BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023443
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43333|RU2A_ARATH U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana
GN=At1g09760 PE=2 SV=2
Length = 249
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/243 (80%), Positives = 213/243 (87%), Gaps = 10/243 (4%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTADLIWKSPHFFNAIKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P+LNRLGTL+INNNRITRINPN+GEFLPKLH+LVLTNNRLVNLVEIDPL S+PKLQ+LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDF----KKERMEAASLFASEEMEEEAKKESMKTLM 176
LDN+ITKK NYRLYVIHKLKSLRVLDF KER EAASLF+S+E EEE KK S +
Sbjct: 121 LDNNITKKANYRLYVIHKLKSLRVLDFIKIKAKERAEAASLFSSKEAEEEVKKVSRE--- 177
Query: 177 PVEVPNVSEEEEQ-QTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLK 235
EV VSE E +TPKVVAPT EQI+AIKAAI+NSQT+EE+ARLE+ LK GQ+PA L
Sbjct: 178 --EVKKVSETAENPETPKVVAPTAEQILAIKAAIINSQTIEEIARLEQALKFGQVPAGLI 235
Query: 236 IPD 238
IPD
Sbjct: 236 IPD 238
>sp|Q4R8Y8|RU2A_MACFA U2 small nuclear ribonucleoprotein A' OS=Macaca fascicularis
GN=SNRPA1 PE=2 SV=1
Length = 255
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 154/239 (64%), Gaps = 15/239 (6%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEAK--KESMKT 174
L N +T K +YRLYVI+K+ +RVLDF+ KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 175 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 232
P +P K P+P + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|P09661|RU2A_HUMAN U2 small nuclear ribonucleoprotein A' OS=Homo sapiens GN=SNRPA1
PE=1 SV=2
Length = 255
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 154/239 (64%), Gaps = 15/239 (6%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEAK--KESMKT 174
L N +T K +YRLYVI+K+ +RVLDF+ KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 175 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 232
P +P K P+P + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|P57784|RU2A_MOUSE U2 small nuclear ribonucleoprotein A' OS=Mus musculus GN=Snrpa1
PE=1 SV=2
Length = 255
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 153/239 (64%), Gaps = 15/239 (6%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEAK--KESMKT 174
L N +T K +YRLYVI+K+ +RVLDF+ KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 175 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 232
P +P K P+ + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSAGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|Q9BLB6|RU2A_CAEEL Probable U2 small nuclear ribonucleoprotein A' OS=Caenorhabditis
elegans GN=sap-1 PE=1 SV=1
Length = 253
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MVRLT +L + P F N++ RE++LRG KI VIEN+G T DQFD IDL+DN+I KL+N
Sbjct: 1 MVRLTTELFAERPQFVNSVNMREINLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLDNF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P +RL TL ++NNRI I P+I LP L TL LTNN + L +I+PL KL++++
Sbjct: 61 PTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICELGDIEPLAECKKLEYVTF 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLF--ASEEMEEEAKKESMKT 174
+ N IT K NYR+Y+I+KL ++RV+DF + ER A +F S + +A ++S+ T
Sbjct: 121 IGNPITHKDNYRMYMIYKLPTVRVIDFNRVRLTEREAAKKMFKGKSGKKARDAIQKSVHT 180
Query: 175 LMPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 231
P E+ E E + T E IK AI N+++L EV L+ +L SG++P
Sbjct: 181 EDPSEI----EPNENSSGGGARLTDEDREKIKEAIKNAKSLSEVNYLQSILASGKVP 233
>sp|Q9V4Q8|RU2A_DROME Probable U2 small nuclear ribonucleoprotein A' OS=Drosophila
melanogaster GN=U2A PE=2 SV=1
Length = 265
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 7/238 (2%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LT +LI +S + N +ERELDLRG KI IENLGAT DQFDTIDLSDN++ KL+N+
Sbjct: 1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNL 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
PHL RL L++NNNRI RI+ + E +P L +++LT N L L +++PL KL+ + L
Sbjct: 61 PHLPRLKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICL 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEAKKESMKTLM 176
L N ++ KPNYR Y+ +K LR+LDF+ K+R A F +++ ++ K+ S K+ M
Sbjct: 121 LINPVSTKPNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSKM 180
Query: 177 P---VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 231
+ + + P+ + I+ AI + +L EV RL ++L+SGQLP
Sbjct: 181 SAAAAIAAEAGNGKGRGSEGGRLANPQDMQRIREAIKRASSLAEVERLSQILQSGQLP 238
>sp|Q9USX8|RU2A_SCHPO U2 small nuclear ribonucleoprotein A' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lea1 PE=1 SV=1
Length = 239
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 136/238 (57%), Gaps = 8/238 (3%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RL A+ + + P F + +KE ELDLR +I +IENLG D D ID +DN+I L N P
Sbjct: 1 MRLNAEFLSQVPSFISPLKETELDLRWYQIPIIENLGVLRDVHDAIDFTDNDIRYLGNFP 60
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
+ RL TL+ NNRIT I P+IG+ LP L TL L N L + ++DPL S P+L LS +
Sbjct: 61 RMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCI 120
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLFASEEMEEEAKKESM--KTL 175
DN + +K YRLY+I ++ SL +LDF++ ER+ A +F + E M K+
