|.|-++.-+
T Consensus 180 d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev-------~tlee~~e-----A~~aGaD~I~ld~~~--------- 238 (296)
T 1qap_A 180 DAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEV-------ENLDELDD-----ALKAGADIIMLDNFN--------- 238 (296)
T ss_dssp SCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEE-------SSHHHHHH-----HHHTTCSEEEESSCC---------
T ss_pred cEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEe-------CCHHHHHH-----HHHcCCCEEEECCCC---------
Confidence 4445553 333 34566666665532 444422 23444322 236899999887521
Q ss_pred CcCCCCCccHHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 92 ENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 92 d~~~i~~~~~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+.+.+.++.. .+++|.++||| |.+.+.++.++|+|++.+|.....-|++
T Consensus 239 ---------~e~l~~~v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~~~ 289 (296)
T 1qap_A 239 ---------TDQMREAVKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHVRAL 289 (296)
T ss_dssp ---------HHHHHHHHHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEEECC
T ss_pred ---------HHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCC
Confidence 34455555433 36899999999 9999999999999999999866666654
No 209
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.18 E-value=0.0062 Score=54.55 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=59.3
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++.+++.|+++|.|..-..+++|. .+.+.++.+. +++||+..+-|.+..++..+.+.|||+|.++-
T Consensus 77 ~A~~y~~~GA~~isvltd~~~f~Gs------------~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 77 LAQAYQDGGARIVSVVTEQRRFQGS------------LDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp HHHHHHHTTCSEEEEECCGGGHHHH------------HHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred HHHHHHHcCCCEEEEecChhhcCCC------------HHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcCCCEEEEec
Confidence 4567789999999998755555553 4566666554 68999999989999999999999999999998
Q ss_pred HhhhCCcc
Q 023442 144 AAYQNPWY 151 (282)
Q Consensus 144 gal~nP~i 151 (282)
+.+.+..+
T Consensus 144 a~l~~~~l 151 (272)
T 3qja_A 144 AALEQSVL 151 (272)
T ss_dssp GGSCHHHH
T ss_pred ccCCHHHH
Confidence 87765543
No 210
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.17 E-value=0.12 Score=44.79 Aligned_cols=106 Identities=11% Similarity=0.205 Sum_probs=65.4
Q ss_pred HHHHHH---HHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCC-CCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 28 VGEAMS---VIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 28 ~~eiv~---~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~G-v~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
+.++++ .+++. +.-+.+-+..+... +.+ ..+ .+.| +|.+.+.+-...+.|. ...|..++-
T Consensus 100 ~~~~i~~~~~i~~~-G~k~gvalnp~tp~-~~~-------~~~-l~~g~~D~VlvmsV~pGf~gq------~f~~~~l~k 163 (227)
T 1tqx_A 100 TERCIQLAKEIRDN-NLWCGISIKPKTDV-QKL-------VPI-LDTNLINTVLVMTVEPGFGGQ------SFMHDMMGK 163 (227)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEEECTTSCG-GGG-------HHH-HTTTCCSEEEEESSCTTCSSC------CCCGGGHHH
T ss_pred HHHHHHHHHHHHHc-CCeEEEEeCCCCcH-HHH-------HHH-hhcCCcCEEEEeeeccCCCCc------ccchHHHHH
Confidence 445666 77664 55555544332211 111 122 2455 9999554432211221 112334666
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
++++.+...+++|..-||| +.+.+.++.+.|+|.+.+|+++++.+.
T Consensus 164 i~~lr~~~~~~~I~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 164 VSFLRKKYKNLNIQVDGGL-NIETTEISASHGANIIVAGTSIFNAED 209 (227)
T ss_dssp HHHHHHHCTTCEEEEESSC-CHHHHHHHHHHTCCEEEESHHHHTCSS
T ss_pred HHHHHHhccCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 6666654447899999999 589999999999999999999987665
No 211
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=96.16 E-value=0.024 Score=52.34 Aligned_cols=90 Identities=8% Similarity=0.003 Sum_probs=58.2
Q ss_pred HHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHH
Q 023442 29 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 107 (282)
Q Consensus 29 ~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l 107 (282)
.+.+++|++++ ++++.+...-+|+..+ .+ +.+.+++.|+.+|. + .+++-+++...++
T Consensus 170 ~~~v~avr~a~~~~~l~vDan~~~~~~~-----~~-~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l 227 (369)
T 2zc8_A 170 YEVLKAVREAFPEATLTADANSAYSLAN-----LA-QLKRLDELRLDYIE--------Q--------PLAYDDLLDHAKL 227 (369)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGG-----HH-HHHGGGGGCCSCEE--------C--------CSCTTCSHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEecCCCCCHHH-----HH-HHHHHHhCCCcEEE--------C--------CCCcccHHHHHHH
Confidence 34455555554 4566666666665422 22 23345666666664 1 1122346666677
Q ss_pred HhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 108 LRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 108 ~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
.+. .++||.+.+.++|+++++++++ ..||.|++
T Consensus 228 ~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 228 QRE-LSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp HHH-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred Hhh-CCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 665 5799999999999999999998 66998877
No 212
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=96.11 E-value=0.039 Score=51.72 Aligned_cols=96 Identities=9% Similarity=0.045 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
|+...+.+++||+++ ++++.++..-+|+. .+..+ +++.+++.|+.+|. +. +++-+++
T Consensus 182 ~~~~~~~v~avReavG~d~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------eP--------~~~~d~~ 240 (388)
T 3tcs_A 182 PGRTEEIIPTMRRELGDDVDLLIDANSCYTP----DRAIE-VGHMLQDHGFCHFE--------EP--------CPYWELA 240 (388)
T ss_dssp TTHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHHHTTCCEEE--------CC--------SCTTCHH
T ss_pred hhHHHHHHHHHHHHhCCCCeEEEeCCCCcCH----HHHHH-HHHHHhhcCCeEEE--------CC--------CCccCHH
Confidence 556677888888876 67888888888864 23233 45667888887773 11 1222467
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
...++.+. .++||.++..+.|.+++.++++ ..||.|.+-
T Consensus 241 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 280 (388)
T 3tcs_A 241 QTKQVTDA-LDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPD 280 (388)
T ss_dssp HHHHHHHH-CSSCEEECTTCCCHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHHh-cCCCEEcCCccCCHHHHHHHHHcCCCCEEEeC
Confidence 77777765 5899999999999999999998 678988654
No 213
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=96.10 E-value=0.0085 Score=53.62 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
.+.+.++++ ..++||+..|||.|++++.++ .|||||++|.++...
T Consensus 191 ~~~v~~vr~-~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 191 KDLVRRIKA-RTALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHHHHT-TCCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHH
T ss_pred HHHHHHHHh-hcCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcc
Confidence 456666655 468999999999999999997 699999999887643
No 214
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.07 E-value=0.0094 Score=51.83 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=50.5
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEecHHhh
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAY 146 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmIGRgal 146 (282)
+.+.|+|.|-+|+-. . .| ..++++++....+++|+++.||| |++.+.++++. |+++|. |+++.
T Consensus 126 A~~~Gad~vk~Fpa~-~-~g------------G~~~lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~ 189 (224)
T 1vhc_A 126 ALEMGISAVKFFPAE-A-SG------------GVKMIKALLGPYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFV 189 (224)
T ss_dssp HHHTTCCEEEETTTT-T-TT------------HHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGG
T ss_pred HHHCCCCEEEEeeCc-c-cc------------CHHHHHHHHhhCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-Echhc
Confidence 357889988886611 0 00 14667777766668999999999 77999999995 999999 88776
Q ss_pred hCCcc
Q 023442 147 QNPWY 151 (282)
Q Consensus 147 ~nP~i 151 (282)
..+.+
T Consensus 190 ~~~~i 194 (224)
T 1vhc_A 190 EKKLI 194 (224)
T ss_dssp CHHHH
T ss_pred Ccchh
Confidence 66654
No 215
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=96.05 E-value=0.05 Score=50.75 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.|+.+|. + .+++-+++
T Consensus 177 ~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------q--------P~~~~d~~ 235 (382)
T 3dgb_A 177 VDRDLAHVIAIKKALGDSASVRVDVNQAWDE----AVALR-ACRILGGNGIDLIE--------Q--------PISRNNRA 235 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGSEEEEECTTCBCH----HHHHH-HHHHHHTTTCCCEE--------C--------CBCTTCHH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCH----HHHHH-HHHHHhhcCcCeee--------C--------CCCccCHH
Confidence 444455566666655 35666666666643 12222 34455666666552 1 12233477
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
...++.+. .++||.+...+.|.+|+.++++ ..||.|++--+-.
T Consensus 236 ~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~ 279 (382)
T 3dgb_A 236 GMVRLNAS-SPAPIMADESIECVEDAFNLAREGAASVFALKIAKN 279 (382)
T ss_dssp HHHHHHHH-CSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeccccc
Confidence 77777765 5899999999999999999998 7799998764443
No 216
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.04 E-value=0.037 Score=48.12 Aligned_cols=50 Identities=24% Similarity=0.361 Sum_probs=41.9
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.++.++++++...+++|..-||| +++.+.++.+.|||.+.+||++...+.
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~d 205 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSED 205 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSC
T ss_pred HHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 35667777665567999999999 589999999999999999999887665
No 217
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.02 E-value=0.022 Score=51.01 Aligned_cols=74 Identities=14% Similarity=0.047 Sum_probs=57.7
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++.++++|+++|.|-.-..+++|. .+.+..+.+ .+++||+..+.|.++.++.++...|||+|.++-
T Consensus 84 ~A~~y~~~GA~~IsVltd~~~f~Gs------------~~~L~~ir~-~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 84 LAKAYEEGGAACLSVLTDTPSFQGA------------PEFLTAARQ-ACSLPALRKDFLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHTTCSEEEEECCSTTTCCC------------HHHHHHHHH-TSSSCEEEESCCCSTHHHHHHHHTTCSEEEEET
T ss_pred HHHHHHHCCCCEEEEeccccccCCC------------HHHHHHHHH-hcCCCEEECCccCCHHHHHHHHHcCCCEEEEcc
Confidence 4567789999999987644444453 566666655 468999999999999999999999999999998
Q ss_pred HhhhCCc
Q 023442 144 AAYQNPW 150 (282)
Q Consensus 144 gal~nP~ 150 (282)
.++.+..
T Consensus 151 a~L~~~~ 157 (272)
T 3tsm_A 151 ASVDDDL 157 (272)
T ss_dssp TTSCHHH
T ss_pred cccCHHH
Confidence 8775444
No 218
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=96.01 E-value=0.089 Score=48.07 Aligned_cols=100 Identities=13% Similarity=0.068 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCC--EEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR--HFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~--~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+++...+++++|+++- ++++.+...-+|+. ++..++ ++.+++.|++ +|. +. +++-+
T Consensus 165 ~~~~d~~~v~avr~~g~~~~l~vDan~~~~~----~~a~~~-~~~l~~~~i~~~~iE--------~P--------~~~~~ 223 (345)
T 2zad_A 165 NLKEDIEAVEEIAKVTRGAKYIVDANMGYTQ----KEAVEF-ARAVYQKGIDIAVYE--------QP--------VRRED 223 (345)
T ss_dssp CHHHHHHHHHHHHHHSTTCEEEEECTTCSCH----HHHHHH-HHHHHHTTCCCSEEE--------CC--------SCTTC
T ss_pred CHHHHHHHHHHHHhhCCCCeEEEECCCCCCH----HHHHHH-HHHHHhcCCCeeeee--------CC--------CCccc
Confidence 5666677788888762 36677766666642 343443 4567788888 663 11 12234
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe--cHHh
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV--GRAA 145 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI--GRga 145 (282)
++...++.+. .++||.+.+.+.|+++++++++ ..||.|++ +||-
T Consensus 224 ~~~~~~l~~~-~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GG 270 (345)
T 2zad_A 224 IEGLKFVRFH-SPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSG 270 (345)
T ss_dssp HHHHHHHHHH-SSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHH
T ss_pred HHHHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccccc
Confidence 7777777665 4899999999999999999998 67999998 5544
No 219
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=95.96 E-value=0.062 Score=48.01 Aligned_cols=95 Identities=13% Similarity=0.209 Sum_probs=62.0
Q ss_pred HHHHHHHhhcCC--ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH-HH
Q 023442 29 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY-YY 105 (282)
Q Consensus 29 ~eiv~~v~~~~~--ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~-i~ 105 (282)
.+-++++++... .++.+=+ ++++++.+ . .++|+|.|-++.-+ +. .... +.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev-------~tlee~~~----A-~~aGaD~I~ld~~~-------~~--------~l~~~v~ 221 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC-------ESFEEAKN----A-MNAGADIVMCDNLS-------VL--------ETKEIAA 221 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE-------SSHHHHHH----H-HHHTCSEEEEETCC-------HH--------HHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEc-------CCHHHHHH----H-HHcCCCEEEECCCC-------HH--------HHHHHHH
Confidence 456667666653 3444422 23444322 2 35799999987521 11 1121 12
Q ss_pred HHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 106 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 106 ~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+...++++||.++||| |++.+.++.++|+|++.+|......|++
T Consensus 222 ~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 222 YRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQATFI 266 (273)
T ss_dssp HHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCCCC
T ss_pred HhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCCCC
Confidence 22223567999999999 9999999999999999999988777775
No 220
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.95 E-value=0.007 Score=52.23 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=49.6
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEecHHhhh
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQ 147 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmIGRgal~ 147 (282)
.+.|+|.+-+|+-. . .| ..++++++...++++|+++.||| |++.+.++++. |+++|. |+++..
T Consensus 126 ~~~Gad~v~~Fpa~-~-~g------------G~~~lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 126 MDYGLKEFKFFPAE-A-NG------------GVKALQAIAGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp HHTTCCEEEETTTT-T-TT------------HHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSC
T ss_pred HHCCCCEEEEecCc-c-cc------------CHHHHHHHhhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccC
Confidence 46788888776511 0 00 14667777766668999999999 67999999995 999999 887766
Q ss_pred CCcc
Q 023442 148 NPWY 151 (282)
Q Consensus 148 nP~i 151 (282)
.+.+
T Consensus 190 ~~~~ 193 (214)
T 1wbh_A 190 ADAL 193 (214)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 6654
No 221
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=95.93 E-value=0.08 Score=49.34 Aligned_cols=99 Identities=5% Similarity=0.026 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHh--CCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~--~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+++.-.+.+++|++++ ++++.+...-+|+. .+..+ +++.+++ .|+.+|. + .+++-
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~----~~A~~-~~~~l~~~~~~l~~iE--------e--------P~~~~ 226 (379)
T 3r0u_A 168 DFNRDIQLLKALDNEFSKNIKFRFDANQGWNL----AQTKQ-FIEEINKYSLNVEIIE--------Q--------PVKYY 226 (379)
T ss_dssp CHHHHHHHHHHHHHHCCTTSEEEEECTTCCCH----HHHHH-HHHHHHTSCCCEEEEE--------C--------CSCTT
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCH----HHHHH-HHHHHhhcCCCcEEEE--------C--------CCCcc
Confidence 4556667777777776 46777777777753 22222 3456666 5555553 1 11222
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHH
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRA 144 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRg 144 (282)
+++...++.+. .++||.++..+.|.+|+.++++ ..+|.|.+--+
T Consensus 227 d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 271 (379)
T 3r0u_A 227 DIKAMAEITKF-SNIPVVADESVFDAKDAERVIDEQACNMINIKLA 271 (379)
T ss_dssp CHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHH
T ss_pred cHHHHHHHHhc-CCCCEEeCCccCCHHHHHHHHHcCCCCEEEECcc
Confidence 46777777765 5799999999999999999999 56898877533
No 222
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=95.89 E-value=0.0079 Score=67.23 Aligned_cols=79 Identities=9% Similarity=0.065 Sum_probs=54.0
Q ss_pred HHhCCCCEEE---EecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHH-----------H
Q 023442 68 SSLSPTRHFI---IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL-----------R 133 (282)
Q Consensus 68 le~~Gv~~i~---VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l-----------~ 133 (282)
+.++|+|.|+ +-|... .|..+. ..+...-...+.++++ ..++|||+.|||.|.+|+.+++ .
T Consensus 712 l~~aG~D~iV~~q~~G~ea--GGH~g~--~d~~~~~l~lv~~i~~-~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~pa 786 (2060)
T 2uva_G 712 IAKANPTFPIILQWTGGRG--GGHHSF--EDFHQPILLMYSRIRK-CSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPP 786 (2060)
T ss_dssp HHHHCTTSCEEEEECCTTS--SSSCCS--CCSHHHHHHHHHHHHT-STTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCC
T ss_pred HHHcCCCEEEEeeeEcccC--CCCCCc--ccccchHHHHHHHHHH-HcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCC
Confidence 3578999888 554321 222110 0010111445566655 4589999999999999999999 7
Q ss_pred cCCCEEEecHHhhhCCcc
Q 023442 134 KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 134 ~g~DgVmIGRgal~nP~i 151 (282)
.|||||++|+.++.-..-
T Consensus 787 lGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 787 MPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp CCCSCEEESGGGGGBTTS
T ss_pred CCCCEEEEchhhhcCcCC
Confidence 899999999999876543
No 223
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.85 E-value=0.014 Score=56.39 Aligned_cols=63 Identities=24% Similarity=0.269 Sum_probs=48.9
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
.+.++|++.|.++... |.+ +.-++.+.++++.++++||++ |++.|.++++.+.+.|||+|.+|
T Consensus 236 ~l~~aG~d~I~id~a~----g~~--------~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 236 ALVAAGVDVVVVDTAH----GHS--------KGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHTTCSEEEEECSC----CSB--------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHhhcccceEEecccC----Ccc--------hhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 4457899999998643 211 112566778877777899987 88999999999999999999985
No 224
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=95.83 E-value=0.02 Score=48.71 Aligned_cols=38 Identities=16% Similarity=0.395 Sum_probs=34.0
Q ss_pred CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 113 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
++||++.|||+ ++++.++++.|+|+|.+||+++..+..
T Consensus 170 ~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~ 207 (220)
T 2fli_A 170 SFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDL 207 (220)
T ss_dssp CCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred CceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCH
Confidence 68999999998 899999888999999999999887663
No 225
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=95.81 E-value=0.043 Score=51.70 Aligned_cols=97 Identities=11% Similarity=-0.047 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++...+.+++|++++ ++++.|...-+|+. ++..+ +++.+++.|+++|.-- . +++-+++
T Consensus 196 ~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEqP--------~-------~~~~~~~ 255 (410)
T 3dip_A 196 LKDGLEPFRKIRAAVGQRIEIMCELHSLWGT----HAAAR-ICNALADYGVLWVEDP--------I-------AKMDNIP 255 (410)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCBCH----HHHHH-HHHHGGGGTCSEEECC--------B-------SCTTCHH
T ss_pred HHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEECC--------C-------CCcccHH
Confidence 456778899999987 57888888777754 33333 4567888899888510 0 0112356
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
...++.+. .++||.+.+.+.|+++++++++ ..+|.|.+=
T Consensus 256 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 256 AVADLRRQ-TRAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp HHHHHHHH-HCCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 66666664 5899999999999999999999 568988763
No 226
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=95.81 E-value=0.073 Score=49.73 Aligned_cols=104 Identities=8% Similarity=0.002 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHhhcC--CccEE-EEecCCCCCCCcHHHHHHHHHHHHHhCCC--CEEEEecCCcccCCCCcCCcCCCCC
Q 023442 24 DPKFVGEAMSVIAANT--NVPVS-VKCRIGVDDHDSYNQLCDFIYKVSSLSPT--RHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvs-vKiR~G~d~~~~~~e~~~~v~~~le~~Gv--~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
+++.-.+.+++|++++ ++++. +...-+|+. ++..+ +++.+++.|+ .+|. +. +++
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~----~~A~~-~~~~l~~~~i~~~~iE--------qP--------~~~ 226 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNW----KDAHR-AIKRLTKYDLGLEMIE--------SP--------APR 226 (391)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCH----HHHHH-HHHHHTTCCSSCCEEE--------CC--------SCT
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCH----HHHHH-HHHHHHhcCCCcceec--------CC--------CCh
Confidence 6777788888888876 57888 888878853 23333 4567788888 7774 11 112
Q ss_pred ccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCcc
Q 023442 99 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~i 151 (282)
-+++...++.+. .++|| .+.+.|+++++++++ ..||.|++--+-.+...-
T Consensus 227 ~d~~~~~~l~~~-~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~ 277 (391)
T 3gd6_A 227 NDFDGLYQLRLK-TDYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTS 277 (391)
T ss_dssp TCHHHHHHHHHH-CSSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred hhHHHHHHHHHH-cCCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHH
Confidence 237777777765 57999 889999999999998 779999998777766553
No 227
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.0069 Score=53.82 Aligned_cols=74 Identities=15% Similarity=0.049 Sum_probs=57.7
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++.+++.|++.+++--=+ + .+.+.+.+++++ ..+||...|||++. |+++++ .|||-|.+|.
T Consensus 43 ~A~~~~~~Ga~~l~vvDL~----~-----------~n~~~i~~i~~~-~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs 104 (260)
T 2agk_A 43 YAKLYKDRDVQGCHVIKLG----P-----------NNDDAAREALQE-SPQFLQVGGGINDT-NCLEWL-KWASKVIVTS 104 (260)
T ss_dssp HHHHHHHTTCTTCEEEEES----S-----------SCHHHHHHHHHH-STTTSEEESSCCTT-THHHHT-TTCSCEEECG
T ss_pred HHHHHHHcCCCEEEEEeCC----C-----------CCHHHHHHHHhc-CCceEEEeCCCCHH-HHHHHh-cCCCEEEECc
Confidence 3556788999988773211 1 126777788776 47999999999987 999999 9999999999
Q ss_pred HhhhC-----Cccchhhh
Q 023442 144 AAYQN-----PWYTLGHV 156 (282)
Q Consensus 144 gal~n-----P~if~~~~ 156 (282)
.++.| |.++ .++
T Consensus 105 ~a~~~~g~~~p~~~-~~~ 121 (260)
T 2agk_A 105 WLFTKEGHFQLKRL-ERL 121 (260)
T ss_dssp GGBCTTCCBCHHHH-HHH
T ss_pred HHHhhcCCCCHHHH-HHH
Confidence 99999 9874 444
No 228
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=95.74 E-value=0.13 Score=47.87 Aligned_cols=101 Identities=6% Similarity=-0.098 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.|+.+|. + .+++-+++
T Consensus 176 ~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~-~~~~l~~~~i~~iE--------e--------P~~~~d~~ 234 (381)
T 3fcp_A 176 LATDLRHTRAIVEALGDRASIRVDVNQAWDA----ATGAK-GCRELAAMGVDLIE--------Q--------PVSAHDNA 234 (381)
T ss_dssp HHHHHHHHHHHHHHTCTTCEEEEECTTCBCH----HHHHH-HHHHHHHTTCSEEE--------C--------CBCTTCHH
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HHHHH-HHHHHhhcCcccee--------C--------CCCcccHH
Confidence 444455566666655 35566666555542 12222 23455566665552 1 12233477
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQ 147 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~ 147 (282)
...++.+. .++||.+...+.|..|+.++++ ..+|.|++--+-.+
T Consensus 235 ~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~G 279 (381)
T 3fcp_A 235 ALVRLSQQ-IETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAG 279 (381)
T ss_dssp HHHHHHHH-SSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHh-CCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccC
Confidence 77777765 5899999999999999999998 67999987544433
No 229
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=95.73 E-value=0.085 Score=46.15 Aligned_cols=105 Identities=13% Similarity=0.064 Sum_probs=63.5
Q ss_pred HHHHHHHHHhhcC---CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 27 FVGEAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 27 ~~~eiv~~v~~~~---~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
.+.+-+.++++.+ +.|+ |+=+-.... +-+++. ...+++.++|+|+|-.+... .+..++. .+.
T Consensus 117 ~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L-~~e~i~-~a~ria~eaGADfVKTsTG~---~~~~gAt--------~~d 181 (234)
T 1n7k_A 117 AVYREVSGIVKLAKSYGAVV--KVILEAPLW-DDKTLS-LLVDSSRRAGADIVKTSTGV---YTKGGDP--------VTV 181 (234)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EEECCGGGS-CHHHHH-HHHHHHHHTTCSEEESCCSS---SCCCCSH--------HHH
T ss_pred HHHHHHHHHHHHHhhcCCeE--EEEEeccCC-CHHHHH-HHHHHHHHhCCCEEEeCCCC---CCCCCCC--------HHH
Confidence 4555556666654 3555 542211111 123433 46778889999999665311 1101111 222
Q ss_pred HHH--HHhcCCCceEEEccCCCCHHHHHHHHHcCCC--EEEecHHhhh
Q 023442 104 YYA--LLRDFPDLTFTLNGGINTVDEVNAALRKGAH--HVMVGRAAYQ 147 (282)
Q Consensus 104 i~~--l~~~~~~ipVi~nGdI~s~eda~~~l~~g~D--gVmIGRgal~ 147 (282)
+.- +.+.. .+||-+.|||.|.+|+.++++.|++ |+..||.++.
T Consensus 182 v~l~~m~~~v-~v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 182 FRLASLAKPL-GMGVKASGGIRSGIDAVLAVGAGADIIGTSSAVKVLE 228 (234)
T ss_dssp HHHHHHHGGG-TCEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHHH
T ss_pred HHHHHHHHHH-CCCEEEecCCCCHHHHHHHHHcCccccchHHHHHHHH
Confidence 222 33322 3999999999999999999999999 8888887654
No 230
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.70 E-value=0.022 Score=48.94 Aligned_cols=38 Identities=21% Similarity=0.480 Sum_probs=34.0
Q ss_pred CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 113 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
++|+++-|||+ ++.+.++++.|+|+|.+|+++...+..
T Consensus 179 ~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp 216 (230)
T 1rpx_A 179 NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDY 216 (230)
T ss_dssp CCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred CceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCH
Confidence 78999999997 899988888999999999999887663
No 231
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=95.65 E-value=0.018 Score=51.06 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=37.2
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
+.+.++.+. .++||+..|||.|++++.+ +..|||+|++|+++...
T Consensus 196 ~~v~~vr~~-~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 196 KKVEEYREL-CDKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp HHHHHHHHH-CCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred HHHHHHHhh-cCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 456666554 4899999999999999999 56689999999998754
No 232
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=95.64 E-value=0.018 Score=50.03 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=42.4
Q ss_pred CCccHHHHHHHHhcC----CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 97 PPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~----~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+...+.++++.+.. .++||.+-|||+. +.+.++.+.|||+|.+|++++..|..
T Consensus 153 ~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 153 IPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNY 210 (230)
T ss_dssp CGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCH
T ss_pred cHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCH
Confidence 344466665554432 2799999999976 99999999999999999999987774
No 233
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=95.61 E-value=0.054 Score=45.98 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=48.3
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCH-HHHHHHHHcCCCEE
Q 023442 61 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DEVNAALRKGAHHV 139 (282)
Q Consensus 61 ~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~-eda~~~l~~g~DgV 139 (282)
+..++++..+.|++.+.+.+.+ .+.+.++.+..+.-+++..|||..- .++.++++.|+|++
T Consensus 121 v~~~~~~a~~~G~~G~~~~~~~------------------~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~v 182 (208)
T 2czd_A 121 TDRFIEVANEIEPFGVIAPGTR------------------PERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYI 182 (208)
T ss_dssp HHHHHHHHHHHCCSEEECCCSS------------------THHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCcEEEECCCC------------------hHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEE
Confidence 3445666778888887655421 1233344443333356799999752 27888888899999
Q ss_pred EecHHhhhCCc
Q 023442 140 MVGRAAYQNPW 150 (282)
Q Consensus 140 mIGRgal~nP~ 150 (282)
.+||+++..+.
T Consensus 183 vvGr~I~~a~d 193 (208)
T 2czd_A 183 IVGRAIYNAPN 193 (208)
T ss_dssp EECHHHHTSSS
T ss_pred EEChHHhcCCC
Confidence 99999987654
No 234
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.55 E-value=0.018 Score=55.82 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=48.9
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
.+.++|++.|.++... |.+ +.-++.+.++++.++++||++ |++.+.++++.+.+.|||+|.+|
T Consensus 238 ~l~~aG~d~I~id~a~----g~~--------~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 238 ALVEAGVDVLLIDSSH----GHS--------EGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHTTCSEEEEECSC----TTS--------HHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHhccCceEEecccc----ccc--------hHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 3457899999998653 211 112566778877777899987 88999999999999999999986
No 235
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.51 E-value=0.0065 Score=52.90 Aligned_cols=49 Identities=18% Similarity=0.246 Sum_probs=40.3
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCcc
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~i 151 (282)
.++++++...++++|+++.||| |++.+.++++ .|+++|. |+++...+.+
T Consensus 154 ~~~lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 154 VAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred HHHHHHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 4667777666668999999999 7899999999 8999999 9877665554
No 236
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.49 E-value=0.017 Score=48.96 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=34.8
Q ss_pred HHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 107 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 107 l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
++++..++|||+.|.|.|.||+.+ ++.|||+|+-+.--|.+-
T Consensus 143 ~I~~v~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 143 VARKIPGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp HHTTSTTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred HHHHhcCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 334335789999999999999999 999999999997666543
No 237
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=95.49 E-value=0.043 Score=51.49 Aligned_cols=95 Identities=13% Similarity=-0.069 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.+++|++++ ++++.+...-+|+. ++..+ +++.+++.|+++|.-= . ++-+++
T Consensus 193 ~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEeP--------~--------~~~~~~ 251 (400)
T 4dxk_A 193 LKSALEPFEKIRKAVGDKMDIMVEFHSMWQL----LPAMQ-IAKALTPYQTFWHEDP--------I--------KMDSLS 251 (400)
T ss_dssp HHHHHHHHHHHHHHHGGGSEEEEECTTCBCH----HHHHH-HHHHTGGGCCSEEECC--------B--------CTTSGG
T ss_pred HHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHH-HHHHHhhcCCCEEEcC--------C--------CcccHH
Confidence 566778899999987 57888887777753 33333 4567888899888610 0 111244
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
...++.+. .++||.+.+.+.|+++++++++ ..+|.|.+
T Consensus 252 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 252 SLTRYAAV-SPAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp GHHHHHHH-CSSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 44566554 5899999999999999999999 56898876
No 238
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.39 E-value=0.023 Score=51.07 Aligned_cols=109 Identities=10% Similarity=0.093 Sum_probs=66.1
Q ss_pred ccccccCCHH---HHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCc
Q 023442 17 FGVSLMLDPK---FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAEN 93 (282)
Q Consensus 17 yGs~Ll~~p~---~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~ 93 (282)
+|..+-.+.+ .+.+-+++|+++++ ...+|+=+-.....+ ++......+++.++|+|+|-.+..... .|-+..
T Consensus 129 ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d-~e~i~~A~~ia~eaGADfVKTSTGf~~-~gAT~e-- 203 (281)
T 2a4a_A 129 YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKT-EDLIIKTTLAVLNGNADFIKTSTGKVQ-INATPS-- 203 (281)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCS-HHHHHHHHHHHHTTTCSEEECCCSCSS-CCCCHH--
T ss_pred hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCc-HHHHHHHHHHHHHhCCCEEEeCCCCCC-CCCCHH--
Confidence 4554555677 88888899998874 245565332111011 232334567888999999976532110 121111
Q ss_pred CCCCCccHHHHHHHHhc--------CCCceEEEccCCCCHHHHHHHHHcCC
Q 023442 94 RTIPPLKYEYYYALLRD--------FPDLTFTLNGGINTVDEVNAALRKGA 136 (282)
Q Consensus 94 ~~i~~~~~~~i~~l~~~--------~~~ipVi~nGdI~s~eda~~~l~~g~ 136 (282)
.-..+.+.+++ ...++|-++|||.|.+|+.++++.|+
T Consensus 204 ------dv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga 248 (281)
T 2a4a_A 204 ------SVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLAR 248 (281)
T ss_dssp ------HHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhh
Confidence 13334455432 24799999999999999999998543
No 239
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.31 E-value=0.037 Score=54.17 Aligned_cols=79 Identities=13% Similarity=-0.019 Sum_probs=53.0
Q ss_pred HHhCC---CCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-----CCCceEEEccCCCCHHHHHHHHH------
Q 023442 68 SSLSP---TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-----FPDLTFTLNGGINTVDEVNAALR------ 133 (282)
Q Consensus 68 le~~G---v~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-----~~~ipVi~nGdI~s~eda~~~l~------ 133 (282)
+.+.| +|+|.+.+=..... ......+++.++.+.++.+. ..++||++-||| +++++.++++
T Consensus 124 A~~~G~~~aDYv~~Gpvf~T~t----K~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g 198 (540)
T 3nl6_A 124 LSKMGPDMVDYIGVGTLFPTLT----KKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSN 198 (540)
T ss_dssp HHHTCC--CCEEEESCCSCCCC----CC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTT
T ss_pred HHHcCCCCCCEEEEcCCCCCCC----CCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccc
Confidence 45678 89988843111000 01000034456766666543 147999999999 8999999997
Q ss_pred --cCCCEEEecHHhhhCCcc
Q 023442 134 --KGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~i 151 (282)
.|+|||.++++++..+..
T Consensus 199 ~~~GadgvAVvsaI~~a~dp 218 (540)
T 3nl6_A 199 GKRSLDGICVVSDIIASLDA 218 (540)
T ss_dssp SSCBCSCEEESHHHHTCTTH
T ss_pred cccCceEEEEeHHHhcCCCH
Confidence 689999999999986664
No 240
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.27 E-value=0.026 Score=54.65 Aligned_cols=64 Identities=16% Similarity=0.258 Sum_probs=49.0
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
.+.++|++.|.+|.-- |.. ...++.+.++++..+++||++ |+|.|.++++.+.+.|+|+|.+|-
T Consensus 262 ~~~~aG~d~v~i~~~~----G~~--------~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 262 LLTQAGVDVIVLDSSQ----GNS--------VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHTTCSEEEECCSC----CCS--------HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHcCCCEEEeeccC----Ccc--------hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECC
Confidence 4567999999998732 221 112577777777666899976 789999999999999999998854
No 241
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=95.18 E-value=0.18 Score=43.77 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=68.3
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-----ccCCCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-----LLNGISPA 91 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-----~~~G~~~a 91 (282)
+|..+-.+.+.+.+-++++++.++- ..+|+=+-.... +-+++. .+.+++.++|+|+|-.+.... ...|..
T Consensus 89 ig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~-~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~-- 163 (226)
T 1vcv_A 89 IGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERY-TLYDIIAEAGAHFIKSSTGFAEEAYAARQGNP-- 163 (226)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHH-HHHHHHHHHTCSEEECCCSCCCHHHHHHTTCC--
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHH-HHHHHHHHcCCCEEEeCCCCCccccccccCCC--
Confidence 4655567888899999999988742 255632211111 223433 456788899999997663211 000100
Q ss_pred CcCCCCCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHc---CCC
Q 023442 92 ENRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRK---GAH 137 (282)
Q Consensus 92 d~~~i~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~---g~D 137 (282)
.+.+.. .-..+++.++. ..+++|-++|||+|.+|+.++++. |++
T Consensus 164 ~gAt~~--dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 164 VHSTPE--RAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp SSCCHH--HHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred CCCCHH--HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 000100 12334444333 246999999999999999999996 877
No 242
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.14 E-value=0.069 Score=46.20 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=59.4
Q ss_pred ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEcc
Q 023442 41 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 120 (282)
Q Consensus 41 ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nG 120 (282)
.|+..=+|. ++.+.... +++.+.+.|+..|.|.-|+.. ..+.|+++++++++ ++|+.|
T Consensus 13 ~~vi~Vir~--~~~~~a~~----~a~al~~gGi~~iEvt~~t~~---------------a~~~I~~l~~~~p~-~~IGAG 70 (217)
T 3lab_A 13 KPLIPVIVI--DDLVHAIP----MAKALVAGGVHLLEVTLRTEA---------------GLAAISAIKKAVPE-AIVGAG 70 (217)
T ss_dssp CSEEEEECC--SCGGGHHH----HHHHHHHTTCCEEEEETTSTT---------------HHHHHHHHHHHCTT-SEEEEE
T ss_pred CCEEEEEEc--CCHHHHHH----HHHHHHHcCCCEEEEeCCCcc---------------HHHHHHHHHHHCCC-CeEeec
Confidence 355555674 33333333 456677999999999887631 16778888887766 689999
Q ss_pred CCCCHHHHHHHHHcCCCEEEe
Q 023442 121 GINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 121 dI~s~eda~~~l~~g~DgVmI 141 (282)
-|.|.++++++++.|++.++.
T Consensus 71 TVlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 71 TVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp CCCSHHHHHHHHHHTCSEEEE
T ss_pred cccCHHHHHHHHHcCCCEEEe
Confidence 999999999999999999976
No 243
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.14 E-value=0.009 Score=51.28 Aligned_cols=105 Identities=16% Similarity=0.142 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEec-CCcccCCCCcCCcCCCCCccHHHH
Q 023442 26 KFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 26 ~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~-Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.+.++++.+++. ++.+.+.+ +|.. +.++.. .+.+.|++.+.+|. .+....|.. ..+..++.+
T Consensus 96 ~~~~~~~~~~~~~-g~~~~~d~-l~~~---T~~~~~-----~~~~~g~d~v~~~~~~~~~~~g~~------~~~~~l~~i 159 (218)
T 3jr2_A 96 ATIAACKKVADEL-NGEIQIEI-YGNW---TMQDAK-----AWVDLGITQAIYHRSRDAELAGIG------WTTDDLDKM 159 (218)
T ss_dssp HHHHHHHHHHHHH-TCEEEEEC-CSSC---CHHHHH-----HHHHTTCCEEEEECCHHHHHHTCC------SCHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCccceee-eecC---CHHHHH-----HHHHcCccceeeeeccccccCCCc------CCHHHHHHH
Confidence 3456666666654 44443322 3332 222221 22456999887753 222112221 011123445
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCC
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 149 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP 149 (282)
+++.. +++||+.-||| +++.+.++++.|||+|.+||++...+
T Consensus 160 ~~~~~--~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a~ 201 (218)
T 3jr2_A 160 RQLSA--LGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGAE 201 (218)
T ss_dssp HHHHH--TTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHHH
T ss_pred HHHhC--CCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCCC
Confidence 44443 48999999999 69999999989999999999876543
No 244
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.10 E-value=0.044 Score=49.70 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=48.3
Q ss_pred hCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH-HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 70 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY-YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 70 ~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~-i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
++|+|.|-++.-+ +. .... +..+...++++||.++||| |.+.+.++.++|+|++.+|......
T Consensus 215 ~aGaD~I~ld~~~-------~~--------~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a 278 (299)
T 2jbm_A 215 EAGADLVLLDNFK-------PE--------ELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQAA 278 (299)
T ss_dssp HTTCSEEEEESCC-------HH--------HHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHSC
T ss_pred HcCCCEEEECCCC-------HH--------HHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcCC
Confidence 6899999987621 11 1111 1222223567999999999 9999999999999999999977666
Q ss_pred Ccc
Q 023442 149 PWY 151 (282)
Q Consensus 149 P~i 151 (282)
|++
T Consensus 279 ~~~ 281 (299)
T 2jbm_A 279 PAL 281 (299)
T ss_dssp CCC
T ss_pred CCc
Confidence 775
No 245
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.08 E-value=0.024 Score=54.47 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=49.9
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+.+.++|+|.|.+|+- .|.. ...|+.+.++++..+++||+ .|+|.+.+++..+++.|+|+|.+|.
T Consensus 239 ~~l~~~G~d~ivi~~a----~g~~--------~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 239 EALFEAGADAIVIDTA----HGHS--------AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHTCSEEEECCS----CTTC--------HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHcCCCeEEEeee----cCcc--------hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 3456789999999972 1211 11266677777766689998 8999999999999999999999884
No 246
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.01 E-value=0.26 Score=45.04 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=58.3
Q ss_pred cCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEE
Q 023442 38 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 117 (282)
Q Consensus 38 ~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi 117 (282)
..+.|+.+.+..|++. ++ +.+.++.+|+++|.+|..... ...++........ -++.+.++.+. .++||+
T Consensus 114 ~~~~pv~~~i~~~~~~----~~----~~~~~~~~gad~i~i~~~~~~-~~~~~~~~~~~~~-~~~~i~~vr~~-~~~Pv~ 182 (349)
T 1p0k_A 114 NPNGLIFANLGSEATA----AQ----AKEAVEMIGANALQIHLNVIQ-EIVMPEGDRSFSG-ALKRIEQICSR-VSVPVI 182 (349)
T ss_dssp CSSSCEEEEEETTCCH----HH----HHHHHHHTTCSEEEEEECTTT-TC--------CTT-HHHHHHHHHHH-CSSCEE
T ss_pred CCCceeEEeecCCCCH----HH----HHHHHHhcCCCeEEecccchh-hhcCCCCCcchHH-HHHHHHHHHHH-cCCCEE
Confidence 4578998887655542 22 234567889999999964321 1111111111100 14667777655 489998
Q ss_pred Ec--cCCCCHHHHHHHHHcCCCEEEec
Q 023442 118 LN--GGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 118 ~n--GdI~s~eda~~~l~~g~DgVmIG 142 (282)
.- |...+.++++.+.+.|+|+|.+.
