Your job contains 1 sequence.
>023444
MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP
GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ
GGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTASDVSEGDGSSDEISSQGDEHCH
FQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKD
EDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSRS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023444
(282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173802 - symbol:ERA1 "ENHANCED RESPONSE TO AB... 871 3.7e-87 1
UNIPROTKB|P49355 - symbol:FNTB "Protein farnesyltransfera... 409 4.8e-60 2
UNIPROTKB|B4DL54 - symbol:CHURC1-FNTB "cDNA FLJ59570, hig... 399 1.6e-59 2
UNIPROTKB|B4E1A0 - symbol:CHURC1-FNTB "cDNA FLJ58825, hig... 399 1.6e-59 2
UNIPROTKB|H0YHI0 - symbol:CHURC1-FNTB "Protein CHURC1-FNT... 399 1.6e-59 2
UNIPROTKB|P49356 - symbol:FNTB "Protein farnesyltransfera... 399 1.6e-59 2
RGD|620119 - symbol:Fntb "farnesyltransferase, CAAX box, ... 400 2.0e-59 2
UNIPROTKB|Q02293 - symbol:Fntb "Protein farnesyltransfera... 400 2.0e-59 2
ZFIN|ZDB-GENE-030131-2220 - symbol:fntb "farnesyltransfer... 405 4.2e-59 2
UNIPROTKB|F1Q0W7 - symbol:FNTB "Uncharacterized protein" ... 399 5.4e-59 2
MGI|MGI:1861305 - symbol:Fntb "farnesyltransferase, CAAX ... 400 6.9e-59 2
UNIPROTKB|F1SA56 - symbol:CHURC1-FNTB "Uncharacterized pr... 397 8.8e-59 2
FB|FBgn0038424 - symbol:CG17565 species:7227 "Drosophila ... 388 3.3e-55 2
WB|WBGene00006465 - symbol:fntb-1 species:6239 "Caenorhab... 383 6.8e-51 2
UNIPROTKB|Q19752 - symbol:fntb-1 "Protein FNTB-1" species... 383 6.8e-51 2
GENEDB_PFALCIPARUM|PF11_0483 - symbol:PF11_0483 "farnesyl... 345 1.6e-46 2
UNIPROTKB|Q8IHP6 - symbol:PF11_0483 "Farnesyltransferase ... 345 1.6e-46 2
DICTYBASE|DDB_G0270948 - symbol:fntB "protein farnesyltra... 386 1.2e-45 2
SGD|S000002248 - symbol:RAM1 "Beta subunit of the CAAX fa... 338 8.5e-43 2
UNIPROTKB|B3KSC2 - symbol:CHURC1-FNTB "cDNA FLJ35979 fis,... 233 4.6e-42 2
POMBASE|SPAC17G6.04c - symbol:cpp1 "protein farnesyltrans... 321 1.5e-41 2
CGD|CAL0001670 - symbol:RAM1 species:5476 "Candida albica... 185 3.5e-36 3
UNIPROTKB|Q59LD0 - symbol:RAM1 "Putative uncharacterized ... 185 3.5e-36 3
ASPGD|ASPL0000050108 - symbol:AN2002 species:162425 "Emer... 285 9.8e-36 2
CGD|CAL0000126 - symbol:BET2 species:5476 "Candida albica... 243 3.2e-28 2
DICTYBASE|DDB_G0290671 - symbol:rabggtb "protein geranylg... 239 3.6e-27 2
ASPGD|ASPL0000011885 - symbol:AN3747 species:162425 "Emer... 231 6.4e-26 2
TAIR|locus:2039752 - symbol:PGGT-I species:3702 "Arabidop... 251 8.5e-26 2
TAIR|locus:2177058 - symbol:RGTB1 "RAB geranylgeranyl tra... 230 4.4e-25 2
TAIR|locus:2088614 - symbol:RGTB2 "RAB geranylgeranyl tra... 232 7.1e-25 2
SGD|S000006380 - symbol:BET2 "Beta subunit of Type II ger... 220 1.5e-24 2
FB|FBgn0028970 - symbol:betaggt-II "beta subunit of type ... 208 3.4e-24 2
UNIPROTKB|G4MQQ5 - symbol:MGG_09304 "Type-2 protein geran... 199 9.3e-24 2
POMBASE|SPAC167.02 - symbol:ptb1 "geranylgeranyltransfera... 203 2.3e-23 2
UNIPROTKB|P53611 - symbol:RABGGTB "Geranylgeranyl transfe... 208 2.4e-22 2
WB|WBGene00015099 - symbol:ggtb-1 species:6239 "Caenorhab... 209 2.6e-22 2
UNIPROTKB|G8JKY6 - symbol:RABGGTB "Geranylgeranyl transfe... 208 3.0e-22 2
UNIPROTKB|Q5E9B3 - symbol:RABGGTB "Geranylgeranyl transfe... 208 3.0e-22 2
UNIPROTKB|F1P6X0 - symbol:RABGGTB "Uncharacterized protei... 208 3.0e-22 2
RGD|3530 - symbol:Rabggtb "Rab geranylgeranyltransferase,... 208 3.0e-22 2
UNIPROTKB|F1LSM6 - symbol:Rabggtb "Geranylgeranyl transfe... 208 3.0e-22 2
UNIPROTKB|F1M052 - symbol:Rabggtb "Geranylgeranyl transfe... 208 3.8e-22 2
MGI|MGI:99537 - symbol:Rabggtb "RAB geranylgeranyl transf... 208 4.1e-22 2
ZFIN|ZDB-GENE-040426-2116 - symbol:rabggtb "Rab geranylge... 205 5.7e-22 2
UNIPROTKB|F1P4E5 - symbol:RABGGTB "Uncharacterized protei... 206 1.3e-21 2
GENEDB_PFALCIPARUM|PFF0120w - symbol:PFF0120w "putative g... 204 3.4e-21 2
FB|FBgn0015000 - symbol:betaggt-I "beta subunit of type I... 217 2.2e-17 1
UNIPROTKB|E2QZU5 - symbol:PGGT1B "Uncharacterized protein... 212 6.7e-17 1
UNIPROTKB|Q5EAD5 - symbol:PGGT1B "Geranylgeranyl transfer... 211 8.7e-17 1
UNIPROTKB|F1RLE8 - symbol:PGGT1B "Uncharacterized protein... 206 1.2e-16 1
MGI|MGI:1917514 - symbol:Pggt1b "protein geranylgeranyltr... 206 3.2e-16 1
RGD|621754 - symbol:Pggt1b "protein geranylgeranyltransfe... 206 3.2e-16 1
UNIPROTKB|P53610 - symbol:Pggt1b "Geranylgeranyl transfer... 206 3.2e-16 1
UNIPROTKB|P53609 - symbol:PGGT1B "Geranylgeranyl transfer... 205 4.1e-16 1
UNIPROTKB|O18197 - symbol:Y48E1B.3 "Protein Y48E1B.3, iso... 204 4.4e-16 1
UNIPROTKB|F1NE58 - symbol:PGGT1B "Uncharacterized protein... 198 1.5e-15 1
UNIPROTKB|D3DQ78 - symbol:RABGGTB "Geranylgeranyl transfe... 145 1.6e-15 2
UNIPROTKB|F1N4H5 - symbol:PGGT1B "Geranylgeranyl transfer... 199 1.9e-15 1
WB|WBGene00013002 - symbol:Y48E1B.3 species:6239 "Caenorh... 204 3.2e-15 1
ZFIN|ZDB-GENE-050913-85 - symbol:pggt1b "protein geranylg... 184 1.3e-14 2
DICTYBASE|DDB_G0269726 - symbol:pggt1b "protein geranylge... 189 1.2e-13 1
POMBASE|SPAC2E1P5.04c - symbol:cwg2 "geranylgeranyltransf... 133 2.4e-13 3
CGD|CAL0001576 - symbol:CDC43 species:5476 "Candida albic... 87 4.3e-05 2
UNIPROTKB|Q59KC5 - symbol:CDC43 "Putative uncharacterized... 87 4.3e-05 2
SGD|S000003123 - symbol:CDC43 "Beta subunit of geranylger... 105 0.00099 2
>TAIR|locus:2173802 [details] [associations]
symbol:ERA1 "ENHANCED RESPONSE TO ABA 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IMP] [GO:0005965 "protein farnesyltransferase complex"
evidence=IMP] [GO:0018342 "protein prenylation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0009414
GO:GO:0042127 GO:GO:0009788 GO:GO:0018343 EMBL:AB010699
GO:GO:0009934 eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 GO:GO:0018342 EMBL:AF214106 EMBL:BT030457 EMBL:U46574
EMBL:U44849 IPI:IPI00543310 RefSeq:NP_198844.1 UniGene:At.9205
ProteinModelPortal:Q38920 SMR:Q38920 IntAct:Q38920 STRING:Q38920
PaxDb:Q38920 PRIDE:Q38920 EnsemblPlants:AT5G40280.1 GeneID:834026
KEGG:ath:AT5G40280 TAIR:At5g40280 HOGENOM:HOG000190594
InParanoid:Q38920 KO:K05954 OMA:QDASQPW ProtClustDB:PLN02710
BioCyc:ARA:AT5G40280-MONOMER BioCyc:MetaCyc:AT5G40280-MONOMER
ArrayExpress:Q38920 Genevestigator:Q38920 GermOnline:AT5G40280
PANTHER:PTHR11774:SF6 Uniprot:Q38920
Length = 482
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 170/290 (58%), Positives = 206/290 (71%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
MKD SG FRMHD GE+DVRACYTAISVASILNI+DDEL Q +G+YILSCQTYEGGI GEP
Sbjct: 192 MKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEP 251
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSEAHGGYT+CGLAAMILINE DRL+LD+L+ W V RQGVE GFQGRTNKLVDGCY+FWQ
Sbjct: 252 GSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQ 311
Query: 121 GGVFALLRRF-----HSIIGESPTP--VDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXX 173
LL+R H + G S ++ D+ + +
Sbjct: 312 AAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNG 371
Query: 174 XXXXHCH-FQHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSI 232
H + +R + +F S+ LQRY+LLCS+ P GG RDK RKPRD+YHTCYCLSGLS+
Sbjct: 372 HRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSV 431
Query: 233 CQHSWLKDEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSRS 282
QH+WLKDED+ PL R ++G YSN+LEPV + NIV+D+Y+EA EFF ++
Sbjct: 432 AQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIEFFFKA 481
>UNIPROTKB|P49355 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9913 "Bos taurus" [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0008285
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 eggNOG:COG5029 GO:GO:0004311
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 EMBL:L00633 EMBL:BC123393 IPI:IPI00705098
PIR:C49274 RefSeq:NP_786999.1 UniGene:Bt.4529
ProteinModelPortal:P49355 SMR:P49355 STRING:P49355
Ensembl:ENSBTAT00000007751 GeneID:327686 KEGG:bta:327686 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 InParanoid:P49355
OMA:HPVYNIC OrthoDB:EOG4KKZ33 BindingDB:P49355 ChEMBL:CHEMBL4671
NextBio:20810151 Uniprot:P49355
Length = 437
Score = 409 (149.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 74/130 (56%), Positives = 93/130 (71%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MHD GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 224 (83.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPTGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 415
Score = 82 (33.9 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQNVGN----YILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q V ++ CQ+ EGG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQMVATDVCQFLELCQSPEGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVEGGF 104
G H T+ + A+ +I EA D ++ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSF 191
Score = 61 (26.5 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 26/135 (19%), Positives = 47/135 (34%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILD--DEL-LQNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + D + + + Y+ S + +G