Sbjct: 121 DNPVAQKQYYRLYLIWRIPSLHILDFERVRRNERLRAEEVFGQIQNPTEIASSIMGVKSR 180
Query: 176 MPVEVPNVSEEEEQQTPKVVAP--TPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 231
+ V E +P TPE+ IK AI N+ ++ E+ RLE +L G++P
Sbjct: 181 VFDLAALVQSHPEANSPITTGYTLTPEEREKIKEAIKNASSIAEINRLEAMLLEGKIP 238
>sp|Q4WV66|RU2A_ASPFU U2 small nuclear ribonucleoprotein A' OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=lea1 PE=3 SV=1
Length = 253
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 145/256 (56%), Gaps = 16/256 (6%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT +LI S + N +K+RELDLRG+KI IENLG +DQ D ID +DN+I L N P
Sbjct: 1 MRLTVELIQNSLSYINPLKDRELDLRGHKIPTIENLGIAKDQ-DAIDFTDNDISSLGNFP 59
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
RL TL++ NR+ I P I +P L TLVLT N + L ++DPL +L +L L LL
Sbjct: 60 FFPRLHTLLLARNRVKHIQPTIASTIPNLTTLVLTANNMAELADLDPLRNLTRLTHLVLL 119
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLFAS-EEMEEEAKKESMKTLM 176
+N +T+K +YR +VI ++ S+R LD++K ER +A LF + EE A K
Sbjct: 120 ENPVTRKEHYRYWVIWRIPSVRFLDYQKVKDAERAKAKELFGTAEEPTALASKIMGIKSR 179
Query: 177 PVEVPNVSEEEEQQTPKV-VAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLK 235
+VP+ E V V T ++ ++ I +++L+E+ RLEK L G++P
Sbjct: 180 TFDVPSGGAERAPADKAVRVKLTEKERKRVEKMIREARSLQEITRLEKELNEGRIPG--- 236
Query: 236 IPDYDSGSKDVKENDE 251
G+ D E+ E
Sbjct: 237 ------GALDAGEDSE 246
>sp|Q4P5F9|RU2A_USTMA U2 small nuclear ribonucleoprotein A' OS=Ustilago maydis (strain
521 / FGSC 9021) GN=LEA1 PE=3 SV=1
Length = 246
Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 145/243 (59%), Gaps = 15/243 (6%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
++LT +L+ +S N +++RELDLRG KI IENLG T DQ D IDL+DN+I L N P
Sbjct: 1 MKLTPELLSRSSSSINTLRDRELDLRGLKIPAIENLGVTRDQNDAIDLTDNDIRYLGNFP 60
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
L +L TL + NN I+RI+P IG LP LH+L LTNN + +L E+ L+ +L++L L+
Sbjct: 61 LLQQLKTLQLANNLISRIDPRIGHSLPALHSLNLTNNCISDLSELVHLSKCRRLEYLCLM 120
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEA-----KKESM 172
+++ YR +VI KL +RVLD++ KER A L +E+ A K+
Sbjct: 121 GTPASREAQYREFVIWKLPQVRVLDYQRIKDKERARAKDLMETEDGRPTALAANILKKLG 180
Query: 173 KTLMPVEVPNVSEEEEQQTPKVVAPTPEQII------AIKAAIVNSQTLEEVARLEKVLK 226
+ M V+V + +++ P + + +++ AI+ AI +S++LEE+ +LE+ LK
Sbjct: 181 ASAMDVDVDVMVGKQKTFEPGRLNGSSRRLLTAEERKAIEDAIESSESLEEIRKLEEQLK 240
Query: 227 SGQ 229
G
Sbjct: 241 MGH 243
>sp|Q7S9P4|RU2A_NEUCR U2 small nuclear ribonucleoprotein A' OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=lea-1 PE=3 SV=1
Length = 252
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 130/250 (52%), Gaps = 11/250 (4%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLTADLI S + N +KERE+DLRG++I IENLG D ID +DN+I L N P
Sbjct: 1 MRLTADLINNSLSYLNPLKEREIDLRGHRIPAIENLGVAGPH-DAIDFTDNDIQVLGNFP 59
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
R+ TL++ NRI +I + P L LVL +N + L +++ L P+L L L
Sbjct: 60 LSPRIRTLLLARNRIAQIQSTLPNATPNLKNLVLASNNIGELADLEVLGRFPRLTHLVLT 119
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLFASE----EMEEEAKKESMK 173
DN +TKK NYR +V+ +R LD+ K ER +A LF + E+ + K K
Sbjct: 120 DNPVTKKENYRYWVLWLCPQVRFLDYVKVKDAERQKAKELFGTADEPTELAKTIKGIKSK 179
Query: 174 TLMPVEVPNVSEEEEQQTPKV--VAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 231
T + K+ + T ++ ++ I + +LEE+ RLEK L G+LP
Sbjct: 180 TFDVGASSANGAAGSGPSSKLSRLKLTEKEKKKLQDLIKKADSLEEIIRLEKALNEGRLP 239
Query: 232 ADLKIPDYDS 241
+ D D+
Sbjct: 240 PGIIAEDDDA 249
>sp|Q5BGW9|RU2A_EMENI U2 small nuclear ribonucleoprotein A' OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=lea1 PE=3 SV=1
Length = 230
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 48/247 (19%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT +LI S + N +K+RELDLR DN+I L N P
Sbjct: 1 MRLTVELIQNSLSYINPLKDRELDLR-----------------------DNDISSLGNFP 37
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
RL L++ NR+ +I P++ +P L TLVLT N + L ++DPL +L KL L LL
Sbjct: 38 FFPRLRMLLLARNRVRQIQPSLANSIPGLTTLVLTANNIAELADLDPLRNLTKLTHLVLL 97
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLF--ASEEMEEEAKKESMKTL 175
+N +T+K YRL++I ++ S+R LD++K ER +AA LF A+E +K +K+
Sbjct: 98 ENPVTRKEYYRLWIIWRIPSVRFLDYQKVKDAERAKAAELFGTATEPTALASKILGVKS- 156
Query: 176 MPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAA----------IVNSQTLEEVARLEKVL 225
++P+ ++ P PE+ + +K I +++L+E+ RLE+ L
Sbjct: 157 RTFDIPSGGAADQ--------PPPEKRLRVKLTDSERKRIEKMIREAKSLQEITRLEREL 208
Query: 226 KSGQLPA 232
G++P
Sbjct: 209 NEGRIPG 215
>sp|Q6C417|RU2A_YARLI U2 small nuclear ribonucleoprotein A' OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=LEA1 PE=3 SV=1
Length = 230
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 100/162 (61%), Gaps = 10/162 (6%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RL AD I + + N I +REL+LRG +I VIENLG TED + ++DLSDNEI + P
Sbjct: 30 MRLNADTILNAQSYINPIGDRELNLRGLQIPVIENLGVTEDHYTSLDLSDNEIRVMGGFP 89
Query: 62 HLNRLGTLIINNNRITRIN--PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLS 119
L L TL+++ NRIT+IN NI KL TLVLT N + L ++ L SL L ++
Sbjct: 90 RLETLRTLLLSKNRITQINDVKNIA----KLETLVLTQNGIATLGALESLKSLVNLTAIT 145