T Consensus 183 vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 183 VKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp EEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred EEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 75 55578999999888999999884
No 247
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=94.94 E-value=0.027 Score=50.08 Aligned_cols=118 Identities=13% Similarity=0.173 Sum_probs=71.2
Q ss_pred ccccccCCHHHHHHHHHHHhhcCC-ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~-ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
+|..+-.+.+.+.+-+++|++.++ -+..+|+=+-.....+ ++......+++.++|+|+|-.+..... .|-++.
T Consensus 108 ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d-~e~i~~a~~ia~eaGADfVKTSTGf~~-~gAt~e---- 181 (260)
T 1p1x_A 108 YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKD-EALIRKASEISIKAGADFIKTSTGKVA-VNATPE---- 181 (260)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCS-HHHHHHHHHHHHHTTCSEEECCCSCSS-CCCCHH----
T ss_pred HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCc-HHHHHHHHHHHHHhCCCEEEeCCCCCC-CCCCHH----
Confidence 465556678888888888888763 2345565331110011 242334567888999999976532110 111110
Q ss_pred CCCccHHHHHHHHhc---CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 96 IPPLKYEYYYALLRD---FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 96 i~~~~~~~i~~l~~~---~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
....+.+.+++ ...++|-++|||+|.+|+.++++.|+ -.|+..|+
T Consensus 182 ----~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga-------~~lG~~w~ 229 (260)
T 1p1x_A 182 ----SARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIAD-------ELFGADWA 229 (260)
T ss_dssp ----HHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHH-------HHHCTTSC
T ss_pred ----HHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhh-------hhcccccc
Confidence 12234444442 24799999999999999999998543 35677776
No 248
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.94 E-value=0.061 Score=48.48 Aligned_cols=104 Identities=19% Similarity=0.227 Sum_probs=65.1
Q ss_pred ccccccCCHHHH-----HHHHHHHhhcCC--ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC
Q 023442 17 FGVSLMLDPKFV-----GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGIS 89 (282)
Q Consensus 17 yGs~Ll~~p~~~-----~eiv~~v~~~~~--ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~ 89 (282)
+++.|+++.... .+-++.+++... .++.|=+ ++.++.. + +.++|+|.|-++.-+.
T Consensus 166 ~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev-------~t~eea~----e-A~~aGaD~I~ld~~~~------ 227 (286)
T 1x1o_A 166 FDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEV-------RSLEELE----E-ALEAGADLILLDNFPL------ 227 (286)
T ss_dssp SSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEE-------SSHHHHH----H-HHHHTCSEEEEESCCH------
T ss_pred ccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEe-------CCHHHHH----H-HHHcCCCEEEECCCCH------
Confidence 345566665432 334556665542 3444422 2344432 2 2367999999987321
Q ss_pred cCCcCCCCCccHHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 90 PAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 90 ~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+.+++.++.. .++|+++.||| |++.+.++.++|+|+|.+|.....-|++
T Consensus 228 ------------~~~k~av~~v~~~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 228 ------------EALREAVRRVGGRVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp ------------HHHHHHHHHHTTSSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCCCC
T ss_pred ------------HHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCCce
Confidence 1122222221 36899999999 7999999999999999999877766764
No 249
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=94.93 E-value=0.032 Score=49.42 Aligned_cols=43 Identities=21% Similarity=0.276 Sum_probs=35.5
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.++++ ..++||+..+||.|++++.++.+ +||||.+|.+++.
T Consensus 190 ~v~~vr~-~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 190 KVKEIRS-FTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHT-TCCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred HHHHHHH-hcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 4455544 46899999999999999998876 6999999998863
No 250
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.91 E-value=0.039 Score=53.06 Aligned_cols=64 Identities=25% Similarity=0.347 Sum_probs=48.7
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
..+.++|++.|.+|.-. |.. ...|+.+.++++..+++||+. |++.|.++++.+.+.|+|+|.+|
T Consensus 243 ~~l~~aGvd~v~i~~~~----G~~--------~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 243 EKLVKAGVDVIVIDTAH----GHS--------RRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHTTCSEEEECCSC----CSS--------HHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCEEEEEecC----Cch--------HHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 34568999999998632 221 112677878877766899876 78899999998888999999984
No 251
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.90 E-value=0.37 Score=44.41 Aligned_cols=102 Identities=17% Similarity=0.093 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCC---CCcHHHH-------------------------HHHHHHHHHhCCCC
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDD---HDSYNQL-------------------------CDFIYKVSSLSPTR 74 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~---~~~~~e~-------------------------~~~v~~~le~~Gv~ 74 (282)
..++.+.+.++.+++.++.|+.|.+=..... .....+. .....+++.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 5788899999999988877887765321111 0000000 01223456688999
Q ss_pred EEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe-cHH
Q 023442 75 HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GRA 144 (282)
Q Consensus 75 ~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI-GRg 144 (282)
.+.+|.... ..+.+.++.+ .+++|+. .+.|.+++..+.+.|+|+|.+ |+.
T Consensus 125 ~V~~~~g~~----------------~~~~i~~~~~--~g~~v~~--~v~t~~~a~~a~~~GaD~i~v~g~~ 175 (369)
T 3bw2_A 125 VVSFHFGVP----------------DREVIARLRR--AGTLTLV--TATTPEEARAVEAAGADAVIAQGVE 175 (369)
T ss_dssp EEEEESSCC----------------CHHHHHHHHH--TTCEEEE--EESSHHHHHHHHHTTCSEEEEECTT
T ss_pred EEEEeCCCC----------------cHHHHHHHHH--CCCeEEE--ECCCHHHHHHHHHcCCCEEEEeCCC
Confidence 999997321 1455555554 3677775 588999998888899999999 753
No 252
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=94.81 E-value=0.19 Score=43.57 Aligned_cols=48 Identities=19% Similarity=0.312 Sum_probs=40.0
Q ss_pred HHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 103 YYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 103 ~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.+.++++.. .+++|++-|+|.+.+|+..+.+.|+||+.||.+++.-+.
T Consensus 165 ~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~ 213 (225)
T 1hg3_A 165 NTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKD 213 (225)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSS
T ss_pred HHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcC
Confidence 344444543 368999999999999999998899999999999998877
No 253
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.76 E-value=0.074 Score=47.89 Aligned_cols=106 Identities=11% Similarity=0.150 Sum_probs=66.6
Q ss_pred cccccCCHHHH-----HHHHHHHhhcCC--ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCc
Q 023442 18 GVSLMLDPKFV-----GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP 90 (282)
Q Consensus 18 Gs~Ll~~p~~~-----~eiv~~v~~~~~--ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ 90 (282)
-+.|+++.... .+.++++++... .++.|=++ +.++..+ +.++|+|.|-++.-+.
T Consensus 164 d~vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~-------tleea~e-----A~~aGaD~I~LDn~~~------- 224 (285)
T 1o4u_A 164 GCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVE-------NLEDALR-----AVEAGADIVMLDNLSP------- 224 (285)
T ss_dssp -CEEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEES-------SHHHHHH-----HHHTTCSEEEEESCCH-------
T ss_pred ccEEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeC-------CHHHHHH-----HHHcCCCEEEECCCCH-------
Confidence 35567766543 345566665542 45555322 3444322 2468999999987321
Q ss_pred CCcCCCCCccHH-HHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 91 AENRTIPPLKYE-YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 91 ad~~~i~~~~~~-~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
. ... .+..+....+++|+.++||| |++.+.++.++|+|+|.+|.....-|++
T Consensus 225 e--------~l~~av~~l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 225 E--------EVKDISRRIKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp H--------HHHHHHHHHHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCCCC
T ss_pred H--------HHHHHHHHhhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCc
Confidence 0 011 22223222457999999999 7899998888999999999887777764
No 254
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.59 E-value=0.054 Score=52.60 Aligned_cols=65 Identities=18% Similarity=0.287 Sum_probs=48.6
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
.+.++|++.|.+..-. |.+ . --++.+.++++.++++||++ |+|.|.++++.+.+.|+|+|.+|-|
T Consensus 263 aLveaGvd~I~Id~a~----g~~-~-------~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~aGad~i~vg~g 327 (511)
T 3usb_A 263 ALVKASVDAIVLDTAH----GHS-Q-------GVIDKVKEVRAKYPSLNIIA-GNVATAEATKALIEAGANVVKVGIG 327 (511)
T ss_dssp HHHHTTCSEEEEECSC----TTS-H-------HHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHhhccceEEecccc----cch-h-------hhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHHHhCCCEEEECCC
Confidence 4557899999997532 110 0 01567778877777888874 7899999999999999999998543
No 255
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.53 E-value=0.043 Score=53.54 Aligned_cols=66 Identities=17% Similarity=0.296 Sum_probs=49.9
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
..|.++|+|.|.|..- .|.+.. -.+.+..+++.+++++|| .|+|-|.+.++.+++.|+|+|-+|-|
T Consensus 287 ~aLv~AGvD~iviD~a----hGhs~~--------v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aGAD~vkVGiG 352 (556)
T 4af0_A 287 KLLAEAGLDVVVLDSS----QGNSVY--------QIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAGADGLRIGMG 352 (556)
T ss_dssp HHHHHTTCCEEEECCS----CCCSHH--------HHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHhcCCcEEEEecc----ccccHH--------HHHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcCCCEEeecCC
Confidence 3456899999999642 232210 156677777778888874 58899999999999999999998866
No 256
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.52 E-value=0.42 Score=43.24 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCC-CCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d-~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
..++.+.+.++.+++.++.|+.|-+-.... ....+++.+ +.+.+.|++.|.+|... | +
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~----~~~~~~g~d~V~~~~g~---------------p--~ 108 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYR----AAIIEAGIRVVETAGND---------------P--G 108 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHH----HHHHHTTCCEEEEEESC---------------C--H
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHH----HHHHhcCCCEEEEcCCC---------------c--H
Confidence 358888899999988777787765543200 012333333 34567999999999631 1 3
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe-cHH
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GRA 144 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI-GRg 144 (282)
+.+..+.+ . ++||+. ++.|.+++..+.+.|+|+|.+ |+.
T Consensus 109 ~~~~~l~~-~-gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~~ 148 (328)
T 2gjl_A 109 EHIAEFRR-H-GVKVIH--KCTAVRHALKAERLGVDAVSIDGFE 148 (328)
T ss_dssp HHHHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSEEEEECTT
T ss_pred HHHHHHHH-c-CCCEEe--eCCCHHHHHHHHHcCCCEEEEECCC
Confidence 44545544 3 788884 589999999888899999998 653
No 257
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.47 E-value=0.42 Score=41.64 Aligned_cols=89 Identities=20% Similarity=0.088 Sum_probs=62.5
Q ss_pred HHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHH
Q 023442 29 GEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL 108 (282)
Q Consensus 29 ~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~ 108 (282)
.++++.+.+. +|..=+|. ++.+...+ +++.+.+.|+..|.|.-|+.. ..+.+++++
T Consensus 25 ~~~~~~l~~~---~vv~Vir~--~~~~~a~~----~a~al~~gGi~~iEvt~~t~~---------------a~e~I~~l~ 80 (232)
T 4e38_A 25 STINNQLKAL---KVIPVIAI--DNAEDIIP----LGKVLAENGLPAAEITFRSDA---------------AVEAIRLLR 80 (232)
T ss_dssp HHHHHHHHHH---CEEEEECC--SSGGGHHH----HHHHHHHTTCCEEEEETTSTT---------------HHHHHHHHH
T ss_pred HHHHHHHHhC---CEEEEEEc--CCHHHHHH----HHHHHHHCCCCEEEEeCCCCC---------------HHHHHHHHH
Confidence 3455565553 34333563 33333333 345667899999999877521 156777787
Q ss_pred hcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 109 RDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 109 ~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+++++ .+++-|-|.+.++++.+++.|||+|+..
T Consensus 81 ~~~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 81 QAQPE-MLIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp HHCTT-CEEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred HhCCC-CEEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 77765 5889999999999999999999999875
No 258
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.31 E-value=0.23 Score=42.05 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=56.5
Q ss_pred HHHHHHhhcCCccEEEEecCCCCCC-----CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 30 EAMSVIAANTNVPVSVKCRIGVDDH-----DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR~G~d~~-----~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.++++++.+++|+...++..+.+. ...++ +. .+.++|++.+++|..... .|.. .-.+.+
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~----i~-~~~~~Gad~v~l~~~~~~----~p~~------~~~~~i 110 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKE----VD-ELIESQCEVIALDATLQQ----RPKE------TLDELV 110 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHH----HH-HHHHHTCSEEEEECSCSC----CSSS------CHHHHH
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHH----HH-HHHhCCCCEEEEeeeccc----Cccc------CHHHHH
Confidence 3456666667889843233222110 12222 21 234789999999974311 0100 013455
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
..+.+.+++++++. ++.|++++.++.+.|+|.|+++
T Consensus 111 ~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 111 SYIRTHAPNVEIMA--DIATVEEAKNAARLGFDYIGTT 146 (223)
T ss_dssp HHHHHHCTTSEEEE--ECSSHHHHHHHHHTTCSEEECT
T ss_pred HHHHHhCCCceEEe--cCCCHHHHHHHHHcCCCEEEeC
Confidence 56655555777765 6789999998878999999875
No 259
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.27 E-value=0.51 Score=43.68 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=35.3
Q ss_pred CccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 98 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
...|+.+.++++. .++||+. +++.|+++++.+.+.|+|+|.++
T Consensus 211 ~~~~~~i~~l~~~-~~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 211 SLSWKDVAWLQTI-TSLPILV-KGVITAEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp TCCHHHHHHHHHH-CCSCEEE-ECCCSHHHHHHHHHTTCSEEEEC
T ss_pred cchHHHHHHHHHH-hCCCEEE-EecCCHHHHHHHHHcCCCEEEEC
Confidence 3457778788776 4899985 67799999999999999999984
No 260
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.25 E-value=0.068 Score=49.41 Aligned_cols=59 Identities=20% Similarity=0.315 Sum_probs=44.8
Q ss_pred CCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 71 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 71 ~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
.|++.+.+|... |. + +.-|+.+.++++..+++||+. |+|.|+++++.+.+.|+|+|.++
T Consensus 131 ~g~~~i~i~~~~----g~-~-------~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 131 PQVKYICLDVAN----GY-S-------EHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TTCCEEEEECSC----TT-B-------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEecC----CC-c-------HHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 389999998631 21 1 112677878877666899874 77899999999999999999886
No 261
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.18 E-value=0.63 Score=42.70 Aligned_cols=87 Identities=17% Similarity=0.222 Sum_probs=52.1
Q ss_pred HHHHHHHH--HhCCCCEEEEec-CCc-ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEE-EccCCCCHHHHHHHHH--
Q 023442 61 CDFIYKVS--SLSPTRHFIIHS-RKA-LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LNGGINTVDEVNAALR-- 133 (282)
Q Consensus 61 ~~~v~~~l--e~~Gv~~i~VH~-Rt~-~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi-~nGdI~s~eda~~~l~-- 133 (282)
+...++.+ .+.|+|.+-+-- .+. ...|.+..+.-+...-..+.+.++... ..+|+| .+||+ +.++..+.++
T Consensus 190 V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a-~~~P~v~lsgG~-~~~~fl~~v~~A 267 (332)
T 3iv3_A 190 VNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAS-TDLPYIYLSAGV-SAELFQETLVFA 267 (332)
T ss_dssp HHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHT-CSSCEEEECTTC-CHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhc-CCCCEEEECCCC-CHHHHHHHHHHH
Confidence 44456777 567999998862 221 112321110000000012346666553 589965 79998 6777777774
Q ss_pred --cCC--CEEEecHHhhhCC
Q 023442 134 --KGA--HHVMVGRAAYQNP 149 (282)
Q Consensus 134 --~g~--DgVmIGRgal~nP 149 (282)
.|+ .||.+||....+.
T Consensus 268 ~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 268 HKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHTCCCCEEEECHHHHTTH
T ss_pred HHcCCCcceEEeeHHHHHhh
Confidence 699 9999999987774
No 262
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=94.13 E-value=0.13 Score=47.94 Aligned_cols=95 Identities=6% Similarity=-0.129 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+++...++++++++++ ++++.+...-+|+. ++..++ ++.+++.|+++|. +.. + -++
T Consensus 183 ~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~----~~ai~~-~~~l~~~~i~~iE--------~P~--------~-~d~ 240 (392)
T 3p3b_A 183 GTKRDIAIVRGISEVAGPAGKIMIDANNAYNL----NLTKEV-LAALSDVNLYWLE--------EAF--------H-EDE 240 (392)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEECTTCCCH----HHHHHH-HHHTTTSCEEEEE--------CSS--------S-CCH
T ss_pred cHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HHHHHH-HHHHHhcCCCEEe--------cCC--------c-ccH
Confidence 5677788999999876 57888877666743 344443 4567788877653 111 1 126
Q ss_pred HHHHHHHhcC----CCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 102 EYYYALLRDF----PDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~~----~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+...++.+.. .++||++.+ +.++++++++++ ..||.|.+
T Consensus 241 ~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 241 ALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEe
Confidence 6666666541 579999999 999999999999 56898765
No 263
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.03 E-value=0.67 Score=40.09 Aligned_cols=101 Identities=16% Similarity=0.092 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhcCCccEEEEecCCCCCC-CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHH
Q 023442 27 FVGEAMSVIAANTNVPVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 105 (282)
Q Consensus 27 ~~~eiv~~v~~~~~ipvsvKiR~G~d~~-~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~ 105 (282)
++..+++.+...-++-||| +.--+++ ...+.+. .+++.++++|+..|.+.+ .+.+.
T Consensus 6 ~~~~~~~~~~~~~~livsc--q~~~~~pl~~~~~~~-~~A~a~~~~Ga~~i~~~~--------------------~~~i~ 62 (232)
T 3igs_A 6 LLEQLDKNIAASGGLIVSC--QPVPGSPLDKPEIVA-AMALAAEQAGAVAVRIEG--------------------IDNLR 62 (232)
T ss_dssp HHHHHHHHHHHHCCEEEEC--CCCTTCTTCSHHHHH-HHHHHHHHTTCSEEEEES--------------------HHHHH
T ss_pred HHHHHHHHhhhcCCEEEEE--eCCCCCCCCCcchHH-HHHHHHHHCCCeEEEECC--------------------HHHHH
Confidence 4556666663322455555 4322222 2233444 357788999999988721 45566
Q ss_pred HHHhcCCCceEEE-c----cC--C---CCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 106 ALLRDFPDLTFTL-N----GG--I---NTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 106 ~l~~~~~~ipVi~-n----Gd--I---~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
++++ .+++||++ + || + .+.+++.++++.|+|.|.++-++..+|..
T Consensus 63 ~ir~-~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~ 117 (232)
T 3igs_A 63 MTRS-LVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVA 117 (232)
T ss_dssp HHHT-TCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSC
T ss_pred HHHH-hcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHH
Confidence 6655 46899986 2 33 3 36778998888999999999888788964
No 264
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=94.02 E-value=0.36 Score=44.95 Aligned_cols=47 Identities=19% Similarity=0.097 Sum_probs=37.4
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhh
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQ 147 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~ 147 (282)
+++...++.+. .++||.+...+.|.+|+.++++ ..+|.|++--+-.+
T Consensus 231 ~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~G 278 (386)
T 3fv9_G 231 SWAETKSLRAR-CALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQG 278 (386)
T ss_dssp SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHT
T ss_pred CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccC
Confidence 47777677664 5899999999999999999998 67999887544433
No 265
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.00 E-value=0.74 Score=41.78 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
.+++.+.+.++.+++.++.|+.|.+=. ++. ...+.+ +.+.+.|++.|.+|+.. | .+
T Consensus 60 ~~~~~l~~~i~~i~~~~~~p~gVnl~~-~~~--~~~~~~----~~~~~~g~d~V~l~~g~-------p----------~~ 115 (326)
T 3bo9_A 60 MKPDDLRKAISELRQKTDKPFGVNIIL-VSP--WADDLV----KVCIEEKVPVVTFGAGN-------P----------TK 115 (326)
T ss_dssp CCHHHHHHHHHHHHTTCSSCEEEEEET-TST--THHHHH----HHHHHTTCSEEEEESSC-------C----------HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEEec-cCC--CHHHHH----HHHHHCCCCEEEECCCC-------c----------HH
Confidence 378889999999998878898887643 222 233333 34567999999998742 1 23
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe-cH
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 143 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI-GR 143 (282)
.+..+.+ .+++|+. .|.+.+++..+.+.|+|+|.+ |+
T Consensus 116 ~~~~l~~--~g~~v~~--~v~s~~~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 116 YIRELKE--NGTKVIP--VVASDSLARMVERAGADAVIAEGM 153 (326)
T ss_dssp HHHHHHH--TTCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHH--cCCcEEE--EcCCHHHHHHHHHcCCCEEEEECC
Confidence 3444433 3678875 689999999988899999998 53
No 266
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=93.99 E-value=0.13 Score=44.78 Aligned_cols=46 Identities=30% Similarity=0.455 Sum_probs=38.9
Q ss_pred HHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 105 YALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 105 ~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.++++.. .+++|++-|+|.+.+|+..+.+.|+||+.||.++|.-+.
T Consensus 164 ~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~ 210 (226)
T 1w0m_A 164 VGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKD 210 (226)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSS
T ss_pred HHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcC
Confidence 3444443 368999999999999999998899999999999998777
No 267
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=93.95 E-value=0.14 Score=46.15 Aligned_cols=106 Identities=7% Similarity=0.029 Sum_probs=63.2
Q ss_pred cccccc---CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCc
Q 023442 17 FGVSLM---LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAEN 93 (282)
Q Consensus 17 yGs~Ll---~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~ 93 (282)
+|..+. .+.+.+.+-|++|+++++ +..+|+=+--..-.+ ++....+.+++.++|+|+|--+.... ..|.+..
T Consensus 123 ig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~-~e~i~~A~~ia~~AGADFVKTSTGf~-~~gAT~e-- 197 (297)
T 4eiv_A 123 WRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQG-GDIISRAAVAALEGGADFLQTSSGLG-ATHATMF-- 197 (297)
T ss_dssp THHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCC-HHHHHHHHHHHHHHTCSEEECCCSSS-SCCCCHH--
T ss_pred HHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCc-HHHHHHHHHHHHHhCCCEEEcCCCCC-CCCCCHH--
Confidence 465555 578889999999998884 556776432111112 23222345677789999997654321 0121111
Q ss_pred CCCCCccHHHHHHHHhc--------------------CCCceEEEc-cCCCCHHHHHHHHH
Q 023442 94 RTIPPLKYEYYYALLRD--------------------FPDLTFTLN-GGINTVDEVNAALR 133 (282)
Q Consensus 94 ~~i~~~~~~~i~~l~~~--------------------~~~ipVi~n-GdI~s~eda~~~l~ 133 (282)
....+.+.+++ ...+.|=++ |||+|.+|+.++++
T Consensus 198 ------dV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 198 ------TVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp ------HHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHH
Confidence 12233343321 146788888 99999999999998
No 268
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=93.94 E-value=0.081 Score=47.60 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=65.8
Q ss_pred ccccCCHHHH-----HHHHHHHhhcCC-ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCC
Q 023442 19 VSLMLDPKFV-----GEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 92 (282)
Q Consensus 19 s~Ll~~p~~~-----~eiv~~v~~~~~-ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad 92 (282)
+.|+++.... .+.++++++... .++.|-+. +.++.. .+.++|+|.|-+|.-+. .+
T Consensus 167 ~vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~-------t~eea~-----eal~aGaD~I~LDn~~~-------~~ 227 (284)
T 1qpo_A 167 AALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVD-------SLEQLD-----AVLPEKPELILLDNFAV-------WQ 227 (284)
T ss_dssp SEEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEES-------SHHHHH-----HHGGGCCSEEEEETCCH-------HH
T ss_pred hhcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeC-------CHHHHH-----HHHHcCCCEEEECCCCH-------HH
Confidence 4566654432 345555555431 25555443 234432 23468999999997431 10
Q ss_pred cCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 93 NRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
--+.+..+....+++++.++||| |++.+.++.++|+|++.+|.....-|++
T Consensus 228 -------~~~~v~~l~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~~~ 278 (284)
T 1qpo_A 228 -------TQTAVQRRDSRAPTVMLESSGGL-SLQTAATYAETGVDYLAVGALTHSVRVL 278 (284)
T ss_dssp -------HHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTSSBCCC
T ss_pred -------HHHHHHHhhccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHcCCCCc
Confidence 01223333333457899999999 8999999999999999999866666654
No 269
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.90 E-value=0.095 Score=49.11 Aligned_cols=63 Identities=21% Similarity=0.265 Sum_probs=46.5
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
.+.++|++.|.+|.-. |. +...|+.+..+.+..+++||+. |++.++++++.+.+.|+|+|.+|
T Consensus 160 ~~~~~G~d~i~i~~~~----g~--------~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 160 ELVKAHVDILVIDSAH----GH--------STRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHCCCCEEEEeCCC----CC--------hHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 3457999999986421 21 1123666777766655899987 77899999999988999999994
No 270
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=93.88 E-value=0.45 Score=44.54 Aligned_cols=99 Identities=7% Similarity=-0.065 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 24 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
+++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.|+.+|. + .++ +++
T Consensus 195 ~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~----~~A~~-~~~~l~~~~i~~iE--------q--------P~~--d~~ 251 (398)
T 4dye_A 195 DCAGDVAILRAVREALPGVNLRVDPNAAWSV----PDSVR-AGIALEELDLEYLE--------D--------PCV--GIE 251 (398)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE--------C--------CSS--HHH
T ss_pred CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----HHHHH-HHHHHhhcCCCEEc--------C--------CCC--CHH
Confidence 3444455555665554 45556655555542 12222 33445566666552 0 111 466
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
...++.+. .++||.+...+.+.+++.++++ ..+|.|++--+-.
T Consensus 252 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 295 (398)
T 4dye_A 252 GMAQVKAK-VRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKW 295 (398)
T ss_dssp HHHHHHHH-CCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHhh-CCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCcccc
Confidence 66777665 5899999999999999999998 6799988754433
No 271
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=93.85 E-value=0.46 Score=42.78 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=63.1
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||..+++.+++.++ . .+++||.+|.-... . .+++... +..+...|...+++.-|...+ +...
T Consensus 114 IgA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~-t---~~ei~~A-v~~i~~~Gn~~i~L~~rg~~~-~y~~------ 176 (292)
T 1o60_A 114 LPAFLARQTDLVEAM----A-KTGAVINVKKPQFL-S---PSQMGNI-VEKIEECGNDKIILCDRGTNF-GYDN------ 176 (292)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTCEEEEECCTTS-C---GGGHHHH-HHHHHHTTCCCEEEEECCEEC-STTC------
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEeCCCCC-C---HHHHHHH-HHHHHHcCCCeEEEEECCCCC-CCCc------
Confidence 588899999965554 3 35899999964321 2 2233332 335567898666665554333 2110
Q ss_pred CCccHHHHHHHHhcCCCceEEEc---------------cCCCC--HHHHHHHHHcCCCEEEecHHh
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~n---------------GdI~s--~eda~~~l~~g~DgVmIGRga 145 (282)
.-+++..+..+++.++++||+.. +|... ..-+......|+||+||=+-.
T Consensus 177 ~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 177 LIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp EECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred cccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 01234555566665557899882 22111 122333445899999997653
No 272
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.49 E-value=0.086 Score=47.33 Aligned_cols=80 Identities=13% Similarity=0.120 Sum_probs=47.6
Q ss_pred HHhCCCCEEEEecC-Cc-ccCCCCcCCcCCCC--CccHHHHHHHHhc-CCCceEEEc-cCCCCHHHHHHHHH--cCCCEE
Q 023442 68 SSLSPTRHFIIHSR-KA-LLNGISPAENRTIP--PLKYEYYYALLRD-FPDLTFTLN-GGINTVDEVNAALR--KGAHHV 139 (282)
Q Consensus 68 le~~Gv~~i~VH~R-t~-~~~G~~~ad~~~i~--~~~~~~i~~l~~~-~~~ipVi~n-GdI~s~eda~~~l~--~g~DgV 139 (282)
+.++|+|.|.+|.. |. ..-|...+- ... +-..+.+.+.+++ .+++.|+.- |+|.+++|++.+++ .|+||+
T Consensus 179 mA~agpDiI~~h~glT~gglIG~~~av--s~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 179 MAKAGADILVCHMGLTTGGAIGARSGK--SMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHHTCSEEEEECSCC---------CC--CHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEE
T ss_pred HHHcCCCEEEECCCCCCCCcccCCCcc--cHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEE
Confidence 45789999999964 32 112221000 000 0001112222232 467776654 49999999999999 379999
Q ss_pred EecHHhhhCC
Q 023442 140 MVGRAAYQNP 149 (282)
Q Consensus 140 mIGRgal~nP 149 (282)
..|.++..=|
T Consensus 257 ~gASsier~p 266 (286)
T 2p10_A 257 YGASSMERLP 266 (286)
T ss_dssp EESHHHHHHH
T ss_pred EeehhhhcCC
Confidence 9999987777
No 273
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.41 E-value=0.53 Score=40.17 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=57.4
Q ss_pred HHHHHHhhcCCccEEEEecCCCCCC-----CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 30 EAMSVIAANTNVPVSVKCRIGVDDH-----DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 30 eiv~~v~~~~~ipvsvKiR~G~d~~-----~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.++.+++.+++|+..-+|.++++. ...+. + +.+.++|++.|.+|...... +.+ . .-.+.+
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~-i----~~~~~~Gad~V~l~~~~~~~----~~~-~----~~~~~i 124 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTE-V----DQLAALNIAVIAMDCTKRDR----HDG-L----DIASFI 124 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHH-H----HHHHTTTCSEEEEECCSSCC----TTC-C----CHHHHH
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHH-H----HHHHHcCCCEEEEcccccCC----CCC-c----cHHHHH
Confidence 3477778878899832234333221 12222 2 23468999999999753210 000 0 013556
Q ss_pred HHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEE
Q 023442 105 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 139 (282)
Q Consensus 105 ~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgV 139 (282)
..+.+.+++++|+. ++.|++++..+.+.|+|.|
T Consensus 125 ~~i~~~~~~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 125 RQVKEKYPNQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp HHHHHHCTTCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred HHHHHhCCCCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 66665555777665 6889999999888999998
No 274
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=93.41 E-value=0.87 Score=41.52 Aligned_cols=102 Identities=15% Similarity=0.199 Sum_probs=63.4
Q ss_pred ccccCCHHH-----HHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCC
Q 023442 19 VSLMLDPKF-----VGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 92 (282)
Q Consensus 19 s~Ll~~p~~-----~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad 92 (282)
+.|+++... +.+.++++++.. ..++.|=+ ++++++.+ . .++|+|.|-++.-+
T Consensus 204 ~vlikdnHi~~~G~i~~Av~~ar~~~p~~kIeVEV-------dtldea~e----A-l~aGaD~I~LDn~~---------- 261 (320)
T 3paj_A 204 AYLIKENHIIACGGIRQAISTAKQLNPGKPVEVET-------ETLAELEE----A-ISAGADIIMLDNFS---------- 261 (320)
T ss_dssp CEEECHHHHHHHTSHHHHHHHHHHHSTTSCEEEEE-------SSHHHHHH----H-HHTTCSEEEEESCC----------
T ss_pred hhccHHHHHHHhCCHHHHHHHHHHhCCCCeEEEEE-------CCHHHHHH----H-HHcCCCEEEECCCC----------
Confidence 556776653 234455555543 34554433 23444322 2 35899999887521
Q ss_pred cCCCCCccHHHHHHHHhcC-CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 93 NRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~~-~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+.+++.++.. .++++.++||| |.+.+.++.++|+|++.+|.--..-|++
T Consensus 262 --------~~~l~~av~~l~~~v~ieaSGGI-t~~~I~~~a~tGVD~isvGalt~sa~~l 312 (320)
T 3paj_A 262 --------LEMMREAVKINAGRAALENSGNI-TLDNLKECAETGVDYISVGALTKHLKAL 312 (320)
T ss_dssp --------HHHHHHHHHHHTTSSEEEEESSC-CHHHHHHHHTTTCSEEECTHHHHSBCCC
T ss_pred --------HHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEECceecCCCcc
Confidence 23344443321 47899999999 7999999999999999999754444543
No 275
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.04 E-value=0.31 Score=44.18 Aligned_cols=105 Identities=7% Similarity=0.034 Sum_probs=63.1
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
+-..+...+-|++++++ +.++.|--|.--.....+++.++. ++.++++|+|.|.+++.+. .
T Consensus 140 l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~R-a~ay~eAGAD~i~~e~~~~-----------------~ 200 (305)
T 3ih1_A 140 LVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIER-ANAYVKAGADAIFPEALQS-----------------E 200 (305)
T ss_dssp BCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHH-HHHHHHHTCSEEEETTCCS-----------------H
T ss_pred ccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHH-HHHHHHcCCCEEEEcCCCC-----------------H
Confidence 44555555666777666 666666556411000124555554 4567899999999998421 3
Q ss_pred HHHHHHHhcCCCceEEEc---cCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 102 EYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~n---GdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
+.+.++.+.. ++|+++| |+-...-...++-+.|+..|..|-.++
T Consensus 201 ~~~~~i~~~~-~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 201 EEFRLFNSKV-NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSL 247 (305)
T ss_dssp HHHHHHHHHS-CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHH
T ss_pred HHHHHHHHHc-CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHH
Confidence 5566777764 7899876 332111124445557999999985553
No 276
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.02 E-value=0.33 Score=42.63 Aligned_cols=49 Identities=14% Similarity=0.273 Sum_probs=38.2
Q ss_pred HHHHHHHHh---c-CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 101 YEYYYALLR---D-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 101 ~~~i~~l~~---~-~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
++-++++++ + ..+++|..-|||+ ++.+.++.+.|||.+.+|+++.+.+.
T Consensus 179 l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~d 231 (246)
T 3inp_A 179 LDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDS 231 (246)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSC
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCC
Confidence 555554433 1 3468999999996 78999999999999999999876665
No 277
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.96 E-value=0.31 Score=42.31 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=60.7
Q ss_pred HHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHH
Q 023442 28 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 107 (282)
Q Consensus 28 ~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l 107 (282)
+.++++.+++. ++.+.+=+..+... +.+ ..++ .++|.+.+.+......|. ...+..++-++++
T Consensus 95 ~~~~i~~i~~~-G~k~gv~lnp~tp~-~~~-------~~~l--~~~D~VlvmsV~pGfggQ------~f~~~~l~kI~~l 157 (231)
T 3ctl_A 95 AFRLIDEIRRH-DMKVGLILNPETPV-EAM-------KYYI--HKADKITVMTVDPGFAGQ------PFIPEMLDKLAEL 157 (231)
T ss_dssp HHHHHHHHHHT-TCEEEEEECTTCCG-GGG-------TTTG--GGCSEEEEESSCTTCSSC------CCCTTHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeEEEEEECCCcH-HHH-------HHHH--hcCCEEEEeeeccCcCCc------cccHHHHHHHHHH
Confidence 45667777654 55555544433211 111 1122 268888754433222221 1112234444444
Q ss_pred Hhc----CCCceEEEccCCCCHHHHHHHHHcCCCEEEec-HHhhhCCc
Q 023442 108 LRD----FPDLTFTLNGGINTVDEVNAALRKGAHHVMVG-RAAYQNPW 150 (282)
Q Consensus 108 ~~~----~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG-Rgal~nP~ 150 (282)
.+. ..+++|..-||| +.+.+.++.+.|+|.+.+| +++...+.
T Consensus 158 r~~~~~~~~~~~I~VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 158 KAWREREGLEYEIEVDGSC-NQATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp HHHHHHHTCCCEEEEESCC-STTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred HHHHhccCCCceEEEECCc-CHHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 321 236899999999 4788999999999999999 98876544
No 278
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.95 E-value=0.74 Score=41.38 Aligned_cols=102 Identities=13% Similarity=0.131 Sum_probs=63.2
Q ss_pred ccccCCHH--H---HHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCC
Q 023442 19 VSLMLDPK--F---VGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 92 (282)
Q Consensus 19 s~Ll~~p~--~---~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad 92 (282)
+.|+++.. . +.+.++++++.. ..|+.|=+ +++++..+ +.++|+|.|-++.-+
T Consensus 171 ~vlikdNHi~~~G~i~~Av~~ar~~~~~~~IeVEv-------~tl~ea~e-----Al~aGaD~I~LDn~~---------- 228 (287)
T 3tqv_A 171 AYLIKENHIRSAGGIAKAVTKAKKLDSNKVVEVEV-------TNLDELNQ-----AIAAKADIVMLDNFS---------- 228 (287)
T ss_dssp SEEECTTTC----CHHHHHHHHHHHCTTSCEEEEE-------SSHHHHHH-----HHHTTCSEEEEESCC----------
T ss_pred EEEEeHHHHHHhCCHHHHHHHHHhhCCCCcEEEEe-------CCHHHHHH-----HHHcCCCEEEEcCCC----------
Confidence 55666543 2 334455555432 35555533 23444322 236899999887622
Q ss_pred cCCCCCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 93 NRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+.+++.++. ..++++.++||| |++.+.++.++|+|.+.+|.-...-|++
T Consensus 229 --------~~~l~~av~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt~sa~~l 279 (287)
T 3tqv_A 229 --------GEDIDIAVSIARGKVALEVSGNI-DRNSIVAIAKTGVDFISVGAITKHIKAI 279 (287)
T ss_dssp --------HHHHHHHHHHHTTTCEEEEESSC-CTTTHHHHHTTTCSEEECSHHHHSBCCC
T ss_pred --------HHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHcCCCEEEEChhhcCCccc
Confidence 1333333332 147899999999 8999999999999999999655555554
No 279
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=92.95 E-value=0.65 Score=41.95 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=46.5
Q ss_pred hCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 70 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 70 ~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
++|+|.|-++.-+ .+.+++.++. ..++++.++||| |.+.+.++.++|+|++.+|.....-
T Consensus 227 ~aGaD~I~LDn~~------------------~~~l~~av~~i~~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 227 AHGARSVLLDNFT------------------LDMMRDAVRVTEGRAVLEVSGGV-NFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp HTTCEEEEEESCC------------------HHHHHHHHHHHTTSEEEEEESSC-STTTHHHHHHTTCSEEECGGGGTSC
T ss_pred HcCCCEEEECCCC------------------HHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCeecCC
Confidence 5899999887622 2333333332 357899999999 8899999999999999999765555
Q ss_pred Ccc
Q 023442 149 PWY 151 (282)
Q Consensus 149 P~i 151 (282)
|++
T Consensus 288 ~~l 290 (298)
T 3gnn_A 288 RAT 290 (298)
T ss_dssp CCC
T ss_pred Ccc
Confidence 654
No 280
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=92.90 E-value=0.068 Score=59.73 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHH-----------HcCCCEEEecHHhhhCCcc
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAAL-----------RKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l-----------~~g~DgVmIGRgal~nP~i 151 (282)
+.++++ .++||||+.|||-+.+++..++ ..|+|||.+|.-++.-..-
T Consensus 754 ~~~v~~-~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 754 YSKIRR-HPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEV 811 (2051)
T ss_dssp HHHHTT-CTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTS
T ss_pred HHHHHh-cCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCccc
Confidence 444444 5699999999999999999999 5799999999998876543
No 281
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=92.88 E-value=0.15 Score=44.00 Aligned_cols=67 Identities=19% Similarity=0.186 Sum_probs=50.1
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhC
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~n 148 (282)
.++|+|.|-+++-.. .| ..++++.+..-++++|++..|||+ ++.+.+.++.|+..+..| +.+..