Sbjct: 134 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLM 193
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 194 HDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 119 WQGGVFALLRRFHSI 133
+L++ S+
Sbjct: 254 CGLAALVILKKERSL 268
Score = 50 (22.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSRWMFHQQALQ 336
>UNIPROTKB|B4DL54 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ59570, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 HOVERGEN:HBG008173 OMA:HPVYNIC
UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960
EMBL:AK296850 IPI:IPI00909112 RefSeq:NP_001189488.1 SMR:B4DL54
STRING:B4DL54 Ensembl:ENST00000447296 GeneID:100529261
KEGG:hsa:100529261 UCSC:uc010tsl.2 CTD:100529261
GenomeRNAi:100529261 Uniprot:B4DL54
Length = 471
Score = 399 (145.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 73/130 (56%), Positives = 91/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 218 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 277
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 278 GMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 337
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 338 QAGLLPLLHR 347
Score = 229 (85.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 363 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 418
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A +F
Sbjct: 419 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 449
Score = 82 (33.9 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ EGG G P
Sbjct: 119 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGP 178
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGVEGGF 104
G H T+ + A+ +I + D+ + L+ ++ + +G F
Sbjct: 179 GQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSF 225
Score = 63 (27.2 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 26/135 (19%), Positives = 48/135 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL--QNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + +++ + + Y+ S + +G
Sbjct: 168 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 227
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 228 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 287
Query: 119 WQGGVFALLRRFHSI 133
+L+R S+
Sbjct: 288 CGLAALVILKRERSL 302
Score = 49 (22.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 285 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 343
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 344 LLHRALHAQGDPALSMSHWMFHQQALQ 370
>UNIPROTKB|B4E1A0 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ58825, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6
HOVERGEN:HBG008173 UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745
HGNC:HGNC:42960 GeneID:100529261 KEGG:hsa:100529261 CTD:100529261
GenomeRNAi:100529261 EMBL:AK303739 IPI:IPI00984229
RefSeq:NP_001189487.1 SMR:B4E1A0 STRING:B4E1A0
Ensembl:ENST00000542227 UCSC:uc010tsm.2 Uniprot:B4E1A0
Length = 391
Score = 399 (145.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 73/130 (56%), Positives = 91/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 138 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 197
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 198 GMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 257
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 258 QAGLLPLLHR 267
Score = 229 (85.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 283 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 338
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A +F
Sbjct: 339 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 369
Score = 82 (33.9 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ EGG G P
Sbjct: 39 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGP 98
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGVEGGF 104
G H T+ + A+ +I + D+ + L+ ++ + +G F
Sbjct: 99 GQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSF 145
Score = 63 (27.2 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 26/135 (19%), Positives = 48/135 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL--QNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + +++ + + Y+ S + +G
Sbjct: 88 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 147
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 148 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 207
Query: 119 WQGGVFALLRRFHSI 133
+L+R S+
Sbjct: 208 CGLAALVILKRERSL 222
Score = 49 (22.3 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 205 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 263
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 264 LLHRALHAQGDPALSMSHWMFHQQALQ 290
>UNIPROTKB|H0YHI0 [details] [associations]
symbol:CHURC1-FNTB "Protein CHURC1-FNTB" species:9606 "Homo
sapiens" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6 OMA:HPVYNIC
EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960 Ensembl:ENST00000549987
Uniprot:H0YHI0
Length = 472
Score = 399 (145.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 73/130 (56%), Positives = 91/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 219 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 278
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 279 GMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 338
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 339 QAGLLPLLHR 348
Score = 229 (85.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 364 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 419
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A +F
Sbjct: 420 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 450
Score = 82 (33.9 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ EGG G P
Sbjct: 120 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGP 179
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGVEGGF 104
G H T+ + A+ +I + D+ + L+ ++ + +G F
Sbjct: 180 GQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSF 226
Score = 63 (27.2 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 26/135 (19%), Positives = 48/135 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL--QNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + +++ + + Y+ S + +G
Sbjct: 169 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 228
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 229 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 288
Query: 119 WQGGVFALLRRFHSI 133
+L+R S+
Sbjct: 289 CGLAALVILKRERSL 303
Score = 49 (22.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 286 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 344
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 345 LLHRALHAQGDPALSMSHWMFHQQALQ 371
>UNIPROTKB|P49356 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0004660
"protein farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0005875 GO:GO:0008285
EMBL:CH471061 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008270 GO:GO:0034097 GO:GO:0014070
GO:GO:0042277 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 PDB:1JCQ PDB:1LD7 PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4
PDB:1TN6 PDB:2F0Y PDB:2H6F PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ
PDB:3E37 PDBsum:1JCQ PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC
PDBsum:1S63 PDBsum:1SA4 PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F
PDBsum:2H6G PDBsum:2H6H PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37
GO:GO:0019840 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
HOVERGEN:HBG008173 OrthoDB:EOG4KKZ33 EMBL:L00635 EMBL:AK315714
EMBL:BC020232 EMBL:L10414 IPI:IPI00026817 PIR:B49274
RefSeq:NP_002019.1 UniGene:Hs.325531 ProteinModelPortal:P49356
SMR:P49356 IntAct:P49356 MINT:MINT-238879 STRING:P49356
PhosphoSite:P49356 DMDM:1346696 PeptideAtlas:P49356 PRIDE:P49356
DNASU:2342 Ensembl:ENST00000246166 GeneID:2342 KEGG:hsa:2342
UCSC:uc001xia.3 GeneCards:GC14P065454 HGNC:HGNC:3785 MIM:134636
neXtProt:NX_P49356 PharmGKB:PA28202 InParanoid:P49356 OMA:YWIANSL
PhylomeDB:P49356 BindingDB:P49356 ChEMBL:CHEMBL272
EvolutionaryTrace:P49356 GenomeRNAi:2342 NextBio:9505
ArrayExpress:P49356 Bgee:P49356 CleanEx:HS_FNTB
Genevestigator:P49356 GermOnline:ENSG00000125954 Uniprot:P49356
Length = 437
Score = 399 (145.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 73/130 (56%), Positives = 91/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 229 (85.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A +F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 415
Score = 82 (33.9 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ EGG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGVEGGF 104
G H T+ + A+ +I + D+ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSF 191
Score = 63 (27.2 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 26/135 (19%), Positives = 48/135 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL--QNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + +++ + + Y+ S + +G
Sbjct: 134 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 119 WQGGVFALLRRFHSI 133
+L+R S+
Sbjct: 254 CGLAALVILKRERSL 268