Query: 120 LLDNSITKKPNYRLYVIHKLKSLRVLDF----KKERMEAASL 157
L N + P YR Y+I L SLR+LDF +KER EA ++
Sbjct: 146 LDGNPVQHVPRYRSYMISILPSLRMLDFQRVTQKERDEAEAM 187
>sp|Q6BT60|RU2A_DEBHA U2 small nuclear ribonucleoprotein A' OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=LEA1 PE=3 SV=2
Length = 238
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT+ ++ +P N K+ L LR KI +ENLG T+D ++ IDL+DNE+++L N P
Sbjct: 1 MRLTSQVLSDAPTIINPEKQVTLSLRSLKIPYLENLGITKDTYEVIDLTDNELIELSNFP 60
Query: 62 HLNRLGTLIINNNRITRINPN-IGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L L L++ NN IT IN + + LP L ++ +N + ++ L L ++
Sbjct: 61 RLKNLKVLLVGNNNITGINDDKLPNNLPHLQSISFIHNNISKFSDVRILCRFKNLSNITF 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDF----KKERMEAASLFA 159
++N IT PNYR +++ + +L+VLDF +KE ++A LF
Sbjct: 121 IENPITDSPNYRYFIVWLIPTLKVLDFSKVKQKELVKAKELFG 163
>sp|Q5A449|RU2A_CANAL U2 small nuclear ribonucleoprotein A' OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=LEA1 PE=3 SV=1
Length = 233
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 12/235 (5%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLTA +I ++P N + L LR +I +ENL T++++ IDLS+N+++ L N+P
Sbjct: 1 MRLTAQVINEAPEILNPEGKLTLLLRDLQITELENLAITQNKYQVIDLSNNDLISLGNIP 60
Query: 62 -HLNRLGTLIINNNRITRINPNIGEFLPK---LHTLVLTNNRLVNLVEIDPLTSLPKLQF 117
N L L+++NN I+ I+ E P + ++ L NN + + PKL+
Sbjct: 61 KRFNNLQCLLLSNNNISYID---DESFPSDNHITSITLFNNNIYQF-QKSFKDKFPKLET 116
Query: 118 LSLLDNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLFASEEMEEEAKKESMK 173
L LL N IT+ NYR ++I + SL+VLDFKK ER + +F + E + + M
Sbjct: 117 LILLGNPITEMENYRYFIIWLIPSLKVLDFKKVKQAERKTSEDMFGTNRDEFNSLAQQMF 176
Query: 174 TLMPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSG 228
E+ + + Q V T E+ + + + ++EE+ R+E LK G
Sbjct: 177 KNENTEIKLDGKSDRQVKNFVKKMTDEERQQLLKKLETATSIEEIERIENDLKEG 231
>sp|Q7ZV84|DAAF1_DANRE Dynein assembly factor 1, axonemal OS=Danio rerio GN=dnaaf1 PE=2
SV=2
Length = 555
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 17 NAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRI 76
N + R L L N I +ENL + T+++S+N I +EN+ L+ L TL I++N +
Sbjct: 116 NQTELRCLFLHQNLIHTLENLEPLS-KLCTLNVSNNYIKVIENISSLSDLSTLQISHNTL 174
Query: 77 TRINPNIGEF--LPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRL 133
+ ++ E P + L L++NR+ + ++ L +P L+ L+L+ N + KK PNYR
Sbjct: 175 GNVC-DMEELSHCPSISVLDLSHNRISDPALVNILEKMPDLRVLNLMGNEVIKKIPNYRK 233
Query: 134 YVIHKLKSLRVLD----FKKERMEAASLFASEEMEEEAKKESM 172
+I +LK L LD F K+R A +A+ +E E K+ M
Sbjct: 234 TLIVRLKQLTYLDDRPVFPKDRA-CAEAWAAGGLEGEQKEREM 275
>sp|B6D5P6|DAAF1_PERCA Dynein assembly factor 1, axonemal OS=Peromyscus californicus
GN=Dnaaf1 PE=2 SV=1
Length = 622
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 13/154 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++GE L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLGECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLD----FKKERMEAASL----FASEEME 164
LK L LD F K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q755D2|RU2A_ASHGO U2 small nuclear ribonucleoprotein A' OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=LEA1 PE=3 SV=1
Length = 237
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 37/249 (14%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATED-------------QFDTID 48
++LT I ++P ++ + D+ +K+ ++ + G + + + +D
Sbjct: 1 MKLTPASILEAPVYYADHIHGKYDV--DKVVILRDCGYVSENEIMPQTLKLLPERTNIVD 58
Query: 49 LSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPK-LHTLVLTNNRLVNLVEID 107
++NE+ +L + H + + TL+++ NR+ R++ LP+ L L L NR ++
Sbjct: 59 FTNNELEELPPLGHNDTVHTLLLSRNRLGRLD---ASRLPRYLVNLNLAMNRFEKFEQLQ 115
Query: 108 PLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKERMEAASLFASEEMEEE 166
L S PK L+ L+L N I K YR VI L VLD ++ R + E +
Sbjct: 116 GLRSAPKTLKNLNLRGNVICHKEQYRETVIALCPQLAVLDGERVR----------QAERQ 165
Query: 167 AKKESMKTLMPVEVPN------VSEEEEQQTPKVVAPTPEQIIA-IKAAIVNSQTLEEVA 219
A ++ KT P E P SE+E Q VV + + IK + + TL E+
Sbjct: 166 AAPQNEKTDTPTEGPQPVALQATSEKELQLMDHVVNKMDKDTLEDIKQQLAKATTLAEIE 225
Query: 220 RLEKVLKSG 228
RLEK+L G
Sbjct: 226 RLEKLLSGG 234
>sp|Q8IW35|CEP97_HUMAN Centrosomal protein of 97 kDa OS=Homo sapiens GN=CEP97 PE=1 SV=1
Length = 865
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRIT--RINP 81
L+L GN + +E + + +DLSDN I ++ ++ L L TL+++ N IT R+ P
Sbjct: 107 LNLAGNNLKAMEQINSC-TALQHLDLSDNNISQIGDLSKLVSLKTLLLHGNIITSLRMAP 165
Query: 82 NIGEFLPK-LHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDN-SITKKP-----NYRLY 134
+LP+ L L L N + +L EI L SL +L+ LS+++N + P +YR Y
Sbjct: 166 ---AYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFDYRPY 222
Query: 135 VIHKLKSLRVLDF----KKERMEAASLFA 159
++ +LRVLD +KE ++A L++
Sbjct: 223 IVSWCLNLRVLDGYVISQKESLKAEWLYS 251
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 40 TEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI---------------NPNIG 84
E T+ L N+I+KLEN+ RL L + NNR+ R+ + +IG
Sbjct: 34 CEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRLVRMMGVAKLTLLRVLNLPHNSIG 93
Query: 85 --EFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSL 142