T Consensus 129 ~~~Gad~vK~FPa~~--~g------------G~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgG-s~l~~ 192 (217)
T 3lab_A 129 AQAGITQLKCFPASA--IG------------GAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGG-SWLTE 192 (217)
T ss_dssp HHTTCCEEEETTTTT--TT------------HHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEE-SGGGC
T ss_pred HHcCCCEEEECcccc--cc------------CHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEC-hhhcC
Confidence 579999998875321 11 146777777767889999999996 899999999998877665 55666
Q ss_pred Ccc
Q 023442 149 PWY 151 (282)
Q Consensus 149 P~i 151 (282)
|.+
T Consensus 193 ~~~ 195 (217)
T 3lab_A 193 SKL 195 (217)
T ss_dssp HHH
T ss_pred hhH
Confidence 554
No 282
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.84 E-value=0.15 Score=48.06 Aligned_cols=63 Identities=16% Similarity=0.238 Sum_probs=44.8
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+.+.++|++.|.+..- .|.+ .--.+.+.++++.+ ++||++ |++.|+++++.+.+.|+|+|.+|
T Consensus 150 ~~lveaGvdvIvldta----~G~~--------~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 150 KLLVEAGVDVIVLDSA----HGHS--------LNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHHHTCSEEEECCS----CCSB--------HHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEeCC----CCCc--------ccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 3456789999987421 1210 00145566666654 789886 78999999999999999999996
No 283
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.59 E-value=1.5 Score=37.75 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=64.7
Q ss_pred HHHHHHHHHHhhcCCccEEEEecCCCCCC-CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 26 KFVGEAMSVIAANTNVPVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 26 ~~~~eiv~~v~~~~~ipvsvKiR~G~d~~-~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
..+.++++.+...-++-||| +.--+++ .+.+.+. .+++.++++|+.+|.+-+ .+.+
T Consensus 5 ~~~~~~~~~~~~~~~livsc--q~~~~~pl~~~~~~~-~~A~a~~~~Ga~~i~~~~--------------------~~~i 61 (229)
T 3q58_A 5 SLLARLEQSVHENGGLIVSC--QPVPGSPMDKPEIVA-AMAQAAASAGAVAVRIEG--------------------IENL 61 (229)
T ss_dssp HHHHHHHHHHHHHCCEEEEC--CCCTTSTTCSHHHHH-HHHHHHHHTTCSEEEEES--------------------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEE--eCCCCCCCCCcchHH-HHHHHHHHCCCcEEEECC--------------------HHHH
Confidence 34566666663322455555 4322222 2233444 357788999999998721 4556
Q ss_pred HHHHhcCCCceEEE-c----cC--C---CCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 105 YALLRDFPDLTFTL-N----GG--I---NTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 105 ~~l~~~~~~ipVi~-n----Gd--I---~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.++++ .+++||++ + || + .+.+++.++++.|+|.|.++-++..+|..
T Consensus 62 ~~ir~-~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~ 117 (229)
T 3q58_A 62 RTVRP-HLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVD 117 (229)
T ss_dssp HHHGG-GCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSC
T ss_pred HHHHH-hcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHH
Confidence 66655 46899984 1 22 2 25678988888999999998777778864
No 284
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.57 E-value=0.65 Score=43.13 Aligned_cols=108 Identities=6% Similarity=0.116 Sum_probs=62.3
Q ss_pred ccCCHHHHHHHHHHHhh-cCCccEEEEecC----C-CCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc--ccCCCCcCC
Q 023442 21 LMLDPKFVGEAMSVIAA-NTNVPVSVKCRI----G-VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA--LLNGISPAE 92 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~-~~~ipvsvKiR~----G-~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~--~~~G~~~ad 92 (282)
.+++|+..... +.+++ +-+.|+..-+.. + |+ .+. +.+.++..+++++.+|--.. ..+.....+
T Consensus 100 ~l~~~~~~~s~-~~vr~~ap~~~~~anlg~~ql~~~~~----~~~----~~~av~~~~a~al~Ihln~~~~~~~p~g~~~ 170 (368)
T 3vkj_A 100 AIEKAEARESF-AIVRKVAPTIPIIANLGMPQLVKGYG----LKE----FQDAIQMIEADAIAVHLNPAQEVFQPEGEPE 170 (368)
T ss_dssp HHHCGGGSHHH-HHHHHHCSSSCEEEEEEGGGGGTTCC----HHH----HHHHHHHTTCSEEEEECCHHHHHHSSSCCCB
T ss_pred ccCCHHHHhhH-HHHHHhCcCcceecCcCeeecCCCCC----HHH----HHHHHHHhcCCCeEEEecchhhhhCCCCCch
Confidence 45567653332 33332 346788766554 3 43 222 22334556788888984321 111111111
Q ss_pred cCCCCCccHHHHHHHHhcCCCceEEEc--cCCCCHHHHHHHHHcCCCEEEe
Q 023442 93 NRTIPPLKYEYYYALLRDFPDLTFTLN--GGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~~~~ipVi~n--GdI~s~eda~~~l~~g~DgVmI 141 (282)
.. ...++.+..+++. .++||+.= |.-.|+++++.+.+.|+|+|.+
T Consensus 171 ~~---~~~~~~i~~i~~~-~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 171 YQ---IYALEKLRDISKE-LSVPIIVKESGNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp CB---THHHHHHHHHHTT-CSSCEEEECSSSCCCHHHHHHHHHTTCCEEEC
T ss_pred hh---HHHHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEE
Confidence 11 0125667777664 58999884 5556999999999999999988
No 285
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=92.30 E-value=1.5 Score=40.38 Aligned_cols=45 Identities=9% Similarity=0.111 Sum_probs=36.2
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
++-+++...++.+. .++||.+.-.+.|.+|+.++++ ..+|.|.+=
T Consensus 225 ~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik 270 (365)
T 3ik4_A 225 PREDWAGMAQVTAQ-SGFAVAADESARSAHDVLRIAREGTASVINIK 270 (365)
T ss_dssp CTTCHHHHHHHHHH-SSSCEEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred CcccHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHhCCCCEEEEc
Confidence 33357777777765 5799999999999999999998 678988764
No 286
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=92.24 E-value=0.41 Score=44.96 Aligned_cols=95 Identities=9% Similarity=0.041 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++...+.++++++++ ++.+.+...-+|+. .+..+ +++.+++.++.+|. +. +++-+++
T Consensus 204 ~~~d~~~v~avR~a~G~~~~l~vDan~~~~~----~~A~~-~~~~l~~~~i~~iE--------eP--------~~~~d~~ 262 (421)
T 4hnl_A 204 METTLKMFAAIKEKYGNQFQMLHDVHERLHP----NQAIQ-FAKAAEPYQLFFLE--------DI--------LPPDQSH 262 (421)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE--------CC--------SCGGGGG
T ss_pred HHHHHHHHHHHHHHhCCCceEeccccccCCH----HHHHH-HHHHhhhhhhcccc--------cC--------CcccchH
Confidence 566677888888887 57788887777754 33333 45678888888773 11 1222355
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
..+++.+. .++||.+.-.+.|..|+.++++ ..||.|++
T Consensus 263 ~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 263 WLTQLRSQ-SATPIATGELFNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp GHHHHHTT-CCCCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHHHhc-CCCCeecCcceehhHHHHHHHhcCCceEEEe
Confidence 56666654 6899999999999999999999 56887754
No 287
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.18 E-value=3.7 Score=36.48 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=65.7
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCC-CEEEEecCCcccCCCCcCCcCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv-~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
.||..+.+.+++.++-+ +++||.+|.-. .. +..|+...+ ..+...|. +.+.+|-.+..|.+. .
T Consensus 127 Igs~~~~n~~ll~~~a~-----~~kPV~lk~G~--~~--t~~ei~~Av-e~i~~~Gn~~i~L~~Rg~~~yp~y---~--- 190 (276)
T 1vs1_A 127 IGARNMQNFPLLREVGR-----SGKPVLLKRGF--GN--TVEELLAAA-EYILLEGNWQVVLVERGIRTFEPS---T--- 190 (276)
T ss_dssp ECGGGTTCHHHHHHHHH-----HTCCEEEECCT--TC--CHHHHHHHH-HHHHHTTCCCEEEEECCBCCSCCS---S---
T ss_pred ECcccccCHHHHHHHHc-----cCCeEEEcCCC--CC--CHHHHHHHH-HHHHHcCCCeEEEEeCCcCCCCCc---C---
Confidence 58899999999777653 38999999643 21 344544433 34567887 555567223222211 1
Q ss_pred CCCccHHHHHHHHhcCCCceEEE-----ccCCCC--HHHHHHHHHcCCCEEEecHHh
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTL-----NGGINT--VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~-----nGdI~s--~eda~~~l~~g~DgVmIGRga 145 (282)
...+++..+..+++.+ ++||++ +|+ .. .+-+......|+||+||=+-.
T Consensus 191 ~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~-~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 191 RFTLDVAAVAVLKEAT-HLPVIVDPSHPAGR-RSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp SSBCBHHHHHHHHHHB-SSCEEECCHHHHCS-GGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred cchhCHHHHHHHHHHh-CCCEEEeCCCCCCc-cchHHHHHHHHHHcCCCEEEEEecC
Confidence 1234577676666543 789875 232 22 333444455899999997653
No 288
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=92.18 E-value=0.95 Score=42.16 Aligned_cols=46 Identities=11% Similarity=-0.086 Sum_probs=37.2
Q ss_pred cHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 100 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
+++...++.+. .++||.+...+.|.+|+.++++ ..+|.|++--+-.
T Consensus 246 ~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~ 292 (391)
T 4e8g_A 246 TLEEIAAIRGR-VQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRI 292 (391)
T ss_dssp SHHHHHHHGGG-CCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred cHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 47777777664 5899999999999999999998 6799988764443
No 289
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.07 E-value=1.4 Score=39.70 Aligned_cols=56 Identities=14% Similarity=0.040 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
-..+.+...++.|...+++||.+.+-.|+.+ .+.+.+.+ +.++++|+.++.+-+..
T Consensus 66 vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~---~~~v~~~v-~~l~~aGaagv~iEDq~ 121 (298)
T 3eoo_A 66 STMDDVLVDANRITNATNLPLLVDIDTGWGG---AFNIARTI-RSFIKAGVGAVHLEDQV 121 (298)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEECTTCSSS---HHHHHHHH-HHHHHTTCSEEEEECBC
T ss_pred CCHHHHHHHHHHHHhhcCCeEEEECCCCCCC---HHHHHHHH-HHHHHhCCeEEEECCCC
Confidence 3456777777888888899999999999743 33444443 55678999999998654
No 290
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=92.00 E-value=1.8 Score=39.18 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=63.6
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCCCcCCcCCCCCcc
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK 100 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-~~~G~~~ad~~~i~~~~ 100 (282)
.-..+.+...++.|...+++||.+.+-.|+.+ .+.+.+. .+.++++|++++.+-+... ...|.. .+..+-|..
T Consensus 71 ~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~---~~~v~~~-v~~l~~aGaagv~iED~~~~krcGh~--~gk~l~~~~ 144 (305)
T 3ih1_A 71 IVTSTEVAERARDLVRATDLPVLVDIDTGFGG---VLNVART-AVEMVEAKVAAVQIEDQQLPKKCGHL--NGKKLVTTE 144 (305)
T ss_dssp CSCHHHHHHHHHHHHHHHCCCEEEECTTCSSS---HHHHHHH-HHHHHHTTCSEEEEECBCSSCCTTCT--TCCCBCCHH
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC---HHHHHHH-HHHHHHhCCcEEEECCCCCCcccCCC--CCCcccCHH
Confidence 33556667777888777899999999998744 2344443 4566789999999986542 111221 111122211
Q ss_pred --HHHHHHHHhcCCCceEEEccCCC-------CHHHHHHHHHcCCCEEEe
Q 023442 101 --YEYYYALLRDFPDLTFTLNGGIN-------TVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 101 --~~~i~~l~~~~~~ipVi~nGdI~-------s~eda~~~l~~g~DgVmI 141 (282)
.+.|+..+...++.-|++=-|-. ..++++.+.+.|||+|++
T Consensus 145 e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 145 ELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 12233333332334444444432 123333333479999998
No 291
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.96 E-value=1.2 Score=40.24 Aligned_cols=93 Identities=13% Similarity=0.159 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 23 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
-+++.+.+.++.+++.++.|+.|-+-. ++. .+.+. ++.+.++|++.|.+|+.. | .+
T Consensus 46 ~~~~~~~~~i~~i~~~~~~p~gvnl~~-~~~--~~~~~----~~~a~~~g~d~V~~~~g~-------p----------~~ 101 (332)
T 2z6i_A 46 APKEVVKANIDKIKSLTDKPFGVNIML-LSP--FVEDI----VDLVIEEGVKVVTTGAGN-------P----------SK 101 (332)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEEECT-TST--THHHH----HHHHHHTTCSEEEECSSC-------G----------GG
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEecC-CCC--CHHHH----HHHHHHCCCCEEEECCCC-------h----------HH
Confidence 378888899999988777898887643 222 23332 334568999999999732 1 12
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe-cH
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 143 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI-GR 143 (282)
.+..+.+ .++||+. .|.+.++++.+.+.|+|+|.+ |+
T Consensus 102 ~i~~l~~--~g~~v~~--~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 102 YMERFHE--AGIIVIP--VVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp THHHHHH--TTCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHH--cCCeEEE--EeCCHHHHHHHHHcCCCEEEEECC
Confidence 2333433 2688874 478999998888899999998 64
No 292
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=91.80 E-value=0.15 Score=44.58 Aligned_cols=35 Identities=11% Similarity=0.282 Sum_probs=32.0
Q ss_pred CceEEEccCCCCHHHHHHHHH--cCCCEEEecHHhhhC
Q 023442 113 DLTFTLNGGINTVDEVNAALR--KGAHHVMVGRAAYQN 148 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~--~g~DgVmIGRgal~n 148 (282)
++||..-||| +.+.+.++.+ .|+|++.+|++++..
T Consensus 187 ~~~I~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 187 EKLINIDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp GCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred CceEEEECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 6899999999 5899999999 999999999998874
No 293
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=91.77 E-value=0.43 Score=39.83 Aligned_cols=81 Identities=11% Similarity=-0.027 Sum_probs=52.1
Q ss_pred ccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEc
Q 023442 41 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLN 119 (282)
Q Consensus 41 ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~n 119 (282)
.|+.+=+|. . + .++..+ +++.+.+.|++.|.+|.++.. ..+.+.++.+..+ ++ +++.
T Consensus 10 ~~~i~~~~~-~-~---~~~~~~-~~~~~~~~G~~~iev~~~~~~---------------~~~~i~~ir~~~~~~~-~ig~ 67 (205)
T 1wa3_A 10 HKIVAVLRA-N-S---VEEAKE-KALAVFEGGVHLIEITFTVPD---------------ADTVIKELSFLKEKGA-IIGA 67 (205)
T ss_dssp HCEEEEECC-S-S---HHHHHH-HHHHHHHTTCCEEEEETTSTT---------------HHHHHHHTHHHHHTTC-EEEE
T ss_pred CCEEEEEec-C-C---HHHHHH-HHHHHHHCCCCEEEEeCCChh---------------HHHHHHHHHHHCCCCc-EEEe
Confidence 356555663 2 2 233333 456778899999999987521 0233444444333 33 4567
Q ss_pred cCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 120 GGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 120 GdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
|-+.|++++..+.+.|+|+| ++-+
T Consensus 68 ~~v~~~~~~~~a~~~Gad~i-v~~~ 91 (205)
T 1wa3_A 68 GTVTSVEQCRKAVESGAEFI-VSPH 91 (205)
T ss_dssp ESCCSHHHHHHHHHHTCSEE-ECSS
T ss_pred cccCCHHHHHHHHHcCCCEE-EcCC
Confidence 78899999999999999999 6644
No 294
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=91.64 E-value=0.87 Score=40.66 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=61.9
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||..+++.+++.++ . .++.||.+|.-... . ..++... +..+...|...+++.-|+..| +. +.
T Consensus 111 Iga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~-t---~~e~~~A-~~~i~~~Gn~~i~L~~rg~~~-~~---~~--- 173 (280)
T 2qkf_A 111 LPAFLARQTDLVVAM----A-KTGNVVNIKKPQFL-S---PSQMKNI-VEKFHEAGNGKLILCERGSSF-GY---DN--- 173 (280)
T ss_dssp ECGGGTTBHHHHHHH----H-HTCCEEEEECCTTS-C---GGGHHHH-HHHHHHTTCCCEEEEECCEEC-ST---TC---
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEECCCCC-C---HHHHHHH-HHHHHHcCCCeEEEEECCCCC-CC---Cc---
Confidence 588889999865554 2 45899999964321 2 2233332 335567898666665554333 21 10
Q ss_pred CCccHHHHHHHHhcCCCceEEEc-----------cCCCC------HHHHHHHHHcCCCEEEecHHh
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLN-----------GGINT------VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~n-----------GdI~s------~eda~~~l~~g~DgVmIGRga 145 (282)
..++...+..+++.++++||+.. |+-.. ..-+......|+||+||=+-.
T Consensus 174 ~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 174 LVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHP 239 (280)
T ss_dssp EECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC--
T ss_pred cccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecC
Confidence 01234455566665557899883 11111 122333344899999997654
No 295
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=91.53 E-value=0.25 Score=42.48 Aligned_cols=70 Identities=24% Similarity=0.406 Sum_probs=48.4
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHH--HHHHHHHcCCCEE
Q 023442 62 DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD--EVNAALRKGAHHV 139 (282)
Q Consensus 62 ~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~e--da~~~l~~g~DgV 139 (282)
..++++.+++|++.+.+.+.. .+.+..+.+..++ .++..|||.. + +..++++.|+|.+
T Consensus 118 ~~~a~~a~~~G~~GvV~sat~------------------~~e~~~ir~~~~~-f~~v~pGI~~-~g~~~~~a~~~Gad~i 177 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPATR------------------PSMISRVKGDFPD-KLVISPGVGT-QGAKPGIALCHGADYE 177 (215)
T ss_dssp HHHHHHHHHHCCSEEECCTTS------------------HHHHHHHHHHCTT-SEEEECCTTS-TTCCTTHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCceeeCCCC------------------HHHHHHHHHhCCC-cEEEcCCCCc-CcCCHHHHHHcCCCEE
Confidence 345667788899888775521 2233444444556 5778899863 3 5667777899999
Q ss_pred EecHHhhhCCcc
Q 023442 140 MVGRAAYQNPWY 151 (282)
Q Consensus 140 mIGRgal~nP~i 151 (282)
.+||+++..+..
T Consensus 178 VvGr~I~~a~dp 189 (215)
T 3ve9_A 178 IVGRSVYQSADP 189 (215)
T ss_dssp EECHHHHTSSSH
T ss_pred EeCHHHcCCCCH
Confidence 999999887663
No 296
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.50 E-value=0.67 Score=43.01 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=47.8
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH-HHHHHHHhcCCCceEEEccCC---CCHHHHHHHHHcCCCEEE
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY-EYYYALLRDFPDLTFTLNGGI---NTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~-~~i~~l~~~~~~ipVi~nGdI---~s~eda~~~l~~g~DgVm 140 (282)
.+.++..|+|++.+|-...... ..|....... .| +.+.++++. .++||+.=| | .++++++.+.+.|+|+|.
T Consensus 161 ~~~ve~~~adal~ihln~~qe~-~~p~Gd~~~~--~~~~~I~~l~~~-~~~PVivK~-vg~g~s~e~A~~l~~aGad~I~ 235 (365)
T 3sr7_A 161 LQAVRDLQPLFLQVHINLMQEL-LMPEGEREFR--SWKKHLSDYAKK-LQLPFILKE-VGFGMDVKTIQTAIDLGVKTVD 235 (365)
T ss_dssp HHHHHHHCCSCEEEEECHHHHH-TSSSSCCCCH--HHHHHHHHHHHH-CCSCEEEEE-CSSCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCCEEEEeccccccc-cCCCCCCcHH--HHHHHHHHHHHh-hCCCEEEEE-CCCCCCHHHHHHHHHcCCCEEE
Confidence 4456788999999997542100 0011101000 24 557777665 589998764 6 799999999999999998
Q ss_pred ec
Q 023442 141 VG 142 (282)
Q Consensus 141 IG 142 (282)
++
T Consensus 236 V~ 237 (365)
T 3sr7_A 236 IS 237 (365)
T ss_dssp CC
T ss_pred Ee
Confidence 83
No 297
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=91.48 E-value=1.3 Score=42.02 Aligned_cols=44 Identities=7% Similarity=-0.028 Sum_probs=34.0
Q ss_pred CccHHHHHHHHhc--CCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 98 PLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 98 ~~~~~~i~~l~~~--~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+-+++...++.+. ..++||.+.-.+.|..++.++++ ..+|.|++
T Consensus 282 ~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~ 328 (441)
T 4a35_A 282 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQI 328 (441)
T ss_dssp TTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred cccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEE
Confidence 3346666666553 14799999999999999999998 67888765
No 298
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=91.26 E-value=1.8 Score=38.82 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=63.6
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||..+++.+++.++- .+++||.+|.-...+ .+|+... +..+.+.|.+.|++--|+-.| +. ++
T Consensus 116 IgA~~~~n~~LLr~va-----~~gkPVilK~G~~~t----~~ei~~a-ve~i~~~Gn~~i~L~erg~~y-~~---~~--- 178 (285)
T 3sz8_A 116 VPAFLARQTDLVVAIA-----KAGKPVNVKKPQFMS----PTQLKHV-VSKCGEVGNDRVMLCERGSSF-GY---DN--- 178 (285)
T ss_dssp ECGGGTTCHHHHHHHH-----HTSSCEEEECCTTSC----GGGTHHH-HHHHHHTTCCCEEEEECCEEC-SS---SC---
T ss_pred ECccccCCHHHHHHHH-----ccCCcEEEeCCCCCC----HHHHHHH-HHHHHHcCCCcEEEEeCCCCC-CC---Cc---
Confidence 5888999999655543 358999999654211 1222222 334567888777764444333 21 11
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCC-----------C------HHHHHHHHHcCCCEEEecHH
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGIN-----------T------VDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~-----------s------~eda~~~l~~g~DgVmIGRg 144 (282)
.-+++..+..+++.++++||+...+=. + +.-+..+...||||+||=+-
T Consensus 179 ~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H 243 (285)
T 3sz8_A 179 LVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAH 243 (285)
T ss_dssp EECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEE
T ss_pred CccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEec
Confidence 012355555666655469998843321 1 23344455589999998654
No 299
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=91.18 E-value=1.8 Score=39.02 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=62.2
Q ss_pred ccccCCHHH-----HHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCC
Q 023442 19 VSLMLDPKF-----VGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 92 (282)
Q Consensus 19 s~Ll~~p~~-----~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad 92 (282)
+.|++|... +.+.++.+++.. ..|+.|=+ +++++..+ . .++|+|.|-+..-+
T Consensus 180 ~vLIKdNHi~~~G~i~~Av~~ar~~~p~~kIeVEv-------~tl~e~~e----A-l~aGaDiImLDn~s---------- 237 (300)
T 3l0g_A 180 GVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIEC-------DNISQVEE----S-LSNNVDMILLDNMS---------- 237 (300)
T ss_dssp CEEECHHHHHHHSCHHHHHHHHHHHSSSCCEEEEE-------SSHHHHHH----H-HHTTCSEEEEESCC----------
T ss_pred eEEEcHhHHHHhCCHHHHHHHHHHhCCCCCEEEEE-------CCHHHHHH----H-HHcCCCEEEECCCC----------
Confidence 456666542 234555555543 34555533 23444332 2 36899999776421
Q ss_pred cCCCCCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 93 NRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 93 ~~~i~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.+.+++.++. ..++.+.++||| |++.+.++.++|+|.+.+|.--..-|++
T Consensus 238 --------~~~l~~av~~~~~~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 238 --------ISEIKKAVDIVNGKSVLEVSGCV-NIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp --------HHHHHHHHHHHTTSSEEEEESSC-CTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred --------HHHHHHHHHhhcCceEEEEECCC-CHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 1333333322 136899999999 8999999999999999999444344554
No 300
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=91.14 E-value=0.067 Score=48.33 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=28.2
Q ss_pred CCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCcc
Q 023442 112 PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 112 ~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~i 151 (282)
+++||.++||| |.+.+.++.++|+|++.+|......|++
T Consensus 248 ~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 248 KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp -CCEEEEECCC-CC------CCCSCSEEECGGGTSSCCCC
T ss_pred CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechhcCCCCC
Confidence 45999999999 9999999999999999999887666765
No 301
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=91.12 E-value=1.9 Score=39.83 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=35.8
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
+...|+.+..+++. .++||+.-| +.+.+|++.+.+.|+|+|.+
T Consensus 202 ~~~~w~~i~~lr~~-~~~PvivK~-v~~~e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 202 ASFCWNDLSLLQSI-TRLPIILKG-ILTKEDAELAMKHNVQGIVV 244 (352)
T ss_dssp TTCCHHHHHHHHHH-CCSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcCCCEEEE
Confidence 45679999888775 589997665 68999999999999999987
No 302
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=91.02 E-value=0.55 Score=42.40 Aligned_cols=68 Identities=7% Similarity=-0.028 Sum_probs=48.3
Q ss_pred HHHHHHhCCCCEEEEecCC----cccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEE
Q 023442 64 IYKVSSLSPTRHFIIHSRK----ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 139 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt----~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgV 139 (282)
+++..+++|++.|.+-.+. ...+|.. .....+++.++.+. .++||++-+.+...++++.+.+.|||.|
T Consensus 33 ~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~-------R~~~~~~i~~i~~~-v~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 33 QAKIAEKAGAIGVMILENIPSELRNTDGVA-------RSVDPLKIEEIRKC-ISINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp HHHHHHHHTCSEEEECCCCC-----CCCCC-------CCCCHHHHHHHHTT-CCSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEecCCCCcchhcCCcc-------cCCCHHHHHHHHHh-cCCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 3567889999999987321 1223311 01126788787764 6999999888888888888888999999
No 303
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=90.59 E-value=0.1 Score=44.43 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=32.6
Q ss_pred CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
++||+.-|||. ++.+.++++.|+|+|.+||++...+.
T Consensus 163 ~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~d 199 (216)
T 1q6o_A 163 GFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRDAAS 199 (216)
T ss_dssp TCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHTSSC
T ss_pred CCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcCCCC
Confidence 68899999997 78888888899999999999987554
No 304
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=90.54 E-value=2.2 Score=41.23 Aligned_cols=42 Identities=19% Similarity=0.360 Sum_probs=34.3
Q ss_pred CccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 98 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
...|+.+..+++. .++||+.-| +.++++++.+.+.|+|+|.+
T Consensus 329 ~~~~~~i~~lr~~-~~~PvivKg-v~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 329 SLTWKDIEELKKK-TKLPIVIKG-VQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp TCCHHHHHHHHHH-CSSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred HhHHHHHHHHHHH-hCCcEEEEe-CCCHHHHHHHHHcCCCEEEE
Confidence 4468888777765 489998764 66899999988899999999
No 305
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.54 E-value=0.71 Score=41.70 Aligned_cols=107 Identities=8% Similarity=0.049 Sum_probs=60.6
Q ss_pred cccCCHHHHHHHHHHHhhc-CCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 20 SLMLDPKFVGEAMSVIAAN-TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 20 ~Ll~~p~~~~eiv~~v~~~-~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
.|....+.+.+| ++.+++ .+.++.|--|.--.....+++.++. ++.+.++|+|.|.+|+.+.
T Consensus 133 ~l~~~~e~~~ri-~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~R-a~ay~~AGAD~if~~~~~~--------------- 195 (298)
T 3eoo_A 133 ECVPAGEMVDRI-KAAVDARTDETFVIMARTDAAAAEGIDAAIER-AIAYVEAGADMIFPEAMKT--------------- 195 (298)
T ss_dssp CBCCHHHHHHHH-HHHHHHCSSTTSEEEEEECTHHHHHHHHHHHH-HHHHHHTTCSEEEECCCCS---------------
T ss_pred eecCHHHHHHHH-HHHHHhccCCCeEEEEeehhhhhcCHHHHHHH-HHhhHhcCCCEEEeCCCCC---------------
Confidence 344444455554 444443 3456666666411101124444444 3456789999999998531
Q ss_pred ccHHHHHHHHhcCCCceEEEc---cCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 99 LKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~n---GdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
.+.+.++++.. ++||.+| |+-...-+..++-+.|+.-|.+|-.++
T Consensus 196 --~ee~~~~~~~~-~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 196 --LDDYRRFKEAV-KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp --HHHHHHHHHHH-CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHH
T ss_pred --HHHHHHHHHHc-CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 35566776654 5888776 332111234445557999999986554
No 306
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=90.16 E-value=0.2 Score=58.06 Aligned_cols=42 Identities=26% Similarity=0.331 Sum_probs=37.0
Q ss_pred hcCCCceEEEccCCCCHHHHHHHH-----------HcCCCEEEecHHhhhCCc
Q 023442 109 RDFPDLTFTLNGGINTVDEVNAAL-----------RKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 109 ~~~~~ipVi~nGdI~s~eda~~~l-----------~~g~DgVmIGRgal~nP~ 150 (282)
++..++|||+.|||.+.+++..++ ..|||||.+|..++.-+.
T Consensus 602 r~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 602 RSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp TTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 445789999999999999999999 679999999999886653
No 307
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=90.10 E-value=3.1 Score=37.15 Aligned_cols=60 Identities=2% Similarity=-0.100 Sum_probs=39.2
Q ss_pred ccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCC-CcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 21 LMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~-~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
+.-..+.+...+++|...++.|+.+ .=+++-.. .+.++.++...++++++|++++.+-+.
T Consensus 75 ~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg 135 (281)
T 1oy0_A 75 VPISIDELIPLVRGVVRGAPHALVV-ADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGG 135 (281)
T ss_dssp SSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBS
T ss_pred CCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCc
Confidence 3344566777778888877756444 33444222 234555566678888899999999874
No 308
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=90.07 E-value=3.2 Score=38.21 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=63.7
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE--ecCCcccCCCCcCCcC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENR 94 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~V--H~Rt~~~~G~~~ad~~ 94 (282)
.||..+.+.+++.++- .+++||.+|.-. .. +.+|+... +..+...|...+++ || +..|.+..
T Consensus 195 IgAr~~~n~~LL~~va-----~~~kPVilk~G~--~~--tl~ei~~A-ve~i~~~GN~~viLceRG-~~typ~~~----- 258 (350)
T 1vr6_A 195 IGARNAQNFRLLSKAG-----SYNKPVLLKRGF--MN--TIEEFLLS-AEYIANSGNTKIILCERG-IRTFEKAT----- 258 (350)
T ss_dssp ECGGGTTCHHHHHHHH-----TTCSCEEEECCT--TC--CHHHHHHH-HHHHHHTTCCCEEEEECC-BCCSCCSS-----
T ss_pred ECcccccCHHHHHHHH-----ccCCcEEEcCCC--CC--CHHHHHHH-HHHHHHCCCCeEEEEeCC-CCCCCCcC-----
Confidence 5889999999877665 358999999643 21 34454443 33456788865555 33 22221110
Q ss_pred CCCCccHHHHHHHHhcCCCceEEE-----ccCCCC--HHHHHHHHHcCCCEEEecHHh
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFTL-----NGGINT--VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi~-----nGdI~s--~eda~~~l~~g~DgVmIGRga 145 (282)
...+++..+..+++. .++||++ +|+ .. .+-+......||||+||=+-.
T Consensus 259 -~~~vdl~ai~~lk~~-~~lpVi~dssHs~G~-~~~v~~~a~AAvA~GA~Gl~IE~H~ 313 (350)
T 1vr6_A 259 -RNTLDISAVPIIRKE-SHLPILVDPSHSGGR-RDLVIPLSRAAIAVGAHGIIVEVHP 313 (350)
T ss_dssp -SSBCCTTHHHHHHHH-BSSCEEECHHHHHCS-GGGHHHHHHHHHHHTCSEEEEEBCS
T ss_pred -hhhhhHHHHHHHHHh-hCCCEEEeCCCCCcc-cchHHHHHHHHHHhCCCEEEEEecC
Confidence 112345556566554 3789876 232 22 333444455799999997643
No 309
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.86 E-value=3 Score=36.69 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=63.0
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEE-EecCCcccCCCCcCCcCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFI-IHSRKALLNGISPAENRT 95 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~-VH~Rt~~~~G~~~ad~~~ 95 (282)
.||..+.+.+++.++.+ .++||.+|.-. .. +.+++...+ ..+...|...++ +|.....+.+..
T Consensus 112 Iga~~~~n~~ll~~~a~-----~~kPV~lk~G~--~~--t~~e~~~Av-~~i~~~Gn~~i~L~~RG~~~~~~y~------ 175 (262)
T 1zco_A 112 IGARNSQNFELLKEVGK-----VENPVLLKRGM--GN--TIQELLYSA-EYIMAQGNENVILCERGIRTFETAT------ 175 (262)
T ss_dssp ECGGGTTCHHHHHHHTT-----SSSCEEEECCT--TC--CHHHHHHHH-HHHHTTTCCCEEEEECCBCCSCCSS------
T ss_pred ECcccccCHHHHHHHHh-----cCCcEEEecCC--CC--CHHHHHHHH-HHHHHCCCCeEEEEECCCCCCCCcC------
Confidence 57888999888666544 58999998643 21 345555443 455678875554 462211111111
Q ss_pred CCCccHHHHHHHHhcCCCceEEEc----cCCCC-H-HHHHHHHHcCCCEEEecHHh
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLN----GGINT-V-DEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~n----GdI~s-~-eda~~~l~~g~DgVmIGRga 145 (282)
...+++..+..+++. .++||++. +|... . .-+......|+||+||=+-.
T Consensus 176 ~~~v~L~ai~~lk~~-~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 176 RFTLDISAVPVVKEL-SHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp SSBCCTTHHHHHHHH-BSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred hhhcCHHHHHHHHhh-hCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 112344555556554 37898653 22222 1 22334445899999998653
No 310
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.76 E-value=4.3 Score=34.77 Aligned_cols=87 Identities=17% Similarity=0.122 Sum_probs=57.4
Q ss_pred HHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc
Q 023442 31 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 110 (282)
Q Consensus 31 iv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~ 110 (282)
+++.+++. |+..=+|. ++.++..++ ++.+.+.|++.|.+--++.. ..+.+++++++
T Consensus 10 ~~~~l~~~---~ii~vir~--~~~~~~~~~----~~al~~gGv~~iel~~k~~~---------------~~~~i~~l~~~ 65 (224)
T 1vhc_A 10 IIEKLREL---KIVPVIAL--DNADDILPL----ADTLAKNGLSVAEITFRSEA---------------AADAIRLLRAN 65 (224)
T ss_dssp HHHHHHHH---CEEEEECC--SSGGGHHHH----HHHHHHTTCCEEEEETTSTT---------------HHHHHHHHHHH
T ss_pred HHHHHHHC---CeEEEEeC--CCHHHHHHH----HHHHHHcCCCEEEEeccCch---------------HHHHHHHHHHh
Confidence 44445443 45444674 332333333 34456899999999765420 14566677777
Q ss_pred CCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 111 FPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 111 ~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++++- ++.|-+.+.++++.+++.|+|+|+.+
T Consensus 66 ~~~l~-vgaGtvl~~d~~~~A~~aGAd~v~~p 96 (224)
T 1vhc_A 66 RPDFL-IAAGTVLTAEQVVLAKSSGADFVVTP 96 (224)
T ss_dssp CTTCE-EEEESCCSHHHHHHHHHHTCSEEECS
T ss_pred CcCcE-EeeCcEeeHHHHHHHHHCCCCEEEEC
Confidence 76654 56667889999999999999999988
No 311
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=89.74 E-value=0.26 Score=42.44 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=47.1
Q ss_pred HhCCCCEEEEec-CCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHhhh
Q 023442 69 SLSPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 147 (282)
Q Consensus 69 e~~Gv~~i~VH~-Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal~ 147 (282)
.+.|++.+.+|. +.....|... ++.....+++... .+++|...||| +++++..+.+.|+|.+.+||++..
T Consensus 131 ~~~~~~~~v~~~a~~~~~~Gvv~------s~~e~~~ir~~~~--~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~ 201 (221)
T 3exr_A 131 LDAGISQAIYHQSRDALLAGETW------GEKDLNKVKKLIE--MGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITE 201 (221)
T ss_dssp HHTTCCEEEEECCHHHHHHTCCC------CHHHHHHHHHHHH--HTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHT
T ss_pred HcCCHHHHHHHHHHhcCCCcccc------CHHHHHHHHHhhc--CCceEEEECCC-CHHHHHHHHHCCCCEEEECchhhC
Confidence 357899988883 3222234210 1111223333332 36889999999 778888777799999999999876
Q ss_pred CCc
Q 023442 148 NPW 150 (282)
Q Consensus 148 nP~ 150 (282)
.+.
T Consensus 202 a~d 204 (221)
T 3exr_A 202 AKN 204 (221)
T ss_dssp SSS
T ss_pred CCC
Confidence 554
No 312
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=89.24 E-value=0.53 Score=43.79 Aligned_cols=44 Identities=14% Similarity=0.244 Sum_probs=36.8
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
|...|+.+.++++. .++||+.-| |.++++++.+.+.|+|+|.++
T Consensus 210 p~~~~~~i~~i~~~-~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 210 ASFNWEALRWLRDL-WPHKLLVKG-LLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp TTCCHHHHHHHHHH-CCSEEEEEE-ECCHHHHHHHHHTTCSEEEEC
T ss_pred ccccHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcCCCEEEEc
Confidence 45568888888776 489998764 899999999999999999993
No 313
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.09 E-value=3.1 Score=36.94 Aligned_cols=58 Identities=10% Similarity=0.116 Sum_probs=42.4
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
.-..+.+...++.|...+++||++.+-.|+.. +.++..+.+. .+.++|+.++.+-+..
T Consensus 58 ~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~--~~~~~~~~v~-~l~~aGaagv~iED~~ 115 (275)
T 2ze3_A 58 TLTRDEMGREVEAIVRAVAIPVNADIEAGYGH--APEDVRRTVE-HFAALGVAGVNLEDAT 115 (275)
T ss_dssp SSCHHHHHHHHHHHHHHCSSCEEEECTTCSSS--SHHHHHHHHH-HHHHTTCSEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEeecCCCCCC--CHHHHHHHHH-HHHHcCCcEEEECCCc
Confidence 44567777888888888899999999999753 2334445444 4457999999997643
No 314
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=89.07 E-value=2.5 Score=35.22 Aligned_cols=82 Identities=11% Similarity=0.071 Sum_probs=52.1
Q ss_pred CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCce-EEE
Q 023442 40 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT-FTL 118 (282)
Q Consensus 40 ~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ip-Vi~ 118 (282)
..|+..=+|. . + .+++.+. ++.+.+.|++.|.+.-.+. + ..+.+.++.+.+ ++| +++
T Consensus 6 ~~~i~~~i~~-~-d---~~~~~~~-~~~~~~~G~~~i~l~~~~~--------~-------~~~~i~~i~~~~-~~~l~vg 63 (212)
T 2v82_A 6 KLPLIAILRG-I-T---PDEALAH-VGAVIDAGFDAVEIPLNSP--------Q-------WEQSIPAIVDAY-GDKALIG 63 (212)
T ss_dssp SSCEEEECTT-C-C---HHHHHHH-HHHHHHHTCCEEEEETTST--------T-------HHHHHHHHHHHH-TTTSEEE
T ss_pred CCCEEEEEeC-C-C---HHHHHHH-HHHHHHCCCCEEEEeCCCh--------h-------HHHHHHHHHHhC-CCCeEEE
Confidence 4566655552 2 2 2344443 3456688999998854321 0 134555665543 344 457
Q ss_pred ccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 119 NGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 119 nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
.|.+.+.+++..+++.|+|+|.+|.
T Consensus 64 ~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 64 AGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp EECCCSHHHHHHHHHTTCCEEECSS
T ss_pred eccccCHHHHHHHHHcCCCEEEeCC
Confidence 7889999999999999999998764
No 315
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=89.05 E-value=0.23 Score=47.92 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=46.3
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCC-ceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~-ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
.+.+.|++.+.+|... |.. . --++.+..+.+..++ +||+ .|+|.|.++++.+.+.|+|+|.+|.+
T Consensus 249 ~l~e~gv~~l~Vd~~~----g~~--~------~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~~ 314 (503)
T 1me8_A 249 ALVEAGADVLCIDSSD----GFS--E------WQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGIG 314 (503)
T ss_dssp HHHHHTCSEEEECCSC----CCS--H------HHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHhhhccceEEeccc----Ccc--c------chhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEeccc
Confidence 3456799999998642 211 0 015556556555456 7877 59999999999999999999988764
No 316
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=88.95 E-value=5.9 Score=36.06 Aligned_cols=44 Identities=7% Similarity=0.055 Sum_probs=34.5
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVM 140 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVm 140 (282)
+++-+++...++.+. .++||.+.=.+.|.+|+.++++ ..+|.|+
T Consensus 223 ~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~ 267 (370)
T 2chr_A 223 VGRENTQALRRLSDN-NRVAIMADESLSTLASAFDLARDRSVDVFS 267 (370)
T ss_dssp SCSSCHHHHHHHHHH-CSSEEEESSSCCSHHHHHHHHTTTCCSEEC
T ss_pred CChhhhhhhhHHhhh-ccCCccCCccCCCHHHHHHHHHcCCCcEEE
Confidence 344457777777765 5899998888999999999998 5678663
No 317
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=88.42 E-value=4 Score=38.04 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=62.9
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEE-EecCCcccCCCCcCCcCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFI-IHSRKALLNGISPAENRT 95 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~-VH~Rt~~~~G~~~ad~~~ 95 (282)
.||..+.+.+++.. +. .+++||.+|.-. . .+.+|+... +..+.+.|..-|+ +|..+..|... +.