Score = 49 (22.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>RGD|620119 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta" species:10116
"Rattus norvegicus" [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISO] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018343 "protein farnesylation"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0019840 "isoprenoid binding"
evidence=IDA] [GO:0042277 "peptide binding" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 RGD:620119
GO:GO:0005875 GO:GO:0008285 GO:GO:0043234 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0051770 eggNOG:COG5029
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D PDB:1D8E
PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR PDB:1JCS
PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1
PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L
PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34
PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO
PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP
PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR
PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N94
PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R
PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2
PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81 PDBsum:2BED
PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY
PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5
PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM
PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 400 (145.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 73/130 (56%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 227 (85.0 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
V+G NVL+P HPV+NI D+ +A F
Sbjct: 385 VVMGVPENVLQPTHPVYNIGPDKVIQATTHF 415
Score = 74 (31.1 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ +GG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVEGGF 104
G H T+ + A+ +I EA + ++ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSF 191
Score = 64 (27.6 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 30/139 (21%), Positives = 50/139 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDDE-LLQNVGNYILSCQTYEG 54
+ P G F + Y A++ I+ N+++ E LLQ Y+ S + +G
Sbjct: 134 QSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQ----YLYSLKQPDG 189
Query: 55 GIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDG 114
G E +C + L N + W+ Q EGG G G
Sbjct: 190 SFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHG 249
Query: 115 CYSFWQGGVFALLRRFHSI 133
Y+F +L++ S+
Sbjct: 250 GYTFCGLAALVILKKERSL 268
Score = 50 (22.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>UNIPROTKB|Q02293 [details] [associations]
symbol:Fntb "Protein farnesyltransferase subunit beta"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
RGD:620119 GO:GO:0005875 GO:GO:0008285 GO:GO:0043234
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0045787 GO:GO:0051770
eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D
PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR
PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A
PDB:1NI1 PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ
PDB:1QE2 PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI
PDB:2R2L PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33
PDB:3E34 PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM
PDB:4GTO PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E
PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7
PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR
PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4
PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ
PDBsum:1QE2 PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81
PDBsum:2BED PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS
PDBsum:3DPY PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34
PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ
PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 400 (145.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 73/130 (56%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 227 (85.0 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
V+G NVL+P HPV+NI D+ +A F
Sbjct: 385 VVMGVPENVLQPTHPVYNIGPDKVIQATTHF 415
Score = 74 (31.1 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ +GG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVEGGF 104
G H T+ + A+ +I EA + ++ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSF 191
Score = 64 (27.6 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 30/139 (21%), Positives = 50/139 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDDE-LLQNVGNYILSCQTYEG 54
+ P G F + Y A++ I+ N+++ E LLQ Y+ S + +G
Sbjct: 134 QSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQ----YLYSLKQPDG 189
Query: 55 GIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDG 114
G E +C + L N + W+ Q EGG G G
Sbjct: 190 SFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHG 249
Query: 115 CYSFWQGGVFALLRRFHSI 133
Y+F +L++ S+
Sbjct: 250 GYTFCGLAALVILKKERSL 268
Score = 50 (22.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>ZFIN|ZDB-GENE-030131-2220 [details] [associations]
symbol:fntb "farnesyltransferase, CAAX box, beta"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 ZFIN:ZDB-GENE-030131-2220
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:AL928866 EMBL:BX255891 EMBL:BC071443
IPI:IPI00492729 RefSeq:NP_001002128.1 UniGene:Dr.77794 SMR:Q6IQG3
STRING:Q6IQG3 Ensembl:ENSDART00000038149 GeneID:323500
KEGG:dre:323500 InParanoid:Q6IQG3 NextBio:20808280 Uniprot:Q6IQG3
Length = 419
Score = 405 (147.6 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 75/130 (57%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ L N+I+SCQ +EGG+ G P
Sbjct: 169 VKQPDGSFVMHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVP 228
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCG AA++++ + LDL AL+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 229 GLEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFW 288
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 289 QAGLLPLLHR 298
Score = 219 (82.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 46/93 (49%), Positives = 57/93 (61%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+F ALQ Y+LLC Q+P GGL DK K RD+YHT YCLSGLS+ QH KD +
Sbjct: 314 MFERKALQEYILLCCQNPGGGLLDKPGKSRDFYHTSYCLSGLSVAQHFGNKDLHNE---- 369
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSR 281
+LG N L P HPV+NI ++ A E+F R
Sbjct: 370 LILGRDENKLAPTHPVYNICPEKVARAVEYFHR 402
Score = 78 (32.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 29/136 (21%), Positives = 50/136 (36%)
Query: 4 PSGAFRMHDAGEIDVRACYTAISVASIL------NILDDELLQNVGNYILSCQTYEGGIA 57
P+G F + + Y A++ IL N+++ E L + ++ S + +G
Sbjct: 121 PTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLD---FLYSVKQPDGSFV 177
Query: 58 GEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYS 117
G E +C + L N D W++ Q EGG G G Y+
Sbjct: 178 MHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGGYT 237
Query: 118 FWQGGVFALLRRFHSI 133
F +L + H +
Sbjct: 238 FCGTAALVILGKEHML 253
Score = 72 (30.4 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDEL----LQNVGNYILSCQTYEGGIAGEP 60
G + DA E +D + + L +L++ + +V ++ CQ GG G P
Sbjct: 70 GLRHLSDAYECLDASRPWLCYWILHSLELLEEPVPAAVASDVCQFLARCQAPTGGFGGGP 129
Query: 61 GSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVEGGF 104
G +AH T+ + A+ ++ EA + ++ + L+ ++ + +G F
Sbjct: 130 GQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPDGSF 176
Score = 45 (20.9 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 18/92 (19%), Positives = 42/92 (45%)
Query: 16 IDVRACYTAISVASILNILDDELL--QNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCG 72
++ YT A+++ + + +L + + ++ S Q +EGG G G Y+F
Sbjct: 230 LEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQ 289
Query: 73 LAAMILINEADRLDLDALIG---WVVFRQGVE 101
+ L++ A + D+ + W+ R+ ++
Sbjct: 290 AGLLPLLHRALFKEGDSTLSVSSWMFERKALQ 321
>UNIPROTKB|F1Q0W7 [details] [associations]
symbol:FNTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965 KO:K05954
PANTHER:PTHR11774:SF6 CTD:2342 GeneTree:ENSGT00550000075042
OMA:HPVYNIC EMBL:AAEX03005789 RefSeq:XP_547857.2
Ensembl:ENSCAFT00000025678 GeneID:490735 KEGG:cfa:490735
Uniprot:F1Q0W7
Length = 437
Score = 399 (145.5 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 73/130 (56%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 224 (83.9 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 415
Score = 76 (31.8 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQNVGN----YILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q V ++ CQ+ EGG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQMVATDVCQFLELCQSPEGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILINEADR---LDLDALIGWVVFRQGVEGGF 104
G H T+ + A+ +I + ++ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYGVINREKLLQYLYSLKQPDGSF 191
Score = 56 (24.8 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 36 DELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVV 95
++LLQ Y+ S + +G G E +C + L N + W+
Sbjct: 175 EKLLQ----YLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 96 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 129