E L +L L N NL ++ + S LQ L L DN+I++ + + KL SL
Sbjct: 94 CVEGLKELVHLEWLNLAGNNLKAMEQINSCTALQHLDLSDNNISQIGD-----LSKLVSL 148
Query: 143 RVL 145
+ L
Sbjct: 149 KTL 151
>sp|Q9D5S7|LRGUK_MOUSE Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Mus musculus GN=Lrguk PE=2 SV=1
Length = 820
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 17 NAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRI 76
N I L L GNKI I+ LG + LS+N I + + L L L +++N+I
Sbjct: 235 NCISLTHLSLAGNKITTIKGLGTLP--IKVLSLSNNMIETITGLEELKALQNLDLSHNQI 292
Query: 77 TRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVI 136
+ + L L + L +N++ L EI+ + +LP L+ L+LL N I KP Y +VI
Sbjct: 293 SSLQGLENHDL--LEVINLEDNKIKELSEIEYIENLPILRVLNLLRNPIQTKPEYWFFVI 350
Query: 137 HKLKSLRVLDFKKERMEAASLFASEEMEEEAKKESMKTLMPVEVPNVSEEE---EQQTPK 193
+ L L LD +K ++E +FA + + + +++ M V ++S+ + + P
Sbjct: 351 YMLLRLTELDQQKIKVE-EKVFAVNKYDPPPEVVAVQDHMTHVVNSMSQPQRIWDSTLPS 409
Query: 194 VVAPTPEQIIAIKAAIVNSQTLEEVAR 220
+ AP P I+ AA + + R
Sbjct: 410 LDAPYPMLILTGPAACGKRELAHRLCR 436
>sp|Q9NJE9|TILB_TRYBB Protein TILB homolog OS=Trypanosoma brucei brucei GN=lrrc6 PE=3
SV=1
Length = 383
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 1 MVRLTADLIWK-SPHFFNAIKE-RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
M R+T DL+ + + H + +E+ L I IE +G + + + L +N I ++E
Sbjct: 1 MGRITTDLLRRRAEHNEGCLSNLKEVALHQQDIERIELIGDACRELEILYLCNNYISRIE 60
Query: 59 NMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFL 118
+ HL L L + N IT I G L L LT N + ++ ++ L + L L
Sbjct: 61 GLQHLKYLKYLNLAVNNITYIEGLEG--CEALERLDLTLNFVADVTCVERLRANAFLDQL 118
Query: 119 SLLDNSITKKPNYRLYVIHKLKSLRVLD----FKKERMEA 154
L N TK YR YV+H L LR LD K ER+EA
Sbjct: 119 HLTGNPCTKVAGYRAYVVHALPQLRELDGEEVIKTERLEA 158
>sp|Q08963|RU2A_YEAST U2 small nuclear ribonucleoprotein A' OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=LEA1 PE=1 SV=1
Length = 238
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLP-KLHTLVLTNNRLVNLVE 105
+DL++N+++ + ++ + + TL++ N I ++ G LP + L L+NN + +
Sbjct: 57 LDLTNNDLIMIPDLSRRDDIHTLLLGRNNIVEVD---GRLLPMNVQNLTLSNNSIRRFED 113
Query: 106 IDPLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFAS 160
+ L P+ L+ L+L+ N + NYR +V+ + L LDF+ +ER A S
Sbjct: 114 LQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVTAEERKSAMSF--- 170
Query: 161 EEMEEEAKKESMKTLMPVEVP---NVSEEEEQQTPKVVAP--TPEQIIAIKAAIVNSQTL 215
++ TL PV N S ++ + +V T E+ +K + + +L
Sbjct: 171 ------PRQADGDTLGPVNTAIRDNGSRDKTMEIMNLVVSKMTVERRNELKKQLAEATSL 224
Query: 216 EEVARLEKVLKSG 228
EE+ARLEK+L G
Sbjct: 225 EEIARLEKLLSGG 237
>sp|Q9CZ62|CEP97_MOUSE Centrosomal protein of 97 kDa OS=Mus musculus GN=Cep97 PE=2 SV=1
Length = 856
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRIT--RINP 81
L+L GN + +E + + +DLSDN I ++ ++ L L TL+++ N IT R+ P
Sbjct: 107 LNLAGNNLKTMEQVNSCT-ALQHLDLSDNNIPQIGDVSKLISLKTLLLHGNIITSLRMAP 165
Query: 82 NIGEFLPK-LHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDN-SITKKP-----NYRLY 134
+LP+ L L L N + +L EI L SL +L+ LS+++N + P +YR +
Sbjct: 166 ---AYLPRNLSILSLAENEIRDLNEISFLASLSELEQLSIMNNPCVMATPSIPGFDYRPF 222
Query: 135 VIHKLKSLRVLDF----KKERMEAASLFA 159
++ +LRVLD +KE ++A L++
Sbjct: 223 IVSWCLNLRVLDGYVISQKESLKAEWLYS 251
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 25/132 (18%)
Query: 34 IENLGA---TEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI----------- 79
++ LGA E T+ L N+I+KLEN+ +L L + NNR+ R+
Sbjct: 25 LQKLGANLPCEADVHTLILDKNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTQLRV 84
Query: 80 ----NPNIG--EFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRL 133
+ +IG E L L L N NL ++ + S LQ L L DN+I + +
Sbjct: 85 LNLPHNSIGCVEGLKDLVHLEWLNLAGNNLKTMEQVNSCTALQHLDLSDNNIPQ-----I 139
Query: 134 YVIHKLKSLRVL 145
+ KL SL+ L
Sbjct: 140 GDVSKLISLKTL 151
>sp|Q6AYH9|DAAF1_RAT Dynein assembly factor 1, axonemal OS=Rattus norvegicus GN=Dnaaf1
PE=2 SV=1
Length = 633
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 37/177 (20%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L N I IENL A + + + L N + K+EN+ L +L L ++NN I I
Sbjct: 126 RCLWLECNGIQRIENLQA-QSELRCLFLQVNLLHKIENLEPLQKLDALNLSNNYIKTIE- 183
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEI--------------------DP-----LTSLPKLQ 116
N+ LP L+TL + +NRL + +I DP L ++P L+
Sbjct: 184 NLS-CLPVLNTLQMAHNRLETVADIEHLRECLQLCVLDLSHNSLSDPEILSVLETMPCLR 242
Query: 117 FLSLLDNSITKK-PNYRLYVIHKLKSLRVLD----FKKERMEAASL----FASEEME 164
L+L+ N +TK PNYR V +LK L LD F K+R A + +A+E+ E
Sbjct: 243 VLNLMGNPVTKHIPNYRRTVTVRLKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q9D2H9|DAAF1_MOUSE Dynein assembly factor 1, axonemal OS=Mus musculus GN=Dnaaf1 PE=2
SV=1
Length = 634
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 13/154 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IEHLRECL-RLCVLDLSHNALSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLD----FKKERMEAASL----FASEEME 164
LK L LD F K+R A + +A+E+ E
Sbjct: 266 LKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q9D5E4|LRC48_MOUSE Leucine-rich repeat-containing protein 48 OS=Mus musculus GN=Lrrc48
PE=2 SV=1
Length = 523
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEI 106