T Consensus 231 Igs~~~~n~~LL~~----~a-~~gkPVilk~G~--~--~t~~e~~~A-ve~i~~~Gn~~i~L~~rG~s~yp~~-~~---- 295 (385)
T 3nvt_A 231 IGARNMQNFELLKA----AG-RVDKPILLKRGL--S--ATIEEFIGA-AEYIMSQGNGKIILCERGIRTYEKA-TR---- 295 (385)
T ss_dssp ECGGGTTCHHHHHH----HH-TSSSCEEEECCT--T--CCHHHHHHH-HHHHHTTTCCCEEEEECCBCCSCCS-SS----
T ss_pred ECcccccCHHHHHH----HH-ccCCcEEEecCC--C--CCHHHHHHH-HHHHHHcCCCeEEEEECCCCCCCCC-Cc----
Confidence 47888999866544 33 358999999643 2 234555543 3456678885454 56435443211 11
Q ss_pred CCCccHHHHHHHHhcCCCceEEEc----cCCCCH--HHHHHHHHcCCCEEEecH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLN----GGINTV--DEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~n----GdI~s~--eda~~~l~~g~DgVmIGR 143 (282)
..+++..+..+++.+ ++||+.. +|-... .-+..+...||||+||=+
T Consensus 296 -~~ldl~~i~~lk~~~-~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 296 -NTLDISAVPILKKET-HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp -SBCCTTHHHHHHHHB-SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred -cccCHHHHHHHHHhc-CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 123455565665543 7898653 121111 234445558999999975
No 318
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=88.36 E-value=3.1 Score=38.49 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=34.9
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
++-+++...++.+. .++||.+.-.+.|.+|+.++++ ..+|.|.+
T Consensus 237 ~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 237 GTKDFVDHAWLQKQ-LKTRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp CSSCSHHHHHHHTT-CSSEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCcCHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 34456767777664 5899999999999999999998 56888766
No 319
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.32 E-value=6.5 Score=35.22 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=42.1
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
.-..+.+...++.|...++.||++.+-.|+.. +.+.+.+.+. .+.++|++.|.+-+..
T Consensus 60 ~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~--~~~~~~~~v~-~l~~aGa~gv~iEd~~ 117 (295)
T 1xg4_A 60 ISTLDDVLTDIRRITDVCSLPLLVDADIGFGS--SAFNVARTVK-SMIKAGAAGLHIEDQV 117 (295)
T ss_dssp CSCHHHHHHHHHHHHHHCCSCEEEECTTCSSS--SHHHHHHHHH-HHHHHTCSEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhhCCCCEEecCCcccCC--CHHHHHHHHH-HHHHcCCeEEEECCCC
Confidence 34566777888888888899999999999752 2334455444 4557999999997643
No 320
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.13 E-value=5.4 Score=34.17 Aligned_cols=91 Identities=13% Similarity=0.072 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHH
Q 023442 27 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 106 (282)
Q Consensus 27 ~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~ 106 (282)
...++++.+.+. |+..=+|. ++.+...++ ++.+.+.|++.|.+.-++.. ..+.+.+
T Consensus 15 ~~~~~~~~l~~~---~ii~V~r~--~~~~~~~~~----~~al~~gGv~~iel~~k~~~---------------~~~~i~~ 70 (225)
T 1mxs_A 15 KAARIDAICEKA---RILPVITI--AREEDILPL----ADALAAGGIRTLEVTLRSQH---------------GLKAIQV 70 (225)
T ss_dssp HHHHHHHHHHHH---SEEEEECC--SCGGGHHHH----HHHHHHTTCCEEEEESSSTH---------------HHHHHHH
T ss_pred hHHHHHHHHHHC---CEEEEEeC--CCHHHHHHH----HHHHHHCCCCEEEEecCCcc---------------HHHHHHH
Confidence 355566666554 45444663 232333333 34456899999999765321 1455666
Q ss_pred HHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 107 LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 107 l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++++++++. ++.|-+.+.+++..+++.|+|+|..|
T Consensus 71 l~~~~~~~~-igagtvl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 71 LREQRPELC-VGAGTVLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp HHHHCTTSE-EEEECCCSHHHHHHHHHHTCSSEECS
T ss_pred HHHhCcccE-EeeCeEeeHHHHHHHHHCCCCEEEeC
Confidence 777777665 46667999999999999999999987
No 321
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=88.12 E-value=2.7 Score=38.49 Aligned_cols=43 Identities=9% Similarity=0.043 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgV 139 (282)
+++-+++...++.+. .++||.+.=.+.|..|+.++++ ..+|.|
T Consensus 223 ~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~i 266 (378)
T 4hpn_A 223 VVPEQLDAYARVRAG-QPIPVAGGETWHGRYGMWQALSAGAVDIL 266 (378)
T ss_dssp SCTTCHHHHHHHHHH-SSSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCccchhhhHHHHhh-CCceeeCCcCccchHhHHHHHHcCCCCEE
Confidence 344457777777765 5899999889999999999998 668876
No 322
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=87.75 E-value=1.3 Score=39.26 Aligned_cols=112 Identities=14% Similarity=0.118 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC--cccCCCCcCCcCCCCCc-----
Q 023442 27 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK--ALLNGISPAENRTIPPL----- 99 (282)
Q Consensus 27 ~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt--~~~~G~~~ad~~~i~~~----- 99 (282)
.+.+.++.+++.-...+..=+-.|+.+.+ .+.+ +.+.++++|+|.|.+---. .. +|+..|...
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~---~~~~-~~~~l~~~GaD~iElgiPfSDP~------aDGp~Iq~a~~~AL 73 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPE---LSLK-IIQTLVDNGADALELGFPFSDPL------ADGPVIQGANLRSL 73 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHH---HHHH-HHHHHHHTTCSSEEEECCCSCCT------TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHH---HHHH-HHHHHHHcCCCEEEECCCCCCCC------CCCHHHHHHHHHHH
Confidence 35566666665434444444446665433 3333 3456789999999886211 11 122111111
Q ss_pred --------cHHHHHHHHhcCCCceEEEccCCCC-----HHHH-HHHHHcCCCEEEecHHhhhC
Q 023442 100 --------KYEYYYALLRDFPDLTFTLNGGINT-----VDEV-NAALRKGAHHVMVGRAAYQN 148 (282)
Q Consensus 100 --------~~~~i~~l~~~~~~ipVi~nGdI~s-----~eda-~~~l~~g~DgVmIGRgal~n 148 (282)
-++.+.++.+..+++||+.-|-.+. .+.. +++.+.|+|||.+.--.+..
T Consensus 74 ~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee 136 (267)
T 3vnd_A 74 AAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEE 136 (267)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGG
T ss_pred HcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh
Confidence 1455566655446899988654321 2433 34444899999996444433
No 323
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=87.73 E-value=2.4 Score=39.14 Aligned_cols=42 Identities=17% Similarity=0.313 Sum_probs=34.9
Q ss_pred CccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 98 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
...|+.+..+++. .++||+.-| |.++++++.+.+.|+|+|.+
T Consensus 215 ~~~~~~i~~lr~~-~~~PvivK~-v~~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 215 KISPRDIEEIAGH-SGLPVFVKG-IQHPEDADMAIKRGASGIWV 256 (368)
T ss_dssp BCCHHHHHHHHHH-SSSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hhhHHHHHHHHHH-cCCCEEEEc-CCCHHHHHHHHHcCCCEEEE
Confidence 4568888888765 489998764 68999999999999999988
No 324
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.91 E-value=3 Score=37.57 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=62.7
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||..+++.+++.++ . .+++||.+|.-... +.+|+... +..+.+.|.+.|++--|+-.| +. ++
T Consensus 137 IgA~~~~n~~LLr~v----a-~~gkPVilK~Gms~----t~~ei~~a-ve~i~~~Gn~~iiL~erg~~y-~~---~~--- 199 (298)
T 3fs2_A 137 IPAFLCRQTDLLIAA----A-RTGRVVNVKKGQFL----APWDMKNV-LAKITESGNPNVLATERGVSF-GY---NT--- 199 (298)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTSEEEEECCTTC----CGGGHHHH-HHHHHTTTCCCEEEEECCEEC-SS---SC---
T ss_pred ECccccCCHHHHHHH----H-ccCCcEEEeCCCCC----CHHHHHHH-HHHHHHcCCCeEEEEECCCCC-CC---CC---
Confidence 588899999975553 2 35899999965421 12233332 334567888777764444333 21 11
Q ss_pred CCccHHHHHHHHhcCCCceEEEc---------------cCCCC--HHHHHHHHHcCCCEEEecHHh
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~n---------------GdI~s--~eda~~~l~~g~DgVmIGRga 145 (282)
.-+++..+..+++ + ++||+.. ||... +.-+..+...||||+||=+-.
T Consensus 200 ~~vdl~~i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 200 LVSDMRALPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp EECCTTHHHHHHT-T-TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred CccCHHHHHHHHH-c-CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 0123455555554 4 8999883 22111 233444555899999986543
No 325
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.84 E-value=1.9 Score=38.26 Aligned_cols=106 Identities=15% Similarity=0.113 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC--cccCCCCcCCcCCCCC------
Q 023442 27 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK--ALLNGISPAENRTIPP------ 98 (282)
Q Consensus 27 ~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt--~~~~G~~~ad~~~i~~------ 98 (282)
.+.+.++.+++.-...+..=+-.|+.+.+ ...+ +.+.++++|+|.|.+---. .. +|+..|..
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~---~~~~-~~~~l~~~GaD~iElGiPfSDP~------aDGpvIq~a~~rAL 75 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPE---QSLA-IMQTLIDAGADALELGMPFSDPL------ADGPTIQGANLRAL 75 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHH---HHHH-HHHHHHHTTCSSEEEECCCCCGG------GCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHH---HHHH-HHHHHHHcCCCEEEECCCCCCCC------CCCHHHHHHHHHHH
Confidence 35566677665433344444456765533 3333 3456788999999985321 11 12111110
Q ss_pred ---c----cHHHHHHHHhcCCCceEEEccCCC-----CHHH-HHHHHHcCCCEEEec
Q 023442 99 ---L----KYEYYYALLRDFPDLTFTLNGGIN-----TVDE-VNAALRKGAHHVMVG 142 (282)
Q Consensus 99 ---~----~~~~i~~l~~~~~~ipVi~nGdI~-----s~ed-a~~~l~~g~DgVmIG 142 (282)
+ -++.+.++.++.+++||+.-|-.+ ..+. ++++.+.|+|||.+.
T Consensus 76 ~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 76 AAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred HcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 0 145566666555789998866432 2243 344445899999995
No 326
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.79 E-value=6.2 Score=33.45 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=57.5
Q ss_pred HHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc
Q 023442 31 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 110 (282)
Q Consensus 31 iv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~ 110 (282)
+++.+.+. |+..=+|. ++.++..++ ++.+.+.|++.|.+.-++.. ..+.+.+++++
T Consensus 9 ~~~~l~~~---~~i~v~r~--~~~~~~~~~----~~al~~gGv~~iel~~k~~~---------------~~~~i~~l~~~ 64 (214)
T 1wbh_A 9 AESILTTG---PVVPVIVV--KKLEHAVPM----AKALVAGGVRVLNVTLRTEC---------------AVDAIRAIAKE 64 (214)
T ss_dssp HHHHHHSC---SEEEEECC--SSGGGHHHH----HHHHHHTTCCEEEEESCSTT---------------HHHHHHHHHHH
T ss_pred HHHHHHHC---CEEEEEEC--CCHHHHHHH----HHHHHHcCCCEEEEeCCChh---------------HHHHHHHHHHH
Confidence 44555443 55444664 222333333 34456899999999865421 14566667777
Q ss_pred CCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 111 FPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 111 ~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++++ +++.|-+.+.++++.+++.|+|+|..|
T Consensus 65 ~~~~-~vgagtvi~~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 65 VPEA-IVGAGTVLNPQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp CTTS-EEEEESCCSHHHHHHHHHHTCSCEEES
T ss_pred CcCC-EEeeCEEEEHHHHHHHHHcCCCEEEcC
Confidence 7665 456677999999999999999999988
No 327
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=86.74 E-value=16 Score=32.34 Aligned_cols=76 Identities=7% Similarity=-0.032 Sum_probs=50.5
Q ss_pred cCCHHHHHHHHHHHhhcC-CccEEEEecCC-CCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANT-NVPVSVKCRIG-VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~-~ipvsvKiR~G-~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
.-..+.+..-+++|+..+ +.||.+.+-.| + . +.++.++.+.+++ ++|++++.+-+...
T Consensus 71 ~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY-~--s~~~a~~~a~rl~-kaGa~aVklEdg~~---------------- 130 (275)
T 3vav_A 71 PVTLDDIAYHTACVARAQPRALIVADLPFGTY-G--TPADAFASAVKLM-RAGAQMVKFEGGEW---------------- 130 (275)
T ss_dssp TCCHHHHHHHHHHHHHTCCSSEEEEECCTTSC-S--SHHHHHHHHHHHH-HTTCSEEEEECCGG----------------
T ss_pred ccCHHHHHHHHHHHHhcCCCCCEEEecCCCCC-C--CHHHHHHHHHHHH-HcCCCEEEECCchh----------------
Confidence 344566677778888877 58999999875 6 2 3345556555555 46999999887421
Q ss_pred cHHHHHHHHhcCCCceEEEc
Q 023442 100 KYEYYYALLRDFPDLTFTLN 119 (282)
Q Consensus 100 ~~~~i~~l~~~~~~ipVi~n 119 (282)
..+.++.+.+ ..|||++.
T Consensus 131 ~~~~i~~l~~--~GIpv~gH 148 (275)
T 3vav_A 131 LAETVRFLVE--RAVPVCAH 148 (275)
T ss_dssp GHHHHHHHHH--TTCCEEEE
T ss_pred HHHHHHHHHH--CCCCEEEe
Confidence 0345666655 37888863
No 328
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=86.74 E-value=11 Score=33.54 Aligned_cols=58 Identities=7% Similarity=-0.044 Sum_probs=38.0
Q ss_pred ccCCHHHHHHHHHHHhhcCCc-cEEEEecCCCCCC-CcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 21 LMLDPKFVGEAMSVIAANTNV-PVSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~~~i-pvsvKiR~G~d~~-~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
+.-..+.+...+++|+..++. +|.+.+- +-.. .+.++.++.+.+++ ++|++++.+-+.
T Consensus 58 ~~vTldemi~h~~aV~r~~~~~~vvaD~p--fgsy~~s~~~a~~na~rl~-kaGa~aVklEdg 117 (275)
T 1o66_A 58 LPVSLRDMCYHTECVARGAKNAMIVSDLP--FGAYQQSKEQAFAAAAELM-AAGAHMVKLEGG 117 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHCSSSEEEEECC--TTSSSSCHHHHHHHHHHHH-HTTCSEEEEECS
T ss_pred CCCCHHHHHHHHHHHHhhCCCCeEEEECC--CCCccCCHHHHHHHHHHHH-HcCCcEEEECCc
Confidence 444567778888888888775 5666644 4222 23455565555555 499999999874
No 329
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=86.53 E-value=1.1 Score=38.65 Aligned_cols=68 Identities=19% Similarity=0.276 Sum_probs=44.8
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCH-HHHHHHHHcCCCEEEec
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DEVNAALRKGAHHVMVG 142 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~-eda~~~l~~g~DgVmIG 142 (282)
++++++++|++.+.+.+.. -+.+..+.+..++ -++..+||.-- .+..++++.|+|.+.||
T Consensus 127 ~a~~a~~~g~~GvV~sat~------------------p~e~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVG 187 (222)
T 4dbe_A 127 IKNVIREISPKGIVVGGTK------------------LDHITQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYEIIG 187 (222)
T ss_dssp HHHHHHHHCCSEEEECTTC------------------HHHHHHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEEEEC
T ss_pred HHHHHHHhCCCEEEECCCC------------------HHHHHHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEEEEC
Confidence 5667788999988876521 0223334444455 46677887531 14555566899999999
Q ss_pred HHhhhCCc
Q 023442 143 RAAYQNPW 150 (282)
Q Consensus 143 Rgal~nP~ 150 (282)
|+++..+.
T Consensus 188 R~I~~A~d 195 (222)
T 4dbe_A 188 RSIYNAGN 195 (222)
T ss_dssp HHHHTSSS
T ss_pred HHhcCCCC
Confidence 99988766
No 330
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=86.42 E-value=5.2 Score=35.87 Aligned_cols=107 Identities=8% Similarity=0.000 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHHhhcC-CccEEEEecCCCC-CCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANT-NVPVSVKCRIGVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d-~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
...+...+-|++++++. +.++.|--|.--. ....+++.++. ++.++++|+|.|.+++....
T Consensus 133 ~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R-a~ay~eAGAd~i~~e~~~~~---------------- 195 (295)
T 1s2w_A 133 ADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKR-AEAYRNAGADAILMHSKKAD---------------- 195 (295)
T ss_dssp CCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHH-HHHHHHTTCSEEEECCCSSS----------------
T ss_pred cCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHH-HHHHHHcCCCEEEEcCCCCC----------------
Confidence 33444444455555543 3344444453111 11124555554 45678999999999963210
Q ss_pred HHHHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 101 YEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 101 ~~~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
.+.+.++.+... .+|+++|-.-+..-+..++-+.|+.-|.+|-.++
T Consensus 196 ~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 196 PSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNL 242 (295)
T ss_dssp SHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHH
Confidence 233445555431 3899998432111135556668999999985554
No 331
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.41 E-value=2.8 Score=38.11 Aligned_cols=101 Identities=8% Similarity=-0.006 Sum_probs=59.5
Q ss_pred cCCHHHHHHHHHHHhhcC-CccEEEEecCCCCCC--CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 22 MLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~--~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
+...+...+-|++++++. +.++.|--|. |.. ..+++.++. ++.++++|+|.|.+++-+.
T Consensus 152 L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt--da~a~~gl~~ai~R-a~Ay~eAGAd~i~~e~~~~--------------- 213 (318)
T 1zlp_A 152 VVPAEEHALKIAAAREAIGDSDFFLVART--DARAPHGLEEGIRR-ANLYKEAGADATFVEAPAN--------------- 213 (318)
T ss_dssp BCCHHHHHHHHHHHHHHHTTSCCEEEEEE--CTHHHHHHHHHHHH-HHHHHHTTCSEEEECCCCS---------------
T ss_pred cCCHHHHHHHHHHHHHhcccCCcEEEEee--HHhhhcCHHHHHHH-HHHHHHcCCCEEEEcCCCC---------------
Confidence 444444455556655543 3345454453 211 113455554 4567899999999998421
Q ss_pred ccHHHHHHHHhcCCCceEEEc---c---CCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 99 LKYEYYYALLRDFPDLTFTLN---G---GINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~n---G---dI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
.+.+.++.+.. ++|+.+| | ...| ..++-+.|+.-|.+|-.++
T Consensus 214 --~e~~~~i~~~l-~~P~lan~~~~g~~~~~~---~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 214 --VDELKEVSAKT-KGLRIANMIEGGKTPLHT---PEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp --HHHHHHHHHHS-CSEEEEEECTTSSSCCCC---HHHHHHHTCCEEEECSHHH
T ss_pred --HHHHHHHHHhc-CCCEEEEeccCCCCCCCC---HHHHHHcCCeEEEEchHHH
Confidence 35566777764 7999665 3 2344 4445557999999986554
No 332
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=86.28 E-value=2.2 Score=38.29 Aligned_cols=78 Identities=19% Similarity=0.114 Sum_probs=46.3
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+.|-|+.....+..+ +.+.+...++. ...+||| +.|+..+.+-++.... .|+|+||
T Consensus 44 ~~li~~Gv~gl~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavl 116 (304)
T 3cpr_A 44 AYLVDKGLDSLVLAGTTGESPTTTAAE-------KLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLL 116 (304)
T ss_dssp HHHHHTTCCEEEESSTTTTTTTSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 344578999999999876433332211 12223333332 1368986 5666555444443332 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 117 v~~P~y~~~~ 126 (304)
T 3cpr_A 117 VVTPYYSKPS 126 (304)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977776664
No 333
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=86.19 E-value=7.3 Score=34.80 Aligned_cols=114 Identities=13% Similarity=0.063 Sum_probs=65.8
Q ss_pred cCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCCCcCCcCCCCCcc
Q 023442 22 MLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK 100 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-~~~G~~~ad~~~i~~~~ 100 (282)
.-..+.+...++.|...+++||++.+-.|+.+ .++..+.+. .+.++|++++.+-+... .-.|.. .+. +-+..
T Consensus 64 ~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~---~~~~~~~v~-~l~~aGa~gv~iED~~~pKrcgh~--~gk-l~~~~ 136 (287)
T 3b8i_A 64 LITLSEFVEQATRIGRVARLPVIADADHGYGN---ALNVMRTVV-ELERAGIAALTIEDTLLPAQFGRK--STD-LICVE 136 (287)
T ss_dssp CSCHHHHHHHHHHHHTTCSSCEEEECTTCSSS---HHHHHHHHH-HHHHHTCSEEEEECBCCSCCTTTC--TTC-BCCHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC---HHHHHHHHH-HHHHhCCeEEEEcCCCCccccCCC--CCC-ccCHH
Confidence 34567778888899888999999999998753 344555544 44579999999976431 111221 112 22221
Q ss_pred --HHHHHHHHhcC--CCceEEEccCC--C----CHHHHHHHHHcCCCEEEec
Q 023442 101 --YEYYYALLRDF--PDLTFTLNGGI--N----TVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 101 --~~~i~~l~~~~--~~ipVi~nGdI--~----s~eda~~~l~~g~DgVmIG 142 (282)
.+.|+.+++.. ++.-|++=-|- . ..++++.+.+.|||+|++=
T Consensus 137 e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e 188 (287)
T 3b8i_A 137 EGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLV 188 (287)
T ss_dssp HHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEec
Confidence 12233333322 34455554333 1 2333444444899999884
No 334
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.09 E-value=2.5 Score=38.01 Aligned_cols=80 Identities=9% Similarity=-0.007 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEE-EccCCCCHHHHHHHHH--
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LNGGINTVDEVNAALR-- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi-~nGdI~s~eda~~~l~-- 133 (282)
++.+.+. .+.+.+.|++.|.+-|-|......+... +.+.+...++...++||| +.|.. |.+++.++.+
T Consensus 28 ~~~l~~l-v~~li~~Gv~Gl~v~GtTGE~~~Lt~~E-------r~~v~~~~v~~~grvpViaGvg~~-~t~~ai~la~~A 98 (313)
T 3dz1_A 28 DVSIDRL-TDFYAEVGCEGVTVLGILGEAPKLDAAE-------AEAVATRFIKRAKSMQVIVGVSAP-GFAAMRRLARLS 98 (313)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEESTGGGTGGGSCHHH-------HHHHHHHHHHHCTTSEEEEECCCS-SHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHCCCCEEEeCccCcChhhCCHHH-------HHHHHHHHHHHcCCCcEEEecCCC-CHHHHHHHHHHH
Confidence 4344333 3445579999999999775433222111 122333334433468987 45555 4444444432
Q ss_pred --cCCCEEEecHHh
Q 023442 134 --KGAHHVMVGRAA 145 (282)
Q Consensus 134 --~g~DgVmIGRga 145 (282)
.|+|+||+--..
T Consensus 99 ~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 99 MDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHTCSEEEECCCT
T ss_pred HHcCCCEEEECCCC
Confidence 799999997543
No 335
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=86.06 E-value=1.6 Score=37.90 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=29.5
Q ss_pred CceEEEccCCCCHH-----------HHHHHHHcCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVD-----------EVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~e-----------da~~~l~~g~DgVmIGRgal~nP~ 150 (282)
+.+++..|||.. + .+.++++.|+|.+.+||+++..+.
T Consensus 182 ~~~i~v~gGI~~-~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 182 QEFKLVTPGIRP-QGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp SSSEEEECCBCC-TTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSS
T ss_pred CCCEEEECCcCC-CCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCC
Confidence 457889999963 3 466677889999999999988665
No 336
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=85.97 E-value=1.8 Score=39.24 Aligned_cols=102 Identities=13% Similarity=0.063 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHhhc---CCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 24 DPKFVGEAMSVIAAN---TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~---~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
..+...+-|++.+++ .+.++.|--|.---....+++.++. ++.+.++|+|.|.+++.+.
T Consensus 141 ~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~R-a~ay~eAGAD~ifi~~~~~----------------- 202 (307)
T 3lye_A 141 SRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIER-LRAARDEGADVGLLEGFRS----------------- 202 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHH-HHHHHHTTCSEEEECCCSC-----------------
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHH-HHHHHHCCCCEEEecCCCC-----------------
Confidence 343333334444433 2556666666411001124455554 3456789999999998431
Q ss_pred HHHHHHHHhcCCCceEEEc---cC---CCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 101 YEYYYALLRDFPDLTFTLN---GG---INTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~n---Gd---I~s~eda~~~l~~g~DgVmIGRgal 146 (282)
-+.+.++++....+||.+| |+ ..|. .++-+.|+.-|+.+-.++
T Consensus 203 ~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~---~eL~~lGv~~v~~~~~~~ 251 (307)
T 3lye_A 203 KEQAAAAVAALAPWPLLLNSVENGHSPLITV---EEAKAMGFRIMIFSFATL 251 (307)
T ss_dssp HHHHHHHHHHHTTSCBEEEEETTSSSCCCCH---HHHHHHTCSEEEEETTTH
T ss_pred HHHHHHHHHHccCCceeEEeecCCCCCCCCH---HHHHHcCCeEEEEChHHH
Confidence 3445566665445777665 33 2344 444446998888775444
No 337
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=85.92 E-value=14 Score=32.58 Aligned_cols=101 Identities=11% Similarity=0.002 Sum_probs=60.9
Q ss_pred cccCCHHHHHHHHHHHhhcCCc-cEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC
Q 023442 20 SLMLDPKFVGEAMSVIAANTNV-PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 98 (282)
Q Consensus 20 ~Ll~~p~~~~eiv~~v~~~~~i-pvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~ 98 (282)
.+.-..+.+..-+++|+..++. +|.+.+- +-...+.++.++.+.+++ ++|++++.+-+...
T Consensus 57 t~~vtldemi~h~~aV~r~~~~~~vvaD~p--fgsy~~~~~a~~~a~rl~-kaGa~aVklEgg~e--------------- 118 (264)
T 1m3u_A 57 TLPVTVADIAYHTAAVRRGAPNCLLLADLP--FMAYATPEQAFENAATVM-RAGANMVKIEGGEW--------------- 118 (264)
T ss_dssp STTCCHHHHHHHHHHHHHHCTTSEEEEECC--TTSSSSHHHHHHHHHHHH-HTTCSEEECCCSGG---------------
T ss_pred CCCcCHHHHHHHHHHHHhhCCCCcEEEECC--CCCcCCHHHHHHHHHHHH-HcCCCEEEECCcHH---------------
Confidence 3444557777778888888765 5666654 422224455666555555 49999998876421
Q ss_pred ccHHHHHHHHhcCCCceEEE-----------ccCC----CCHHHHHHHH-------HcCCCEEEe
Q 023442 99 LKYEYYYALLRDFPDLTFTL-----------NGGI----NTVDEVNAAL-------RKGAHHVMV 141 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~-----------nGdI----~s~eda~~~l-------~~g~DgVmI 141 (282)
.-+.++.+.+ ..|||++ .||. ++.+.+.+++ +.|||+|.+
T Consensus 119 -~~~~I~al~~--agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 119 -LVETVQMLTE--RAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp -GHHHHHHHHH--TTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred -HHHHHHHHHH--CCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 1344556655 3788873 4554 2444333333 369999877
No 338
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.85 E-value=9.3 Score=34.20 Aligned_cols=113 Identities=13% Similarity=0.168 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCCCcCCcCCCCCcc--H
Q 023442 25 PKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--Y 101 (282)
Q Consensus 25 p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~-~~~G~~~ad~~~i~~~~--~ 101 (282)
.+.+...++.|...+++||++.+-.|+.+ .+.+.+.+ +.+.++|+.+|.+-+... ...|.-+-....+-|.. .
T Consensus 64 ~~em~~~~~~I~~~~~~PviaD~d~Gyg~---~~~v~~~v-~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~ 139 (295)
T 1s2w_A 64 WTQVVEVLEFMSDASDVPILLDADTGYGN---FNNARRLV-RKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFA 139 (295)
T ss_dssp CHHHHHHHHHHHHTCSSCEEEECCSSCSS---HHHHHHHH-HHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEecCCCCCCC---HHHHHHHH-HHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHH
Confidence 34566777888888899999999999753 23455544 445689999999976431 11121000001112221 1
Q ss_pred HHHHHHHhc--CCCceEEEccCCC-C---HHH----HHHHHHcCCCEEEe
Q 023442 102 EYYYALLRD--FPDLTFTLNGGIN-T---VDE----VNAALRKGAHHVMV 141 (282)
Q Consensus 102 ~~i~~l~~~--~~~ipVi~nGdI~-s---~ed----a~~~l~~g~DgVmI 141 (282)
+.|+..+.. ..+.-|++=-|-. . .++ ++.+.+.|||+|++
T Consensus 140 ~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~ 189 (295)
T 1s2w_A 140 LKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILM 189 (295)
T ss_dssp HHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEE
Confidence 223333322 2345566655543 1 233 33334489999998
No 339
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=85.68 E-value=3.6 Score=36.31 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=54.6
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
++.. ++|+++|.|-.-..+++|. ++++.++.+ .+++||.--==|.++-++.+....|||+|.+==+
T Consensus 70 A~~~-~~GA~aiSVLTd~~~F~Gs------------~~~L~~vr~-~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a 135 (258)
T 4a29_A 70 AKFM-ERYAVGLSITTEEKYFNGS------------YETLRKIAS-SVSIPILMSDFIVKESQIDDAYNLGADTVLLIVK 135 (258)
T ss_dssp HHHH-TTTCSEEEEECCSTTTCCC------------HHHHHHHHT-TCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGG
T ss_pred HHHH-hCCCeEEEEeCCCCCCCCC------------HHHHHHHHH-hcCCCEeeccccccHHHHHHHHHcCCCeeehHHh
Confidence 4444 6899999998765566775 666766654 4689998776688999999988899999977656
Q ss_pred hhhCCcc
Q 023442 145 AYQNPWY 151 (282)
Q Consensus 145 al~nP~i 151 (282)
++.+..+
T Consensus 136 ~L~~~~l 142 (258)
T 4a29_A 136 ILTEREL 142 (258)
T ss_dssp GSCHHHH
T ss_pred hcCHHHH
Confidence 6655443
No 340
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=85.60 E-value=13 Score=33.58 Aligned_cols=57 Identities=21% Similarity=0.143 Sum_probs=42.1
Q ss_pred cCCHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 22 MLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
.-..+.+...++.|...+ ++||.+.+-.|+.+ .+...+.+. .+.++|+.+|.+-+..
T Consensus 82 ~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~---~~~v~~tv~-~l~~aGaagv~iED~~ 139 (318)
T 1zlp_A 82 LLTTTEVVEATRRITAAAPNLCVVVDGDTGGGG---PLNVQRFIR-ELISAGAKGVFLEDQV 139 (318)
T ss_dssp CSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSS---HHHHHHHHH-HHHHTTCCEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCC---HHHHHHHHH-HHHHcCCcEEEECCCC
Confidence 345667778888888888 99999999999753 344455444 4557999999997643
No 341
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=85.49 E-value=2.3 Score=37.95 Aligned_cols=84 Identities=6% Similarity=0.030 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|...+.+.++....
T Consensus 23 ~~~l~~lv-~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A 94 (294)
T 3b4u_A 23 IDAMIAHA-RRCLSNGCDSVTLFGTTGEGCSVGSRE-------RQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEA 94 (294)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHH
Confidence 33333333 344578999999999876433332111 122233333332 258886 5666554444433332
Q ss_pred --cCCCEEEecHHhhhC
Q 023442 134 --KGAHHVMVGRAAYQN 148 (282)
Q Consensus 134 --~g~DgVmIGRgal~n 148 (282)
.|+|+||+.-..+..
T Consensus 95 ~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 95 LNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHTTCSEEEECCCCSSC
T ss_pred HhcCCCEEEEcCCcCCC
Confidence 799999999777766
No 342
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.41 E-value=3.1 Score=37.33 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=44.7
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEEE-ccCCCCHHHHHHHHH---cCCCEE
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAALR---KGAHHV 139 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~-nGdI~s~eda~~~l~---~g~DgV 139 (282)
.+.+.+.|++.|.+-|-|......+..+ +.+.+...++.. ..+|||+ .|...+.+.++.... .|+|+|
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadav 113 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSE-------RLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAA 113 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3445689999999999875433232111 122333333432 3689864 565544444433322 799999
Q ss_pred EecHHhhhC
Q 023442 140 MVGRAAYQN 148 (282)
Q Consensus 140 mIGRgal~n 148 (282)
|+--..+..
T Consensus 114 lv~~P~y~~ 122 (307)
T 3s5o_A 114 MVVTPCYYR 122 (307)
T ss_dssp EEECCCTTG
T ss_pred EEcCCCcCC
Confidence 998666543
No 343
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=85.23 E-value=3.1 Score=36.99 Aligned_cols=86 Identities=13% Similarity=0.041 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHh-CCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH
Q 023442 57 YNQLCDFIYKVSSL-SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~-~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~ 133 (282)
.+.+.+.+ +.+.+ .|++.|.+.|-|+.....+... +.+.+...++. ..++||| +.|+..+.+.++....
T Consensus 23 ~~~l~~lv-~~li~~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 94 (293)
T 1f6k_A 23 EKGLRQII-RHNIDKMKVDGLYVGGSTGENFMLSTEE-------KKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKY 94 (293)
T ss_dssp HHHHHHHH-HHHHHTSCCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhhCCCcEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHH
Confidence 33343433 34456 8999999999775433332211 12223333322 1368986 5666555444433332
Q ss_pred ---cCCCEEEecHHhhhCCc
Q 023442 134 ---KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+--..+..|.
T Consensus 95 a~~~Gadavlv~~P~y~~~~ 114 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFYYKFS 114 (293)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 79999999977776664
No 344
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=85.11 E-value=2 Score=38.41 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=45.9
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-C-CceEEE-ccCCCCHHHHHHHHH----cCCCE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-P-DLTFTL-NGGINTVDEVNAALR----KGAHH 138 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~-~ipVi~-nGdI~s~eda~~~l~----~g~Dg 138 (282)
+.+.+.|++.|.+-|-|+.....+..+ +.+.+...++.. . ++|||+ .|+. |.+++.++.+ .|+|+
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~g~rvpviaGvg~~-~t~~ai~la~~a~~~Gada 106 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEE-------HRTCIEIAVETCKGTKVKVLAGAGSN-ATHEAVGLAKFAKEHGADG 106 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEEECCCS-SHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCCeEEEeCCCC-CHHHHHHHHHHHHHcCCCE
Confidence 345579999999999775433332111 122233333322 3 589875 5555 4444444432 79999
Q ss_pred EEecHHhhhCCc
Q 023442 139 VMVGRAAYQNPW 150 (282)
Q Consensus 139 VmIGRgal~nP~ 150 (282)
||+--..+..|.
T Consensus 107 vlv~~P~y~~~s 118 (301)
T 3m5v_A 107 ILSVAPYYNKPT 118 (301)
T ss_dssp EEEECCCSSCCC
T ss_pred EEEcCCCCCCCC
Confidence 999977777664
No 345
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=84.99 E-value=4.4 Score=37.17 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=33.4
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHH--HHHHHH-cCCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDE--VNAALR-KGAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~ed--a~~~l~-~g~DgVmI 141 (282)
++-+|+...++.+. .++||.+.=.+.|..| +.++++ ..+|.|.+
T Consensus 244 ~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~i 290 (377)
T 2pge_A 244 RQHQWSEMAALCAN-SPLAIALDEELIGLGAEQRSAMLDAIRPQYIIL 290 (377)
T ss_dssp CSSCHHHHHHHHHH-CSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEE
T ss_pred CcccHHHHHHHHhh-CCCcEEECCccCCcchHHHHHHHHhCCCCEEEE
Confidence 34457777777765 4799999888888888 678887 67887765
No 346
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=84.99 E-value=4.4 Score=36.49 Aligned_cols=99 Identities=9% Similarity=0.032 Sum_probs=59.9
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.=.++++.+.+.+ ++||.+-+ |- + ..+.++ +++.++++|+|++-+-.- .|...+..
T Consensus 57 GE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g~-~---t~~ai~-la~~A~~~Gadavlv~~P--~y~~~s~~---- 123 (316)
T 3e96_A 57 SEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--GY-A---TSTAIE-LGNAAKAAGADAVMIHMP--IHPYVTAG---- 123 (316)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CS-S---HHHHHH-HHHHHHHHTCSEEEECCC--CCSCCCHH----
T ss_pred cCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--Cc-C---HHHHHH-HHHHHHhcCCCEEEEcCC--CCCCCCHH----
Confidence 4333334555567777776655 58998876 42 2 345554 356678999999998742 22111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 124 ---~l~~~f~~va~a-~~lPiilYn~g~~l~~~~~~~La~ 159 (316)
T 3e96_A 124 ---GVYAYFRDIIEA-LDFPSLVYFKDPEISDRVLVDLAP 159 (316)
T ss_dssp ---HHHHHHHHHHHH-HTSCEEEEECCTTSCTHHHHHHTT
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEeCCCCCCHHHHHHHHc
Confidence 114566677665 368875 67 76678888887765
No 347
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=84.77 E-value=2.5 Score=37.68 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=46.1
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+..+.+.++.... .|+|+||
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavl 100 (294)
T 2ehh_A 28 EFHVDNGTDAILVCGTTGESPTLTFEE-------HEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGAL 100 (294)
T ss_dssp HHHHTTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHCCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 345579999999999876433332111 122233333321 368986 5666555444443332 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 101 v~~P~y~~~s 110 (294)
T 2ehh_A 101 VVVPYYNKPT 110 (294)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977776663
No 348
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.47 E-value=2.7 Score=37.30 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=46.5
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH---cCCCEEEec
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR---KGAHHVMVG 142 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~---~g~DgVmIG 142 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++...+ -|.+.|...+.+.++.... .|+|+||+-
T Consensus 26 ~~li~~Gv~gl~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 26 KNITSKGVDVVFVAGTTGLGPALSLQE-------KMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHH-------HHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHCCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 344579999999999876433332111 12233334443334 4567888766555544432 799999999
Q ss_pred HHhhhC-C
Q 023442 143 RAAYQN-P 149 (282)
Q Consensus 143 Rgal~n-P 149 (282)
-..+.. |
T Consensus 98 ~P~y~~~~ 105 (286)
T 2r91_A 98 PPYYFPRL 105 (286)
T ss_dssp CSCSSTTC
T ss_pred CCcCCCCC
Confidence 877766 5
No 349
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=84.41 E-value=3.3 Score=37.02 Aligned_cols=86 Identities=14% Similarity=0.165 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|+.....+... +.+.+...++. ..++||| +.|+..+.+.++....
T Consensus 32 ~~~l~~l-v~~li~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A 103 (301)
T 1xky_A 32 FAKTTKL-VNYLIDNGTTAIVVGGTTGESPTLTSEE-------KVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKA 103 (301)
T ss_dssp HHHHHHH-HHHHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHH
Confidence 3333333 3345578999999999876433332211 12223333322 1368886 5666555544443332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+--..+..|.
T Consensus 104 ~~~Gadavlv~~P~y~~~s 122 (301)
T 1xky_A 104 TEVGVDAVMLVAPYYNKPS 122 (301)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 79999999987776663
No 350
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=84.40 E-value=7.8 Score=33.15 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhcCCccEEEEecCCCCC-CCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHH
Q 023442 26 KFVGEAMSVIAANTNVPVSVKCRIGVDD-HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 104 (282)
Q Consensus 26 ~~~~eiv~~v~~~~~ipvsvKiR~G~d~-~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i 104 (282)
+.+...++.+++. +.-|++=..+.-.+ .+...+.+..++++..+.|++.+.+.+.. -+.+
T Consensus 104 ~~l~~~~~~~~~~-g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~------------------~~e~ 164 (228)
T 3m47_A 104 DSVRACLNVAEEM-GREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR------------------PERL 164 (228)
T ss_dssp HHHHHHHHHHHHH-TCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSC------------------HHHH
T ss_pred HHHHHHHHHHHhc-CCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCC------------------hHHH
Confidence 4555566665442 33355422321111 01223445567778889999987765521 1223
Q ss_pred HHHHhcCCC-ceEEEccCCCCH-HHHHHHHHcCCCEEEecHHhhhCCc
Q 023442 105 YALLRDFPD-LTFTLNGGINTV-DEVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 105 ~~l~~~~~~-ipVi~nGdI~s~-eda~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.++.+..++ .++ ..+||..- .+. ++++.|+|.+.+||+++..+.