Q EGG G G Y+F +L++
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKK 264
Score = 50 (22.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 22 YTAISVASILNILDDELLQNVGN---YILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E N+ + ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERYLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>MGI|MGI:1861305 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=ISO] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0010035 "response to
inorganic substance" evidence=ISO] [GO:0014070 "response to organic
cyclic compound" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=ISO]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045787 "positive regulation of cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IMP] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
MGI:MGI:1861305 GO:GO:0005875 GO:GO:0008285 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144 GO:GO:0008270
GO:GO:0034097 GO:GO:0014070 GO:GO:0042277 GO:GO:0010035
GO:GO:0042060 GO:GO:0018343 GO:GO:0048146 GO:GO:0045787
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:3PZ4 PDBsum:3PZ4
GO:GO:0019840 HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
CTD:2342 GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173
OMA:HPVYNIC OrthoDB:EOG4KKZ33 EMBL:BC031417 IPI:IPI00169914
RefSeq:NP_666039.1 UniGene:Mm.151174 ProteinModelPortal:Q8K2I1
SMR:Q8K2I1 STRING:Q8K2I1 PhosphoSite:Q8K2I1 PRIDE:Q8K2I1
Ensembl:ENSMUST00000041008 GeneID:110606 KEGG:mmu:110606
UCSC:uc007nyu.1 InParanoid:Q8K2I1 BindingDB:Q8K2I1
ChEMBL:CHEMBL2631 ChiTaRS:FNTB NextBio:364317 Bgee:Q8K2I1
CleanEx:MM_FNTB Genevestigator:Q8K2I1 GermOnline:ENSMUSG00000033373
Uniprot:Q8K2I1
Length = 437
Score = 400 (145.9 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 73/130 (56%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 184 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVP 243
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 244 GMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 303
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 304 QAGLLPLLHR 313
Score = 222 (83.2 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 46/91 (50%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
V+G NVL+P HPV+NI ++ +A F
Sbjct: 385 MVMGVPENVLQPTHPVYNIGPEKVIQATTHF 415
Score = 74 (31.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 6 GAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVGNYILSCQTYEGGIAGEP 60
G ++ DA E +D + + L +LD+ + Q +V ++ CQ+ +GG G P
Sbjct: 85 GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGP 144
Query: 61 GSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVEGGF 104
G H T+ + A+ +I EA + ++ + L+ ++ + +G F
Sbjct: 145 GQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSF 191
Score = 64 (27.6 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 30/139 (21%), Positives = 50/139 (35%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDDE-LLQNVGNYILSCQTYEG 54
+ P G F + Y A++ I+ N+++ E LLQ Y+ S + +G
Sbjct: 134 QSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQ----YLYSLKQPDG 189
Query: 55 GIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDG 114
G E +C + L N + W+ Q EGG G G
Sbjct: 190 SFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHG 249
Query: 115 CYSFWQGGVFALLRRFHSI 133
Y+F +L++ S+
Sbjct: 250 GYTFCGLAALVILKKERSL 268
Score = 50 (22.7 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>UNIPROTKB|F1SA56 [details] [associations]
symbol:CHURC1-FNTB "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:CU655896 Ensembl:ENSSSCT00000002539 Uniprot:F1SA56
Length = 336
Score = 397 (144.8 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 73/130 (56%), Positives = 92/130 (70%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K P G+F MH GE+DVR+ Y A SVAS+ NI+ +L + +I CQ +EGGI G P
Sbjct: 83 LKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGVP 142
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFW 119
G EAHGGYTFCGLAA++++ + L+L +L+ WV RQ EGGFQGR NKLVDGCYSFW
Sbjct: 143 GMEAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFW 202
Query: 120 QGGVFALLRR 129
Q G+ LL R
Sbjct: 203 QAGLLPLLHR 212
Score = 224 (83.9 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 228 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 283
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A F
Sbjct: 284 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 314
Score = 75 (31.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 38 LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWV 94
L+ +V ++ CQ+ EGG G PG H T+ + A+ +I EA D ++ + L+ ++
Sbjct: 21 LVPSVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYL 80
Query: 95 VFRQGVEGGF 104
+ +G F
Sbjct: 81 YSLKQPDGSF 90
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 25/131 (19%), Positives = 45/131 (34%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILD--DEL-LQNVGNYILSCQTYEGGIAG 58
+ P G F + Y A++ I+ + D + + + Y+ S + +G
Sbjct: 33 QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLM 92
Query: 59 EPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
G E +C + L N + W+ Q EGG G G Y+F
Sbjct: 93 HVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 152
Query: 119 WQGGVFALLRR 129
+L++
Sbjct: 153 CGLAALVILKK 163
Score = 50 (22.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 22 YTAISVASILNILDDELLQNVGN---YILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E N+ + ++ S Q +EGG G G Y+F +
Sbjct: 150 YTFCGLAALV-ILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 208
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 209 LLHRALHAQGDPALSMSRWMFHQQALQ 235
>FB|FBgn0038424 [details] [associations]
symbol:CG17565 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 EMBL:AE014297
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004663 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:AY051869 RefSeq:NP_650540.1 UniGene:Dm.4459 HSSP:Q02293
SMR:Q9VEV7 STRING:Q9VEV7 EnsemblMetazoa:FBtr0083286 GeneID:41989
KEGG:dme:Dmel_CG17565 UCSC:CG17565-RA FlyBase:FBgn0038424
InParanoid:Q9VEV7 OrthoDB:EOG4NP5JX GenomeRNAi:41989 NextBio:826605
Uniprot:Q9VEV7
Length = 419
Score = 388 (141.6 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 73/130 (56%), Positives = 89/130 (68%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD---ELLQNVGNYILSCQTYEGGIA 57
++D G+FR+H GE DVR Y AIS A +LN+ + EL G++I CQTYEGG
Sbjct: 171 VRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFG 230
Query: 58 GEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGV-EGGFQGRTNKLVDGCY 116
G PG EAHGGYTFCG+A + L+NEAD+ D AL+ W + RQ EGGFQGRTNKLVDGCY
Sbjct: 231 GAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNKLVDGCY 290
Query: 117 SFWQGGVFAL 126
SFW G +
Sbjct: 291 SFWVGATIPI 300
Score = 199 (75.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 49/94 (52%), Positives = 54/94 (57%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
LF ALQ Y+LLC Q GGL DK KP+D YHTCY LSG+SI QHS + SSP
Sbjct: 316 LFDVEALQEYILLCCQKQSGGLIDKPGKPQDLYHTCYTLSGVSIAQHS---ECASSP--- 369
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSRS 282
VLG N L P HP+FNI A FS S
Sbjct: 370 QVLGDTINELLPTHPLFNIPPKSVAAARSHFSNS 403
Score = 93 (37.8 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 22 YTAISVASILNI-LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN 80
Y + A +L+ DD+ L +V ++ +C++ GG G PG AH T+ + ++ +I
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 81 --EADR-LDLDALIGWVVFRQGVEGGFQ----GRTNKLVDGCY 116
+A R +D L+ ++ + +G F+ G T+ V G Y
Sbjct: 152 SEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETD--VRGAY 192
Score = 58 (25.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 56 IAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIG-WVVFRQGVEGGFQGRTNKLVDG 114
+ GE ++ G Y A ++ + E +L A G W+ Q EGGF G G
Sbjct: 182 VDGE--TDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGLEAHG 239
Query: 115 CYSFWQGGVFALL 127
Y+F ALL
Sbjct: 240 GYTFCGIAGLALL 252
>WB|WBGene00006465 [details] [associations]
symbol:fntb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042
OMA:HPVYNIC HSSP:P49356 PIR:T21291 RefSeq:NP_506580.1
ProteinModelPortal:Q19752 IntAct:Q19752 STRING:Q19752 PaxDb:Q19752
EnsemblMetazoa:F23B12.6.1 EnsemblMetazoa:F23B12.6.2
EnsemblMetazoa:F23B12.6.3 GeneID:179946 KEGG:cel:CELE_F23B12.6
UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6 InParanoid:Q19752
NextBio:907502 Uniprot:Q19752
Length = 401
Score = 383 (139.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 68/127 (53%), Positives = 90/127 (70%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPG 61
K SG F MH+ GEID+R+ Y A++ I+ + DE+ V +I+SCQ++EGG GEP
Sbjct: 173 KHESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPY 232
Query: 62 SEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQ 120
+EAHGGYTFC +A+++L+N D++ L+ W RQ EGGFQGRTNKLVDGCYSFWQ
Sbjct: 233 TEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQ 292
Query: 121 GGVFALL 127
G +F LL
Sbjct: 293 GAIFPLL 299
Score = 163 (62.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQ-HSWLKDEDSSPLP 247