+DLS N I +E + L L L ++NNRI++++ + L KL L L NN++ N++ I
Sbjct: 92 LDLSFNNIEAIEGLDTLVNLEDLSLSNNRISKVDS--LDALVKLQVLSLGNNQISNMMNI 149
Query: 107 DPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKERMEAASLFASEEMEEE 166
L P L+ LSL N +++ Y++++ L L LDF++ E+M E
Sbjct: 150 IYLRRFPCLRTLSLAGNPVSEAEEYKMFIYAYLSDLVYLDFRR---------VDEQMREM 200
Query: 167 AK 168
AK
Sbjct: 201 AK 202
>sp|B6D5P1|DAAF1_PERPL Dynein assembly factor 1, axonemal OS=Peromyscus polionotus
GN=Dnaaf1 PE=2 SV=1
Length = 622
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 13/154 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLRECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLD----FKKERMEAASL----FASEEME 164
LK L LD F K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|B6D5P3|DAAF1_PERLE Dynein assembly factor 1, axonemal OS=Peromyscus leucopus GN=Dnaaf1
PE=2 SV=1
Length = 622
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 13/154 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLRECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLD----FKKERMEAASL----FASEEME 164
LK L LD F K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q4R6X9|LRC48_MACFA Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis
GN=LRRC48 PE=2 SV=1
Length = 523
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 22 RELDLRGNKIAVIENLGATED--QFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI 79
R+L L N +IE +G E+ +DLS N I +E + L L L + NNRI++I
Sbjct: 68 RKLQLDNN---IIEKIGGLENLTHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI 124
Query: 80 NPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKL 139
+ + L KL L L NN++ N++ I L L+ LSL N I++ +Y++++ L
Sbjct: 125 DS--LDALVKLQVLSLGNNQIDNMMNIVYLRRFQCLRTLSLSGNPISEAEDYKMFICAYL 182
Query: 140 KSLRVLDFK------KERMEAASLFASEEM 163
L LDF+ KE EA ++ +E+
Sbjct: 183 PDLVYLDFRRIDDHTKELAEAKHQYSIDEL 212
>sp|Q9H069|LRC48_HUMAN Leucine-rich repeat-containing protein 48 OS=Homo sapiens GN=LRRC48
PE=2 SV=2
Length = 523
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 4 LTADLIWKSPHFFNAIKERELDLRGN---KIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
L D +W+ + R+L L N KI +ENL +DLS N I +E +
Sbjct: 56 LRIDNLWQFENL------RKLQLDNNIIEKIEGLENLA----HLVWLDLSFNNIETIEGL 105
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L L L + NNRI++I+ + L KL L L NNR+ N++ I L L+ LSL
Sbjct: 106 DTLVNLEDLSLFNNRISKIDS--LDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSL 163
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKK 149
N I++ +Y++++ L L LD+++
Sbjct: 164 SRNPISEAEDYKMFICAYLPDLMYLDYRR 192
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEI 106
++LS N+I K+E + ++ L L + N I I + L L L L N++ +L ++
Sbjct: 152 LNLSYNKISKIEGLENMCNLQKLNLAGNEIEHIPVWFAKKLKSLRVLNLKGNKISSLQDV 211
Query: 107 DPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEE 162
L L L L L+DN + P+Y ++I L+SL L+ + ++R EA F+ EE
Sbjct: 212 SKLKPLQDLTSLVLIDNPVVALPHYLQFIIFHLRSLESLEGQPVTTQDRQEAFERFSLEE 271
Query: 163 MEEEAKKESMKTLMPVEVPN 182
+E K KT+ E+ N
Sbjct: 272 IERLEKDLEKKTVETEELKN 291
>sp|Q8NEP3|DAAF1_HUMAN Dynein assembly factor 1, axonemal OS=Homo sapiens GN=DNAAF1 PE=1
SV=5
Length = 725
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 13/156 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +N + +
Sbjct: 154 RCLFLQMNLLRKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNHLETVED 212
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N+L + + L S+P L+ L+L+ N + ++ PNYR V +
Sbjct: 213 IQHLQECL-RLCVLDLSHNKLSDPEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVR 271
Query: 139 LKSLRVLD----FKKERMEAASL----FASEEMEEE 166
LK L LD F K+R A + +A+E+ E +
Sbjct: 272 LKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEERQ 307
>sp|Q9D9B4|CJ011_MOUSE Leucine-rich repeat-containing protein C10orf11 homolog OS=Mus
musculus PE=2 SV=1
Length = 229
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 81/182 (44%), Gaps = 40/182 (21%)
Query: 35 ENLGATEDQF-DTIDLSDNEIVKLENMPHLNRLGTLIINNNRITR--INPNIGEFLPKLH 91
E+LG F +DLS N + LE + L LI++NN + + P LP LH
Sbjct: 23 EHLGRDFGHFAKRLDLSFNLLRSLEGLSAFRSLEELILDNNLLGDDLVLPG----LPHLH 78
Query: 92 TLVLTNNRLVNL-VEIDPLTSL-PKLQFLSLLDNSITKKPN--------------YRLYV 135
TL L N++ +L +D L + P L++LSLL N PN YR +V
Sbjct: 79 TLTLNKNQITDLEYLLDHLAEVTPSLEYLSLLGNVAC--PNELVNLEKDEEDYKRYRCFV 136
Query: 136 IHKLKSLRVLDFKKERMEAASLFASEEMEEEAKKESMKTLMPVEVPNVSEEEEQQTPKVV 195
+HKL L+ LD +K +E EE + + M V P S EEE K
Sbjct: 137 LHKLPKLKFLDAQK--------VTRQEREEALVRGAF---MKVVKPKASSEEE----KAA 181
Query: 196 AP 197
AP
Sbjct: 182 AP 183
>sp|Q7PK92|DAAF1_ANOGA Dynein assembly factor 1, axonemal homolog OS=Anopheles gambiae
GN=AGAP009594 PE=3 SV=2
Length = 910
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L L N I+ I L + Q + L +N I K+EN+ H +L TL +++N I +I
Sbjct: 47 LWLECNAISNISGLDH-QSQLRCLYLHNNLIKKIENLQHCKQLDTLNLSHNHIAKIENCG 105
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLY-VIHKLKSL 142
+ LP L+TL +++N L + I+ L L K F+S+LD S + + + V+ +K L
Sbjct: 106 SDILPVLNTLNISHNYLKS---IESLAELRKCDFVSVLDISHNRIEDIAIVKVLADMKGL 162
Query: 143 RVL 145
RVL
Sbjct: 163 RVL 165