T Consensus 165 ~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~d 210 (228)
T 3m47_A 165 SRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADN 210 (228)
T ss_dssp HHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTSSC
T ss_pred HHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCC
Confidence 333333333 555 56666421 145 556689999999999887555
No 351
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=84.39 E-value=2.3 Score=37.60 Aligned_cols=67 Identities=7% Similarity=0.013 Sum_probs=44.9
Q ss_pred HHHHHhCCCCEEEEecCC----cccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEE
Q 023442 65 YKVSSLSPTRHFIIHSRK----ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 139 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt----~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgV 139 (282)
++.+.++|++.|.+-... ....|... ....+.+.++++. .++|++.++++.+.++++.+.+.|+|+|
T Consensus 34 a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~-------~~~~~~i~~i~~~-~~~Pvi~~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 34 AVIAEEAGAVAVMALERVPADIRAQGGVAR-------MSDPKIIKEIMAA-VSIPVMAKVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHTCSEEEECSSCHHHHHHTTCCCC-------CCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHCCCcEEEeccccchHHHhhcCCcc-------CCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHCCCCEE
Confidence 345678999998761110 11122110 1125667777664 5899999988888899998888999999
No 352
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=84.33 E-value=2.1 Score=38.06 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=45.3
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+..+.+.++.... .|+|+||
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavl 101 (291)
T 3a5f_A 29 EWHIKSKTDAIIVCGTTGEATTMTETE-------RKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLL 101 (291)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEE
Confidence 344578999999999776433332211 122233333321 358886 5666554444433332 7999999
Q ss_pred ecHHhhhCC
Q 023442 141 VGRAAYQNP 149 (282)
Q Consensus 141 IGRgal~nP 149 (282)
+--..+..|
T Consensus 102 v~~P~y~~~ 110 (291)
T 3a5f_A 102 VITPYYNKT 110 (291)
T ss_dssp EECCCSSCC
T ss_pred EcCCCCCCC
Confidence 997776665
No 353
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=84.18 E-value=2.8 Score=36.63 Aligned_cols=104 Identities=20% Similarity=0.212 Sum_probs=54.6
Q ss_pred HHHHHHHHhhcC---CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCC------
Q 023442 28 VGEAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP------ 98 (282)
Q Consensus 28 ~~eiv~~v~~~~---~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~------ 98 (282)
+.+.++.+++.- -+|+. =.|..+ .++..+ +++.++++|+|.|.+-.-. +.. -+|+..|..
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i---~~g~p~---~~~~~~-~~~~l~~~G~D~IElG~P~---sdP-~adgp~i~~a~~~al 72 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYL---MVGYPD---YETSLK-AFKEVLKNGTDILEIGFPF---SDP-VADGPTIQVAHEVAL 72 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEE---ETTSSC---HHHHHH-HHHHHHHTTCSEEEEECCC---SCC-TTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEe---cCCCCC---hHHHHH-HHHHHHHcCCCEEEECCCC---CCc-ccccHHHHHHHHHHH
Confidence 445555554331 23433 256544 233333 4567789999999994311 000 011111110
Q ss_pred ---c----cHHHHHHHHhcCCCceEEEccCCCC------HHHHHHHHHcCCCEEEec
Q 023442 99 ---L----KYEYYYALLRDFPDLTFTLNGGINT------VDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 99 ---~----~~~~i~~l~~~~~~ipVi~nGdI~s------~eda~~~l~~g~DgVmIG 142 (282)
+ -++.+.++.+..+++|++.-|.... ...++.+.+.|+|||.+.
T Consensus 73 ~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 73 KNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 0 1234566665544899998654321 244555556999999995
No 354
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=84.17 E-value=2.5 Score=37.52 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=46.2
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+..+.+.++.... .|+|+||
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavl 100 (289)
T 2yxg_A 28 NFLIENGVSGIVAVGTTGESPTLSHEE-------HKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVL 100 (289)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHCCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 344578999999999875433332211 122233333321 368986 5676555444443332 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 101 v~~P~y~~~s 110 (289)
T 2yxg_A 101 SITPYYNKPT 110 (289)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977776663
No 355
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=84.15 E-value=21 Score=31.77 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=43.0
Q ss_pred ccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 21 LMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
..-..+.+...++.|...+++||++.+-.|+.+ .+...+.+. .+.++|++++.+-+..
T Consensus 56 ~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~---~~~~~~~v~-~l~~aGa~gv~iED~~ 113 (290)
T 2hjp_A 56 NILSMSTHLEMMRAIASTVSIPLIADIDTGFGN---AVNVHYVVP-QYEAAGASAIVMEDKT 113 (290)
T ss_dssp TCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSS---HHHHHHHHH-HHHHHTCSEEEEECBC
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC---HHHHHHHHH-HHHHhCCeEEEEcCCC
Confidence 344567788888999999999999999999753 334455444 4557999999997643
No 356
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=84.04 E-value=2.8 Score=37.30 Aligned_cols=84 Identities=17% Similarity=0.075 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH---
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR--- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~--- 133 (282)
.+.+.+.+ +.+.+.|++.|.+.|-|+.....+... +.+.+...++...+ -|.+.|...+.+.++....
T Consensus 19 ~~~l~~lv-~~li~~Gv~gl~~~GttGE~~~Ls~eE-------r~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 19 KEKLKIHA-ENLIRKGIDKLFVNGTTGLGPSLSPEE-------KLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp HHHHHHHH-HHHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGG
T ss_pred HHHHHHHH-HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHh
Confidence 33333333 344579999999999876433332111 12233333433334 3567888665555544443
Q ss_pred cCCCEEEecHHhhhC-C
Q 023442 134 KGAHHVMVGRAAYQN-P 149 (282)
Q Consensus 134 ~g~DgVmIGRgal~n-P 149 (282)
.|+|+||+--..+.. |
T Consensus 90 ~Gadavlv~~P~y~~~~ 106 (293)
T 1w3i_A 90 FDIVGIASYAPYYYPRM 106 (293)
T ss_dssp SCCSEEEEECCCSCSSC
T ss_pred cCCCEEEEcCCCCCCCC
Confidence 799999999887766 5
No 357
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=83.95 E-value=7.2 Score=33.54 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=42.1
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhh
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 146 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal 146 (282)
+....+|++-+-.. .|.+. ..+|+.+..+.. +.|++..||+ |++.+.++++ .+..||=+..|.=
T Consensus 142 ~~~~~~d~~LlDs~----GGtG~-------~fDW~~~~~~~~---~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 142 ISRYNADMVLLDTG----AGSGK-------LHDLRVSSLVAR---KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp HHHSCCSEEEEEC------------------CCCHHHHHHHH---HSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGE
T ss_pred HhccCCCEEccCCC----CCCcC-------cCChHHHHHhhh---cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCCCCC
Confidence 34567898888642 23211 123776655544 4689999999 7888888887 7788887777764
No 358
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=83.94 E-value=3.6 Score=36.81 Aligned_cols=86 Identities=10% Similarity=-0.006 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|+.....+... +.+.+...++. ..++||| +.|+..+.+.++....
T Consensus 31 ~~~l~~l-v~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A 102 (303)
T 2wkj_A 31 KASLRRL-VQFNIQQGIDGLYVGGSTGEAFVQSLSE-------REQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASA 102 (303)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEECeeccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 3333333 3344578999999999876433332211 12223333332 2368986 5676655544443332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+--..+..|.
T Consensus 103 ~~~Gadavlv~~P~y~~~s 121 (303)
T 2wkj_A 103 KRYGFDAVSAVTPFYYPFS 121 (303)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhCCCCEEEecCCCCCCCC
Confidence 79999999977776663
No 359
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=83.78 E-value=4.3 Score=35.61 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=40.2
Q ss_pred ccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecC
Q 023442 21 LMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 81 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~R 81 (282)
..-..+.+...+++|...++.||++.+-.|+.+.. .+.+.+ +.++|+++|.+-+.
T Consensus 61 ~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~-----~~~~~~-l~~aGa~gv~iEd~ 115 (255)
T 2qiw_A 61 ENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP-----ADLIAQ-ILEAGAVGINVEDV 115 (255)
T ss_dssp TCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH-----HHHHHH-HHHTTCCEEEECSE
T ss_pred CCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH-----HHHHHH-HHHcCCcEEEECCC
Confidence 34456777788888888889999999999975422 333443 45699999998654
No 360
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=83.73 E-value=0.63 Score=41.09 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=33.4
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccch
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~ 153 (282)
+++|++.|.| +++++.+++. .++||+.||++.| +|.-|.
T Consensus 208 ~~rIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL-~~~~F~ 247 (254)
T 3m9y_A 208 ATRIQYGGSV-KPNNIKEYMAQTDIDGALVGGASL-KVEDFV 247 (254)
T ss_dssp TSEEEECSCC-CTTTHHHHHTSTTCCEEEESGGGS-SHHHHH
T ss_pred CccEEEcCCc-CHHHHHHHHcCCCCCeEEeeHHhh-CHHHHH
Confidence 6899999999 9999999997 8999999997776 454443
No 361
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=83.61 E-value=6.1 Score=37.27 Aligned_cols=99 Identities=10% Similarity=0.178 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHhhc---C--CccEEEEec--------------CCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc
Q 023442 23 LDPKFVGEAMSVIAAN---T--NVPVSVKCR--------------IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA 83 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~---~--~ipvsvKiR--------------~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~ 83 (282)
.+.+.+.-++++|+++ + ++.+.+..- -+| +..+.++++.+++++.++.+|.
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~----t~~eai~~~~~ll~~y~i~~IE------ 285 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQL----TSEEMIDRLTEWTKKYPVISIE------ 285 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCB----CHHHHHHHHHHHHHHSCEEEEE------
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceecccccc----CHHHHHHHHHHHHhhcccceEe------
Confidence 3455566678999988 5 456666551 123 3345566655557888866552
Q ss_pred ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccC---CCCHHHHHHHHH-cCCCEEEec
Q 023442 84 LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 84 ~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGd---I~s~eda~~~l~-~g~DgVmIG 142 (282)
+.. ++-+|+...++.+.. +.||-..|| ++|++++.++++ ..||.|.+=
T Consensus 286 --dPl--------~~dD~eg~~~L~~~~-~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 286 --DGL--------SENDWAGWKLLTERL-ENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp --CCS--------CTTCHHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred --CCC--------CcccHHHHHHHHHhc-CCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 222 122367666666542 433422355 459999999998 668888653
No 362
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=83.52 E-value=3.9 Score=36.48 Aligned_cols=85 Identities=19% Similarity=0.137 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|......+..+ +.+.+...++. ..++||| +.|... .+++.++.+
T Consensus 27 ~~~l~~l-v~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~-t~~ai~la~~ 97 (297)
T 3flu_A 27 YEQLRDL-IDWHIENGTDGIVAVGTTGESATLSVEE-------HTAVIEAVVKHVAKRVPVIAGTGANN-TVEAIALSQA 97 (297)
T ss_dssp HHHHHHH-HHHHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSS-HHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEeCccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCcC-HHHHHHHHHH
Confidence 3343333 3345579999999999875433332111 12223333332 1368887 455554 444444332
Q ss_pred ---cCCCEEEecHHhhhCCc
Q 023442 134 ---KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 98 a~~~Gadavlv~~P~y~~~~ 117 (297)
T 3flu_A 98 AEKAGADYTLSVVPYYNKPS 117 (297)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHHcCCCEEEECCCCCCCCC
Confidence 79999999977776664
No 363
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.28 E-value=3.8 Score=36.77 Aligned_cols=82 Identities=13% Similarity=0.008 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEE-ccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTL-NGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~-nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ..++|||+ .|+..+.+.++....
T Consensus 28 ~~~l~~lv-~~li~~Gv~gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A 99 (309)
T 3fkr_A 28 LASQKRAV-DFMIDAGSDGLCILANFSEQFAITDDE-------RDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRA 99 (309)
T ss_dssp HHHHHHHH-HHHHHTTCSCEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEECccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHH
Confidence 33333333 345579999999999775433332111 12223333332 23689885 566655544443332
Q ss_pred --cCCCEEEecHHhh
Q 023442 134 --KGAHHVMVGRAAY 146 (282)
Q Consensus 134 --~g~DgVmIGRgal 146 (282)
.|+|+||+--..+
T Consensus 100 ~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHTTCSEEEECCSCB
T ss_pred HHcCCCEEEEcCCCC
Confidence 7999999987655
No 364
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=83.26 E-value=9.7 Score=33.98 Aligned_cols=104 Identities=10% Similarity=0.066 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 22 MLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
+-..+...+-|++++++- +.++.|--|.-- ....+++.++. ++.++++|+|.|.+++-+.
T Consensus 132 l~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~R-a~ay~eAGAd~i~~e~~~~----------------- 192 (287)
T 3b8i_A 132 LICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQR-TLAYQEAGADGICLVGVRD----------------- 192 (287)
T ss_dssp BCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHHH-HHHHHHTTCSEEEEECCCS-----------------
T ss_pred ccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHHH-HHHHHHcCCCEEEecCCCC-----------------
Confidence 555666666677776653 333444444311 11234555554 4577899999999998321
Q ss_pred HHHHHHHHhcCCCceEEE-ccCCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 101 YEYYYALLRDFPDLTFTL-NGGINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~-nGdI~s~eda~~~l~~g~DgVmIGRga 145 (282)
.+.+.++.+. .++|++. .|+-...-+..++-+.|+.-|..|-.+
T Consensus 193 ~~~~~~i~~~-~~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~ 237 (287)
T 3b8i_A 193 FAHLEAIAEH-LHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAA 237 (287)
T ss_dssp HHHHHHHHTT-CCSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHH
T ss_pred HHHHHHHHHh-CCCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHH
Confidence 3455667665 4688873 233222223345555788888887443
No 365
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=83.25 E-value=13 Score=33.14 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=62.4
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 57 GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 124 (301)
T 1xky_A 57 GESPTLTSEEKVALYRHVVSVVDKRVPVIAGT--GSN---NTHASID-LTKKATEVGVDAVMLVAPY--YNKPSQE---- 124 (301)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---CHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCceEEeCC--CCC---CHHHHHH-HHHHHHhcCCCEEEEcCCC--CCCCCHH----
Confidence 4333335555567777776655 58988765 322 2344454 3566789999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 125 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 171 (301)
T 1xky_A 125 ---GMYQHFKAIAES-TPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAI 171 (301)
T ss_dssp ---HHHHHHHHHHHT-CSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEE
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEE
Confidence 115566677664 578875 45 54468888888876 444444
No 366
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=83.24 E-value=2.3 Score=37.89 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=46.1
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+..+.+.++.... .|+|+||
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavl 101 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDE-------HADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCL 101 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEE
T ss_pred HHHHHcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEE
Confidence 344568999999999876433332211 122233333321 358886 5666555544444433 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 102 v~~P~y~~~s 111 (292)
T 2ojp_A 102 TVTPYYNRPS 111 (292)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977776663
No 367
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=83.22 E-value=1.1 Score=39.43 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=33.0
Q ss_pred CCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccch
Q 023442 112 PDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 112 ~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~ 153 (282)
.+++|++.|.|+. +++.+++. .++||+.||++.| +|.-|.
T Consensus 203 ~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL-~a~~F~ 243 (252)
T 2btm_A 203 EAIRIQYGGSVKP-DNIRDFLAQQQIDGALVGGASL-EPASFL 243 (252)
T ss_dssp TTSEEEEESSCCT-TTHHHHHTSTTCCEEEESGGGS-SHHHHH
T ss_pred CceeEEEcCCCCH-HHHHHHHcCCCCCeeEecHHHh-ChHHHH
Confidence 3699999999966 99999997 9999999997776 444343
No 368
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=83.22 E-value=1.1 Score=39.38 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=32.6
Q ss_pred CCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccc
Q 023442 112 PDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 112 ~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if 152 (282)
.+++|++.|.|.. +++.+++. .++||+.||++.|. |.-|
T Consensus 203 ~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~-a~~F 242 (250)
T 1yya_A 203 SRVRILYGGSVNP-KNFADLLSMPNVDGGLVGGASLE-LESF 242 (250)
T ss_dssp TTCEEEEESSCCT-TTHHHHHTSTTCCEEEESGGGSS-HHHH
T ss_pred CceeEEEcCCCCH-HHHHHHHcCCCCCeeEeeHHHhC-hHHH
Confidence 3689999999976 99999998 79999999987764 4434
No 369
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=83.11 E-value=4.1 Score=36.52 Aligned_cols=84 Identities=14% Similarity=0.121 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEE-ccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTL-NGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~-nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ..++|||+ .|+. |.+++.++.+
T Consensus 35 ~~~l~~lv-~~li~~Gv~gi~v~GttGE~~~Lt~~E-------r~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~ 105 (304)
T 3l21_A 35 TATAARLA-NHLVDQGCDGLVVSGTTGESPTTTDGE-------KIELLRAVLEAVGDRARVIAGAGTY-DTAHSIRLAKA 105 (304)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCS-CHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEeCCCC-CHHHHHHHHHH
Confidence 33433333 344578999999999875433332111 12223333332 23689875 5555 4455554443
Q ss_pred ---cCCCEEEecHHhhhCC
Q 023442 134 ---KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP 149 (282)
.|+|+||+.-..+..|
T Consensus 106 a~~~Gadavlv~~P~y~~~ 124 (304)
T 3l21_A 106 CAAEGAHGLLVVTPYYSKP 124 (304)
T ss_dssp HHHHTCSEEEEECCCSSCC
T ss_pred HHHcCCCEEEECCCCCCCC
Confidence 7999999997766665
No 370
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.01 E-value=16 Score=32.20 Aligned_cols=107 Identities=8% Similarity=-0.070 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 26 KFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR-HFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 26 ~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~-~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
+.+.+.++..++.. +.|+.+=+. |. ..++..+ .++.++++|+| .|.+|.-.....|. .++-.-+...++
T Consensus 77 ~~~~~~~~~~~~~~~~~~p~~~~i~-g~----~~~~~~~-~a~~~~~~g~d~~iein~~~P~~~g~--~~~g~~~e~~~~ 148 (311)
T 1jub_A 77 DYYLDYVLKNQKENAQEGPIFFSIA-GM----SAAENIA-MLKKIQESDFSGITELNLSCPNVPGE--PQLAYDFEATEK 148 (311)
T ss_dssp HHHHHHHHHHHHHTCSSSCCEEEEC-CS----SHHHHHH-HHHHHHHSCCCSEEEEESCCCCSSSC--CCGGGCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcC-CC----CHHHHHH-HHHHHHhcCCCeEEEEeccCCCCCCc--ccccCCHHHHHH
Confidence 33333344444334 678777664 22 2344444 45667889999 99998532111221 111000001133
Q ss_pred HHHHHHhcCCCceEEE--ccCCCCHHHHHH---HHH-cCCCEEEec
Q 023442 103 YYYALLRDFPDLTFTL--NGGINTVDEVNA---ALR-KGAHHVMVG 142 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~--nGdI~s~eda~~---~l~-~g~DgVmIG 142 (282)
.+.++++ ..++||+. +.++ +.+++.+ .++ .|+|+|.+-
T Consensus 149 iv~~vr~-~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 149 LLKEVFT-FFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp HHHHHTT-TCCSCEEEEECCCC-SHHHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHH-hcCCCEEEEECCCC-CHHHHHHHHHHHHHcCCcEEEec
Confidence 3444433 34788874 5665 6555533 333 799998763
No 371
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=82.86 E-value=23 Score=32.69 Aligned_cols=79 Identities=8% Similarity=0.009 Sum_probs=58.9
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCC-CCHHHHHHHHH
Q 023442 55 DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI-NTVDEVNAALR 133 (282)
Q Consensus 55 ~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI-~s~eda~~~l~ 133 (282)
.+.+.+++.+. .++++|++.+.+.--+.. .-+.+..+++. .++|++ +|| +++.-+..+++
T Consensus 43 ~D~~atv~Qi~-~l~~aG~diVRvavp~~~---------------~a~al~~I~~~-~~vPlv--aDiHf~~~lal~a~e 103 (366)
T 3noy_A 43 HDVEATLNQIK-RLYEAGCEIVRVAVPHKE---------------DVEALEEIVKK-SPMPVI--ADIHFAPSYAFLSME 103 (366)
T ss_dssp TCHHHHHHHHH-HHHHTTCCEEEEECCSHH---------------HHHHHHHHHHH-CSSCEE--EECCSCHHHHHHHHH
T ss_pred cCHHHHHHHHH-HHHHcCCCEEEeCCCChH---------------HHHHHHHHHhc-CCCCEE--EeCCCCHHHHHHHHH
Confidence 44666676665 457899999988753210 12445566554 478886 588 89999999999
Q ss_pred cCCCEEEecHHhhhCCccc
Q 023442 134 KGAHHVMVGRAAYQNPWYT 152 (282)
Q Consensus 134 ~g~DgVmIGRgal~nP~if 152 (282)
.|+|.+=|==|-+++++-|
T Consensus 104 ~G~dklRINPGNig~~~~~ 122 (366)
T 3noy_A 104 KGVHGIRINPGNIGKEEIV 122 (366)
T ss_dssp TTCSEEEECHHHHSCHHHH
T ss_pred hCCCeEEECCcccCchhHH
Confidence 9999999999999888765
No 372
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=82.80 E-value=2.9 Score=37.14 Aligned_cols=76 Identities=16% Similarity=0.013 Sum_probs=45.2
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH---cCCCEEEec
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR---KGAHHVMVG 142 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~---~g~DgVmIG 142 (282)
+.+.+.|++.|.+.|-|+.....+... +.+.+...++...+ -|.+.|+..+.+.++.... .|+|+||+-
T Consensus 27 ~~li~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 27 KNLLEKGIDAIFVNGTTGLGPALSKDE-------KRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHH-------HHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 344578999999999876433332111 12223333332234 3457787655555444432 799999999
Q ss_pred HHhhhC-C
Q 023442 143 RAAYQN-P 149 (282)
Q Consensus 143 Rgal~n-P 149 (282)
-..+.. |
T Consensus 99 ~P~y~~~~ 106 (288)
T 2nuw_A 99 SPYYFPRL 106 (288)
T ss_dssp CCCSSCSC
T ss_pred CCcCCCCC
Confidence 877766 5
No 373
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=82.78 E-value=2.3 Score=38.75 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|...+.+-++....
T Consensus 54 ~~~l~~lv-~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 125 (332)
T 2r8w_A 54 IEAFSALI-ARLDAAEVDSVGILGSTGIYMYLTREE-------RRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDA 125 (332)
T ss_dssp HHHHHHHH-HHHHHHTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 33333333 344578999999999876433332211 122233333322 368986 6676555444433332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 126 ~~~Gadavlv~~P~Y~~~s 144 (332)
T 2r8w_A 126 EAAGADALLLAPVSYTPLT 144 (332)
T ss_dssp HHHTCSEEEECCCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 79999999977776653
No 374
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=82.74 E-value=7 Score=35.51 Aligned_cols=82 Identities=20% Similarity=0.215 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHhCCCCEEEE-ecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEcc--CCCCHHHHHHHHH
Q 023442 57 YNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINTVDEVNAALR 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~V-H~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nG--dI~s~eda~~~l~ 133 (282)
.++..+ +++.|.++|++.|.+ |+. .+ .|.++ ++.....-.|+.++++.+..+++|+.+=| +..+.++++++.+
T Consensus 29 ~e~k~~-i~~~L~~~Gvd~IEvG~~~-g~-p~ssp-~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 29 LDDVRA-IARALDKAKVDSIEVAHGD-GL-QGSSF-NYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp HHHHHH-HHHHHHHHTCSEEECSCTT-ST-TCCBT-TTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHcCCCEEEEecCC-CC-CCCCC-cccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 445444 456778899999999 543 11 11111 11101122488888887765677776442 3457899999999
Q ss_pred cCCCEEEec
Q 023442 134 KGAHHVMVG 142 (282)
Q Consensus 134 ~g~DgVmIG 142 (282)
.|+|+|-|.
T Consensus 105 aGvd~v~I~ 113 (345)
T 1nvm_A 105 AGARVVRVA 113 (345)
T ss_dssp HTCCEEEEE
T ss_pred CCcCEEEEE
Confidence 999999885
No 375
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=82.49 E-value=2.1 Score=38.21 Aligned_cols=78 Identities=14% Similarity=0.091 Sum_probs=46.1
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|...+.+-++.... .|+|+||
T Consensus 28 ~~li~~Gv~gi~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavl 100 (297)
T 2rfg_A 28 DWQIKHGAHGLVPVGTTGESPTLTEEE-------HKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVL 100 (297)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 344578999999998775433332211 122233333221 358876 5666555444443332 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 101 v~~P~y~~~s 110 (297)
T 2rfg_A 101 CVAGYYNRPS 110 (297)
T ss_dssp ECCCTTTCCC
T ss_pred EcCCCCCCCC
Confidence 9988776663
No 376
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=82.36 E-value=3.5 Score=36.66 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=45.6
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHH----cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALR----KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~----~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|......+..+ +.+.+...++. ..++|||+.=+=.|.+++.++.+ .|+|+||
T Consensus 30 ~~li~~Gv~gl~v~GttGE~~~Lt~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavl 102 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAESPTLTTDE-------KELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIM 102 (292)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEE
Confidence 344579999999998775433222111 12223333332 23688875433345555555443 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+.-..+..|.
T Consensus 103 v~~P~y~~~~ 112 (292)
T 3daq_A 103 LITPYYNKTN 112 (292)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977766663
No 377
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=82.20 E-value=12 Score=34.40 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=65.9
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||.-|+|.+++.++-+ .+.||.+|. |.. +++|+... +..+.+.|.+.+.+|+-+ .| ..+.
T Consensus 130 I~S~~~~n~~LL~~va~-----~gkPviLst--Gma---t~~Ei~~A-ve~i~~~G~~iiLlhc~s-~Y--p~~~----- 190 (349)
T 2wqp_A 130 IGSGECNNYPLIKLVAS-----FGKPIILST--GMN---SIESIKKS-VEIIREAGVPYALLHCTN-IY--PTPY----- 190 (349)
T ss_dssp ECGGGTTCHHHHHHHHT-----TCSCEEEEC--TTC---CHHHHHHH-HHHHHHHTCCEEEEECCC-CS--SCCG-----
T ss_pred ECcccccCHHHHHHHHh-----cCCeEEEEC--CCC---CHHHHHHH-HHHHHHcCCCEEEEeccC-CC--CCCh-----
Confidence 36778999988665543 489999986 442 35555443 345567788888889632 22 1111
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHH
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRg 144 (282)
..+++..+..+++.++++||..++==....-+..+...||| ||=+-
T Consensus 191 ~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlGA~--iIEkH 236 (349)
T 2wqp_A 191 EDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGS--ILERH 236 (349)
T ss_dssp GGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHTCC--EEEEE
T ss_pred hhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhCCC--EEEeC
Confidence 13456777777776658999765433344555555567888 44433
No 378
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=82.11 E-value=11 Score=33.70 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHHhhcC-CccEEEEecCCCC-CCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCc
Q 023442 22 MLDPKFVGEAMSVIAANT-NVPVSVKCRIGVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPL 99 (282)
Q Consensus 22 l~~p~~~~eiv~~v~~~~-~ipvsvKiR~G~d-~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~ 99 (282)
+...+...+-|++++++. ..++.|--|.--. ....+++.++. ++.++++|+|.|.++++...
T Consensus 128 l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R-a~ay~eAGAd~i~~e~~~~~--------------- 191 (290)
T 2hjp_A 128 LVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRR-GQAYEEAGADAILIHSRQKT--------------- 191 (290)
T ss_dssp BCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHH-HHHHHHTTCSEEEECCCCSS---------------
T ss_pred ccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHH-HHHHHHcCCcEEEeCCCCCC---------------
Confidence 444444444556555542 2334444443111 11224566654 45678999999999995311
Q ss_pred cHHHHHHHHhcCC-CceEEEc---cCCCCHHHHHHHHHcC-CCEEEecHHhh
Q 023442 100 KYEYYYALLRDFP-DLTFTLN---GGINTVDEVNAALRKG-AHHVMVGRAAY 146 (282)
Q Consensus 100 ~~~~i~~l~~~~~-~ipVi~n---GdI~s~eda~~~l~~g-~DgVmIGRgal 146 (282)
-+.+.++.+... .+|+++| +...| ..++-+.| +..|.+|-.++
T Consensus 192 -~~~~~~i~~~~~~~vP~i~n~~~~~~~~---~~eL~~lG~v~~v~~~~~~~ 239 (290)
T 2hjp_A 192 -PDEILAFVKSWPGKVPLVLVPTAYPQLT---EADIAALSKVGIVIYGNHAI 239 (290)
T ss_dssp -SHHHHHHHHHCCCSSCEEECGGGCTTSC---HHHHHTCTTEEEEEECSHHH
T ss_pred -HHHHHHHHHHcCCCCCEEEeccCCCCCC---HHHHHhcCCeeEEEechHHH
Confidence 234556666542 2999987 33344 34555578 99999885544
No 379
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=82.11 E-value=9.3 Score=33.71 Aligned_cols=109 Identities=14% Similarity=0.162 Sum_probs=59.2
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 96 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i 96 (282)
.||..+++.+++.+ +. .++.||.+|.-..- ..+ ++... +..+...|...+++.-|...+ +. +.
T Consensus 100 IgA~~~rn~~ll~~----~a-~~~~PV~lK~G~~~-t~~---e~~~A-v~~i~~~GN~~i~L~~rG~~~-~y---~~--- 162 (267)
T 2nwr_A 100 IPAFLCRQTDLLLA----AA-KTGRAVNVKKGQFL-APW---DTKNV-VEKLKFGGAKEIYLTERGTTF-GY---NN--- 162 (267)
T ss_dssp ECGGGTTCHHHHHH----HH-TTTSEEEEECCTTC-CGG---GGHHH-HHHHHHTTCSSEEEEECCEEC-SS---SC---
T ss_pred ECcccccCHHHHHH----HH-cCCCcEEEeCCCCC-CHH---HHHHH-HHHHHHcCCCeEEEEECCCCC-CC---Cc---
Confidence 68889999985444 42 46899999965421 112 22222 334567898666665554333 21 10
Q ss_pred CCccHHHHHHHHhcCCCceEEEc---------------cCCCC--HHHHHHHHHcCCCEEEecHHh
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~n---------------GdI~s--~eda~~~l~~g~DgVmIGRga 145 (282)
.-++...+..+.+ . + ||+.. ++-.. ..-+......|+||+||=+-.
T Consensus 163 ~~~dl~~i~~lk~-~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~ 225 (267)
T 2nwr_A 163 LVVDFRSLPIMKQ-W-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHP 225 (267)
T ss_dssp EECCTTHHHHHTT-T-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred cccCHHHHHHHHH-c-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecC
Confidence 0123444545543 3 5 88762 22111 222334445899999997643
No 380
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=82.04 E-value=10 Score=33.70 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=59.3
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.+++.|+|++-+-.-. |...+..
T Consensus 45 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 112 (297)
T 2rfg_A 45 GESPTLTEEEHKRVVALVAEQAQGRVPVIAGA--GSN---NPVEAVR-YAQHAQQAGADAVLCVAGY--YNRPSQE---- 112 (297)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SHHHHHH-HHHHHHHHTCSEEEECCCT--TTCCCHH----
T ss_pred cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc--CCC---CHHHHHH-HHHHHHhcCCCEEEEcCCC--CCCCCHH----
Confidence 4333335555567777776654 58888765 322 2344444 3566788999999887531 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 113 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 113 ---GLYQHFKMVHDA-IDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 114556677665 478875 45 55568888888876
No 381
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=81.98 E-value=4.7 Score=37.23 Aligned_cols=85 Identities=12% Similarity=0.041 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEE-ccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTL-NGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~-nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ...+|||+ .|+..+.+.++....
T Consensus 79 ~~al~~l-v~~li~~Gv~Gl~v~GTTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 150 (360)
T 4dpp_A 79 LEAYDDL-VNIQIQNGAEGVIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQG 150 (360)
T ss_dssp HHHHHHH-HHHHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEecccccChhhCCHHH-------HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 4343333 3345579999999999775433222111 12223333332 23689875 666544444433332
Q ss_pred --cCCCEEEecHHhhhCC
Q 023442 134 --KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP 149 (282)
.|||+||+--..+..|
T Consensus 151 ~~~Gadavlvv~PyY~k~ 168 (360)
T 4dpp_A 151 FAVGMHAALHINPYYGKT 168 (360)
T ss_dssp HHTTCSEEEEECCCSSCC
T ss_pred HHcCCCEEEEcCCCCCCC
Confidence 7999999986555444
No 382
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=81.80 E-value=3.3 Score=37.30 Aligned_cols=85 Identities=12% Similarity=0.145 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ..++||| +.|... .+++.++.+
T Consensus 43 ~~~l~~lv-~~li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~s-t~eai~la~~ 113 (314)
T 3qze_A 43 WDSLAKLV-DFHLQEGTNAIVAVGTTGESATLDVEE-------HIQVIRRVVDQVKGRIPVIAGTGANS-TREAVALTEA 113 (314)
T ss_dssp HHHHHHHH-HHHHHHTCCEEEESSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSS-HHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCcC-HHHHHHHHHH
Confidence 43443333 344578999999999775433332111 12223223332 1368887 455554 444444432
Q ss_pred ---cCCCEEEecHHhhhCCc
Q 023442 134 ---KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 114 A~~~Gadavlv~~P~y~~~s 133 (314)
T 3qze_A 114 AKSGGADACLLVTPYYNKPT 133 (314)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHHcCCCEEEEcCCCCCCCC
Confidence 79999999977776663
No 383
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=81.74 E-value=6.2 Score=36.77 Aligned_cols=43 Identities=7% Similarity=0.018 Sum_probs=33.7
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEE
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVM 140 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVm 140 (282)
++-+++..+++.+. .++||.+.=.+.|.+|+.++++ ..+|.|.
T Consensus 268 ~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~div~ 311 (412)
T 4h1z_A 268 RTEDIDGLARVAAS-VSTAIAVGEEWRTVHDMVPRVARRALAIVQ 311 (412)
T ss_dssp CTTCHHHHHHHHHH-CSSEEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CccchHHHHHHHhh-cCCccccCCcccchHhHHHHHHcCCCCEEE
Confidence 34457777777765 5899999889999999999998 5577654
No 384
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=81.54 E-value=5.3 Score=36.02 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=56.4
Q ss_pred ccCCHHHHHHHHHHHhhc---CCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCC
Q 023442 21 LMLDPKFVGEAMSVIAAN---TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIP 97 (282)
Q Consensus 21 Ll~~p~~~~eiv~~v~~~---~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~ 97 (282)
|....+.+.+| ++.+++ .+.++.|=-|.---....+++.++. ++...++|+|.|.+|+-+.
T Consensus 131 l~~~~e~~~rI-~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~R-a~ay~eAGAD~ifi~g~~~-------------- 194 (302)
T 3fa4_A 131 LVDTDTYVTRI-RAAVQARQRIGSDIVVIARTDSLQTHGYEESVAR-LRAARDAGADVGFLEGITS-------------- 194 (302)
T ss_dssp BCCHHHHHHHH-HHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHH-HHHHHTTTCSEEEETTCCC--------------
T ss_pred ecCHHHHHHHH-HHHHHHHHhcCCCEEEEEEecccccCCHHHHHHH-HHHHHHcCCCEEeecCCCC--------------
Confidence 33333444444 444433 2445555556411001124555554 3456789999999998421
Q ss_pred CccHHHHHHHHhcCCCceEEEc---cC---CCCHHHHHHHHHcCCCEEEecHHh
Q 023442 98 PLKYEYYYALLRDFPDLTFTLN---GG---INTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 98 ~~~~~~i~~l~~~~~~ipVi~n---Gd---I~s~eda~~~l~~g~DgVmIGRga 145 (282)
.+.+.++++.....|+..| |+ ..|.+ ++-+.|+.-|..+-.+
T Consensus 195 ---~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~---eL~~lGv~~v~~~~~~ 242 (302)
T 3fa4_A 195 ---REMARQVIQDLAGWPLLLNMVEHGATPSISAA---EAKEMGFRIIIFPFAA 242 (302)
T ss_dssp ---HHHHHHHHHHTTTSCEEEECCTTSSSCCCCHH---HHHHHTCSEEEETTTT
T ss_pred ---HHHHHHHHHHhcCCceeEEEecCCCCCCCCHH---HHHHcCCCEEEEchHH
Confidence 3556677776545788765 22 23444 4444688888887444
No 385
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=81.51 E-value=4 Score=36.61 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=46.1
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++. ..++||| +.|+..+.+.++.... .|+|+||
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavl 112 (306)
T 1o5k_A 40 RYQLENGVNALIVLGTTGESPTVNEDE-------REKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVL 112 (306)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEE
Confidence 344578999999999876433332211 12223333322 1368886 5666555444443332 7999999
Q ss_pred ecHHhhhCCc
Q 023442 141 VGRAAYQNPW 150 (282)
Q Consensus 141 IGRgal~nP~ 150 (282)
+--..+..|.
T Consensus 113 v~~P~y~~~s 122 (306)
T 1o5k_A 113 VVTPYYNKPT 122 (306)
T ss_dssp EECCCSSCCC
T ss_pred ECCCCCCCCC
Confidence 9977776663
No 386
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=81.49 E-value=13 Score=33.72 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=58.0
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 76 GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv--g~~---st~eai~-la~~A~~~Gadavlv~~P~--Y~~~s~~---- 143 (343)
T 2v9d_A 76 GEFSQLGAEERKAIARFAIDHVDRRVPVLIGT--GGT---NARETIE-LSQHAQQAGADGIVVINPY--YWKVSEA---- 143 (343)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CSS---CHHHHHH-HHHHHHHHTCSEEEEECCS--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 3333335555567777776655 58888765 222 2344444 3566789999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAAL 132 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l 132 (282)
--++++.++++. .++||+ +| |--.+++.+.++.
T Consensus 144 ---~l~~~f~~VA~a-~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 144 ---NLIRYFEQVADS-VTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp ---HHHHHHHHHHHT-CSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 014556666664 478875 45 5445888888877
No 387
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=81.41 E-value=3.8 Score=36.94 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCH----------HHH
Q 023442 59 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV----------DEV 128 (282)
Q Consensus 59 e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~----------eda 128 (282)
+.+..+++...++|++.+..++.. . ..+.+..++-.++..+||.-- ..+
T Consensus 158 e~V~~lA~~a~~~G~dGvV~s~~E------------------~---~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~ 216 (303)
T 3ru6_A 158 EAVINFSKISYENGLDGMVCSVFE------------------S---KKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANL 216 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEECCTTT------------------H---HHHHHHSCTTSEEEECCCCTTC--------CCSH
T ss_pred HHHHHHHHHHHHcCCCEEEECHHH------------------H---HHHHHhCCCccEEECCCcCcccCCcccccccCCH
Confidence 333345667778999998774421 1 123333333346677777621 034
Q ss_pred HHHHHcCCCEEEecHHhhhCCcc
Q 023442 129 NAALRKGAHHVMVGRAAYQNPWY 151 (282)
Q Consensus 129 ~~~l~~g~DgVmIGRgal~nP~i 151 (282)
.++++.|+|.+.+||++...+..
T Consensus 217 ~~a~~aGAd~iVvGr~I~~a~dp 239 (303)
T 3ru6_A 217 AMARENLSDYIVVGRPIYKNENP 239 (303)
T ss_dssp HHHHHTTCSEEEECHHHHTSSCH
T ss_pred HHHHHcCCCEEEEChHHhCCCCH
Confidence 45567899999999999987653
No 388
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=81.34 E-value=8.2 Score=35.47 Aligned_cols=44 Identities=14% Similarity=0.192 Sum_probs=34.6
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
++-+|+...++.+. ..+||.+.=.+.|.+|+.++++ ..+|.|.+
T Consensus 237 ~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 281 (386)
T 1wue_A 237 AADDFLDHAQLQRE-LKTRICLDENIRSLKDCQVALALGSCRSINL 281 (386)
T ss_dssp CTTCSHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CcccHHHHHHHHHh-cCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 34456767777664 5799999888999999999998 66898766
No 389
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=81.28 E-value=9.7 Score=28.84 Aligned_cols=62 Identities=6% Similarity=0.032 Sum_probs=45.2
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
.+.+...|.|.+........ .++.+..+.+..+++|||.-.+-.+.+.+.++++.|+++++.