LF + L+ Y+L+ Q GG +DK KP D YHTCY LSGLS+ Q +S +D
Sbjct: 314 LFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGK----- 368
Query: 248 RAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 280
+LG N+L ++PVFN+ + A EFF+
Sbjct: 369 --ILGGDVNMLAEINPVFNVTIASEQFAKEFFT 399
Score = 100 (40.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 23 TAISVASILNILDDELLQNVG-----NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 77
T +V ++++ +E L+++ N++ C+ GG G E +C LA
Sbjct: 141 TYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYCALATCE 200
Query: 78 LIN-EADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
++ D + + + W++ Q EGGF G G Y+F LL RF
Sbjct: 201 IVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRF 253
Score = 93 (37.8 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 17/66 (25%), Positives = 37/66 (56%)
Query: 21 CYTAISVASILNI-LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILI 79
CY ++ IL+ + +++++N+ ++ SC+ EGG G PG AH T+ + ++ +
Sbjct: 92 CYWGVNALKILDAEIPNDVIENIIVFLKSCEHPEGGYGGGPGQLAHLAPTYAAVMCLVSL 151
Query: 80 NEADRL 85
+ + L
Sbjct: 152 QKEEAL 157
>UNIPROTKB|Q19752 [details] [associations]
symbol:fntb-1 "Protein FNTB-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
GeneTree:ENSGT00550000075042 OMA:HPVYNIC HSSP:P49356 PIR:T21291
RefSeq:NP_506580.1 ProteinModelPortal:Q19752 IntAct:Q19752
STRING:Q19752 PaxDb:Q19752 EnsemblMetazoa:F23B12.6.1
EnsemblMetazoa:F23B12.6.2 EnsemblMetazoa:F23B12.6.3 GeneID:179946
KEGG:cel:CELE_F23B12.6 UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6
InParanoid:Q19752 NextBio:907502 Uniprot:Q19752
Length = 401
Score = 383 (139.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 68/127 (53%), Positives = 90/127 (70%)
Query: 2 KDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPG 61
K SG F MH+ GEID+R+ Y A++ I+ + DE+ V +I+SCQ++EGG GEP
Sbjct: 173 KHESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPY 232
Query: 62 SEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQ 120
+EAHGGYTFC +A+++L+N D++ L+ W RQ EGGFQGRTNKLVDGCYSFWQ
Sbjct: 233 TEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQ 292
Query: 121 GGVFALL 127
G +F LL
Sbjct: 293 GAIFPLL 299
Score = 163 (62.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQ-HSWLKDEDSSPLP 247
LF + L+ Y+L+ Q GG +DK KP D YHTCY LSGLS+ Q +S +D
Sbjct: 314 LFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGK----- 368
Query: 248 RAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 280
+LG N+L ++PVFN+ + A EFF+
Sbjct: 369 --ILGGDVNMLAEINPVFNVTIASEQFAKEFFT 399
Score = 100 (40.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 23 TAISVASILNILDDELLQNVG-----NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 77
T +V ++++ +E L+++ N++ C+ GG G E +C LA
Sbjct: 141 TYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYCALATCE 200
Query: 78 LIN-EADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
++ D + + + W++ Q EGGF G G Y+F LL RF
Sbjct: 201 IVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRF 253
Score = 93 (37.8 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 17/66 (25%), Positives = 37/66 (56%)
Query: 21 CYTAISVASILNI-LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILI 79
CY ++ IL+ + +++++N+ ++ SC+ EGG G PG AH T+ + ++ +
Sbjct: 92 CYWGVNALKILDAEIPNDVIENIIVFLKSCEHPEGGYGGGPGQLAHLAPTYAAVMCLVSL 151
Query: 80 NEADRL 85
+ + L
Sbjct: 152 QKEEAL 157
>GENEDB_PFALCIPARUM|PF11_0483 [details] [associations]
symbol:PF11_0483 "farnesyltransferase beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004660 "protein
farnesyltransferase activity" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 345 (126.5 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 61/128 (47%), Positives = 88/128 (68%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K G+FR+H GEID+R Y AIS+ S+ +IL +E+ +NV YIL+CQ YEGG E
Sbjct: 546 LKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEK 605
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFW 119
E HGGY++C LA + ++ + ++++L L W++ +Q +EG F GRTNKLVD CYSFW
Sbjct: 606 FQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVDSCYSFW 665
Query: 120 QGGVFALL 127
G +F L+
Sbjct: 666 MGSIFFLI 673
Score = 181 (68.8 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 37/101 (36%), Positives = 65/101 (64%)
Query: 182 QHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH--SWLK 239
++ ++ LF+ L+ YL LCSQ+ +GG++DK ++ DYYHTCY LSGLS+ Q+ S L
Sbjct: 798 EYIQKNVLFNENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQNHLSSLD 857
Query: 240 DEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 280
++ + + Y+N L +H ++NI +D+ + ++ +FS
Sbjct: 858 KKNFKDIQNKDI--YNN-LNKIHILYNITVDKVYNSYNYFS 895
Score = 57 (25.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 29 SILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLA--AM--ILINEADR 84
+ L+ LD + L + YIL + +G E T+C ++ +M IL NE +
Sbjct: 529 NFLSFLDKKKLHS---YILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKK 585
Query: 85 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++ +++ Q EGGF + G YS+ +L + + I
Sbjct: 586 -NVEK---YILTCQNYEGGFTSEKFQECHGGYSYCALATLCILGKVNKI 630
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 45 YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR-----LDLDALIGWVVFRQG 99
Y+ + +GG G H T+ + I +++ + LD L +++ +
Sbjct: 489 YLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILKLKC 548
Query: 100 VEGGFQGRTNKLVD--GCY 116
+G F+ N +D G Y
Sbjct: 549 TDGSFRVHINGEIDMRGTY 567
>UNIPROTKB|Q8IHP6 [details] [associations]
symbol:PF11_0483 "Farnesyltransferase beta subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004660
"protein farnesyltransferase activity" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 345 (126.5 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 61/128 (47%), Positives = 88/128 (68%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+K G+FR+H GEID+R Y AIS+ S+ +IL +E+ +NV YIL+CQ YEGG E
Sbjct: 546 LKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEK 605
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFW 119
E HGGY++C LA + ++ + ++++L L W++ +Q +EG F GRTNKLVD CYSFW
Sbjct: 606 FQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVDSCYSFW 665
Query: 120 QGGVFALL 127
G +F L+
Sbjct: 666 MGSIFFLI 673
Score = 181 (68.8 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 37/101 (36%), Positives = 65/101 (64%)
Query: 182 QHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH--SWLK 239
++ ++ LF+ L+ YL LCSQ+ +GG++DK ++ DYYHTCY LSGLS+ Q+ S L
Sbjct: 798 EYIQKNVLFNENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQNHLSSLD 857
Query: 240 DEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 280
++ + + Y+N L +H ++NI +D+ + ++ +FS
Sbjct: 858 KKNFKDIQNKDI--YNN-LNKIHILYNITVDKVYNSYNYFS 895
Score = 57 (25.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 29 SILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLA--AM--ILINEADR 84
+ L+ LD + L + YIL + +G E T+C ++ +M IL NE +
Sbjct: 529 NFLSFLDKKKLHS---YILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKK 585
Query: 85 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++ +++ Q EGGF + G YS+ +L + + I
Sbjct: 586 -NVEK---YILTCQNYEGGFTSEKFQECHGGYSYCALATLCILGKVNKI 630
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 45 YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR-----LDLDALIGWVVFRQG 99
Y+ + +GG G H T+ + I +++ + LD L +++ +
Sbjct: 489 YLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILKLKC 548
Query: 100 VEGGFQGRTNKLVD--GCY 116
+G F+ N +D G Y
Sbjct: 549 TDGSFRVHINGEIDMRGTY 567
>DICTYBASE|DDB_G0270948 [details] [associations]
symbol:fntB "protein farnesyltransferase beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;ISS] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
dictyBase:DDB_G0270948 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 KO:K05954
OMA:QDASQPW PANTHER:PTHR11774:SF6 RefSeq:XP_646280.1 HSSP:P49356
ProteinModelPortal:Q55D51 EnsemblProtists:DDB0237553 GeneID:8617235
KEGG:ddi:DDB_G0270948 Uniprot:Q55D51
Length = 500
Score = 386 (140.9 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 68/130 (52%), Positives = 94/130 (72%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
MK GAF D GE D R Y AI+VAS+LNIL EL + V +++LSCQTYEGG P
Sbjct: 182 MKTKEGAFTSEDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYP 241
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
+EAHGGYTFC +AA+ ++N ++D+++L W+ +RQ +GGF+GRTNKLVD CYS+WQ
Sbjct: 242 FNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSYWQ 301
Query: 121 GGVFALLRRF 130
G V+ +++ +
Sbjct: 302 GAVYIIIQSY 311
Score = 110 (43.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 184 REREPLFHSIALQRYLL-LCSQDPR--GGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKD 240
+E LF+ LQ Y++ C Q + G D + +DYYHTCY LSG+S+ Q++ +
Sbjct: 331 QEEGLLFNQAKLQEYVIRFCQQSDKKYSGFSDHPHRGKDYYHTCYGLSGISLSQYNEIGK 390
Query: 241 EDSSPLPRAVLGPYSNVLEPVHPVFN 266
S L ++N E P N
Sbjct: 391 AIQS------LNTFTNTFEQPSPPIN 410
Score = 87 (35.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 28/117 (23%), Positives = 48/117 (41%)
Query: 18 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 77