>sp|O35125|LRC23_MOUSE Leucine-rich repeat-containing protein 23 OS=Mus musculus GN=Lrrc23
PE=2 SV=1
Length = 340
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+LRGN++ + G + + L+ N + K+E + +L+ L TL + +N+I +N
Sbjct: 181 LELRGNQLESTK--GIYLPKLKNLYLAQNLLKKVEGLENLSNLTTLHLRDNQIETLN-GF 237
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
+ + L L L +N + +L E+ L LPKL+ L LLDN + +YR + ++ L
Sbjct: 238 SQEMKSLQYLNLRSNMISDLAELAKLRDLPKLRALVLLDNPCADETDYRQEALVQMAHLE 297
Query: 144 VLDFKKERMEAASLFASEEMEEEAKKE 170
LD KE E +EE+ + K+E
Sbjct: 298 RLD--KEFYEDDDRAEAEEIRQRLKEE 322
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 49 LSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDP 108
S N+I+ E + H RLG+L + NRI ++ E L LHTL L N+L + I
Sbjct: 138 FSYNQIIDTEGIFH-PRLGSLDLKGNRIHQVTGLDPERLSSLHTLELRGNQLESTKGI-- 194
Query: 109 LTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKERMEAASLFASE 161
LPKL+ L L N + K + L +L L + ++E + F+ E
Sbjct: 195 --YLPKLKNLYLAQNLLKKVEG-----LENLSNLTTLHLRDNQIETLNGFSQE 240
>sp|Q3SYS4|DAAF1_BOVIN Dynein assembly factor 1, axonemal OS=Bos taurus GN=DNAAF1 PE=2
SV=2
Length = 643
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 37/182 (20%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L N I IENL A + + + L N + K+EN+ L +L L I+NN I I
Sbjct: 132 RCLWLECNGIQKIENLEA-QTELRCLFLQVNLLHKIENLEPLQKLDALNISNNYIKTIE- 189
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEI--------------------DP-----LTSLPKLQ 116
N+ LP L+TL + +N L + +I DP L S+P L+
Sbjct: 190 NLS-CLPVLNTLQMAHNHLETVEDIQHLRECARLCVLDLSHNKLSDPEILRVLESMPDLR 248
Query: 117 FLSLLDNSITKK-PNYRLYVIHKLKSLRVLD----FKKERMEAASL----FASEEMEEEA 167
L+L+ N + K PNYR + +LK L LD F K+R A + +A+E+ E +
Sbjct: 249 VLNLMGNPVIKNIPNYRRILTVRLKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEERQQ 308
Query: 168 KK 169
++
Sbjct: 309 RE 310
>sp|Q7Z7A1|CNTRL_HUMAN Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2
Length = 2325
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+L N I IE L + ++LS N+I K+E + ++ L L + N I I +
Sbjct: 130 LNLSYNLIGKIEKLDKL-LKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWL 188
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
G+ L L L L N++ +L +I L L L L L++N + P+Y + I L+SL
Sbjct: 189 GKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLE 248
Query: 144 VLDFK----KERMEAASLFASEEME 164
L+ + ++R EA F+ EE+E
Sbjct: 249 SLEGQPVTTQDRQEAFERFSLEEVE 273
>sp|Q3T0W4|PP1R7_BOVIN Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7
PE=1 SV=1
Length = 360
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
RELDL N+I IENL A + + +D+S N + +E + L RL L + NN+I +I
Sbjct: 123 RELDLYDNQIRRIENLDALT-ELEVLDISFNLLRNIEGIDKLTRLKKLFLVNNKINKI-E 180
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKS 141
NI L +L L L +NR+ + ID LT+L L FL N ITK N + L +
Sbjct: 181 NISS-LHQLQMLELGSNRIRAIENIDTLTNLESL-FLG--KNKITKLQN-----LDALTN 231
Query: 142 LRVLDFKKERM 152
L VL + R+
Sbjct: 232 LTVLSMQSNRL 242
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
++L L NKI IEN+ + Q ++L N I +EN+ L L +L + N+IT++
Sbjct: 167 KKLFLVNNKINKIENISSLH-QLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKL-Q 224
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSI 125
N+ + L L L + +NR L +I+ L SL L+ L L N I
Sbjct: 225 NL-DALTNLTVLSMQSNR---LTKIEGLQSLVNLRELYLSHNGI 264
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+L N+I IEN+ T +++ L N+I KL+N+ L L L + +NR+T+I
Sbjct: 191 LELGSNRIRAIENID-TLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEG-- 247
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPN 130
+ L L L L++N + I+ L + KL L + N I K N
Sbjct: 248 LQSLVNLRELYLSHN---GIEVIEGLDNNNKLTMLDIASNRIKKIEN 291
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 23 ELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPN 82
++DL +I IE + + T+ L N I +EN+ L L L + +N+I RI N
Sbjct: 80 DVDLNHYRIGKIEGFEVLK-KVKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRI-EN 137
Query: 83 IGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSL 142
+ + L +L L ++ N L N+ ID LT L K L L++N I K N I L L
Sbjct: 138 L-DALTELEVLDISFNLLRNIEGIDKLTRLKK---LFLVNNKINKIEN-----ISSLHQL 188
Query: 143 RVLDFKKERMEA 154
++L+ R+ A
Sbjct: 189 QMLELGSNRIRA 200
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
REL L N I VIE L ++ +D++ N I K+EN+ HL L +N+N + +
Sbjct: 255 RELYLSHNGIEVIEGLD-NNNKLTMLDIASNRIKKIENVSHLTELQEFWMNDNLLDCWS- 312
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKS 141
++D L L+ + L N + + P YR ++ L S
Sbjct: 313 -----------------------DLDELKGARSLETVYLERNPLQRDPQYRRKIMLALPS 349
Query: 142 LRVLD 146
+R +D
Sbjct: 350 VRQID 354
>sp|Q6FV04|RU2A_CANGA U2 small nuclear ribonucleoprotein A' OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=LEA1 PE=3 SV=1
Length = 266
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L G+ IA+ +L +DL++N++V ++ H + + TL+++ NR+ ++
Sbjct: 32 RNLGLEGDDIAMPASLNHLAKPTHILDLTNNDLVFFPDLHHRDDIETLLLSKNRLMVLD- 90
Query: 82 NIGEFLP-KLHTLVLTNNRLVNLVEIDPLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKL 139
LP KL +L L N + N + PL+ P ++ L L+ N I YR ++ +
Sbjct: 91 --AALLPSKLKSLSLAFNGIENFETLIPLSHCPSTVRDLVLIGNPICHLSEYRQRILALV 148