T Consensus 61 ~l~~~~~dlii~D~~l~~~~-------------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 122 (150)
T 4e7p_A 61 LLEKESVDIAILDVEMPVKT-------------GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVL 122 (150)
T ss_dssp HHTTSCCSEEEECSSCSSSC-------------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HhhccCCCEEEEeCCCCCCc-------------HHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEe
Confidence 34566788888775432111 166777777767789999888888999999999999987754
No 390
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=81.04 E-value=13 Score=33.22 Aligned_cols=106 Identities=10% Similarity=0.010 Sum_probs=63.0
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+|++-+..-. |...+.
T Consensus 60 GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~s~----- 126 (304)
T 3l21_A 60 GESPTTTDGEKIELLRAVLEAVGDRARVIAGA--GTY---DTAHSIR-LAKACAAEGAHGLLVVTPY--YSKPPQ----- 126 (304)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---CHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCH-----
T ss_pred cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC--CCC---CHHHHHH-HHHHHHHcCCCEEEECCCC--CCCCCH-----
Confidence 3333334555567777776655 57998864 322 2345554 3566789999999987532 111111
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
..-++++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 127 --~~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 174 (304)
T 3l21_A 127 --RGLQAHFTAVADA-TELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGV 174 (304)
T ss_dssp --HHHHHHHHHHHTS-CSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEE
T ss_pred --HHHHHHHHHHHHh-cCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 0114556677664 588985 55 66678888888876 444444
No 391
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=81.02 E-value=5.4 Score=35.94 Aligned_cols=76 Identities=20% Similarity=0.141 Sum_probs=43.7
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH---cCCCEE
Q 023442 65 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR---KGAHHV 139 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~---~g~DgV 139 (282)
.+.+.+.|++.|.+-|-|......+..+ +.+.+...++. ...+||| +.|+..+.+.++.... .|+|+|
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadav 110 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAFLLTREE-------RAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYV 110 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3345678999999999775433232111 12223333332 2368887 5666544444443332 799999
Q ss_pred EecHHhhh
Q 023442 140 MVGRAAYQ 147 (282)
Q Consensus 140 mIGRgal~ 147 (282)
|+--..+.
T Consensus 111 lv~~P~y~ 118 (318)
T 3qfe_A 111 LVLPPAYF 118 (318)
T ss_dssp EECCCCC-
T ss_pred EEeCCccc
Confidence 99987554
No 392
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=81.00 E-value=3.9 Score=36.34 Aligned_cols=85 Identities=13% Similarity=0.155 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEE-ccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTL-NGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~-nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ...+|||+ .|.. |.+++.++.+
T Consensus 21 ~~~l~~lv-~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~-~t~~ai~la~~ 91 (291)
T 3tak_A 21 WKSLEKLV-EWHIEQGTNSIVAVGTTGEASTLSMEE-------HTQVIKEIIRVANKRIPIIAGTGAN-STREAIELTKA 91 (291)
T ss_dssp HHHHHHHH-HHHHHHTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCS-SHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHCCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCeEEEeCCCC-CHHHHHHHHHH
Confidence 33333333 344578999999999775433322111 12223223332 13688874 5554 4455544432
Q ss_pred ---cCCCEEEecHHhhhCCc
Q 023442 134 ---KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 92 a~~~Gadavlv~~P~y~~~~ 111 (291)
T 3tak_A 92 AKDLGADAALLVTPYYNKPT 111 (291)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEEcCCCCCCCC
Confidence 79999999977776664
No 393
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=80.99 E-value=14 Score=32.52 Aligned_cols=99 Identities=10% Similarity=0.011 Sum_probs=58.4
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 45 GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~s~~---- 112 (289)
T 2yxg_A 45 GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA--GSN---CTEEAIE-LSVFAEDVGADAVLSITPY--YNKPTQE---- 112 (289)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCS---SHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 4333335555567777776654 58888765 322 2344444 3566788999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAAL 132 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l 132 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.
T Consensus 113 ---~l~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 113 ---GLRKHFGKVAES-INLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 114556667665 478875 45 5446888888887
No 394
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=80.91 E-value=8.2 Score=32.66 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=24.4
Q ss_pred ceEEEccCCCCH---HH------HHHHHHcCCCEEEecHHhhhCCc
Q 023442 114 LTFTLNGGINTV---DE------VNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 114 ipVi~nGdI~s~---ed------a~~~l~~g~DgVmIGRgal~nP~ 150 (282)
.+ +..|||.-- .| ..+ ++.|+|++.+||+++..+.
T Consensus 157 ~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~d 200 (213)
T 1vqt_A 157 GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSEN 200 (213)
T ss_dssp SC-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSC
T ss_pred CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCC
Confidence 35 666777432 12 466 7789999999999987766
No 395
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=80.90 E-value=4.2 Score=37.18 Aligned_cols=86 Identities=10% Similarity=0.062 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|+.....+... +.+.+...++. ..++||| +.|+..+.+-++....
T Consensus 51 ~~~l~~lv-~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 122 (343)
T 2v9d_A 51 KPGTAALI-DDLIKAGVDGLFFLGSGGEFSQLGAEE-------RKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHA 122 (343)
T ss_dssp HHHHHHHH-HHHHHTTCSCEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEeCccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 43443433 344578999999999876433332111 12223333322 1368886 5666554444433332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+--..+..|.
T Consensus 123 ~~~Gadavlv~~P~Y~~~s 141 (343)
T 2v9d_A 123 QQAGADGIVVINPYYWKVS 141 (343)
T ss_dssp HHHTCSEEEEECCSSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 79999999977776663
No 396
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=80.76 E-value=4.1 Score=36.77 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ..++||| +.|... .+++.++.+
T Consensus 42 ~~~l~~l-i~~li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~s-t~~ai~la~~ 112 (315)
T 3si9_A 42 EKAFCNF-VEWQITQGINGVSPVGTTGESPTLTHEE-------HKRIIELCVEQVAKRVPVVAGAGSNS-TSEAVELAKH 112 (315)
T ss_dssp HHHHHHH-HHHHHHTTCSEEECSSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSS-HHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEeCccccCccccCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCC-HHHHHHHHHH
Confidence 4444443 3345579999999999775433332111 12223333332 2368876 455554 444444332
Q ss_pred ---cCCCEEEecHHhhhCC
Q 023442 134 ---KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP 149 (282)
.|+|+||+.-..+..|
T Consensus 113 A~~~Gadavlv~~P~y~~~ 131 (315)
T 3si9_A 113 AEKAGADAVLVVTPYYNRP 131 (315)
T ss_dssp HHHTTCSEEEEECCCSSCC
T ss_pred HHhcCCCEEEECCCCCCCC
Confidence 7999999997776666
No 397
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=80.59 E-value=12 Score=33.60 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=60.7
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |- + ..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 57 GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g~-s---t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 123 (314)
T 3d0c_A 57 GEFYALTIEEAKQVATRVTELVNGRATVVAGI--GY-S---VDTAIE-LGKSAIDSGADCVMIHQPV--HPYITDA---- 123 (314)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CS-S---HHHHHH-HHHHHHHTTCSEEEECCCC--CSCCCHH----
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCCeEEecC--Cc-C---HHHHHH-HHHHHHHcCCCEEEECCCC--CCCCCHH----
Confidence 3333335555567777776655 58998866 32 2 234444 3566789999999887532 2111111
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec--cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN--GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n--GdI~s~eda~~~l~-~g~DgV 139 (282)
--++++.++++. .++||+ +| |- .+++.+.++.+ ..+-||
T Consensus 124 ---~l~~~f~~va~a-~~lPiilYn~tg~-l~~~~~~~La~~pnIvgi 166 (314)
T 3d0c_A 124 ---GAVEYYRNIIEA-LDAPSIIYFKDAH-LSDDVIKELAPLDKLVGI 166 (314)
T ss_dssp ---HHHHHHHHHHHH-SSSCEEEEECCTT-SCTHHHHHHTTCTTEEEE
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEeCCCC-cCHHHHHHHHcCCCEEEE
Confidence 015566677765 479985 45 44 67888887765 333333
No 398
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=80.57 E-value=2.6 Score=36.52 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=31.5
Q ss_pred HHHHHhcCCCceEEEccCCCCH-H---------HHHHHHHcCCCEEEecHHhhhCCc
Q 023442 104 YYALLRDFPDLTFTLNGGINTV-D---------EVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~-e---------da~~~l~~g~DgVmIGRgal~nP~ 150 (282)
+.++.+.....+++..|||..- . .+.++++.|+|.+.+||+++..+.
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCC
Confidence 3344332223448889999632 0 366666789999999999987655
No 399
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=80.41 E-value=5.4 Score=34.89 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=50.1
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++.+++. +.+|.|-.-..+++|. ++.+.++.+ .+++||+.--=|.+.-++.++...|||+|.+==
T Consensus 66 iA~~y~~~-A~~IsVlTd~~~F~gs------------~~dL~~ir~-~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~ 131 (251)
T 1i4n_A 66 FIRMYDEL-ADAISILTEKHYFKGD------------PAFVRAARN-LTCRPILAKDFYIDTVQVKLASSVGADAILIIA 131 (251)
T ss_dssp HHHHHHHH-CSEEEEECCCSSSCCC------------THHHHHHHT-TCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEG
T ss_pred HHHHHHHh-CCceEEEecccccCCC------------HHHHHHHHH-hCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEec
Confidence 45566777 9999997655555664 466666655 469999987767777788887779999996543
Q ss_pred HhhhC
Q 023442 144 AAYQN 148 (282)
Q Consensus 144 gal~n 148 (282)
+++.+
T Consensus 132 a~l~~ 136 (251)
T 1i4n_A 132 RILTA 136 (251)
T ss_dssp GGSCH
T ss_pred ccCCH
Confidence 44443
No 400
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=80.41 E-value=19 Score=31.86 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=64.4
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-CCcCCcC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENR 94 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G-~~~ad~~ 94 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+- -. +..+.++ +++.++++|+|++-+-.-. |.. .+..
T Consensus 48 GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg--~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~~s~~--- 116 (294)
T 3b4u_A 48 GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL--VD---SIEDAAD-QSAEALNAGARNILLAPPS--YFKNVSDD--- 116 (294)
T ss_dssp TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC--CS---SHHHHHH-HHHHHHHTTCSEEEECCCC--SSCSCCHH---
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC--Cc---cHHHHHH-HHHHHHhcCCCEEEEcCCc--CCCCCCHH---
Confidence 4334445555578888887766 489987653 22 2344444 3566789999999887532 211 1111
Q ss_pred CCCCccHHHHHHHHhcCC--CceEE-Ec-----cCCCCHHHHHHHH-H-cC-CCEE
Q 023442 95 TIPPLKYEYYYALLRDFP--DLTFT-LN-----GGINTVDEVNAAL-R-KG-AHHV 139 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~--~ipVi-~n-----GdI~s~eda~~~l-~-~g-~DgV 139 (282)
.-++++.++++..+ ++||+ +| |--.+++.+.++. + .. +-||
T Consensus 117 ----~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgi 168 (294)
T 3b4u_A 117 ----GLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGV 168 (294)
T ss_dssp ----HHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEE
T ss_pred ----HHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEE
Confidence 11556667776543 78875 45 5445889888887 5 44 4444
No 401
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=80.34 E-value=20 Score=31.58 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=58.4
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.+++.|+|++-+-.-. |...+..
T Consensus 45 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 112 (294)
T 2ehh_A 45 GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT--GGN---ATHEAVH-LTAHAKEVGADGALVVVPY--YNKPTQR---- 112 (294)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCS---CHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 3333334444466777766654 48888765 322 2344454 3566789999999887531 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAAL 132 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l 132 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.
T Consensus 113 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 113 ---GLYEHFKTVAQE-VDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp ---HHHHHHHHHHHH-CCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 114566677665 478875 45 5446888888887
No 402
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=80.32 E-value=6.3 Score=35.05 Aligned_cols=73 Identities=8% Similarity=0.050 Sum_probs=43.6
Q ss_pred HHHHHhCCCCEEEEecC----CcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 65 YKVSSLSPTRHFIIHSR----KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 65 ~~~le~~Gv~~i~VH~R----t~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
++.++++|++.|.+-.+ .+...|.. .....+.+.++.+. .++||+++-.+...++++.+.+.|||+|.
T Consensus 34 a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~-------~~~~~~~i~~I~~~-~~iPv~~k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 34 AKIAEEAGAVAVMALERVPADIRAAGGVA-------RMADPTIVEEVMNA-VSIPVMAKARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHTTCSEEEECCC-------CCCCC-------CCCCHHHHHHHHHH-CSSCEEEEECTTCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEEcCCCcchhhhccCcc-------cCCCHHHHHHHHHh-CCCCEEecccccchHHHHHHHHCCCCEEE
Confidence 44567899999954321 11112210 01125667777665 48999864333337777777779999996
Q ss_pred ecHHhh
Q 023442 141 VGRAAY 146 (282)
Q Consensus 141 IGRgal 146 (282)
+-.++
T Consensus 106 -~~~~l 110 (305)
T 2nv1_A 106 -ESEVL 110 (305)
T ss_dssp -ECTTS
T ss_pred -EeccC
Confidence 54554
No 403
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=80.23 E-value=10 Score=33.25 Aligned_cols=104 Identities=9% Similarity=0.058 Sum_probs=56.6
Q ss_pred HHHHHHHhh-cCCccEEEEecCCCCCCCcHHHHHHHHHHHHHh-CCCCEEEEecCCcc-cCCCCcCCcCCCCCccHHHHH
Q 023442 29 GEAMSVIAA-NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL-SPTRHFIIHSRKAL-LNGISPAENRTIPPLKYEYYY 105 (282)
Q Consensus 29 ~eiv~~v~~-~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~-~Gv~~i~VH~Rt~~-~~G~~~ad~~~i~~~~~~~i~ 105 (282)
.++++.+++ ..+.|+.+=+.. .+ .++..+ +++.+++ +|+|.|.+|--... ..|. ..+-.-+..-.+.+.
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~--~~---~~~~~~-~a~~~~~~~g~d~iei~~~~p~~~~g~--~~~g~~~~~~~eii~ 157 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAG--SE---EADYVA-VCAKIGDAANVKAIELNISCPNVKHGG--QAFGTDPEVAAALVK 157 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECC--SS---HHHHHH-HHHHHTTSTTEEEEEEECCSEEGGGTT--EEGGGCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcC--CC---HHHHHH-HHHHHhccCCCCEEEEeCCCCCCCCch--hhhcCCHHHHHHHHH
Confidence 445666766 337788776642 22 333333 4556677 99999999953211 0110 000000011134455
Q ss_pred HHHhcCCCceEEE--ccCCCCHHHH-HHHHHcCCCEEEe
Q 023442 106 ALLRDFPDLTFTL--NGGINTVDEV-NAALRKGAHHVMV 141 (282)
Q Consensus 106 ~l~~~~~~ipVi~--nGdI~s~eda-~~~l~~g~DgVmI 141 (282)
++.+. .++||+. +.++.+..++ +.+.+.|+|+|.+
T Consensus 158 ~v~~~-~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 158 ACKAV-SKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHH-CSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHh-cCCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 55544 3788864 4466776664 4444599999998
No 404
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=80.16 E-value=6.8 Score=37.29 Aligned_cols=96 Identities=10% Similarity=0.125 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.++.+|. + .+++-+++
T Consensus 199 ~~~di~rv~avRea~G~d~~L~vDaN~~wt~----~~Ai~-~~~~Le~~~l~~iE--------E--------Pl~~dd~~ 257 (455)
T 3fxg_A 199 LRKNVEFLRKHREAVGPDFPIMVDCYMSLNV----SYTIE-LVKACLDLNINWWE--------E--------CLSPDDTD 257 (455)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEECTTCCCH----HHHHH-HHHHTGGGCCSEEE--------C--------CSCGGGGG
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCCCCCH----HHHHH-HHHhcccCCcceec--------C--------CCCcchHH
Confidence 445566677888776 57788877767753 22223 35566777776652 1 11222345
Q ss_pred HHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 103 YYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 103 ~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
..+++.+..+.+||.+.=.+.|..|+.++++ ..+|.|.+
T Consensus 258 ~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~ 297 (455)
T 3fxg_A 258 GFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp GHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECC
T ss_pred HHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEE
Confidence 5566666544588877777999999999998 66887643
No 405
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=80.09 E-value=16 Score=32.37 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=58.8
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ .++.++++|+|++-+..-. |...+..
T Consensus 52 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~~~~---- 119 (297)
T 3flu_A 52 GESATLSVEEHTAVIEAVVKHVAKRVPVIAGT--GAN---NTVEAIA-LSQAAEKAGADYTLSVVPY--YNKPSQE---- 119 (297)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CHHHHHH-HHHHHHHcCCCEEEECCCC--CCCCCHH----
Confidence 3333334555567777776655 58998854 322 2345554 3566789999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 120 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 120 ---GIYQHFKTIAEA-TSIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp ---HHHHHHHHHHHH-CCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEECCchhccCCCHHHHHHHHc
Confidence 114566677665 478875 44 55567888877765
No 406
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=80.02 E-value=8.9 Score=33.72 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=43.4
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEE-----ccC-CCCHHHHHHHH-------H
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-----NGG-INTVDEVNAAL-------R 133 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~-----nGd-I~s~eda~~~l-------~ 133 (282)
.+++.|++.|.+=..- ...|.+|. +..+..+++. .+|||.. .|| +.|.++++.|. +
T Consensus 16 ~A~~~GAdRIELc~~L-~~GGlTPS---------~g~i~~~~~~-~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 84 (256)
T 1twd_A 16 TAQQNGADRVELCAAP-KEGGLTPS---------LGVLKSVRQR-VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRE 84 (256)
T ss_dssp HHHHTTCSEEEECBCG-GGTCBCCC---------HHHHHHHHHH-CCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCc-ccCCCCCC---------HHHHHHHHHH-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 4578999999987533 23566542 5666566554 5788865 565 45665555544 3
Q ss_pred cCCCEEEec
Q 023442 134 KGAHHVMVG 142 (282)
Q Consensus 134 ~g~DgVmIG 142 (282)
.|+|||.+|
T Consensus 85 ~GadGvV~G 93 (256)
T 1twd_A 85 LGFPGLVTG 93 (256)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 799999999
No 407
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.01 E-value=17 Score=32.57 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=61.7
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 68 GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---st~eai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 135 (314)
T 3qze_A 68 GESATLDVEEHIQVIRRVVDQVKGRIPVIAGT--GAN---STREAVA-LTEAAKSGGADACLLVTPY--YNKPTQE---- 135 (314)
T ss_dssp GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CHHHHHH-HHHHHHHcCCCEEEEcCCC--CCCCCHH----
Confidence 4333334555566777666654 58998854 322 2345554 3566789999999887532 1111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
--++++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 136 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 182 (314)
T 3qze_A 136 ---GMYQHFRHIAEA-VAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGI 182 (314)
T ss_dssp ---HHHHHHHHHHHH-SCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEE
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 114566677665 478875 44 65668888888776 333333
No 408
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=79.94 E-value=2.5 Score=37.66 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=45.8
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH---cCCCEEE
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR---KGAHHVM 140 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~---~g~DgVm 140 (282)
+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+..+.+.++.... .|+|+||
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavl 100 (292)
T 2vc6_A 28 EWQIEEGSFGLVPCGTTGESPTLSKSE-------HEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVL 100 (292)
T ss_dssp HHHHHTTCSEEETTSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEE
Confidence 344578999999998775433332211 122233333321 358875 6777655554443332 7999999
Q ss_pred ecHHhhhCC
Q 023442 141 VGRAAYQNP 149 (282)
Q Consensus 141 IGRgal~nP 149 (282)
+--..+..|
T Consensus 101 v~~P~y~~~ 109 (292)
T 2vc6_A 101 IVSPYYNKP 109 (292)
T ss_dssp EECCCSSCC
T ss_pred EcCCCCCCC
Confidence 997777666
No 409
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=79.90 E-value=13 Score=33.60 Aligned_cols=106 Identities=8% Similarity=0.049 Sum_probs=63.0
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+- -. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 79 GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg--~~---st~eai~-la~~A~~~Gadavlv~~P~--Y~~~s~~---- 146 (332)
T 2r8w_A 79 GIYMYLTREERRRAIEAAATILRGRRTLMAGIG--AL---RTDEAVA-LAKDAEAAGADALLLAPVS--YTPLTQE---- 146 (332)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--CS---SHHHHHH-HHHHHHHHTCSEEEECCCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC--CC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 4333335555567777776655 589988653 22 2344444 3566788999999887532 2111111
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
--++++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 147 ---~l~~~f~~VA~a-~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgi 193 (332)
T 2r8w_A 147 ---EAYHHFAAVAGA-TALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAI 193 (332)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEE
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEE
Confidence 115566777765 478985 45 54468998888876 444444
No 410
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=79.88 E-value=18 Score=31.86 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=59.1
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.+++.|+|++-+..-. |...+..
T Consensus 45 GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 112 (292)
T 2vc6_A 45 GESPTLSKSEHEQVVEITIKTANGRVPVIAGA--GSN---STAEAIA-FVRHAQNAGADGVLIVSPY--YNKPTQE---- 112 (292)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCc---cHHHHHH-HHHHHHHcCCCEEEEcCCC--CCCCCHH----
Confidence 4333345555567777776654 58888765 322 2344444 4566789999999887632 1111110
Q ss_pred CCCccHHHHHHHHhcCCCceEEE------ccCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTL------NGGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~------nGdI~s~eda~~~l~ 133 (282)
--++++.++++. .++||+. .|--.+++.+.++.+
T Consensus 113 ---~l~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 113 ---GIYQHFKAIDAA-STIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 014556667665 4788865 454458888887765
No 411
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=79.75 E-value=5.7 Score=35.31 Aligned_cols=84 Identities=10% Similarity=0.055 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecC--------------CCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRI--------------GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGIS 89 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~--------------G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~ 89 (282)
+-..+.+.|+++.++ ++||..=+.+ |-+ +..+++++. ++.++++|++.|.+.+-+
T Consensus 116 dg~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt--~~a~~~i~r-A~a~~eAGA~~ivlE~vp------- 184 (275)
T 1o66_A 116 GGVWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRG--GKAQALLND-AKAHDDAGAAVVLMECVL------- 184 (275)
T ss_dssp CSGGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-------------CHHHHHHH-HHHHHHTTCSEEEEESCC-------
T ss_pred CcHHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeCh--HHHHHHHHH-HHHHHHcCCcEEEEecCC-------
Confidence 333455666666554 7888633321 111 234566654 567899999999998732
Q ss_pred cCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 90 PAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 90 ~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
-+...++.++ .++|+|+-|.= .+|||=++
T Consensus 185 -----------~~~a~~it~~-l~iP~igIGaG-----------~~~dgQvL 213 (275)
T 1o66_A 185 -----------AELAKKVTET-VSCPTIGIGAG-----------ADCDGQVL 213 (275)
T ss_dssp -----------HHHHHHHHHH-CSSCEEEESSC-----------SCSSEEEE
T ss_pred -----------HHHHHHHHHh-CCCCEEEECCC-----------CCCCccee
Confidence 1334556565 47999875532 46887544
No 412
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=79.61 E-value=4.2 Score=36.67 Aligned_cols=85 Identities=14% Similarity=-0.049 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEEE-ccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFTL-NGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi~-nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|......+..+ +.+.+...++. ..++|||+ .|.. +.+++.++.+
T Consensus 44 ~~~l~~l-v~~li~~Gv~Gi~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~-~t~~ai~la~~ 114 (315)
T 3na8_A 44 LPALGRS-IERLIDGGVHAIAPLGSTGEGAYLSDPE-------WDEVVDFTLKTVAHRVPTIVSVSDL-TTAKTVRRAQF 114 (315)
T ss_dssp HHHHHHH-HHHHHHTTCSEEECSSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCS-SHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHH
Confidence 4444333 3445579999999998775433322111 12223333332 23688864 5555 4444444332
Q ss_pred ---cCCCEEEecHHhhhCCc
Q 023442 134 ---KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 115 A~~~Gadavlv~~P~y~~~s 134 (315)
T 3na8_A 115 AESLGAEAVMVLPISYWKLN 134 (315)
T ss_dssp HHHTTCSEEEECCCCSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 79999999977776663
No 413
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=79.48 E-value=11 Score=35.34 Aligned_cols=70 Identities=14% Similarity=0.178 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCCCC-HHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINT-VDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI~s-~eda~~~l~- 133 (282)
..++++++.+++++.++.+|. +.. ++-+|+...++.+... ++||++-=-+.| ++++.++++
T Consensus 263 ~~eai~~~~~ll~~y~i~~IE--------dPl--------~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~ 326 (417)
T 3qn3_A 263 SEALIERYVELCAKYPICSIE--------DGL--------AENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIK 326 (417)
T ss_dssp HHHHHHHHHHHHHHSCEEEEE--------SSS--------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcceeEEe--------cCC--------CcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHh
Confidence 456666665567888765552 122 1223676666665532 588764444455 999999998
Q ss_pred cCCCEEEec
Q 023442 134 KGAHHVMVG 142 (282)
Q Consensus 134 ~g~DgVmIG 142 (282)
..||.|.+=
T Consensus 327 ~a~d~i~iK 335 (417)
T 3qn3_A 327 KMANAVLIK 335 (417)
T ss_dssp TCCSEEEEC
T ss_pred CCCCEEEec
Confidence 678988653
No 414
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=79.38 E-value=19 Score=32.22 Aligned_cols=106 Identities=11% Similarity=0.044 Sum_probs=61.9
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.++++|+|++-+-.-. |...+.
T Consensus 69 GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~----- 135 (315)
T 3na8_A 69 GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV--SDL---TTAKTVR-RAQFAESLGAEAVMVLPIS--YWKLNE----- 135 (315)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEECCCC--SSCCCH-----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCH-----
Confidence 4333334555567777776654 58888864 322 2345554 3567789999999987532 111111
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHH-HH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAA-LR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~-l~-~g~DgV 139 (282)
..-++++.++++. .++||+ +| |--.+++.+.++ .+ ..+-||
T Consensus 136 --~~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgi 184 (315)
T 3na8_A 136 --AEVFQHYRAVGEA-IGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMV 184 (315)
T ss_dssp --HHHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEE
T ss_pred --HHHHHHHHHHHHh-CCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEE
Confidence 0115566677765 478875 55 555678888888 44 444444
No 415
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=79.28 E-value=17 Score=33.84 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=62.9
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCC-CEEEEecCCcccCCCCcCCcCC
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv-~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
.||.-++|..++.++-+ .+.||.+|. |.. +++|+... +..+.+.|. +.+.+|+- ..| ..+.
T Consensus 140 IgS~~~~N~pLL~~va~-----~gKPViLSt--Gma---Tl~Ei~~A-ve~i~~~Gn~~iiLlhc~-s~Y--Ptp~---- 201 (385)
T 1vli_A 140 IASYEINHLPLLKYVAR-----LNRPMIFST--AGA---EISDVHEA-WRTIRAEGNNQIAIMHCV-AKY--PAPP---- 201 (385)
T ss_dssp ECGGGTTCHHHHHHHHT-----TCSCEEEEC--TTC---CHHHHHHH-HHHHHTTTCCCEEEEEEC-SSS--SCCG----
T ss_pred ECcccccCHHHHHHHHh-----cCCeEEEEC--CCC---CHHHHHHH-HHHHHHCCCCcEEEEecc-CCC--CCCh----
Confidence 36778999998666543 489999986 442 35565443 456678898 66677852 222 1111
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCC-HHHHHHHHHcCCC
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALRKGAH 137 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s-~eda~~~l~~g~D 137 (282)
..+++..+..+++.++++||..++=-.. ..-+..+...||+
T Consensus 202 -~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlGA~ 243 (385)
T 1vli_A 202 -EYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAK 243 (385)
T ss_dssp -GGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTTCS
T ss_pred -hhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcCCC
Confidence 1234666767766665899976543333 4555555567888
No 416
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=79.27 E-value=13 Score=34.41 Aligned_cols=45 Identities=7% Similarity=0.060 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+++-+++...++.+. ..+||.+.=.+.|..|+.++++ ..+|.|.+
T Consensus 254 ~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~ 299 (393)
T 3u9i_A 254 VAKDDEEGLRRLTAT-RRVPVAADESVASATDAARLARNAAVDVLNI 299 (393)
T ss_dssp SCTTCTTHHHHHHHT-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCcHHHHHHHHhh-CCCcEEeCCcCCCHHHHHHHHHcCCCCEEEe
Confidence 344456677777665 5899999888999999999998 66887765
No 417
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=78.92 E-value=12 Score=30.80 Aligned_cols=89 Identities=10% Similarity=-0.003 Sum_probs=50.5
Q ss_pred HHHHHHHhhc-CCccEEE--EecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHH
Q 023442 29 GEAMSVIAAN-TNVPVSV--KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 105 (282)
Q Consensus 29 ~eiv~~v~~~-~~ipvsv--KiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~ 105 (282)
.++++++++. .++||.+ |+.-+ .+. ..+.+.++|+|.+++|.-... . ....+.
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~------~~~----~~~~~~~~Gad~v~v~~~~~~------~--------~~~~~~ 96 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDG------GHF----ESQLLFDAGADYVTVLGVTDV------L--------TIQSCI 96 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSC------HHH----HHHHHHHTTCSEEEEETTSCH------H--------HHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccc------hHH----HHHHHHhcCCCEEEEeCCCCh------h--------HHHHHH
Confidence 4678888876 4788744 44311 111 123456899999999974310 0 122233
Q ss_pred HHHhcCCCceEEE-ccCCCCH-HHHHHHHHcCCCEEEec
Q 023442 106 ALLRDFPDLTFTL-NGGINTV-DEVNAALRKGAHHVMVG 142 (282)
Q Consensus 106 ~l~~~~~~ipVi~-nGdI~s~-eda~~~l~~g~DgVmIG 142 (282)
+.+++. +++++. -=...|+ +.++.+.+.|+|.|.+.
T Consensus 97 ~~~~~~-g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 97 RAAKEA-GKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHH-TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHc-CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 333433 555543 1224555 55777777899998764
No 418
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=78.81 E-value=13 Score=34.38 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=35.9
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
+++-+++...++.+. ..+||.+.=.+.|..|+.++++ ..+|.|.+
T Consensus 225 ~~~~d~~~~~~l~~~-~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~ 270 (389)
T 3s5s_A 225 VPRDDWDGMKEVTRR-AGVDVAADESAASAEDVLRVAAERAATVVNI 270 (389)
T ss_dssp SCTTCHHHHHHHHHH-SSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred CCcccHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 344457777777765 5799999888999999999998 66888876
No 419
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=78.78 E-value=1.6 Score=38.50 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=31.6
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchhh
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLGH 155 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~~ 155 (282)
+++|++.|.| +++.+.+++. .++||+.||++.|. |. |..-
T Consensus 207 ~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~-F~~I 247 (255)
T 3qst_A 207 KVRILYGGSV-KPNNCNELAACPDVDGFLVGGASLE-AG-FINI 247 (255)
T ss_dssp HCEEEECSCC-CTTTHHHHHHSTTCCEEEECGGGGS-TT-HHHH
T ss_pred cccEEEcCCc-CHhHHHHHhcCCCCCEEEeeHHHhh-HH-HHHH
Confidence 5899999998 5555666665 99999999999998 75 5443
No 420
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=78.61 E-value=13 Score=27.09 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=42.6
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
.+++...|.+.+.-......| ++.+..+.+..+.+|||.-.+-.+.+...++++.|+++++
T Consensus 46 ~l~~~~~dlvi~d~~l~~~~g-------------~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l 106 (130)
T 3eod_A 46 LLGGFTPDLMICDIAMPRMNG-------------LKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVL 106 (130)
T ss_dssp HHTTCCCSEEEECCC-----C-------------HHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEE
T ss_pred HHhcCCCCEEEEecCCCCCCH-------------HHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEE
Confidence 345667888877653221111 6777777766678999888887899999999998999863
No 421
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=78.54 E-value=18 Score=32.17 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=61.6
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 57 GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g~~---st~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 124 (306)
T 1o5k_A 57 GESPTVNEDEREKLVSRTLEIVDGKIPVIVGA--GTN---STEKTLK-LVKQAEKLGANGVLVVTPY--YNKPTQE---- 124 (306)
T ss_dssp GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---CHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCHH----
T ss_pred cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC--CCc---cHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 4333335555567777776654 58988765 322 2344444 3566788999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHH-H-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAAL-R-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l-~-~g~DgV 139 (282)
.-++++.++++. .++||+ +| |--.+++.+.++. + ..+-||
T Consensus 125 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 172 (306)
T 1o5k_A 125 ---GLYQHYKYISER-TDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGI 172 (306)
T ss_dssp ---HHHHHHHHHHTT-CSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 114566677664 578875 45 5445888888887 5 444444
No 422
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=78.40 E-value=18 Score=31.97 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHhhcC---CccEEEEecCCCCCC-------CcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCc
Q 023442 24 DPKFVGEAMSVIAANT---NVPVSVKCRIGVDDH-------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAEN 93 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~---~ipvsvKiR~G~d~~-------~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~ 93 (282)
..+...+-|++++++. ++|+.|--|.--.-. +.+++.++. ++.++++|+|.|.+++.+.
T Consensus 124 ~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~R-a~ay~eAGAd~i~~e~~~~---------- 192 (275)
T 2ze3_A 124 DLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRR-GQAYADAGADGIFVPLALQ---------- 192 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHH-HHHHHHTTCSEEECTTCCC----------
T ss_pred CHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHH-HHHHHHCCCCEEEECCCCC----------
Confidence 3345555666666552 677777667411000 124555554 4567889999999988421
Q ss_pred CCCCCccHHHHHHHHhcCCCceEEEcc--CCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 94 RTIPPLKYEYYYALLRDFPDLTFTLNG--GINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 94 ~~i~~~~~~~i~~l~~~~~~ipVi~nG--dI~s~eda~~~l~~g~DgVmIGRga 145 (282)
.+.+.++.+.. ++|+-.|+ +..|. .++-+.|+.-|..|-.+
T Consensus 193 -------~~~~~~i~~~~-~~P~n~~~~~~~~~~---~eL~~lGv~~v~~~~~~ 235 (275)
T 2ze3_A 193 -------SQDIRALADAL-RVPLNVMAFPGSPVP---RALLDAGAARVSFGQSL 235 (275)
T ss_dssp -------HHHHHHHHHHC-SSCEEEECCTTSCCH---HHHHHTTCSEEECTTHH
T ss_pred -------HHHHHHHHHhc-CCCEEEecCCCCCCH---HHHHHcCCcEEEEChHH
Confidence 34556666654 68876553 34444 45555789988887443
No 423
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=78.38 E-value=20 Score=32.24 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 25 PKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 25 p~~~~eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
.+.+..-++.|.... ++||++.+-.|+.+ .+.+.+. .+.++++|+.++.+-+.+
T Consensus 64 ~~em~~~~~~I~~~~~~~PviaD~d~Gyg~---~~~v~~t-v~~l~~aGaagv~iEDq~ 118 (302)
T 3fa4_A 64 LNDMRANAEMISNISPSTPVIADADTGYGG---PIMVART-TEQYSRSGVAAFHIEDQV 118 (302)
T ss_dssp HHHHHHHHHHHHTTSTTSCEEEECTTTTSS---HHHHHHH-HHHHHHTTCCEEEECSBC
T ss_pred HHHHHHHHHHHHhhccCCCEEEECCCCCCC---HHHHHHH-HHHHHHcCCcEEEECCCC
Confidence 445556667777654 89999999999754 2344444 455678999999997644
No 424
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=78.17 E-value=1.6 Score=38.90 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=31.2
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchh
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLG 154 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~ 154 (282)
+++|++.|.| +++.+.+++. .++||+.||++.|. |. |..
T Consensus 226 ~vrILYGGSV-~~~N~~el~~~~diDG~LVGgASL~-~~-F~~ 265 (271)
T 3krs_A 226 NLRIIYGGSV-TPDNCNELIKCADIDGFLVGGASLK-PT-FAK 265 (271)
T ss_dssp HCCEEECSCC-CTTTHHHHHHSTTCCEEEESGGGGS-TT-HHH
T ss_pred CccEEEcCCc-CHHHHHHHhcCCCCCEEEeeHHhhh-HH-HHH
Confidence 5899999998 5556666665 99999999999998 75 543
No 425
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=77.94 E-value=13 Score=28.04 Aligned_cols=61 Identities=13% Similarity=0.006 Sum_probs=44.3
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
+.+...|.|.+.-...... .++.+..+.+..+.+|||.-.+-.+.+.+.++++.|+++++.
T Consensus 57 l~~~~~dlii~d~~l~~~~-------------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3eul_A 57 IKAHLPDVALLDYRMPGMD-------------GAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLL 117 (152)
T ss_dssp HHHHCCSEEEEETTCSSSC-------------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHhcCCCEEEEeCCCCCCC-------------HHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEe
Confidence 3455788888875432111 156677777666789999888888999999999999998643
No 426
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.84 E-value=5.1 Score=35.02 Aligned_cols=78 Identities=15% Similarity=0.111 Sum_probs=43.4
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCc-CCcCCCCC---------c----cHHHHHHHHhcCCCceEEEccCCC-----C
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISP-AENRTIPP---------L----KYEYYYALLRDFPDLTFTLNGGIN-----T 124 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~-ad~~~i~~---------~----~~~~i~~l~~~~~~ipVi~nGdI~-----s 124 (282)
+++.++++|+|.|.+-.-. + .| +|+..++. + -.+.+.++.+..+++||++-+... .
T Consensus 36 ~~~~l~~~GaD~ieig~P~---s--dp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g 110 (268)
T 1qop_A 36 IIDTLIDAGADALELGVPF---S--DPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNG 110 (268)
T ss_dssp HHHHHHHTTCSSEEEECCC---S--CCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCCC---C--CccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhh
Confidence 3456789999999984311 0 01 12111110 0 124456666554689998744221 1
Q ss_pred -HHHHHHHHHcCCCEEEecHHhh
Q 023442 125 -VDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 125 -~eda~~~l~~g~DgVmIGRgal 146 (282)
.+.++.+.+.|+|||.+.-..+
T Consensus 111 ~~~~~~~~~~aGadgii~~d~~~ 133 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVADVPV 133 (268)
T ss_dssp HHHHHHHHHHHTCCEEEETTCCG
T ss_pred HHHHHHHHHHcCCCEEEEcCCCH
Confidence 3455556669999999964443
No 427
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=77.75 E-value=13 Score=34.72 Aligned_cols=68 Identities=12% Similarity=0.245 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccC-CCCHHHHHHHHH-c
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG-INTVDEVNAALR-K 134 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGd-I~s~eda~~~l~-~ 134 (282)
..+.++++.+.+++.++.+|. +.. ++-+|+...++.+. .++||.+.=. +++++++.++++ .
T Consensus 269 ~~~ai~~~~~~l~~~~i~~iE--------eP~--------~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~i~~~ 331 (427)
T 2pa6_A 269 REELLDYYKALVDEYPIVSIE--------DPF--------HEEDFEGFAMITKE-LDIQIVGDDLFVTNVERLRKGIEMK 331 (427)
T ss_dssp HHHHHHHHHHHHHHSCEEEEE--------CCS--------CTTCHHHHHHHHHH-SSSEEEESTTTTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhCCCcEEE--------cCC--------ChhhHHHHHHHHhh-CCCeEEeCccccCCHHHHHHHHHhC
Confidence 445555556677887765552 111 22236767777665 5799854443 556999999998 6
Q ss_pred CCCEEEe
Q 023442 135 GAHHVMV 141 (282)
Q Consensus 135 g~DgVmI 141 (282)
.||.|.+
T Consensus 332 a~d~i~i 338 (427)
T 2pa6_A 332 AANALLL 338 (427)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 6898876
No 428
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=77.73 E-value=15 Score=30.80 Aligned_cols=89 Identities=12% Similarity=0.118 Sum_probs=49.3
Q ss_pred HHHHHHHhhcC-CccE--EEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHH
Q 023442 29 GEAMSVIAANT-NVPV--SVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 105 (282)
Q Consensus 29 ~eiv~~v~~~~-~ipv--svKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~ 105 (282)
-++++++++.. +.|+ .+|+- +.. +. ..+.+.++|++.+++|+-... . ..+.+.
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~---d~p---~~----~~~~~~~aGad~i~vh~~~~~------~--------~~~~~~ 102 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTT---DGG---AI----LSRMAFEAGADWITVSAAAHI------A--------TIAACK 102 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEEC---SCH---HH----HHHHHHHHTCSEEEEETTSCH------H--------HHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEEeec---ccH---HH----HHHHHHhcCCCEEEEecCCCH------H--------HHHHHH
Confidence 46788888763 4444 55652 221 11 124456899999999974210 0 012222
Q ss_pred HHHhcCCCceEEE-ccCCCCHHHHHHHHHcCCCEEEec
Q 023442 106 ALLRDFPDLTFTL-NGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 106 ~l~~~~~~ipVi~-nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
+.+++. +++.+. -=++.|++++.++.+.|+|.+.+.