V A Y I +D E + +++ +T EG E G E T+C +A
Sbjct: 155 VSALYV-IGTEESYKTIDREAMYK---FLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVAS 210
Query: 78 LINEADRLDLD-ALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
++N +L+ ++ +++ Q EGGF G Y+F ++L H I
Sbjct: 211 MLNILTA-ELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNSLHKI 266
Score = 57 (25.1 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 255 SNVLEPVHPVFNIVLDRYHEAHE 277
+ ++EPVHP++NI L + + E
Sbjct: 449 NQLVEPVHPIYNIKLSKCEKGFE 471
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 54 GGIAGEPGSEAHGGYTFCGLAAMILINEADR---LDLDALIGWVVFRQGVEGGF 104
GG G +H TF ++A+ +I + +D +A+ +++ + EG F
Sbjct: 136 GGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAF 189
>SGD|S000002248 [details] [associations]
symbol:RAM1 "Beta subunit of the CAAX farnesyltransferase
(FTase)" species:4932 "Saccharomyces cerevisiae" [GO:0005965
"protein farnesyltransferase complex" evidence=IEA;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 SGD:S000002248
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 EMBL:BK006938
GO:GO:0042127 GO:GO:0018343 EMBL:X95644 eggNOG:COG5029
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:YWIANSL
OrthoDB:EOG4ZPJ4B EMBL:M22753 EMBL:Z74138 EMBL:AY692971 PIR:S67626
RefSeq:NP_010193.1 ProteinModelPortal:P22007 SMR:P22007
DIP:DIP-1556N IntAct:P22007 MINT:MINT-396276 STRING:P22007
PaxDb:P22007 EnsemblFungi:YDL090C GeneID:851468 KEGG:sce:YDL090C
CYGD:YDL090c BindingDB:P22007 ChEMBL:CHEMBL4122 NextBio:968756
Genevestigator:P22007 GermOnline:YDL090C Uniprot:P22007
Length = 431
Score = 338 (124.0 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 64/133 (48%), Positives = 90/133 (67%)
Query: 1 MKDPSGAFRMH-DAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGE 59
+K+P+G F+ + GE+D R Y A+S+A++LNIL +EL + V NY+ +CQ YEGG
Sbjct: 192 LKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEGGFGSC 251
Query: 60 PG-SEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYS 117
P EAHGGYTFC A++ ++ D+++++ L+ W RQ E GF GR+NKLVDGCYS
Sbjct: 252 PHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKLVDGCYS 311
Query: 118 FWQGGVFALLRRF 130
FW GG A+L F
Sbjct: 312 FWVGGSAAILEAF 324
Score = 131 (51.2 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 32/96 (33%), Positives = 53/96 (55%)
Query: 190 FHSIALQRYLLLCSQDP-RGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP--- 245
F+ AL+ Y+L C Q+ + GLRDK D+YHT YCL GL++ + S+ + SP
Sbjct: 330 FNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTNYCLLGLAVAESSYSCTPNDSPHNI 389
Query: 246 --LPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
P ++G S+ L V+PV+ + ++ + +F
Sbjct: 390 KCTPDRLIG--SSKLTDVNPVYGLPIENVRKIIHYF 423
Score = 69 (29.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 34 LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD----RLDLDA 89
L D+ + + + + + G G PG +H T+ + A+ L + D R+D
Sbjct: 125 LSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLCDNIDGCWDRIDRKG 184
Query: 90 LIGWVVFRQGVEGGFQ 105
+ W++ + GGF+
Sbjct: 185 IYQWLISLKEPNGGFK 200
>UNIPROTKB|B3KSC2 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ35979 fis, clone TESTI2013545,
highly similar to Protein farnesyltransferase subunit beta (EC
2.5.1.58)" species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008144
GO:GO:0008270 GO:GO:0034097 GO:GO:0014070 GO:GO:0042277
GO:GO:0010035 GO:GO:0042060 GO:GO:0018343 GO:GO:0048146
GO:GO:0045787 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660
GO:GO:0019840 PANTHER:PTHR11774:SF6 UniGene:Hs.325531 EMBL:AL139022
EMBL:AL135745 EMBL:AK093298 IPI:IPI01011588 SMR:B3KSC2
STRING:B3KSC2 Ensembl:ENST00000448390 UCSC:uc001xid.3
HGNC:HGNC:42960 HOVERGEN:HBG102605 Uniprot:B3KSC2
Length = 193
Score = 233 (87.1 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 43/68 (63%), Positives = 51/68 (75%)
Query: 63 EAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQG 121
EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ
Sbjct: 2 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 61
Query: 122 GVFALLRR 129
G+ LL R
Sbjct: 62 GLLPLLHR 69
Score = 229 (85.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 248
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 85 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 140
Query: 249 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 279
VLG N L+P HPV+NI D+ +A +F
Sbjct: 141 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 171
Score = 49 (22.3 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 22 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 77
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 7 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 65
Query: 78 LINEADRLDLDALIG---WVVFRQGVE 101
L++ A D + W+ +Q ++
Sbjct: 66 LLHRALHAQGDPALSMSHWMFHQQALQ 92
>POMBASE|SPAC17G6.04c [details] [associations]
symbol:cpp1 "protein farnesyltransferase beta subunit
Cpp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0010958 "regulation of amino acid import" evidence=IGI]
[GO:0018343 "protein farnesylation" evidence=IMP;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 PomBase:SPAC17G6.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
GO:GO:0008270 GO:GO:0042127 GO:GO:0018343 GO:GO:0006995
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 OMA:HPVYNIC PIR:T37836
RefSeq:NP_594251.1 ProteinModelPortal:O13782 STRING:O13782
EnsemblFungi:SPAC17G6.04c.1 GeneID:2542380 KEGG:spo:SPAC17G6.04c
OrthoDB:EOG4ZPJ4B NextBio:20803439 GO:GO:0010958 Uniprot:O13782
Length = 382
Score = 321 (118.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNI-LDDELLQNVGNYILSCQTYEGGIAGE 59
+K+P G+FR+++ GE D R+ Y A+ V+S++ I +DD L + ++ CQTYEGG++G
Sbjct: 139 LKNPDGSFRVNNEGESDARSVYAAVCVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGV 198
Query: 60 PGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVE-GGFQGRTNKLVDGCYSF 118
P +EAHGGYTFC LAA+ L+ D L+ L W+V RQ GF GR+NKLVDGCYS+
Sbjct: 199 PYAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSW 258
Query: 119 WQG 121
W G
Sbjct: 259 WVG 261
Score = 136 (52.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 32/85 (37%), Positives = 43/85 (50%)
Query: 183 HREREPLFHSIA-LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSW-LKD 240
H+ LF++ L Y+L C Q GGLRDK K D YHTCYCL GLS + +
Sbjct: 276 HKSLPNLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSSIAYDYRYHT 335
Query: 241 EDSSPLPRAVLGPYSNVLEPVHPVF 265
D ++L + L P HP++
Sbjct: 336 SDGWSYKPSILHSSLSSLLPAHPIY 360
Score = 74 (31.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 26/109 (23%), Positives = 45/109 (41%)
Query: 1 MKDP-SGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGE 59
M DP F + DA + Y +S +IL LD + + + + + GG G
Sbjct: 41 MLDPLPSPFTVLDASRAWM--VYWELSSLAILGKLDSSVCERAISSVRQLKGPSGGFCGG 98
Query: 60 PGSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGVEGGFQ 105
G + H T+ + ++ L + D L D L W+ + +G F+
Sbjct: 99 NGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFR 147
Score = 71 (30.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELLQN--VGNYILSCQTYEGG-- 55
+K PSG F + + + + Y +I + + D L++ + +++ S + +G
Sbjct: 88 LKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFR 147
Query: 56 IAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGC 115
+ E S+A Y +++++ I+ D L + + W+ Q EGG G G
Sbjct: 148 VNNEGESDARSVYAAVCVSSLVGISMDDPL-FEGTLQWLCKCQTYEGGLSGVPYAEAHGG 206
Query: 116 YSFWQGGVFALL 127
Y+F ALL
Sbjct: 207 YTFCALAAIALL 218
>CGD|CAL0001670 [details] [associations]
symbol:RAM1 species:5476 "Candida albicans" [GO:0018342
"protein prenylation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0010958
"regulation of amino acid import" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 CGD:CAL0001670
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0018342
PANTHER:PTHR11774:SF6 EMBL:AACQ01000259 RefSeq:XP_710548.1
ProteinModelPortal:Q59LD0 STRING:Q59LD0 GeneID:3647859
KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 185 (70.2 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 5 SGA-FRMHDAGEIDVRACYTAISVASILNILD-----------DELLQNVGNYILSCQTY 52
SGA F MH+ GE+D R+ Y A+ + ++LN+ + D L+ V N++ SCQTY
Sbjct: 294 SGASFIMHENGEMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNSCQTY 353
Query: 53 EGGIAGEPGSEAHGGYTFCGLAAMILINE 81
EGG + P +EAHGGYT+C LA+ L+ E
Sbjct: 354 EGGFSNIPNTEAHGGYTYCALASYFLLYE 382
Score = 152 (58.6 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 182 QHRERE-PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWL-- 238
Q +++E +F L++YLL+ +QD GG +DK K DYYHT Y LSGLSI +HS+
Sbjct: 456 QGQQQEVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFS 515
Query: 239 KDEDSSPLPRAV--------LGPY---SNVLEPVHPVFNIVLDRYHEAHEFF 279
+D++ L + G N P+HPVF I + + H++F
Sbjct: 516 QDDEGRSLAFQIDVEREEEERGGGRGGDNFTNPIHPVFGIPIKFVKKCHDYF 567
Score = 138 (53.6 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 85 LDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALLR 128
+D + L+ W V RQ ++GG GRTNKLVD CY FW GG+F+LL+
Sbjct: 402 IDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQ 446
Score = 55 (24.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 23/82 (28%), Positives = 33/82 (40%)