Query: 140 KSLRVLDFK 148
SL VLDFK
Sbjct: 149 PSLEVLDFK 157
>sp|Q501X2|CEP72_DANRE Centrosomal protein of 72 kDa OS=Danio rerio GN=cep72 PE=2 SV=2
Length = 532
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 33/158 (20%)
Query: 22 RELDLRGNKIAVIENLGATEDQF---DTIDLSDNEIVKLENMPHLNRLGTLIINNNRITR 78
R L L G I +LG + F ++DLS N +V ++ + HL
Sbjct: 28 RSLTLPGTYEGKICHLGTSLKNFVRLKSLDLSYNALVTVQGIEHL--------------- 72
Query: 79 INPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIH 137
E L +L+ L NRL +L +I L L L+ L L N + KK P+YRLY++H
Sbjct: 73 ------ELLERLN---LYYNRLASLQDIFSLHKLQNLKELDLRLNPVVKKHPHYRLYLVH 123
Query: 138 KLKSLRVLD----FKKERMEAASLFASEE-MEEEAKKE 170
+ LR LD +ER A F+SEE ++ + KK+
Sbjct: 124 AIPKLRRLDDCPVRDRERKAALMHFSSEENLDSDYKKQ 161
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 22 RELDLRGNKIAVI-ENLGATEDQFDTIDLSDNEIVKLEN--MPHLNRLGTLIINNNRITR 78
+ LDLR N I + N + Q T+ L+DNE+ L++ + L L + +NNNR++R
Sbjct: 55 QTLDLRFNHIEELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSR 114
Query: 79 INPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHK 138
+ I + +P+L + L NN + L +LP+L L + +N +T+ P ++
Sbjct: 115 LPATIFQRMPRLEAIFLENNDIWQL-PAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNN 173
Query: 139 LKSLRV 144
LK LR+
Sbjct: 174 LKRLRL 179
>sp|Q16RY9|DAAF1_AEDAE Dynein assembly factor 1, axonemal homolog OS=Aedes aegypti
GN=AAEL010772 PE=3 SV=1
Length = 1107
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 7 DLIWKSPHFFNAIKERE-------LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN 59
D+++ + +NAI+ E L L N I+ I+ L + + + L +N I K+EN
Sbjct: 37 DILYLNYSGYNAIESLEEYVGLKCLWLECNAISEIKGL-EYQTELKCLYLQNNLITKIEN 95
Query: 60 MPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLS 119
+ +L TL +++N ITRI + LP L+TL L++N L D L L F+S
Sbjct: 96 LDSCKQLDTLNLSHNHITRIENCGHDILPVLNTLNLSHNYLKT---ADNLDHLRHCNFVS 152
Query: 120 LLDNSITKKPNYRLY-VIHKLKSLRVL 145
+LD S + + + ++ +K LRVL
Sbjct: 153 VLDLSHNRIEDIAIVKILGGMKELRVL 179
>sp|Q5ZMN0|AN32B_CHICK Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Gallus gallus GN=ANP32B PE=2 SV=1
Length = 262
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 3 RLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPH 62
RLT +L K P +KE LD + I L + + + + + + ++ + N+P
Sbjct: 6 RLTLELRNKKP---GEVKELVLDNCRSDDGKIVGLSSDFENLEFLSMINVNLLSISNLPK 62
Query: 63 LNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLD 122
LN+L L +++NRI+ + E P L L L+ N++ ++ ++PL LP L L L +
Sbjct: 63 LNKLRKLELSDNRISGGLEVLAERTPNLTHLNLSGNKIKDINTLEPLKKLPNLHSLDLFN 122
Query: 123 NSITKKPNYRLYVIHKLKSLRVLD-FKKERMEA 154
+T NYR V L L LD F + EA
Sbjct: 123 CEVTMLINYRESVFTLLPQLTYLDGFDADEQEA 155
>sp|A6H759|LRC72_BOVIN Leucine-rich repeat-containing protein 72 OS=Bos taurus GN=LRRC72
PE=2 SV=1
Length = 288
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 56 KLENMPHLNR---LGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNL-VEIDPLTS 111
KL + L R L L +NNN I I +LP LH L+L +N L+NL + L
Sbjct: 79 KLHGITFLTRNYCLAELYLNNNAIFDIEG--LHYLPSLHILLLHHNELINLDATVKELKG 136
Query: 112 LPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLD----FKKERMEAASLF 158
+ L+ L+L N + + YRLY+I+ L + +LD +KER +LF
Sbjct: 137 MLNLKTLTLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERRSMITLF 187
>sp|A0JM56|LRRC9_XENTR Leucine-rich repeat-containing protein 9 OS=Xenopus tropicalis
GN=lrrc9 PE=2 SV=2
Length = 1502
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R N + IE L + + ++L DN I KLE + L +L L INNN + +
Sbjct: 920 RWASFSSNHLTKIEGLEHCVN-LEELNLDDNSISKLEGLSKLTKLRRLSINNNLLAGFDR 978
Query: 82 NIGEFLPKLHTLVLTNNRLVNLV----------------------EIDPLTSLPKLQFLS 119
++ E L LH L NN + +L EI L L L L
Sbjct: 979 HVIESLSHLHFLSAENNNISSLAGLQRGYKLIELYLSNNCISSNQEIYSLKGLNNLVILD 1038
Query: 120 LLDNSI-TKKPNYRLYVIHKLKSLRVLD 146
+ N I K NYRL+VI L +++ LD
Sbjct: 1039 MWGNPILLKHENYRLFVIFHLSAIKALD 1066
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 12 SPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLII 71
S HF +EL + ++ I+ L D + L NEI +E + +L +L L +
Sbjct: 74 SCHFL-----KELWITECHLSKIQGLHHCAD-LQKLYLYHNEISVIEGLENLLKLEVLWL 127
Query: 72 NNNRITRINP------------------NIGEFLP---KLHTLVLTNNRLVNLVEIDPLT 110
NNN+I I +IGE L +L L L+ N++ + E+ L
Sbjct: 128 NNNQINVIEGLDMMQNLKELNLANNLIHSIGESLDPNVQLERLNLSGNKISSFKELTNLA 187
Query: 111 SLPKLQFLSLLDNSITKKP-----NYRLYVIHKLKSLRVLD 146
LP L L L D + P NY ++V++ + L+ LD
Sbjct: 188 RLPSLMDLGLKDPQYSPNPVCLLCNYAIHVLYHIPQLQRLD 228
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
Query: 46 TIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVN--- 102
++ L NEI +E + +L L L++++NRI I L L +L L NRL +
Sbjct: 1238 SLYLQGNEISHVEGLENLQFLRELVLDHNRIKAIAETSFAKLNSLVSLNLEENRLRDLNN 1297
Query: 103 -------------------LVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
+ EI+ L +P L LS+ N I++KP R ++ +L++L+
Sbjct: 1298 LPPLLKLRKLLIGSNKIQEISEIEKLEVIPALVELSISGNPISRKPFLRNLLVVRLQNLQ 1357
Query: 144 VLD 146
+LD
Sbjct: 1358 ILD 1360
>sp|Q9C099|LRCC1_HUMAN Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Homo sapiens GN=LRRCC1 PE=1 SV=2
Length = 1032