T Consensus 103 ~~~~~~-g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 103 KVADEL-NGEIQIEIYGNWTMQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp HHHHHH-TCEEEEECCSSCCHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHh-CCccceeeeecCCHHHHHHHHHcCccceeee
Confidence 223332 444432 222357788888877899987663
No 429
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=77.63 E-value=16 Score=32.33 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=61.2
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 49 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~~~~---- 116 (293)
T 1f6k_A 49 GENFMLSTEEKKEIFRIAKDEAKDQIALIAQV--GSV---NLKEAVE-LGKYATELGYDCLSAVTPF--YYKFSFP---- 116 (293)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCS---CHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCHH----
T ss_pred cchhhCCHHHHHHHHHHHHHHhCCCCeEEEec--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 4333345555567777776655 58888765 332 2344444 3566788999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 117 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 163 (293)
T 1f6k_A 117 ---EIKHYYDTIIAE-TGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGV 163 (293)
T ss_dssp ---HHHHHHHHHHHH-HCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEE
T ss_pred ---HHHHHHHHHHHh-CCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEE
Confidence 114556666664 468875 45 53458888888876 333333
No 430
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=77.53 E-value=12 Score=33.62 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCC
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 82 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt 82 (282)
..+.+...++.|...+ ++||++.+-.|+.+ .+.+.+. .+.++++|+.++.+-+.+
T Consensus 70 t~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~---~~~v~~~-v~~l~~aGaagv~iEDq~ 126 (307)
T 3lye_A 70 QLHDMRDNADMIANLDPFGPPLIADMDTGYGG---PIMVART-VEHYIRSGVAGAHLEDQI 126 (307)
T ss_dssp CHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS---HHHHHHH-HHHHHHTTCCEEEECCBC
T ss_pred CHHHHHHHHHhhhccCCCCCcEEEECCCCCCC---HHHHHHH-HHHHHHcCCeEEEEcCCC
Confidence 3455666777777765 49999999999754 2344444 455678999999997644
No 431
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=77.44 E-value=15 Score=32.63 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=61.5
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+|++-+-.-. |...+..
T Consensus 56 GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~--y~~~s~~---- 123 (303)
T 2wkj_A 56 GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV--GCV---STAESQQ-LAASAKRYGFDAVSAVTPF--YYPFSFE---- 123 (303)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---SHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCHH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHHHHHH-HHHHHHhCCCCEEEecCCC--CCCCCHH----
Confidence 4333335555567777776655 58888865 322 2344444 3566788999999887532 2111111
Q ss_pred CCCccHHHHHHHHhcCCC-ceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 96 IPPLKYEYYYALLRDFPD-LTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~-ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
.-++++.++++. .+ +||+ +| |--.+++.+.++.+ ..+-||
T Consensus 124 ---~l~~~f~~va~a-~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 171 (303)
T 2wkj_A 124 ---EHCDHYRAIIDS-ADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 171 (303)
T ss_dssp ---HHHHHHHHHHHH-HTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEE
T ss_pred ---HHHHHHHHHHHh-CCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 114566677665 35 8875 45 54468888888876 444444
No 432
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=77.14 E-value=4.1 Score=37.29 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEE-EccCCCCHHHHHHHHH--
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LNGGINTVDEVNAALR-- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi-~nGdI~s~eda~~~l~-- 133 (282)
.+.+.+.+ +.+.+.|++.|.+-|-|......+... +.+.+.. ... .++||| +.|+..+.+.++....
T Consensus 46 ~~~l~~lv-~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~-~~~-grvpViaGvg~~st~eai~la~~A~ 115 (344)
T 2hmc_A 46 FDALVRKG-KELIADGMSAVVYCGSMGDWPLLTDEQ-------RMEGVER-LVK-AGIPVIVGTGAVNTASAVAHAVHAQ 115 (344)
T ss_dssp HHHHHHHH-HHHHHTTCCCEEESSGGGTGGGSCHHH-------HHHHHHH-HHH-TTCCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEeCccCcChhhCCHHH-------HHHHHHH-HhC-CCCcEEEecCCCCHHHHHHHHHHHH
Confidence 33343333 344578999999999775433332111 1122222 211 368886 5666554444443332
Q ss_pred -cCCCEEEecHHhhhC
Q 023442 134 -KGAHHVMVGRAAYQN 148 (282)
Q Consensus 134 -~g~DgVmIGRgal~n 148 (282)
.|+|+||+--..+..
T Consensus 116 ~~Gadavlv~~P~y~~ 131 (344)
T 2hmc_A 116 KVGAKGLMVIPRVLSR 131 (344)
T ss_dssp HHTCSEEEECCCCSSS
T ss_pred hcCCCEEEECCCccCC
Confidence 799999999887766
No 433
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=77.00 E-value=4.1 Score=36.64 Aligned_cols=85 Identities=11% Similarity=0.016 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
++.+.+.+ +.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++||| +.|+ .+.+.++....
T Consensus 32 ~~~l~~lv-~~li~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A 102 (314)
T 3d0c_A 32 WKGLDDNV-EFLLQNGIEVIVPNGNTGEFYALTIEE-------AKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSA 102 (314)
T ss_dssp HHHHHHHH-HHHHHTTCSEECTTSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEECcccCChhhCCHHH-------HHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHH
Confidence 43443433 344578999999988775433332111 122233333322 368986 6788 54444433332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+--..+..|.
T Consensus 103 ~~~Gadavlv~~P~y~~~s 121 (314)
T 3d0c_A 103 IDSGADCVMIHQPVHPYIT 121 (314)
T ss_dssp HHTTCSEEEECCCCCSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 79999999977776663
No 434
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=76.50 E-value=13 Score=34.97 Aligned_cols=43 Identities=9% Similarity=0.245 Sum_probs=32.4
Q ss_pred cHHHHHHHHhcC-CCceEEEccC-CCCHHHHHHHHH-cCCCEEEec
Q 023442 100 KYEYYYALLRDF-PDLTFTLNGG-INTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 100 ~~~~i~~l~~~~-~~ipVi~nGd-I~s~eda~~~l~-~g~DgVmIG 142 (282)
+|+...++.+.. .++||.+.=. ++|++++.++++ ..||.|.+=
T Consensus 308 d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik 353 (444)
T 1w6t_A 308 DWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK 353 (444)
T ss_dssp CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred hHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc
Confidence 467666666542 2689877666 899999999998 678988763
No 435
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=76.43 E-value=8.9 Score=33.07 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCceEEEccCCCCHH---HHHHHHHcCCCEEEec
Q 023442 102 EYYYALLRDFPDLTFTLNGGINTVD---EVNAALRKGAHHVMVG 142 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi~nGdI~s~e---da~~~l~~g~DgVmIG 142 (282)
+.+.++.+. +++||+.++.. ++. .++.+.+.|+|||.+.
T Consensus 84 ~~i~~ir~~-~~~Pv~~m~~~-~~~~~~~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 84 EMLREVTPE-LSCPVVLLSYY-KPIMFRSLAKMKEAGVHGLIVP 125 (262)
T ss_dssp HHHHHHGGG-CSSCEEEECCS-HHHHSCCTHHHHHTTCCEEECT
T ss_pred HHHHHHHhc-CCCCEEEEecC-cHHHHHHHHHHHHcCCCEEEEc
Confidence 445555443 68999987633 222 2334666999999986
No 436
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=76.38 E-value=7 Score=34.35 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=44.3
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCH----HH----
Q 023442 56 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV----DE---- 127 (282)
Q Consensus 56 ~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~----ed---- 127 (282)
++.+.+..+++...++|++.+...+.. ...+++... +-.++..+||.-. .|
T Consensus 141 ~~~e~v~~~A~~a~~~G~dGvV~s~~e------------------~~~ir~~~~---~~f~~vtPGIr~~g~~~gDQ~Rv 199 (259)
T 3tfx_A 141 PMAEQVLSLAKMAKHSGADGVICSPLE------------------VKKLHENIG---DDFLYVTPGIRPAGNAKDDQSRV 199 (259)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEECCGGG------------------HHHHHHHHC---SSSEEEECCCCCC----------
T ss_pred CHHHHHHHHHHHHHHhCCCEEEECHHH------------------HHHHHhhcC---CccEEEcCCcCCCCCCcCCcccc
Confidence 344445456777788999998876421 222333322 2224455555421 11
Q ss_pred --HHHHHHcCCCEEEecHHhhhCCc
Q 023442 128 --VNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 128 --a~~~l~~g~DgVmIGRgal~nP~ 150 (282)
+.++++.|+|.+.+||++...+.
T Consensus 200 ~T~~~a~~aGad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 200 ATPKMAKEWGSSAIVVGRPITLASD 224 (259)
T ss_dssp -CHHHHHHTTCSEEEECHHHHTSSS
T ss_pred CCHHHHHHcCCCEEEEChHHhCCCC
Confidence 55566789999999999987665
No 437
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=76.33 E-value=3.9 Score=36.82 Aligned_cols=83 Identities=10% Similarity=-0.032 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEEEc-cCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLN-GGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~n-GdI~s~eda~~~l~- 133 (282)
++.+.+. .+.+.+.|++.|.+-|-|+.....+... +.+.+...++.. .++|||+. |. |.+++.++.+
T Consensus 32 ~~~l~~l-v~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~v~~~~v~~~~grvpViaGvg~--~t~~ai~la~~ 101 (316)
T 3e96_A 32 WHHYKET-VDRIVDNGIDVIVPCGNTSEFYALSLEE-------AKEEVRRTVEYVHGRALVVAGIGY--ATSTAIELGNA 101 (316)
T ss_dssp HHHHHHH-HHHHHTTTCCEECTTSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEeCccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEEeCc--CHHHHHHHHHH
Confidence 3343333 3445589999999998775433222111 122233333322 36898754 54 6666665543
Q ss_pred ---cCCCEEEecHHhhhCC
Q 023442 134 ---KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 134 ---~g~DgVmIGRgal~nP 149 (282)
.|+|+||+.-..+..|
T Consensus 102 A~~~Gadavlv~~P~y~~~ 120 (316)
T 3e96_A 102 AKAAGADAVMIHMPIHPYV 120 (316)
T ss_dssp HHHHTCSEEEECCCCCSCC
T ss_pred HHhcCCCEEEEcCCCCCCC
Confidence 7999999986665444
No 438
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=76.29 E-value=7.2 Score=34.89 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=60.4
Q ss_pred ccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCC------CEEEEecCCcccCCCCc
Q 023442 17 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT------RHFIIHSRKALLNGISP 90 (282)
Q Consensus 17 yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv------~~i~VH~Rt~~~~G~~~ 90 (282)
.||..+++.+++. ++. .+++||.+|.-...+ .+|+...+. .+.+.|. +.|++--|+-.| +.
T Consensus 113 IgA~~~~n~~LLr----~~a-~~gkPVilK~G~~~t----~~e~~~ave-~i~~~Gn~~~~~~~~i~L~erg~~y-~~-- 179 (288)
T 3tml_A 113 TPAFLCRQTDFIH----ACA-RSGKPVNIKKGQFLA----PHDMKNVID-KARDAAREAGLSEDRFMACERGVSF-GY-- 179 (288)
T ss_dssp ECGGGTTCHHHHH----HHH-TSSSCEEEECCTTCC----TTHHHHHHH-HHHHHHHTTTCCSCCEEEEECCEEC-SS--
T ss_pred ECcccccCHHHHH----HHH-ccCCcEEEeCCCCCC----HHHHHHHHH-HHHHcCCCccCCCCcEEEEeCCCCC-CC--
Confidence 5888999999744 433 458999999643212 223333333 3456676 556554443333 21
Q ss_pred CCcCCCCCccHHHHHHHHhcCCCceEEEc---------------cCCCC--HHHHHHHHHcCCCEEEecHH
Q 023442 91 AENRTIPPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 91 ad~~~i~~~~~~~i~~l~~~~~~ipVi~n---------------GdI~s--~eda~~~l~~g~DgVmIGRg 144 (282)
++ . -+++..+..++ + .++||+.. ||-.. +.-+..+...||||+||=+-
T Consensus 180 -~~-~--~vdl~~i~~lk-~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H 244 (288)
T 3tml_A 180 -NN-L--VSDMRSLAIMR-E-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETH 244 (288)
T ss_dssp -SC-E--ECCHHHHHHGG-G-GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEE
T ss_pred -Cc-C--cCCHHHHHHHH-h-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeec
Confidence 11 0 12466665554 4 48999873 23222 22344555589999998654
No 439
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=76.06 E-value=19 Score=33.54 Aligned_cols=96 Identities=15% Similarity=0.193 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.++++++++ ++.+.+...-+|+. .+..++ .+.+++.++.+|. +. +++-+|+
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~~~~~----~~Ai~~-~~~l~~~~i~~iE--------qP--------l~~~d~~ 263 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWMSQDV----NYATKL-AHACAPFNLKWIE--------EC--------LPPQQYE 263 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHH-HHHHGGGTCCEEE--------CC--------SCTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCH----HHHHHH-HHHHhhcCCceEe--------CC--------CCcchHH
Confidence 344456677777765 46666666555642 333443 3456776666552 11 1222477
Q ss_pred HHHHHHhcCC-CceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 103 YYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 103 ~i~~l~~~~~-~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
...++.+... .+||.+.=.+.|..++.++++.+||.|.+
T Consensus 264 ~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~i 303 (415)
T 2p3z_A 264 GYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQP 303 (415)
T ss_dssp HHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTTCSEECC
T ss_pred HHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEe
Confidence 7777776543 28987777789999999999944997754
No 440
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=76.04 E-value=2.4 Score=37.17 Aligned_cols=36 Identities=17% Similarity=0.396 Sum_probs=32.1
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+++|++.|+|.. +++.+++. .++||+.||++.+. ..
T Consensus 203 ~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~-~~ 239 (248)
T 1o5x_A 203 QIRILYGGSVNT-ENCSSLIQQEDIDGFLVGNASLK-ES 239 (248)
T ss_dssp HSEEEECSCCCT-TTHHHHHTSTTCCEEEECGGGGS-TT
T ss_pred cceEEEcCCCCH-HHHHHHHcCCCCCeeEeeHHHHH-HH
Confidence 589999999954 59999998 99999999999998 76
No 441
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=76.04 E-value=2.8 Score=36.92 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=32.5
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchh
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLG 154 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~ 154 (282)
+++|++.|.|. ++++.+++. .++||+.||++.| +|. |..
T Consensus 208 ~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGgAsL-~a~-F~~ 247 (257)
T 2yc6_A 208 HIRIIYGGSAN-GSNNEKLGQCPNIDGFLVGGASL-KPE-FMT 247 (257)
T ss_dssp TCEEEEESSCC-TTTHHHHHTSTTCCEEEESGGGG-STH-HHH
T ss_pred cceEEEcCccC-HHHHHHHHcCCCCCeeeecHHHH-HHH-HHH
Confidence 68999999995 559999998 7999999997776 566 743
No 442
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=75.88 E-value=26 Score=31.38 Aligned_cols=44 Identities=14% Similarity=0.275 Sum_probs=33.4
Q ss_pred CCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHc-CCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~-g~DgVmI 141 (282)
++-+++...++.+. .++||.+.=.+.+..|+.++++. .+|.+.+
T Consensus 200 ~~~d~~~~~~l~~~-~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 200 PPDQWQALLSLAQT-VTTAIALDESVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp CTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 44457777777765 47999888889999999999995 4665554
No 443
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=75.78 E-value=15 Score=27.44 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=42.2
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHh--cCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~--~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
.+.+...|.|.+-....... .++.+..+.+ ..+.+|||.-.+-.+.+.+.++++.|+++++
T Consensus 46 ~l~~~~~dlii~D~~l~~~~-------------g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l 108 (144)
T 3kht_A 46 QVQQAKYDLIILDIGLPIAN-------------GFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVV 108 (144)
T ss_dssp HHTTCCCSEEEECTTCGGGC-------------HHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEE
T ss_pred HhhcCCCCEEEEeCCCCCCC-------------HHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 34566677777754322111 1566666665 3468999988888899999999999999763
No 444
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=75.78 E-value=6.8 Score=34.34 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=66.6
Q ss_pred ccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCC-CCC----CCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCC
Q 023442 13 GHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG-VDD----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNG 87 (282)
Q Consensus 13 ~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G-~d~----~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G 87 (282)
|=| +|++.+...+.+.+.++-.++. +++|+.. | |-+ ...+++. .+.+++.|.+.|.|+..+-.
T Consensus 43 Kfg-~Gt~~l~~~~~l~eki~l~~~~-gV~v~~G---GTl~E~~~~qg~~~~y----l~~~k~lGf~~iEiS~G~i~--- 110 (251)
T 1qwg_A 43 KFG-WGTSAVIDRDVVKEKINYYKDW-GIKVYPG---GTLFEYAYSKGKFDEF----LNECEKLGFEAVEISDGSSD--- 110 (251)
T ss_dssp EEC-TTGGGGSCHHHHHHHHHHHHTT-TCEEEEC---HHHHHHHHHTTCHHHH----HHHHHHHTCCEEEECCSSSC---
T ss_pred Eec-CceeeecCHHHHHHHHHHHHHc-CCeEECC---cHHHHHHHHcCcHHHH----HHHHHHcCCCEEEECCCccc---
Confidence 444 5999999999999999988776 7777652 2 110 0134332 34567899999999976532
Q ss_pred CCcCCcCCCCCcc-HHHHHHHHhcCCCceEEEc--------cCCCCHHHHHHHH----HcCCCEEEe-cH
Q 023442 88 ISPAENRTIPPLK-YEYYYALLRDFPDLTFTLN--------GGINTVDEVNAAL----RKGAHHVMV-GR 143 (282)
Q Consensus 88 ~~~ad~~~i~~~~-~~~i~~l~~~~~~ipVi~n--------GdI~s~eda~~~l----~~g~DgVmI-GR 143 (282)
++.-. ..+|.++++. ...|+.. ++..++++..+.. +.||+.||| ||
T Consensus 111 --------l~~~~~~~~I~~~~~~--G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEar 170 (251)
T 1qwg_A 111 --------ISLEERNNAIKRAKDN--GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGR 170 (251)
T ss_dssp --------CCHHHHHHHHHHHHHT--TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred --------CCHHHHHHHHHHHHHC--CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 11111 3345555543 3444432 3445556655544 489999998 55
No 445
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=75.77 E-value=11 Score=33.27 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=53.4
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.++++|+|++-+-.-. |...+...
T Consensus 46 GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~s~~~--- 114 (291)
T 3a5f_A 46 GEATTMTETERKETIKFVIDKVNKRIPVIAGT--GSN---NTAASIA-MSKWAESIGVDGLLVITPY--YNKTTQKG--- 114 (291)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHHH---
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--Ccc---cHHHHHH-HHHHHHhcCCCEEEEcCCC--CCCCCHHH---
Confidence 3333334555567777766654 58988765 322 2344454 4566789999999887531 11111100
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 115 ----l~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 115 ----LVKHFKAVSDA-VSTPIIIYNVPGRTGLNITPGTLKELCE 153 (291)
T ss_dssp ----HHHHC-CTGGG-CCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred ----HHHHHHHHHHh-cCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 12333344443 467764 44 44457777776654
No 446
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=75.70 E-value=1.7 Score=38.37 Aligned_cols=39 Identities=15% Similarity=0.243 Sum_probs=32.4
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccch
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTL 153 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~ 153 (282)
+++|++.|.|.. +++.+++. .++||+.||++.+. |.-|.
T Consensus 206 ~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~-a~~F~ 245 (256)
T 1aw2_A 206 NVVIQYGGSVKP-ENAAAYFAQPDIDGALVGGAALD-AKSFA 245 (256)
T ss_dssp HCEEEECSCCCT-TTHHHHTTSTTCCEEEESGGGGC-HHHHH
T ss_pred cccEEEcCCCCH-HHHHHHHcCCCCCeeeecHHHhC-hHHHH
Confidence 489999999976 99999998 79999999987764 44343
No 447
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=75.45 E-value=23 Score=31.41 Aligned_cols=95 Identities=6% Similarity=0.046 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCcc
Q 023442 23 LDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK 100 (282)
Q Consensus 23 ~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~ 100 (282)
-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ +++.+++.|+|++-+..- .|...+.. .-
T Consensus 66 Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---st~~ai~-la~~A~~~Gadavlv~~P--~y~~~~~~-------~l 130 (304)
T 3cpr_A 66 TTAAEKLELLKAVREEVGDRAKLIAGV--GTN---NTRTSVE-LAEAAASAGADGLLVVTP--YYSKPSQE-------GL 130 (304)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---CHHHHHH-HHHHHHHTTCSEEEEECC--CSSCCCHH-------HH
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEecC--CCC---CHHHHHH-HHHHHHhcCCCEEEECCC--CCCCCCHH-------HH
Confidence 34444467777766654 58888765 322 2344454 356678999999988753 22111110 11
Q ss_pred HHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 101 YEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 131 ~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 131 LAHFGAIAAA-TEVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp HHHHHHHHHH-CCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHHHHh-cCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 4556677665 478875 45 44458888887765
No 448
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=75.43 E-value=6.2 Score=35.45 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=45.2
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcC-CCceEEE-ccCCCCHHHHHHHHH----cCC-CEE
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAALR----KGA-HHV 139 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~-nGdI~s~eda~~~l~----~g~-DgV 139 (282)
.+.+.|++.|.+-|-|+.....+..+ +.+.+...++.. .++|||+ .|.. |.+++.++.+ .|+ |+|
T Consensus 36 ~li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~grvpViaGvg~~-~t~~ai~la~~A~~~Ga~dav 107 (311)
T 3h5d_A 36 HLLAHHTDGILLAGTTAESPTLTHDE-------ELELFAAVQKVVNGRVPLIAGVGTN-DTRDSIEFVKEVAEFGGFAAG 107 (311)
T ss_dssp HHHHTTCCCEEESSTTTTGGGSCHHH-------HHHHHHHHHHHSCSSSCEEEECCCS-SHHHHHHHHHHHHHSCCCSEE
T ss_pred HHHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCc-CHHHHHHHHHHHHhcCCCcEE
Confidence 44579999999999775433332111 122333333332 3688875 4554 5555555443 586 999
Q ss_pred EecHHhhhCCc
Q 023442 140 MVGRAAYQNPW 150 (282)
Q Consensus 140 mIGRgal~nP~ 150 (282)
|+.-..+..|.
T Consensus 108 lv~~P~y~~~s 118 (311)
T 3h5d_A 108 LAIVPYYNKPS 118 (311)
T ss_dssp EEECCCSSCCC
T ss_pred EEcCCCCCCCC
Confidence 99977776664
No 449
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=75.27 E-value=38 Score=30.02 Aligned_cols=101 Identities=15% Similarity=0.074 Sum_probs=59.9
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-CCcCCcC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENR 94 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G-~~~ad~~ 94 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.++++|+|++-+..-. .++. .+..
T Consensus 59 GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P~-y~~~~~s~~--- 128 (307)
T 3s5o_A 59 GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS--GCE---STQATVE-MTVSMAQVGADAAMVVTPC-YYRGRMSSA--- 128 (307)
T ss_dssp GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC-TTGGGCCHH---
T ss_pred cchhhCCHHHHHHHHHHHHHHcCCCCcEEEec--CCC---CHHHHHH-HHHHHHHcCCCEEEEcCCC-cCCCCCCHH---
Confidence 4333345555577888887766 58888754 332 2344454 3567789999999987522 1111 1110
Q ss_pred CCCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 129 ----~l~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 129 ----ALIHHYTKVADL-SPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp ----HHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred ----HHHHHHHHHHhh-cCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 115566677665 478875 44 43458888887766
No 450
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=75.20 E-value=13 Score=27.32 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=42.5
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEE
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 139 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgV 139 (282)
+++...|.|.+........ .++.+..+.+..+.+|||.-.+-.+.+...++++.|++++
T Consensus 47 l~~~~~dlvi~d~~l~~~~-------------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 105 (137)
T 3hdg_A 47 FGLHAPDVIITDIRMPKLG-------------GLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLF 105 (137)
T ss_dssp HHHHCCSEEEECSSCSSSC-------------HHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEE
T ss_pred HhccCCCEEEEeCCCCCCC-------------HHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCccee
Confidence 3445678887765321111 1667777777667899999888889999999999898875
No 451
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=75.10 E-value=3.3 Score=36.16 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=32.5
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+++|++.|.| +++.+.+++. ..+||+.||++.|. ..
T Consensus 199 ~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~ 235 (244)
T 2v5b_A 199 QLRILYGGSV-TAKNARTLYQMRDINGFLVGGASLK-PE 235 (244)
T ss_dssp HCEEEECSCC-CHHHHHHHHTSTTCCEEEESGGGSS-TT
T ss_pred cccEEEcCCC-CHhHHHHHhcCCCCCeeeechHHHH-HH
Confidence 4899999998 8999999998 89999999999998 65
No 452
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=74.97 E-value=30 Score=30.93 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=57.3
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+|++-+-.-. |...+..
T Consensus 67 GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---st~~ai~-la~~A~~~Gadavlv~~P~--y~~~~~~---- 134 (315)
T 3si9_A 67 GESPTLTHEEHKRIIELCVEQVAKRVPVVAGA--GSN---STSEAVE-LAKHAEKAGADAVLVVTPY--YNRPNQR---- 134 (315)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCHH----
T ss_pred cCccccCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 3333334554466777766654 58888854 322 2345454 3567789999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 135 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 135 ---GLYTHFSSIAKA-ISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHc-CCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 114556666665 477774 44 55557777777765
No 453
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=74.69 E-value=40 Score=30.00 Aligned_cols=100 Identities=15% Similarity=0.025 Sum_probs=60.3
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCC-CEEEEecCCcccCCCCcCCcC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv-~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+ |++-+..-. |...+..
T Consensus 52 GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv--g~~---~t~~ai~-la~~A~~~Ga~davlv~~P~--y~~~s~~--- 120 (311)
T 3h5d_A 52 AESPTLTHDEELELFAAVQKVVNGRVPLIAGV--GTN---DTRDSIE-FVKEVAEFGGFAAGLAIVPY--YNKPSQE--- 120 (311)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC--CCS---SHHHHHH-HHHHHHHSCCCSEEEEECCC--SSCCCHH---
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CHHHHHH-HHHHHHhcCCCcEEEEcCCC--CCCCCHH---
Confidence 4333335555577888877766 58998864 322 2345554 3566788886 999887532 1111110
Q ss_pred CCCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 121 ----~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 121 ----GMYQHFKAIADA-SDLPIIIYNIPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp ----HHHHHHHHHHHS-CSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred ----HHHHHHHHHHHh-CCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 114566677664 478875 45 65568888888776
No 454
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=74.66 E-value=20 Score=27.06 Aligned_cols=62 Identities=6% Similarity=-0.147 Sum_probs=43.7
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
.+.+...+.|.+........ .++.+..+.+..+.+|||.-.+-.+.+...++++.|+++++.
T Consensus 46 ~l~~~~~dlii~D~~l~~~~-------------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 107 (153)
T 3cz5_A 46 LYRETTPDIVVMDLTLPGPG-------------GIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVT 107 (153)
T ss_dssp HHHTTCCSEEEECSCCSSSC-------------HHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEE
T ss_pred HHhcCCCCEEEEecCCCCCC-------------HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEe
Confidence 34566688888765432111 156667776666789998888878889999999999998754
No 455
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=74.65 E-value=20 Score=32.93 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=35.7
Q ss_pred CCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEec
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIG 142 (282)
+++-+++...++.+. .++||.+.=.+.|..|+.++++ ..+|.|.+=
T Consensus 224 ~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k 270 (388)
T 3qld_A 224 LPEDDWFDLAKLQAS-LRTPVCLDESVRSVRELKLTARLGAARVLNVK 270 (388)
T ss_dssp SCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 344457777777765 5799998888999999999998 568887663
No 456
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=74.63 E-value=20 Score=31.61 Aligned_cols=94 Identities=10% Similarity=0.021 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+|++-+..-. |...+. ..-+
T Consensus 53 t~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~~~-------~~l~ 117 (292)
T 3daq_A 53 TTDEKELILKTVIDLVDKRVPVIAGT--GTN---DTEKSIQ-ASIQAKALGADAIMLITPY--YNKTNQ-------RGLV 117 (292)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---CHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCH-------HHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeC--Ccc---cHHHHHH-HHHHHHHcCCCEEEECCCC--CCCCCH-------HHHH
Confidence 4444456666666654 58998864 322 2344454 3566788999999887531 111111 0114
Q ss_pred HHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 102 EYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
+++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 118 ~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 118 KHFEAIADA-VKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHH-HCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHh-CCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 556666664 378875 44 65568888887776
No 457
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=74.53 E-value=19 Score=31.69 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=58.8
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+.+ |-. +..+.++ .++.++++|+|++-+-.-. |...+..
T Consensus 46 GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~s~~---- 113 (292)
T 2ojp_A 46 GESATLNHDEHADVVMMTLDLADGRIPVIAGT--GAN---ATAEAIS-LTQRFNDSGIVGCLTVTPY--YNRPSQE---- 113 (292)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHTTTSSCSEEEEECCC--SSCCCHH----
T ss_pred cchhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCc---cHHHHHH-HHHHHHhcCCCEEEECCCC--CCCCCHH----
Confidence 3333335555567777766654 58888765 322 2344444 4566789999999887532 2111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
--++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 114 ---~l~~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 114 ---GLYQHFKAIAEH-TDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp ---HHHHHHHHHHTT-CSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred ---HHHHHHHHHHHh-cCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 114566677664 578875 45 44458888888765
No 458
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=74.47 E-value=23 Score=32.14 Aligned_cols=44 Identities=9% Similarity=-0.062 Sum_probs=33.3
Q ss_pred CCccHHHHHHHHhcCCC-ceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 97 PPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 97 ~~~~~~~i~~l~~~~~~-ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
++-+|+...++.+.... +||.+.=.+.|..|+.++ ...+|.|.+
T Consensus 225 ~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~d~i~i 269 (372)
T 3cyj_A 225 SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCVDILQA 269 (372)
T ss_dssp CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTCSEEEE
T ss_pred CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCCCEEec
Confidence 33357777777765432 799988889999999998 767888876
No 459
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=74.30 E-value=8.4 Score=34.38 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=50.8
Q ss_pred HHHHhCCCCEEEEecCCc--ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCC-CHHHHHHHHHcCCCEEEec
Q 023442 66 KVSSLSPTRHFIIHSRKA--LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~--~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~-s~eda~~~l~~g~DgVmIG 142 (282)
+.+++.|+|.|.+.-.|. .|+|. |.++++.+.++.+. .++|++.-|+=- +.++++++++.|+-=|=|+
T Consensus 162 ~Fv~~TgvD~LAvaiGt~HG~Y~~~--------p~Ld~~~L~~I~~~-~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 162 RFVELTGVDSLAVAIGTAHGLYSKT--------PKIDFQRLAEIREV-VDVPLVLHGASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp HHHHHHCCSEEEECSSCCSSCCSSC--------CCCCHHHHHHHHHH-CCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred HHHHHHCCCEEEeecCccccCcCCC--------CccCHHHHHHHHHh-cCCCEEEECCCCCCHHHHHHHHHCCCeEEEEC
Confidence 345678999999875552 34432 45778988888765 589999888644 6667888888887777776
Q ss_pred HHh
Q 023442 143 RAA 145 (282)
Q Consensus 143 Rga 145 (282)
..+
T Consensus 233 Tdl 235 (286)
T 1gvf_A 233 TEL 235 (286)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 460
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=74.13 E-value=23 Score=36.84 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=57.5
Q ss_pred HHHHHHhhcC-CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccC---CCCcCCcCCCCCccHHHHH
Q 023442 30 EAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLN---GISPAENRTIPPLKYEYYY 105 (282)
Q Consensus 30 eiv~~v~~~~-~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~---G~~~ad~~~i~~~~~~~i~ 105 (282)
+-++.+++.. +.|+.+=+-.|.+ .+++.+ +++.++++|+|.|.+|.-..... +.+ .....-+..-++.+.
T Consensus 623 ~~i~~~~~~~~~~~~i~~i~~g~~----~~~~~~-~a~~~~~~g~d~iein~~~P~~~~~~~~G-~~~~~~~~~~~~iv~ 696 (1025)
T 1gte_A 623 QSVTELKADFPDNIVIASIMCSYN----KNDWME-LSRKAEASGADALELNLSCPHGMGERGMG-LACGQDPELVRNICR 696 (1025)
T ss_dssp HHHHHHHHHCTTSEEEEEECCCSC----HHHHHH-HHHHHHHTTCSEEEEECCCBCCCC------SBGGGCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEecCCCC----HHHHHH-HHHHHHhcCCCEEEEECCCCCCCCCCCcc-cccccCHHHHHHHHH
Confidence 3345556544 5788776543432 223333 45567789999999995321111 110 000000111234455
Q ss_pred HHHhcCCCceEE--EccCCCCHHHHHHHHH-cCCCEEEe
Q 023442 106 ALLRDFPDLTFT--LNGGINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 106 ~l~~~~~~ipVi--~nGdI~s~eda~~~l~-~g~DgVmI 141 (282)
.+.+. .++||+ ...++.+..++.+.++ .|+|+|.+
T Consensus 697 ~v~~~-~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 697 WVRQA-VQIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp HHHHH-CSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred HHHHh-hCCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 55443 478887 4677777666555555 99999988
No 461
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=74.05 E-value=17 Score=33.34 Aligned_cols=39 Identities=0% Similarity=-0.146 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEE
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVM 140 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVm 140 (282)
++..+++.+. .++||.+.=.+.|.+|+.++++ ..+|.|.
T Consensus 250 ~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ 289 (388)
T 4h83_A 250 KRSMRDVRYQ-GSVPVCAGQTEFSASGCRDLMETGAIDVCN 289 (388)
T ss_dssp HHHHHHHHHH-SSSCEEECTTCSSHHHHHHHHHHTCCSEEC
T ss_pred hHHHHHHHhh-cCCCccCCccccChHhHHHHHHcCCCCeEe
Confidence 4445566554 5899999889999999999998 5688763
No 462
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=73.57 E-value=25 Score=25.98 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=41.7
Q ss_pred hCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 70 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 70 ~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
....|.|.+........ .++.+..+.+..+.+|||.-.+-.+.+.+.++++.|+++++
T Consensus 47 ~~~~dlvi~d~~l~~~~-------------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 104 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLS-------------GMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYL 104 (143)
T ss_dssp TTTCCEEEEESCCSSSC-------------HHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCCCCc-------------HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeE
Confidence 45688888765432111 15666677666678999988888899999999999998763
No 463
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=73.53 E-value=5.6 Score=35.15 Aligned_cols=54 Identities=7% Similarity=-0.047 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCC
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGA 136 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~ 136 (282)
.+++++. ++.++++|++.|.+.+-+ -+...++.++ .++|+|+-|.= .+|
T Consensus 160 a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~-l~iP~igIGag-----------~~~ 208 (264)
T 1m3u_A 160 GDQLLSD-ALALEAAGAQLLVLECVP------------------VELAKRITEA-LAIPVIGIGAG-----------NVT 208 (264)
T ss_dssp HHHHHHH-HHHHHHHTCCEEEEESCC------------------HHHHHHHHHH-CSSCEEEESSC-----------TTS
T ss_pred HHHHHHH-HHHHHHCCCcEEEEecCC------------------HHHHHHHHHh-CCCCEEEeCCC-----------CCC
Confidence 3455554 567889999999998732 1334456555 47999875532 468
Q ss_pred CEEEe
Q 023442 137 HHVMV 141 (282)
Q Consensus 137 DgVmI 141 (282)
||=++
T Consensus 209 dgQvL 213 (264)
T 1m3u_A 209 DGQIL 213 (264)
T ss_dssp SEEEE
T ss_pred Cccee
Confidence 87544
No 464
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=73.36 E-value=24 Score=25.81 Aligned_cols=60 Identities=10% Similarity=0.072 Sum_probs=41.9
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHh--cCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~--~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
+.+...+.+.+........ .++.+..+.+ ..+.+|||.-.+-.+.+...++++.|+++++
T Consensus 50 l~~~~~dlii~d~~l~~~~-------------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 111 (143)
T 3cnb_A 50 LHTVKPDVVMLDLMMVGMD-------------GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCF 111 (143)
T ss_dssp HHHTCCSEEEEETTCTTSC-------------HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCEEEEecccCCCc-------------HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEE
Confidence 4556688888875432111 1566666665 3468999988777888888888889999764
No 465
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=73.32 E-value=20 Score=33.36 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHH
Q 023442 25 PKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 102 (282)
Q Consensus 25 p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~ 102 (282)
++.-.+.+++|++++ ++++.|...-+|+. .+..+ +++.+++.++.+|. +- +++-+++
T Consensus 193 ~~~di~~v~avRea~G~~~~L~vDaN~~w~~----~~A~~-~~~~Le~~~l~~iE--------eP--------~~~~d~~ 251 (404)
T 3ekg_A 193 LKKNLEELATMRERVGPDFWLMFDCWMSLDL----NYATR-LARGAREYGLKWIE--------EA--------LPPDDYW 251 (404)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHGGGTCCEEE--------CC--------SCTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEecCCCCCCH----HHHHH-HHHHHhhcCCcEEe--------cC--------CCcccHH
Confidence 345566778888876 57788887777753 23233 45567777777662 11 1222366
Q ss_pred HHHHHHhcCCCceE-EEcc-CCCCHHHHHHHHH-cCCCEEE
Q 023442 103 YYYALLRDFPDLTF-TLNG-GINTVDEVNAALR-KGAHHVM 140 (282)
Q Consensus 103 ~i~~l~~~~~~ipV-i~nG-dI~s~eda~~~l~-~g~DgVm 140 (282)
..+++.+. .++|| |+.| .+.|..++.++++ ..+|.|.
T Consensus 252 ~~a~l~~~-~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~ 291 (404)
T 3ekg_A 252 GYAELRRN-APTGMMVTTGEHEATRWGFRMLLEMGCCDIIQ 291 (404)
T ss_dssp HHHHHHHH-SCTTCEEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHHHHh-cCCCeEEEecCccCCHHHHHHHHHcCCCCeEe
Confidence 67777665 35553 3444 5889999999998 5578664
No 466
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=73.20 E-value=37 Score=28.24 Aligned_cols=77 Identities=21% Similarity=0.183 Sum_probs=50.0
Q ss_pred cEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccC
Q 023442 42 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 121 (282)
Q Consensus 42 pvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGd 121 (282)
|+..=+|. ++.++..+++ +.+.+.|++.|.+.-++.. ..+.+..+ ++ +++.+ +.|-
T Consensus 14 ~ii~vi~~--~~~~~~~~~~----~~l~~gGv~~iel~~k~~~---------------~~~~i~~~-~~-~~~~~-gag~ 69 (207)
T 2yw3_A 14 RLLPLLTV--RGGEDLLGLA----RVLEEEGVGALEITLRTEK---------------GLEALKAL-RK-SGLLL-GAGT 69 (207)
T ss_dssp CEEEEECC--CSCCCHHHHH----HHHHHTTCCEEEEECSSTH---------------HHHHHHHH-TT-SSCEE-EEES
T ss_pred CEEEEEeC--CCHHHHHHHH----HHHHHcCCCEEEEeCCChH---------------HHHHHHHH-hC-CCCEE-EeCe
Confidence 56665664 2323444433 3456899999988754320 12344444 33 56655 5566
Q ss_pred CCCHHHHHHHHHcCCCEEEec
Q 023442 122 INTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 122 I~s~eda~~~l~~g~DgVmIG 142 (282)
+.+.+++..+++.|+|+|..+
T Consensus 70 vl~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 70 VRSPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp CCSHHHHHHHHHHTCSEEEES
T ss_pred EeeHHHHHHHHHcCCCEEEcC
Confidence 889999999999999999988
No 467
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=73.17 E-value=27 Score=30.93 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=56.1
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+- -. +..+.++ +++.++++|+|++-+-.-. |...+..
T Consensus 49 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg--~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~~~~---- 116 (300)
T 3eb2_A 49 GEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA--ST---SVADAVA-QAKLYEKLGADGILAILEA--YFPLKDA---- 116 (300)
T ss_dssp GTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE--ES---SHHHHHH-HHHHHHHHTCSEEEEEECC--SSCCCHH----
T ss_pred cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC--CC---CHHHHHH-HHHHHHHcCCCEEEEcCCC--CCCCCHH----
Confidence 4333334554566777776655 578888653 22 2344454 3566788999999887532 1111110
Q ss_pred CCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
.-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 117 ---~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 117 ---QIESYFRAIADA-VEIPVVIYTNPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp ---HHHHHHHHHHHH-CSSCEEEEECTTTCSSCCCHHHHHHHHT
T ss_pred ---HHHHHHHHHHHH-CCCCEEEEECccccCCCCCHHHHHHHHc
Confidence 014556666665 367774 44 43446777777654
No 468
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=73.12 E-value=2.7 Score=36.95 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=29.8
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+++|++.|.| +++.+.+++. .++||+.||++.|. ..