Query: 48 SCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN---------EADRLD--LDALIGWVVF 96
SC + I E G E T+C L + L+N + LD +D + W+
Sbjct: 291 SCGSGASFIMHENG-EMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNS 349
Query: 97 RQGVEGGFQGRTNKLVDGCYSF 118
Q EGGF N G Y++
Sbjct: 350 CQTYEGGFSNIPNTEAHGGYTY 371
Score = 50 (22.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 29 SILNILDDELLQNVGNY--ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 86
SIL+++ +++ + + NY LS ++G I G H T+ + +IL ++ + LD
Sbjct: 216 SILDLIVNKITKCI-NYGDSLSGVPFDG-IGGGNNQLGHLASTYAAILTLILTDQYELLD 273
Query: 87 -LDALI-GWVV 95
L LI W++
Sbjct: 274 NLRELIRDWLL 284
Score = 37 (18.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 94 VVFRQGVEGGFQGRTNKLVD 113
++ Q GGF+ + K VD
Sbjct: 475 LIIAQDESGGFKDKPGKQVD 494
>UNIPROTKB|Q59LD0 [details] [associations]
symbol:RAM1 "Putative uncharacterized protein RAM1"
species:237561 "Candida albicans SC5314" [GO:0018342 "protein
prenylation" evidence=NAS] InterPro:IPR001330 InterPro:IPR026872
Pfam:PF00432 CGD:CAL0001670 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343 eggNOG:COG5029
GO:GO:0005965 GO:GO:0018342 PANTHER:PTHR11774:SF6 EMBL:AACQ01000259
RefSeq:XP_710548.1 ProteinModelPortal:Q59LD0 STRING:Q59LD0
GeneID:3647859 KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 185 (70.2 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 5 SGA-FRMHDAGEIDVRACYTAISVASILNILD-----------DELLQNVGNYILSCQTY 52
SGA F MH+ GE+D R+ Y A+ + ++LN+ + D L+ V N++ SCQTY
Sbjct: 294 SGASFIMHENGEMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNSCQTY 353
Query: 53 EGGIAGEPGSEAHGGYTFCGLAAMILINE 81
EGG + P +EAHGGYT+C LA+ L+ E
Sbjct: 354 EGGFSNIPNTEAHGGYTYCALASYFLLYE 382
Score = 152 (58.6 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 182 QHRERE-PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWL-- 238
Q +++E +F L++YLL+ +QD GG +DK K DYYHT Y LSGLSI +HS+
Sbjct: 456 QGQQQEVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFS 515
Query: 239 KDEDSSPLPRAV--------LGPY---SNVLEPVHPVFNIVLDRYHEAHEFF 279
+D++ L + G N P+HPVF I + + H++F
Sbjct: 516 QDDEGRSLAFQIDVEREEEERGGGRGGDNFTNPIHPVFGIPIKFVKKCHDYF 567
Score = 138 (53.6 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 85 LDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALLR 128
+D + L+ W V RQ ++GG GRTNKLVD CY FW GG+F+LL+
Sbjct: 402 IDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQ 446
Score = 55 (24.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 23/82 (28%), Positives = 33/82 (40%)
Query: 48 SCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN---------EADRLD--LDALIGWVVF 96
SC + I E G E T+C L + L+N + LD +D + W+
Sbjct: 291 SCGSGASFIMHENG-EMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNS 349
Query: 97 RQGVEGGFQGRTNKLVDGCYSF 118
Q EGGF N G Y++
Sbjct: 350 CQTYEGGFSNIPNTEAHGGYTY 371
Score = 50 (22.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 29 SILNILDDELLQNVGNY--ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 86
SIL+++ +++ + + NY LS ++G I G H T+ + +IL ++ + LD
Sbjct: 216 SILDLIVNKITKCI-NYGDSLSGVPFDG-IGGGNNQLGHLASTYAAILTLILTDQYELLD 273
Query: 87 -LDALI-GWVV 95
L LI W++
Sbjct: 274 NLRELIRDWLL 284
Score = 37 (18.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 94 VVFRQGVEGGFQGRTNKLVD 113
++ Q GGF+ + K VD
Sbjct: 475 LIIAQDESGGFKDKPGKQVD 494
>ASPGD|ASPL0000050108 [details] [associations]
symbol:AN2002 species:162425 "Emericella nidulans"
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0010958 "regulation of amino acid
import" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 EMBL:BN001307
GO:GO:0042127 GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 ProteinModelPortal:C8VLC9
EnsemblFungi:CADANIAT00008669 OMA:CEGGEED Uniprot:C8VLC9
Length = 519
Score = 285 (105.4 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
Identities = 61/147 (41%), Positives = 83/147 (56%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNI---LDDE----------LLQNVGNYIL 47
+K P G + + GE DVR Y A+ + S+LN+ L E + Y+
Sbjct: 232 LKQPDGGITVCEGGEEDVRGAYCAMVIISLLNLPLTLPPEAKAREYGLETFTDGLWEYLS 291
Query: 48 SCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR-----LDLDALIGWVVFRQ-GVE 101
CQT+EGGI+G PGSEAHG Y FC LA + ++ E + +D+ L+ W+ RQ E
Sbjct: 292 RCQTFEGGISGSPGSEAHGAYAFCALACLCILGEPEATIPKCMDVQMLLSWLSARQYAPE 351
Query: 102 GGFQGRTNKLVDGCYSFWQGGVFALLR 128
GGF GRTNKLVDGCYS W G + L++
Sbjct: 352 GGFAGRTNKLVDGCYSHWVGSCWPLIQ 378
Score = 128 (50.1 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 189 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLP 247
L+ L RY+L C Q GGLRDK K D YHTCY L+GLS QH + +SS +P
Sbjct: 397 LYSREGLTRYILGCCQSKNGGLRDKPGKHPDSYHTCYTLTGLSSVQH-YHYHTNSSVVP 454
Score = 44 (20.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 46 ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EADRL-DLDALIGWVVFRQGVEG 102
I Q GG G G +H ++ + ++ ++ EA L D A+ W+ + +G
Sbjct: 178 ITPMQNPTGGFGGGHGQISHCASSYAAVLSLAMVGGEEAFNLIDRQAMWKWLGKLKQPDG 237
Query: 103 G 103
G
Sbjct: 238 G 238
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 41 NVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGV 100
++G S + Y G S + LAA+ L+ E + I + Q
Sbjct: 127 HIGYLCDSLEDYPPGFVAMDASRPW--MIYWALAALSLLGEDLSRHRERAIATITPMQNP 184
Query: 101 EGGFQG 106
GGF G
Sbjct: 185 TGGFGG 190
>CGD|CAL0000126 [details] [associations]
symbol:BET2 species:5476 "Candida albicans" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
CGD:CAL0000126 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AACQ01000032
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
PANTHER:PTHR11774:SF5 RefSeq:XP_719325.1 ProteinModelPortal:Q5ACS9
STRING:Q5ACS9 GeneID:3639025 KEGG:cal:CaO19.7563 Uniprot:Q5ACS9
Length = 341
Score = 243 (90.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 50/131 (38%), Positives = 74/131 (56%)
Query: 4 PSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSE 63
P G+F+ GE+D R YTA+S S+LN L D + +I+ C ++GG PGSE
Sbjct: 135 PDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSE 194
Query: 64 AHGGYTFCGLAAMILINEADRLDLD----ALIGWVVFRQGV-EGGFQGRTNKLVDGCYSF 118
+H F + A+ ++N+ D LD++ LI W+ RQ + GGF GR KL D CYS+
Sbjct: 195 SHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFNGRPEKLPDVCYSW 254
Query: 119 WQGGVFALLRR 129
W ++L+R
Sbjct: 255 WVLSSLSILKR 265
Score = 87 (35.7 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH 235
L+ ++L C GG D+ D YHTC+ ++GLS+ +
Sbjct: 274 LENFILTCQDLENGGFSDRPGNQTDVYHTCFAIAGLSLIDY 314
>DICTYBASE|DDB_G0290671 [details] [associations]
symbol:rabggtb "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018344
"protein geranylgeranylation" evidence=IEA;ISS] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
dictyBase:DDB_G0290671 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GenomeReviews:CM000154_GR EMBL:AAFI02000164
eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_001733035.1
ProteinModelPortal:B0G172 SMR:B0G172 STRING:B0G172
EnsemblProtists:DDB0233949 GeneID:8627741 KEGG:ddi:DDB_G0290671
Uniprot:B0G172
Length = 339
Score = 239 (89.2 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 49/128 (38%), Positives = 69/128 (53%)
Query: 6 GAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAH 65
G+F GE+D R Y AI S+L LD + YILSCQ ++GG PG+E+H
Sbjct: 135 GSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESH 194
Query: 66 GGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFA 125
G F + A+ ++NE +++D+D L W+ RQ GG GR K D CYS+W +
Sbjct: 195 AGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALS 254
Query: 126 LLRRFHSI 133
+ R H I
Sbjct: 255 AIDRLHWI 262
Score = 105 (42.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 16 IDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAA 75
I + Y +S +L LD V ++LSCQ GG G + H T +
Sbjct: 49 IRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQI 108
Query: 76 MILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+I + D++D+++++ +VV Q +G F G VD +S+ +LL+ I
Sbjct: 109 LIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKI 166
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/100 (17%), Positives = 49/100 (49%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
+G F + + + + + +A+ + + LD + +V +Y++ Q +G G+ E
Sbjct: 86 NGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEV 145
Query: 65 HGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
+++ + + L+ D+++ + + +++ Q +GGF
Sbjct: 146 DTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGF 185
Score = 81 (33.6 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLG 252
L+ Y+L C + GG+ DK D +HT + + GLS+ + KD+ S P LG
Sbjct: 267 LKSYILKCQDNETGGIADKPGDIPDVFHTFFGICGLSLM--GYFKDQIESIDPVYALG 322
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 204 QDPRGGLRDKLRKPRDYYHTCYCLSGLS-ICQHSWLKDED 242
Q P GGL + K D ++ + LS LS I + W+ D D
Sbjct: 227 QLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWI-DND 265
>ASPGD|ASPL0000011885 [details] [associations]
symbol:AN3747 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0006612 EMBL:BN001302 GO:GO:0006888 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 EnsemblFungi:CADANIAT00004976 Uniprot:C8V7A2