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 29/155 (18%)
Query: 7 DLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRL 66
D IW H LDL N+I+ IE L T + T++LS N I K+E + L L
Sbjct: 62 DHIWNLQH---------LDLSSNQISRIEGLN-TLTKLCTLNLSCNLITKVEGLEELINL 111
Query: 67 GTLIINNNRITRINPNIGEFLP------KLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L ++ N I ++ +P KL + L +NR+ ++ + L + L FL+
Sbjct: 112 TRLNVSYNHI----DDLSGLIPLHGIKHKLRYIDLHSNRIDSIHHL--LQCMVGLHFLTN 165
Query: 121 L-------DNSITKKPNYRLYVIHKLKSLRVLDFK 148
L DN + + P YR ++ L LR+LD K
Sbjct: 166 LILEKDGDDNPVCRLPGYRAVILQTLPQLRILDCK 200
>sp|Q9Z2H4|LGR4_RAT Leucine-rich repeat-containing G-protein coupled receptor 4
OS=Rattus norvegicus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 23 ELDLRGNKIAVIENLGATE-DQFDTIDLSDNEI--VKLENMPHLNRLGTLIINNNRITRI 79
EL L GN +++I + + + L +N++ V E + L+ L +L ++ N IT +
Sbjct: 85 ELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSV 144
Query: 80 NPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKL 139
+ E L +L L L +N L V + PL++LP LQ L+L N+I+ P+ + L
Sbjct: 145 PEDSFEGLVQLRHLWLDDNSLTE-VPVRPLSNLPTLQALTLALNNISSIPD---FAFTNL 200
Query: 140 KSLRVLDFKKERMEAAS 156
SL VL ++++ S
Sbjct: 201 SSLVVLHLHNNKIKSLS 217
Score = 40.4 bits (93), Expect = 0.013, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 6 ADLIWKSPHFFNAIKERELDLRGNKIAVI-ENLGATEDQFDTIDLSDNEIVKLENMPHLN 64
A L+ P+ + L L G KI+ I ++L + T+DLS N I L +
Sbjct: 306 ASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCR 365
Query: 65 RLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNS 124
L + + N+I+ I N + L L L L+ N L+ + L + L + N
Sbjct: 366 ALEEISLQRNQISLIKENTFQGLTSLRILDLSRN-LIREIHSGAFAKLGTITNLDVSFNE 424
Query: 125 ITKKPNYRLYVIHKLKSLRVLDFKKERMEAASLFAS 160
+T P L +++LK V +FK + AA FA+
Sbjct: 425 LTSFPTEGLNGLNQLK--LVGNFKLKDALAARDFAN 458
Score = 34.3 bits (77), Expect = 1.1, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 21 ERELDLRGNKI-AVIENLGATEDQFDTIDLSDNEIVKL-----ENMPHLNRLGTLIINNN 74
+R +D G + AV E L A +D+S N I +L ++ P L L + N
Sbjct: 38 DRRVDCSGKGLTAVPEGLSAFTQ---ALDISMNNITQLPEDAFKSFPFLEELQ---LAGN 91
Query: 75 RITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKP 129
++ I+P L +L L L NN+L V + + L LQ L L N IT P
Sbjct: 92 DLSLIHPKALSGLKELKVLTLQNNQL-RTVPSEAIHGLSALQSLRLDANHITSVP 145
>sp|A6NJI9|LRC72_HUMAN Leucine-rich repeat-containing protein 72 OS=Homo sapiens GN=LRRC72
PE=2 SV=2
Length = 287
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 56 KLENMPHLNR---LGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNL-VEIDPLTS 111
KL + L R L L +NNN I I +LP LH L+L +N L N+ + L
Sbjct: 78 KLHGITFLTRNYCLTELYLNNNAIFEIEG--LHYLPSLHILLLHHNELTNIDATVKELKG 135
Query: 112 LPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLD----FKKERMEAASLF 158
+ L+ LSL N + + YRLY+I+ L + +LD +KER ++F
Sbjct: 136 MLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERRSMITIF 186
>sp|Q28FY0|TILB_XENTR Protein TILB homolog OS=Xenopus tropicalis GN=lrrc6 PE=2 SV=1
Length = 470
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 1 MVRLTADLIWKSPHFFNA--IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
MVR++ DLI + N E+ L + IE + + + L +N I K+E
Sbjct: 1 MVRVSEDLIRRRAEHNNCEIFSLEEISLHQQDLERIEYIDKWCRELKILYLQNNLIGKIE 60
Query: 59 NMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFL 118
N+ L +L L + N I +I N+ E L L LT N + +L I+ L +L+
Sbjct: 61 NVSKLKKLEYLNLALNNIEKIE-NL-EGCESLQKLDLTVNFVGDLSSINSLQENRQLREF 118
Query: 119 SLLDNSITKKPNYRLYVIHKLKSLRVLDFKK----ERMEAASLF 158
L+ N + YR YV+ L L+ LD K+ ER++AA +
Sbjct: 119 YLVGNPCAEYEGYRQYVVATLPQLKWLDGKEIERSERIQAAQDY 162
>sp|Q53EV4|LRC23_HUMAN Leucine-rich repeat-containing protein 23 OS=Homo sapiens GN=LRRC23
PE=2 SV=2
Length = 343
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
++LRGN++ LG + + L+ N + K+E + L+ L TL + +N+I ++
Sbjct: 184 VELRGNQLE--STLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLS-GF 240
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
+ L L L N + NL E+ L LPKL+ L LLDN T + +YR + ++ L
Sbjct: 241 SREMKSLQYLNLRGNMVANLGELAKLRDLPKLRALVLLDNPCTDETSYRQEALVQMPYLE 300
Query: 144 VLD 146
LD
Sbjct: 301 RLD 303
>sp|Q9Y2I1|NISCH_HUMAN Nischarin OS=Homo sapiens GN=NISCH PE=1 SV=3
Length = 1504
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP-- 81
LDL N ++ I+ + + +DLS N ++ ++N+ HL L L ++ N+++ +
Sbjct: 292 LDLSHNSVSEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKLSSLEGLH 351
Query: 82 -------------NIGEFLPKLHTLV------LTNNRLVNLVEIDPLTSLPKLQFLSLLD 122
N+ E L LH L L +NR+ + E+ + SLP L+ +SLL+
Sbjct: 352 TKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGSLPCLEHVSLLN 411
Query: 123 NSITKKPNYRLYVIHKL 139
N ++ P+YR V+ +
Sbjct: 412 NPLSIIPDYRTKVLAQF 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.131 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,184,670
Number of Sequences: 539616
Number of extensions: 4454282
Number of successful extensions: 19395
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 631
Number of HSP's that attempted gapping in prelim test: 17917
Number of HSP's gapped (non-prelim): 1668
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)