T Consensus 206 ~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~ 242 (251)
T 2vxn_A 206 KLRILYGGSV-NAANAATLYAKPDINGFLVGGASLK-PE 242 (251)
T ss_dssp HCEEEEESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TT
T ss_pred cccEEEcCCc-CHhHHHHHhcCCCCCeeeecHHHHH-HH
Confidence 4899999998 5555666665 99999999999998 76
No 469
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=72.96 E-value=14 Score=34.55 Aligned_cols=42 Identities=2% Similarity=0.123 Sum_probs=31.8
Q ss_pred cHHHHHHHHhcC-CCceEEEcc-CCCCHHHHHHHHH-cCCCEEEe
Q 023442 100 KYEYYYALLRDF-PDLTFTLNG-GINTVDEVNAALR-KGAHHVMV 141 (282)
Q Consensus 100 ~~~~i~~l~~~~-~~ipVi~nG-dI~s~eda~~~l~-~g~DgVmI 141 (282)
+|+...++.+.. .++||.+.= -++|++++.++++ ..||.|.+
T Consensus 296 d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~i 340 (431)
T 2fym_A 296 DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILI 340 (431)
T ss_dssp CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred cHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEE
Confidence 366666666542 268987665 6899999999998 66898877
No 470
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=72.78 E-value=30 Score=29.66 Aligned_cols=93 Identities=12% Similarity=0.194 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCC--CcHHHHHHHHHHHHHhCCCCEEEEecCCcc---cCCCCcCCcCCCCC
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDH--DSYNQLCDFIYKVSSLSPTRHFIIHSRKAL---LNGISPAENRTIPP 98 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~--~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~---~~G~~~ad~~~i~~ 98 (282)
|.+.+.+++++.. +.|+|. .|. +|.. .+..+.++.+. +.|++.|--||-... ..|
T Consensus 105 D~~~~~~Li~~a~---~~~vTF-HRA-FD~~~~~d~~~ale~L~----~lGv~rILTSG~~~~~~a~~g----------- 164 (224)
T 2bdq_A 105 DTEAIEQLLPATQ---GLPLVF-HMA-FDVIPKSDQKKSIDQLV----ALGFTRILLHGSSNGEPIIEN----------- 164 (224)
T ss_dssp CHHHHHHHHHHHT---TCCEEE-CGG-GGGSCTTTHHHHHHHHH----HTTCCEEEECSCSSCCCGGGG-----------
T ss_pred CHHHHHHHHHHhC---CCeEEE-ECc-hhccCCcCHHHHHHHHH----HcCCCEEECCCCCCCCcHHHH-----------
Q ss_pred ccHHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHH-cCCCEE
Q 023442 99 LKYEYYYALLRD-FPDLTFTLNGGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 99 ~~~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~-~g~DgV 139 (282)
.+.++++++. ...|-|...||| +.+.+.++++ +|++.+
T Consensus 165 --~~~L~~Lv~~a~~ri~Im~GgGV-~~~Ni~~l~~~tGv~e~ 204 (224)
T 2bdq_A 165 --IKHIKALVEYANNRIEIMVGGGV-TAENYQYICQETGVKQA 204 (224)
T ss_dssp --HHHHHHHHHHHTTSSEEEECSSC-CTTTHHHHHHHHTCCEE
T ss_pred --HHHHHHHHHhhCCCeEEEeCCCC-CHHHHHHHHHhhCCCEE
No 471
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=72.63 E-value=39 Score=30.95 Aligned_cols=107 Identities=12% Similarity=0.126 Sum_probs=63.9
Q ss_pred ccCCchhhcccCcccccccCCHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCc
Q 023442 4 CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA 83 (282)
Q Consensus 4 ~GCP~~~v~~~g~yGs~Ll~~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~ 83 (282)
+|+|.=|| ||.=++|..++.++-+ .++||.+|. |.. +++|+... +..+.+.|.+.+.+|+-+
T Consensus 110 ~~v~~~KI------~S~~~~N~pLL~~va~-----~gKPviLst--Gms---tl~Ei~~A-ve~i~~~g~~viLlhC~s- 171 (350)
T 3g8r_A 110 HGIEIIKI------ASCSFTDWPLLERIAR-----SDKPVVAST--AGA---RREDIDKV-VSFMLHRGKDLTIMHCVA- 171 (350)
T ss_dssp TTCCEEEE------CSSSTTCHHHHHHHHT-----SCSCEEEEC--TTC---CHHHHHHH-HHHHHTTTCCEEEEECCC-
T ss_pred cCCCEEEE------CcccccCHHHHHHHHh-----hCCcEEEEC--CCC---CHHHHHHH-HHHHHHcCCCEEEEecCC-
Confidence 45665333 5667899988666543 489999986 442 45565443 445667788877778633
Q ss_pred ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEc----cCCCCHHHHHHHHHcCCC
Q 023442 84 LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINTVDEVNAALRKGAH 137 (282)
Q Consensus 84 ~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~n----GdI~s~eda~~~l~~g~D 137 (282)
.| ..+. ..+++..+..+.+.++++||..+ |+.. .-+..+...||+
T Consensus 172 ~Y--Pt~~-----~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~--~~~~AAvAlGA~ 220 (350)
T 3g8r_A 172 EY--PTPD-----DHLHLARIKTLRQQYAGVRIGYSTHEDPDLM--EPIMLAVAQGAT 220 (350)
T ss_dssp CS--SCCG-----GGCCTTHHHHHHHHCTTSEEEEEECCCSSCC--HHHHHHHHTTCC
T ss_pred CC--CCCc-----ccCCHHHHHHHHHHCCCCCEEcCCCCCCCcc--HHHHHHHHcCCC
Confidence 12 2111 12356667777777778999766 4432 222344456775
No 472
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=72.48 E-value=24 Score=31.42 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
|.+.+.++++.... .+||. .|. +|...+..+.++.+. +.|++.|-.|| +..+..++ .+.
T Consensus 140 D~~~~~~Li~~a~~---l~vTF-HRA-FD~~~d~~~Ale~Li----~lGvdrILTSG-----~~~~a~~G-------l~~ 198 (287)
T 3iwp_A 140 DKELCMSLMAICRP---LPVTF-HRA-FDMVHDPMAALETLL----TLGFERVLTSG-----CDSSALEG-------LPL 198 (287)
T ss_dssp CHHHHHHHHHHHTT---SCEEE-CGG-GGGCSCHHHHHHHHH----HHTCSEEEECT-----TSSSTTTT-------HHH
T ss_pred CHHHHHHHHHHcCC---CcEEE-ECc-hhccCCHHHHHHHHH----HcCCCEEECCC-----CCCChHHh-------HHH
Q ss_pred HHHHHhc-CCCceEEEccCCCCHHHHHHHHH-cCCCEE
Q 023442 104 YYALLRD-FPDLTFTLNGGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 104 i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~-~g~DgV 139 (282)
++++++. ...|+|.+.||| +.+.+.++++ +|++.+
T Consensus 199 Lk~Lv~~a~~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 199 IKRLIEQAKGRIVVMPGGGI-TDRNLQRILEGSGATEF 235 (287)
T ss_dssp HHHHHHHHTTSSEEEECTTC-CTTTHHHHHHHHCCSEE
T ss_pred HHHHHHHhCCCCEEEECCCc-CHHHHHHHHHhhCCCEE
No 473
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=72.46 E-value=3 Score=36.58 Aligned_cols=36 Identities=19% Similarity=0.418 Sum_probs=31.7
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCc
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~ 150 (282)
+++|++.|.|.. +++.+++. .++||+.||++.|. ..
T Consensus 205 ~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~-~~ 241 (250)
T 2j27_A 205 ELRILYGGSVNG-KNARTLYQQRDVNGFLVGGASLK-PE 241 (250)
T ss_dssp HCCEEEESSCCT-TTHHHHHTSTTCCEEEESGGGGS-TT
T ss_pred cccEEEcCCCCH-HHHHHHHcCCCCCeeeeehHHHH-HH
Confidence 489999999954 59999997 99999999999998 66
No 474
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=72.44 E-value=25 Score=30.94 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccH
Q 023442 24 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 101 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~ 101 (282)
..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ .++.+++.|+|++-+..-. |...+.. --+
T Consensus 52 s~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~~~~-------~l~ 116 (291)
T 3tak_A 52 SMEEHTQVIKEIIRVANKRIPIIAGT--GAN---STREAIE-LTKAAKDLGADAALLVTPY--YNKPTQE-------GLY 116 (291)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHHHHHTCSEEEEECCC--SSCCCHH-------HHH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeC--CCC---CHHHHHH-HHHHHHhcCCCEEEEcCCC--CCCCCHH-------HHH
Confidence 4454467777776655 58888854 322 2345454 3566789999999887532 1111110 115
Q ss_pred HHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH-cCCCEE
Q 023442 102 EYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR-KGAHHV 139 (282)
Q Consensus 102 ~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~-~g~DgV 139 (282)
+++.++++. .++||+ +| |--.+++.+.++.+ ..+-||
T Consensus 117 ~~f~~ia~a-~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 160 (291)
T 3tak_A 117 QHYKAIAEA-VELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGI 160 (291)
T ss_dssp HHHHHHHHH-CCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEE
T ss_pred HHHHHHHHh-cCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEE
Confidence 566677765 478885 44 55568888877765 333333
No 475
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=72.44 E-value=43 Score=29.59 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=58.8
Q ss_pred cccccCCHHHHHHHHHHHhhcC---CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENR 94 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~---~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~ 94 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.+++.|+|++-+..-. |...+.
T Consensus 52 GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv--g~~---~t~~ai~-la~~a~~~Gadavlv~~P~--y~~~s~---- 119 (301)
T 3m5v_A 52 GESATLTHEEHRTCIEIAVETCKGTKVKVLAGA--GSN---ATHEAVG-LAKFAKEHGADGILSVAPY--YNKPTQ---- 119 (301)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEEECCC--SSCCCH----
T ss_pred cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC--CCC---CHHHHHH-HHHHHHHcCCCEEEEcCCC--CCCCCH----
Confidence 3333334555566777766654 47888864 322 2345554 3567789999999987532 111111
Q ss_pred CCCCccHHHHHHHHhcCCCceEE-Ec-----cCCCCHHHHHHHHH
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFT-LN-----GGINTVDEVNAALR 133 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi-~n-----GdI~s~eda~~~l~ 133 (282)
..-++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 120 ---~~l~~~f~~va~a-~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 120 ---QGLYEHYKAIAQS-VDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp ---HHHHHHHHHHHHH-CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHh-CCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 0114566677665 478875 44 55568888877765
No 476
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=72.27 E-value=26 Score=25.64 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=41.2
Q ss_pred HHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 68 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 68 le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
+.+...+.+.+.-......| ++.+..+.+..+.+|||.-.+-.+.+.+.++++.|+++++
T Consensus 43 ~~~~~~dlvl~D~~l~~~~g-------------~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 102 (132)
T 3crn_A 43 IENEFFNLALFXIKLPDMEG-------------TELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYI 102 (132)
T ss_dssp HHHSCCSEEEECSBCSSSBH-------------HHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HhcCCCCEEEEecCCCCCch-------------HHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhc
Confidence 34566787777643211111 5666666655678999888777888888888889998764
No 477
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.27 E-value=42 Score=29.80 Aligned_cols=102 Identities=11% Similarity=0.044 Sum_probs=59.5
Q ss_pred cccccCCHHHHHHHHHHHhhcC--CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-CCcCCcC
Q 023442 18 GVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENR 94 (282)
Q Consensus 18 Gs~Ll~~p~~~~eiv~~v~~~~--~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G-~~~ad~~ 94 (282)
|-+..-..+.-.++++.+.+.+ ++||.+-+ |-. +..+.++ +++.++++|+|++-+..- .|.. ..+.+
T Consensus 53 GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ai~-la~~A~~~Gadavlv~~P--yy~~~~~~s~-- 122 (309)
T 3fkr_A 53 SEQFAITDDERDVLTRTILEHVAGRVPVIVTT--SHY---STQVCAA-RSLRAQQLGAAMVMAMPP--YHGATFRVPE-- 122 (309)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHHHHHH-HHHHHHHTTCSEEEECCS--CBTTTBCCCH--
T ss_pred cCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--CCc---hHHHHHH-HHHHHHHcCCCEEEEcCC--CCccCCCCCH--
Confidence 4333334555567777776654 58998875 322 2344454 456778999999988752 2210 01111
Q ss_pred CCCCccHHHHHHHHhcCCCceEE-Ec----cCCCCHHHHHHHHH
Q 023442 95 TIPPLKYEYYYALLRDFPDLTFT-LN----GGINTVDEVNAALR 133 (282)
Q Consensus 95 ~i~~~~~~~i~~l~~~~~~ipVi-~n----GdI~s~eda~~~l~ 133 (282)
.--++++.++++. .++||+ +| |--.+++.+.++.+
T Consensus 123 ---~~l~~~f~~va~a-~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 123 ---AQIFEFYARVSDA-IAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp ---HHHHHHHHHHHHH-CSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHh-cCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 0114566677665 478875 44 55568888888873
No 478
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=72.24 E-value=2.4 Score=35.98 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=45.7
Q ss_pred CCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCC
Q 023442 71 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 149 (282)
Q Consensus 71 ~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP 149 (282)
..+|++.+.+....+.|.+. ..+|+.+..+. ..+.|++..||| |++.+.++++ .+++||=+..|.=..|
T Consensus 118 ~~~d~~LlD~~~~~~GGtG~-------~fdw~~l~~~~--~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~p 187 (205)
T 1nsj_A 118 YREFPILLDTKTPEYGGSGK-------TFDWSLILPYR--DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFP 187 (205)
T ss_dssp GTTSCEEEEESCSSSSSCCS-------CCCGGGTGGGG--GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEET
T ss_pred cCCCEEEECCCCCCCCCCCC-------ccCHHHHHhhh--cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCC
Confidence 34888888764432333321 12354432221 126799999999 8899988887 7999999998886555
Q ss_pred c
Q 023442 150 W 150 (282)
Q Consensus 150 ~ 150 (282)
-
T Consensus 188 G 188 (205)
T 1nsj_A 188 G 188 (205)
T ss_dssp T
T ss_pred C
Confidence 4
No 479
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=72.21 E-value=35 Score=32.27 Aligned_cols=100 Identities=6% Similarity=0.182 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhhc---C--CccEEEEecCC--CCC------------CCcHHHHHHHHHHHHHhCCCCEEEEecCCcccC
Q 023442 26 KFVGEAMSVIAAN---T--NVPVSVKCRIG--VDD------------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLN 86 (282)
Q Consensus 26 ~~~~eiv~~v~~~---~--~ipvsvKiR~G--~d~------------~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~ 86 (282)
+.+..+.++|+++ + ++.+.+..-.+ |+. .-+..+.++++.+++++.++.+|. +
T Consensus 241 e~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~i~~IE--------d 312 (449)
T 3uj2_A 241 EAIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPIVSIE--------D 312 (449)
T ss_dssp HHHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSCEEEEE--------S
T ss_pred HHHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcCceEEE--------C
Confidence 3444444888887 6 45666655211 221 013456666666667888765552 1
Q ss_pred CCCcCCcCCCCCccHHHHHHHHhcC-CCceEEEccCCC--CHHHHHHHHH-cCCCEEEec
Q 023442 87 GISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGIN--TVDEVNAALR-KGAHHVMVG 142 (282)
Q Consensus 87 G~~~ad~~~i~~~~~~~i~~l~~~~-~~ipVi~nGdI~--s~eda~~~l~-~g~DgVmIG 142 (282)
.. ++-+|+...++.+.. ..+||++ ++.. |++++.++++ ..||.|.+=
T Consensus 313 Pl--------~~dD~eg~~~L~~~~~~~ipI~g-DE~~~tn~~~~~~~i~~~a~d~i~iK 363 (449)
T 3uj2_A 313 GL--------DEEDWEGWQYMTRELGDKIQLVG-DDLFVTNTERLNKGIKERCGNSILIK 363 (449)
T ss_dssp CS--------CTTCHHHHHHHHHHHTTTSEEEE-STTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred CC--------CcchHHHHHHHHHHhCCCceEEC-CcceeCCHHHHHHHHHcCCCCEEEEC
Confidence 22 122367666666543 2577764 4443 6999999998 668888653
No 480
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=72.08 E-value=13 Score=33.48 Aligned_cols=43 Identities=21% Similarity=0.253 Sum_probs=28.7
Q ss_pred HHHHHhcCCCceEEEccCCC--CHHHHHHHH----H-cCCCEEEecHHhhh
Q 023442 104 YYALLRDFPDLTFTLNGGIN--TVDEVNAAL----R-KGAHHVMVGRAAYQ 147 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~--s~eda~~~l----~-~g~DgVmIGRgal~ 147 (282)
+.++.+.. .+||+..||=. +.+++.+.. + .|+.||.+||-++.
T Consensus 229 f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 229 MERVMEST-TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp HHHHGGGC-SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred HHHHHHhC-CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 45666653 68886655544 455655544 4 59999999998876
No 481
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=71.82 E-value=24 Score=25.88 Aligned_cols=59 Identities=5% Similarity=0.010 Sum_probs=40.7
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
.+...|.+.+--.-.... .++.+..+.+..+++|||.-.+-.+.+.+.++++.|+++++
T Consensus 46 ~~~~~dlvilD~~lp~~~-------------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l 104 (133)
T 3b2n_A 46 EEYNPNVVILDIEMPGMT-------------GLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYV 104 (133)
T ss_dssp HHHCCSEEEECSSCSSSC-------------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred hhcCCCEEEEecCCCCCC-------------HHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEE
Confidence 344578777754321111 15666667665678999988887888999999989998764
No 482
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=71.69 E-value=35 Score=31.89 Aligned_cols=69 Identities=9% Similarity=0.174 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCC-CceEEEccCC--CCHHHHHHHH
Q 023442 56 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI--NTVDEVNAAL 132 (282)
Q Consensus 56 ~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~-~ipVi~nGdI--~s~eda~~~l 132 (282)
+..++++++.+.+++.++.+|. +.. ++-+|+...++.+... ++|| ...+. +|++++.+++
T Consensus 273 ~a~~~~~~~~~~l~~y~i~~iE--------dPl--------~~~D~~g~~~l~~~~g~~ipI-~gDe~~v~~~~~~~~~i 335 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDYPIVSIE--------DPY--------DQDDFAGFAGITEALKGKTQI-VGDDLTVTNTERIKMAI 335 (432)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--------CCS--------CTTCHHHHHHHHHHTTTTSEE-EESTTTTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCceEEE--------CCC--------CcchHHHHHHHHHhcCCCCeE-EecCcccCCHHHHHHHH
Confidence 4556666666788888765542 222 1223777777766532 6899 55554 8999999999
Q ss_pred H-cCCCEEEe
Q 023442 133 R-KGAHHVMV 141 (282)
Q Consensus 133 ~-~g~DgVmI 141 (282)
+ ..||.|.+
T Consensus 336 ~~~a~d~i~i 345 (432)
T 2ptz_A 336 EKKACNSLLL 345 (432)
T ss_dssp HTTCCSEEEE
T ss_pred HcCCCCEEEe
Confidence 9 56888876
No 483
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=71.46 E-value=12 Score=35.46 Aligned_cols=71 Identities=7% Similarity=0.023 Sum_probs=51.0
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 64 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 64 v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
+++..++. +.+|.|-.-..+++|. ++.+.++.+. +++||+---=|.+.-++.++...|||+|.+==
T Consensus 73 iA~~y~~~-A~~IsvLTd~~~F~gs------------~~dL~~vr~~-v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~ 138 (452)
T 1pii_A 73 IAAIYKHY-ASAISVLTDEKYFQGS------------FNFLPIVSQI-APQPILCKDFIIDPYQIYLARYYQADACLLML 138 (452)
T ss_dssp HHHHHTTT-CSEEEEECCSTTTCCC------------TTHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEET
T ss_pred HHHHHHhh-CcEEEEEecccccCCC------------HHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHcCCCEEEEEc
Confidence 45566666 9999998766566664 3455555554 58999988778888888887779999996654
Q ss_pred HhhhC
Q 023442 144 AAYQN 148 (282)
Q Consensus 144 gal~n 148 (282)
+++.+
T Consensus 139 a~l~~ 143 (452)
T 1pii_A 139 SVLDD 143 (452)
T ss_dssp TTCCH
T ss_pred ccCCH
Confidence 45543
No 484
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.10 E-value=2.4 Score=38.00 Aligned_cols=86 Identities=10% Similarity=-0.013 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhc-CCCceEE-EccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-FPDLTFT-LNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~-~~~ipVi-~nGdI~s~eda~~~l~- 133 (282)
.+.+.+. .+.+.+.|++.|.+-|-|+.....+..+ +.+.+...++. ..++||| +.|...+.+.++....
T Consensus 24 ~~~l~~l-v~~li~~Gv~gl~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 95 (300)
T 3eb2_A 24 ADVMGRL-CDDLIQAGVHGLTPLGSTGEFAYLGTAQ-------REAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLY 95 (300)
T ss_dssp HHHHHHH-HHHHHHTTCSCBBTTSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEECccccCccccCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 3343333 3345579999999988775433332111 12223333332 2357876 5666554444443332
Q ss_pred --cCCCEEEecHHhhhCCc
Q 023442 134 --KGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 134 --~g~DgVmIGRgal~nP~ 150 (282)
.|+|+||+.-..+..|.
T Consensus 96 ~~~Gadavlv~~P~y~~~~ 114 (300)
T 3eb2_A 96 EKLGADGILAILEAYFPLK 114 (300)
T ss_dssp HHHTCSEEEEEECCSSCCC
T ss_pred HHcCCCEEEEcCCCCCCCC
Confidence 79999999987776664
No 485
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=71.02 E-value=2.9 Score=39.90 Aligned_cols=64 Identities=14% Similarity=0.124 Sum_probs=43.1
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecHHh
Q 023442 66 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 145 (282)
Q Consensus 66 ~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGRga 145 (282)
.++.+.|++.+.+.+- .|... . -++.+..+++.. ++||+ .|+|.+.+++..+. |+|+|.+|.|.
T Consensus 234 ~~l~~~gvd~lvvdta----~G~~~-~-------~L~~I~~l~~~~-~vpvi-~k~v~~~~~a~~l~--G~d~v~vg~g~ 297 (486)
T 2cu0_A 234 IELDKAGVDVIVVDTA----HAHNL-K-------AIKSMKEMRQKV-DADFI-VGNIANPKAVDDLT--FADAVKVGIGP 297 (486)
T ss_dssp HHHHHTTCSEEEEECS----CCCCH-H-------HHHHHHHHHHTC-CSEEE-EEEECCHHHHTTCT--TSSEEEECSSC
T ss_pred HHHHHhcCCceEEEec----CCcEe-e-------hhhHHHHHHHHh-CCccc-cCCcCCHHHHHHhh--CCCeEEEeeee
Confidence 3566899999888751 22210 0 134455565544 89995 77888999998777 99999996543
No 486
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=71.00 E-value=25 Score=25.74 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=32.6
Q ss_pred HHHHHHHHhc-CCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 101 YEYYYALLRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 101 ~~~i~~l~~~-~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
++.+..+.+. .+++|||.-.+-.+.+.+.++++.|+++++.
T Consensus 68 ~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (136)
T 3hdv_A 68 LDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLL 109 (136)
T ss_dssp HHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEe
Confidence 5666677665 4789999888888999999999999998743
No 487
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=70.95 E-value=20 Score=31.24 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhhcC---CccEEEEecCC-----CCC-CCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCC
Q 023442 25 PKFVGEAMSVIAANT---NVPVSVKCRIG-----VDD-HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 95 (282)
Q Consensus 25 p~~~~eiv~~v~~~~---~ipvsvKiR~G-----~d~-~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~ 95 (282)
.+...+.|++++++. ++|+.|--|.+ .++ .+..+++++. ++.++++|++.|.+++-..
T Consensus 126 ~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~r-a~a~~eAGAd~i~~e~~~~------------ 192 (255)
T 2qiw_A 126 AQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKR-IKLMEQAGARSVYPVGLST------------ 192 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHH-HHHHHHHTCSEEEECCCCS------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHH-HHHHHHcCCcEEEEcCCCC------------
Confidence 355666677776652 57865555643 222 1235666655 4567899999999987321
Q ss_pred CCCccHHHHHHHHhcCCCceEEEc--cCCCCH-HHHHHHHHcCCCEEEecHH
Q 023442 96 IPPLKYEYYYALLRDFPDLTFTLN--GGINTV-DEVNAALRKGAHHVMVGRA 144 (282)
Q Consensus 96 i~~~~~~~i~~l~~~~~~ipVi~n--GdI~s~-eda~~~l~~g~DgVmIGRg 144 (282)
-+.+.++.++ .++|+-.+ ++-.|+ -+..++-+.|+.-|..|-.
T Consensus 193 -----~~~~~~i~~~-~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 193 -----AEQVERLVDA-VSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp -----HHHHHHHHTT-CSSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred -----HHHHHHHHHh-CCCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 2445666665 46777554 332111 2344555579999988865
No 488
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=70.89 E-value=13 Score=27.28 Aligned_cols=60 Identities=12% Similarity=-0.051 Sum_probs=39.9
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
.+...+.+.+.-...... .++.+..+.+..+++|||.-.+-.+.+...++++.|+++++.
T Consensus 43 ~~~~~dlii~d~~l~~~~-------------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 102 (134)
T 3f6c_A 43 ETLKPDIVIIDVDIPGVN-------------GIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVS 102 (134)
T ss_dssp HHHCCSEEEEETTCSSSC-------------HHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEE
T ss_pred HhcCCCEEEEecCCCCCC-------------hHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEe
Confidence 345678888765432111 166777777767789998877777888888888899998644
No 489
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=70.85 E-value=36 Score=26.73 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=43.8
Q ss_pred HHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 67 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
.+.+...|.+.+--.-....| ++.+..+.+..+++|||.-.+-.+.+.+.++++.|+++++.
T Consensus 46 ~~~~~~~dlvl~D~~lp~~~g-------------~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~ 107 (184)
T 3rqi_A 46 LAGAEKFEFITVXLHLGNDSG-------------LSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLA 107 (184)
T ss_dssp HHTTSCCSEEEECSEETTEES-------------HHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred HHhhCCCCEEEEeccCCCccH-------------HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHhee
Confidence 345666787777543211122 67777776667789998877778999999999999997754
No 490
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=70.50 E-value=36 Score=29.83 Aligned_cols=97 Identities=12% Similarity=0.058 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHhhcCCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHH
Q 023442 24 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 103 (282)
Q Consensus 24 ~p~~~~eiv~~v~~~~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~ 103 (282)
|.+.+.+++++.. +.|+|. .|. +|...+..+.+ +.+.+.|++.|--||-... + .-..+.
T Consensus 102 D~~~~~~Li~~a~---~~~vTF-HRA-fD~~~d~~~al----e~L~~lG~~rILTSG~~~~------a------~~g~~~ 160 (256)
T 1twd_A 102 DMPRMEKIMAAAG---PLAVTF-HRA-FDMCANPLYTL----NNLAELGIARVLTSGQKSD------A------LQGLSK 160 (256)
T ss_dssp CHHHHHHHHHHHT---TSEEEE-CGG-GGGCSCHHHHH----HHHHHHTCCEEEECTTSSS------T------TTTHHH
T ss_pred CHHHHHHHHHHhC---CCcEEE-ECc-hhccCCHHHHH----HHHHHcCCCEEECCCCCCC------H------HHHHHH
Confidence 4455555554432 345554 343 44322222222 2334567887776663210 0 112566
Q ss_pred HHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEec
Q 023442 104 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 142 (282)
Q Consensus 104 i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIG 142 (282)
++++++....|-|...||| +.+.+.+++++|++.+-.+
T Consensus 161 L~~Lv~~a~~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 161 IMELIAHRDAPIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHTSSSCCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHhhCCcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 7777664336788888998 5566666668899988765
No 491
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=70.45 E-value=17 Score=26.70 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=43.0
Q ss_pred HHHhCCCCEEEEecCCccc--CCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 67 VSSLSPTRHFIIHSRKALL--NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 67 ~le~~Gv~~i~VH~Rt~~~--~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
.+.+...|.+.+....... .+. + .++.+..+.+..+.+|||.-.+-.+.+.+.++++.|+++++.
T Consensus 42 ~l~~~~~dlvi~d~~~~~~~~~~~---~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 108 (140)
T 2qr3_A 42 VLREENPEVVLLDMNFTSGINNGN---E-------GLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVV 108 (140)
T ss_dssp HHHHSCEEEEEEETTTTC-----C---C-------HHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHcCCCCEEEEeCCcCCCCCCCc---c-------HHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheee
Confidence 3455668888887543100 011 1 156666776666789998877777888888888899998753
No 492
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=69.70 E-value=9.2 Score=34.52 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCc--ccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHH-
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKA--LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR- 133 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~--~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~- 133 (282)
.++..+| +++.|+|.|.+.-.|. .|++.. -|.++++.+.++.+ .+++|++.-|+=.-+++..+.++
T Consensus 157 Peea~~F----v~~TgvD~LAvaiGt~HG~Yk~~~------~p~Ld~~~L~~I~~-~~~~PLVlHGgS~vp~~~~~~~~~ 225 (307)
T 3n9r_A 157 PKEAEQF----VKESQVDYLAPAIGTSHGAFKFKG------EPKLDFERLQEVKR-LTNIPLVLHGASAIPDNVRKSYLD 225 (307)
T ss_dssp HHHHHHH----HHHHCCSEEEECSSCCSSSBCCSS------SCCCCHHHHHHHHH-HHCSCEEESSCCCCCHHHHHHHHH
T ss_pred HHHHHHH----HHHHCCCEEEEecCCcccccCCCC------CCccCHHHHHHHHh-cCCCCeEEeCCCCcchHHHHHHHH
Confidence 4454444 4678999999875552 343211 14567888888844 46899999999888999999998
Q ss_pred cCCC
Q 023442 134 KGAH 137 (282)
Q Consensus 134 ~g~D 137 (282)
+|-+
T Consensus 226 ~gg~ 229 (307)
T 3n9r_A 226 AGGD 229 (307)
T ss_dssp TTCC
T ss_pred hcCc
Confidence 6644
No 493
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=69.63 E-value=4.7 Score=37.57 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=32.3
Q ss_pred ccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEe
Q 023442 99 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 141 (282)
Q Consensus 99 ~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmI 141 (282)
..|+.+..+++. .++||+.- ++.+++|++.+.+.|+|+|.+
T Consensus 239 ~~~~~i~~lr~~-~~~PvivK-gv~~~e~A~~a~~aGad~I~v 279 (392)
T 2nzl_A 239 ISWEDIKWLRRL-TSLPIVAK-GILRGDDAREAVKHGLNGILV 279 (392)
T ss_dssp CCHHHHHHHC---CCSCEEEE-EECCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHh-hCCCEEEE-ecCCHHHHHHHHHcCCCEEEe
Confidence 458877777554 57999876 468999999999999999998
No 494
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=69.60 E-value=7.8 Score=34.54 Aligned_cols=54 Identities=6% Similarity=-0.129 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCC
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGA 136 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~ 136 (282)
.+++++. ++.++++|++.|.+.+-. -+...++.++ .++|+|+-|.= .+|
T Consensus 178 a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~-l~iP~igIGaG-----------~~~ 226 (281)
T 1oy0_A 178 AEQTIAD-AIAVAEAGAFAVVMEMVP------------------AELATQITGK-LTIPTVGIGAG-----------PNC 226 (281)
T ss_dssp HHHHHHH-HHHHHHHTCSEEEEESCC------------------HHHHHHHHHH-CSSCEEEESSC-----------SCS
T ss_pred HHHHHHH-HHHHHHcCCcEEEEecCC------------------HHHHHHHHHh-CCCCEEEeCCC-----------CCC
Confidence 3555554 567889999999998732 1334456555 47999875532 468
Q ss_pred CEEEe
Q 023442 137 HHVMV 141 (282)
Q Consensus 137 DgVmI 141 (282)
||=++
T Consensus 227 dgQvL 231 (281)
T 1oy0_A 227 DGQVL 231 (281)
T ss_dssp SEEEE
T ss_pred Cccee
Confidence 87544
No 495
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=69.56 E-value=17 Score=32.12 Aligned_cols=94 Identities=9% Similarity=0.014 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCC---EEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCce
Q 023442 39 TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR---HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT 115 (282)
Q Consensus 39 ~~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~---~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ip 115 (282)
.+.|+.+=++ |. ..++..+ .++.++++|+| .|.+|.-.....|. .++..-+..-++.+.++.+. .++|
T Consensus 92 ~~~p~~~~i~-g~----~~~~~~~-~a~~~~~~g~d~~~~iein~~~P~~~g~--~~~g~~~~~~~~ii~~vr~~-~~~P 162 (314)
T 2e6f_A 92 SKKPLFLSIS-GL----SVEENVA-MVRRLAPVAQEKGVLLELNLSCPNVPGK--PQVAYDFEAMRTYLQQVSLA-YGLP 162 (314)
T ss_dssp TTCCEEEEEC-CS----SHHHHHH-HHHHHHHHHHHHCCEEEEECCCCCSTTC--CCGGGSHHHHHHHHHHHHHH-HCSC
T ss_pred CCCcEEEEeC-CC----CHHHHHH-HHHHHHHhCCCcCceEEEEcCCCCCCCc--hhhcCCHHHHHHHHHHHHHh-cCCC
Confidence 4688888775 22 2344444 35566788999 99998532111221 11100001113445555443 3678
Q ss_pred EE--EccCCCCHHHHH----HHHHcC-CCEEEec
Q 023442 116 FT--LNGGINTVDEVN----AALRKG-AHHVMVG 142 (282)
Q Consensus 116 Vi--~nGdI~s~eda~----~~l~~g-~DgVmIG 142 (282)
|+ .++++ +.+++. .+.+.| +|+|.+.
T Consensus 163 v~vK~~~~~-~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 163 FGVKMPPYF-DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp EEEEECCCC-CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred EEEEECCCC-CHHHHHHHHHHHHhcCCceEEEEe
Confidence 76 35665 666643 333489 9999653
No 496
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=69.38 E-value=12 Score=31.17 Aligned_cols=54 Identities=20% Similarity=0.263 Sum_probs=35.0
Q ss_pred HhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEEecH
Q 023442 69 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 143 (282)
Q Consensus 69 e~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVmIGR 143 (282)
.++|++.+++|.... + .+.++++ ..++.+.. .+.|.+++.++.+.|+|.|++|.
T Consensus 85 ~~~gad~v~l~~~~~--------------~--~~~~~~~---~~~~~ig~--sv~t~~~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 85 LFSTIHRVQLPSGSF--------------S--PKQIRAR---FPHLHIGR--SVHSLEEAVQAEKEDADYVLFGH 138 (221)
T ss_dssp HTTTCCEEEECTTSC--------------C--HHHHHHH---CTTCEEEE--EECSHHHHHHHHHTTCSEEEEEC
T ss_pred HHcCCCEEEeCCCcc--------------C--HHHHHHH---CCCCEEEE--EcCCHHHHHHHHhCCCCEEEECC
Confidence 467888888876321 0 2333332 22443332 67899999988889999999964
No 497
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=68.84 E-value=19 Score=31.10 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHHHHhcCCCceEEEccCCCCHH----------
Q 023442 57 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD---------- 126 (282)
Q Consensus 57 ~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~l~~~~~~ipVi~nGdI~s~e---------- 126 (282)
+.+.+..+++...++|++.+.+++... ..+.+..+.-.++...||.-..
T Consensus 142 ~~~~v~~~A~~a~~~g~~GvV~s~~e~---------------------~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~ 200 (239)
T 3tr2_A 142 VPDIVCRMATLAKSAGLDGVVCSAQEA---------------------ALLRKQFDRNFLLVTPGIRLETDEKGDQKRVM 200 (239)
T ss_dssp HHHHHHHHHHHHHHHTCCEEECCHHHH---------------------HHHHTTCCTTSEEEECCBC----------CCB
T ss_pred HHHHHHHHHHHHHHcCCCEEEECchhH---------------------HHHHHhcCCCcEEECCCcCCCCCCcCcccccC
Confidence 334444456667788999998775310 1121212111244445554211
Q ss_pred HHHHHHHcCCCEEEecHHhhhCCc
Q 023442 127 EVNAALRKGAHHVMVGRAAYQNPW 150 (282)
Q Consensus 127 da~~~l~~g~DgVmIGRgal~nP~ 150 (282)
...++++.|+|.+.+||+++..+.
T Consensus 201 t~~~~~~aGad~lVvGr~I~~a~d 224 (239)
T 3tr2_A 201 TPRAAIQAGSDYLVIGRPITQSTD 224 (239)
T ss_dssp CHHHHHHHTCSEEEECHHHHTSSS
T ss_pred CHHHHHHcCCCEEEEChHHhCCCC
Confidence 134455679999999999988665
No 498
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=68.83 E-value=28 Score=25.04 Aligned_cols=40 Identities=18% Similarity=0.088 Sum_probs=30.9
Q ss_pred HHHHHHHHhcCCCceEEEccCCCCHHHHHHHHHcCCCEEE
Q 023442 101 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 140 (282)
Q Consensus 101 ~~~i~~l~~~~~~ipVi~nGdI~s~eda~~~l~~g~DgVm 140 (282)
++.+..+.+..+++|||.-.+-.+.+.+.++++.|++++.
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 102 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFI 102 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHhe
Confidence 5666666665578999887777888899999998988654
No 499
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=68.65 E-value=45 Score=28.08 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.7
Q ss_pred HHHHHHhhcC---CccEEEEecCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCcCCcCCCCCccHHHHHH
Q 023442 30 EAMSVIAANT---NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 106 (282)
Q Consensus 30 eiv~~v~~~~---~ipvsvKiR~G~d~~~~~~e~~~~v~~~le~~Gv~~i~VH~Rt~~~~G~~~ad~~~i~~~~~~~i~~ 106 (282)
++++.+++.. .+++-+|+ . |.+.+ +++.+.++|+|.++||+-.. . + ......+
T Consensus 47 ~~v~~l~~~~p~~~iflDlKl--~-Dip~t-------~~~~~~~~Gad~vtVH~~~g----~---~-------~l~~a~~ 102 (221)
T 3exr_A 47 ELVEVLRSLFPDKIIVADTKC--A-DAGGT-------VAKNNAVRGADWMTCICSAT----I---P-------TMKAARK 102 (221)
T ss_dssp HHHHHHHHHCTTSEEEEEEEE--C-SCHHH-------HHHHHHTTTCSEEEEETTSC----H---H-------HHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEEe--e-ccHHH-------HHHHHHHcCCCEEEEeccCC----H---H-------HHHHHHH
Confidence 4566666653 35555665 2 43222 22345689999999998421 0 0 0122222
Q ss_pred HHhcCC---C-ceEEEccCCCCHHHHHHHHHcCCCEEEecHHhh
Q 023442 107 LLRDFP---D-LTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 146 (282)
Q Consensus 107 l~~~~~---~-ipVi~nGdI~s~eda~~~l~~g~DgVmIGRgal 146 (282)
.+++.. . +-|..+... +.+++.++++.++|-+.+.++..
T Consensus 103 ~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~ 145 (221)
T 3exr_A 103 AIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRD 145 (221)
T ss_dssp HHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHH
T ss_pred HHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHh
Confidence 222211 1 233344443 78888888777888877755543
No 500
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=68.63 E-value=2.8 Score=36.75 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=30.2
Q ss_pred CceEEEccCCCCHHHHHHHHH-cCCCEEEecHHhhhCCccchh
Q 023442 113 DLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPWYTLG 154 (282)
Q Consensus 113 ~ipVi~nGdI~s~eda~~~l~-~g~DgVmIGRgal~nP~if~~ 154 (282)
+++|++.|+| +++.+.+++. .++||+.||++.|. |. |..
T Consensus 203 ~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~-F~~ 242 (249)
T 3th6_A 203 KVRIQYGGSV-NAGNCKELGRKPDIDGFLVGGASLK-PE-FVQ 242 (249)
T ss_dssp HCCEEECSCC-CTTTHHHHHTSTTCCEEEECGGGGS-TH-HHH
T ss_pred cccEEEcCcc-CHhHHHHHhcCCCCCEEEeehHhhh-HH-HHH
Confidence 4899999998 5555556665 99999999988875 66 643
Done!