Length = 334
Score = 231 (86.4 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 46/131 (35%), Positives = 71/131 (54%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
+G+F + GE+D R Y A++ S+L +LD + +Y+ C+ +GG PG+E+
Sbjct: 138 TGSFMGDEWGELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAES 197
Query: 65 HGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVF 124
H G F + A+ + D +D D L GW+ RQ GG GR KL D CYS+W G
Sbjct: 198 HAGQVFTCVGALAIAGRLDLVDKDRLGGWLSERQLDHGGLNGRPEKLADACYSWWVGASL 257
Query: 125 ALLRRFHSIIG 135
A++ + + I G
Sbjct: 258 AMIGKLNWIDG 268
Score = 92 (37.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++ +L D N +++LSCQ GG PG +AH YT + ++ ++
Sbjct: 52 YWGLTALHLLGCPDGLPRDNAVDFVLSCQQENGGFGAAPGHDAHLLYTVSAVQILVTLDA 111
Query: 82 ADRLDLDALIG 92
D L+ L G
Sbjct: 112 VDELEKRGLGG 122
Score = 77 (32.2 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 195 LQRYLLLCSQDPR-GGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDED 242
L Y+L C QDP GG D+ D +HT + ++GLS+ + +++ D
Sbjct: 271 LAAYILRC-QDPEAGGFADRPGNAVDVFHTHFAIAGLSLLGYEGVEEVD 318
>TAIR|locus:2039752 [details] [associations]
symbol:PGGT-I species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IMP;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018344 "protein geranylgeranylation" evidence=IMP;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 GO:GO:0009737
EMBL:CP002685 GO:GO:0009733 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0009414 EMBL:AC004218 GO:GO:0009788 eggNOG:COG5029
GO:GO:0004662 GO:GO:0018344 KO:K11713 HSSP:P53610 OMA:PDLYHSY
EMBL:BT002465 EMBL:BT008464 IPI:IPI00537488 PIR:T00565
RefSeq:NP_181487.1 UniGene:At.16938 ProteinModelPortal:O80642
SMR:O80642 STRING:O80642 PaxDb:O80642 PRIDE:O80642
EnsemblPlants:AT2G39550.1 GeneID:818540 KEGG:ath:AT2G39550
TAIR:At2g39550 InParanoid:O80642 PhylomeDB:O80642
ProtClustDB:CLSN2683354 BioCyc:MetaCyc:AT2G39550-MONOMER
ArrayExpress:O80642 Genevestigator:O80642 Uniprot:O80642
Length = 375
Score = 251 (93.4 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 53/139 (38%), Positives = 81/139 (58%)
Query: 1 MKDPSGAFR-MHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGE 59
++ G+F +H GE D+R Y A ++ +L+ ++ NYIL+CQ+Y+GG
Sbjct: 167 LQQDDGSFMPIHIGGETDLRFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLI 226
Query: 60 PGSEAHGGYTFCGLAAM---------ILINEADR--LDLDALIGWVVFRQGVEGGFQGRT 108
PGSE+HGG T+C +A++ +L N++ +D L+ W + RQ +GGFQGRT
Sbjct: 227 PGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRT 286
Query: 109 NKLVDGCYSFWQGGVFALL 127
NK D CY+FW G V L+
Sbjct: 287 NKPSDTCYAFWIGAVLKLI 305
Score = 56 (24.8 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 187 EPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPL 246
+ L +AL+++L+ C Q GG + D YH+ Y + S+ L+++ SPL
Sbjct: 308 DALIDKMALRKFLMSC-QSKYGGFSKFPGQLPDLYHSYYGYTAFSL-----LEEQGLSPL 361
>TAIR|locus:2177058 [details] [associations]
symbol:RGTB1 "RAB geranylgeranyl transferase beta subunit
1" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 HSSP:Q08603
EMBL:BT004816 EMBL:BT004818 EMBL:AK227802 IPI:IPI00534125
RefSeq:NP_568259.1 UniGene:At.46789 ProteinModelPortal:Q84J75
STRING:Q84J75 PaxDb:Q84J75 PRIDE:Q84J75 EnsemblPlants:AT5G12210.1
GeneID:831094 KEGG:ath:AT5G12210 TAIR:At5g12210 InParanoid:Q84J75
OMA:ADSICEY PhylomeDB:Q84J75 ProtClustDB:PLN03201
Genevestigator:Q84J75 Uniprot:Q84J75
Length = 321
Score = 230 (86.0 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 49/133 (36%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+++ G+F GEID R Y AI SIL LD ++ YI+SC+ +GG P
Sbjct: 120 LQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTP 179
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
G+E+H G FC + A+ + +D D+L W+ RQ GG GR KL D CYS+W
Sbjct: 180 GAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWV 239
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 240 LSSLIMIDRVHWI 252
Score = 101 (40.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 18 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 77
+ Y ++ +L+ L + V +++++CQ GG AG G + H YT + +
Sbjct: 41 MNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILA 100
Query: 78 LINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
L ++ + LD+ + +V Q +G F G +D +S+
Sbjct: 101 LFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSY 141
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/103 (18%), Positives = 52/103 (50%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASI---LNILDDELLQNVGNYILSCQTYEGGIAGEPG 61
SG F + + + +A+ + ++ +NILD + V +Y+ Q +G +G+
Sbjct: 76 SGGFAGNTGHDPHILYTLSAVQILALFDKINILD---IGKVSSYVAKLQNEDGSFSGDMW 132
Query: 62 SEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
E +++ + + ++ D+++++ + ++V + ++GGF
Sbjct: 133 GEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGF 175
Score = 70 (29.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSS-PLP 247
L +++L C GG+ D+ D +HT + ++GLS+ ++ +K D + LP
Sbjct: 257 LVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYALP 310
>TAIR|locus:2088614 [details] [associations]
symbol:RGTB2 "RAB geranylgeranyl transferase beta subunit
2" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002686 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AP002040
EMBL:AC069473 EMBL:AP002063 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 OMA:ERQDYES HSSP:Q08603 ProtClustDB:PLN03201
EMBL:BT028896 IPI:IPI00545274 RefSeq:NP_187814.1 RefSeq:NP_850567.1
UniGene:At.39649 ProteinModelPortal:Q9LHL5 SMR:Q9LHL5
EnsemblPlants:AT3G12070.1 EnsemblPlants:AT3G12070.2 GeneID:820381
KEGG:ath:AT3G12070 TAIR:At3g12070 InParanoid:Q9LHL5
PhylomeDB:Q9LHL5 Genevestigator:Q9LHL5 Uniprot:Q9LHL5
Length = 317
Score = 232 (86.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 50/134 (37%), Positives = 71/134 (52%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
+++ G+F GE+D R Y AI SIL LD ++ +YI+SC+ +GG P
Sbjct: 115 LQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSP 174
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVE-GGFQGRTNKLVDGCYSFW 119
G+E+H G FC + A+ + R+D D L W+ RQ E GG GR KL D CYS+W
Sbjct: 175 GAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWW 234
Query: 120 QGGVFALLRRFHSI 133
++ R H I
Sbjct: 235 VLSSLIMIDRVHWI 248
Score = 108 (43.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 18 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 77
+ Y ++ ++L+ L V +++++CQ GG AG G + H YT + +
Sbjct: 36 MNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILA 95
Query: 78 LINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 118
L ++ + LD++ + ++ Q +G F G VD +S+
Sbjct: 96 LFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSY 136
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 23/103 (22%), Positives = 52/103 (50%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASI---LNILDDELLQNVGNYILSCQTYEGGIAGEPG 61
SG F + + V +A+ + ++ LNILD ++ V NYI Q +G +G+
Sbjct: 71 SGGFAGNTGHDPHVLYTLSAVQILALFDKLNILD---VEKVSNYIAGLQNEDGSFSGDIW 127
Query: 62 SEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
E +++ + + ++ D++++ + ++V + ++GGF
Sbjct: 128 GEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGF 170
Score = 66 (28.3 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 200 LLCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSS-PLPRAVL 251
+L SQD GG+ D+ D +HT + ++GLS+ ++ +K D + LP V+
Sbjct: 257 ILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAYALPVHVI 310
>SGD|S000006380 [details] [associations]
symbol:BET2 "Beta subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0018344 "protein geranylgeranylation" evidence=IEA;IDA]
[GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA;IDA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IDA;IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 SGD:S000006380
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
EMBL:BK006949 GO:GO:0006888 EMBL:U25842 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 GO:GO:0005968
OrthoDB:EOG43V34B EMBL:M29585 EMBL:M26597 EMBL:AY558067 PIR:S59834
RefSeq:NP_015502.1 ProteinModelPortal:P20133 SMR:P20133
DIP:DIP-2214N IntAct:P20133 MINT:MINT-642059 STRING:P20133
PaxDb:P20133 EnsemblFungi:YPR176C GeneID:856306 KEGG:sce:YPR176C
CYGD:YPR176c OMA:ERQDYES NextBio:981673 Genevestigator:P20133
GermOnline:YPR176C Uniprot:P20133
Length = 325
Score = 220 (82.5 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 52/137 (37%), Positives = 73/137 (53%)
Query: 6 GAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAH 65
G+F+ GE+D R YTA+S SIL L E++ +++L C ++GG P +E+H
Sbjct: 124 GSFQGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESH 183
Query: 66 GGYTFCGLAAMILINEADRLDLDAL--IGW-VVFRQGVEGGFQGRTNKLVDGCYSFWQGG 122
F L A+ + N+ D L D L IGW + RQ EGG GR +KL D CYS+W
Sbjct: 184 AAQAFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLS 243
Query: 123 VFALLRRFHSIIGESPT 139
A++ R I E T
Sbjct: 244 SLAIIGRLDWINYEKLT 260
Score = 75 (31.5 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP-LPRAVLGP 253
L ++L C + +GG+ D+ D +HT + ++GLS+ + L D +P++V
Sbjct: 259 LTEFILKCQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLVPIDPIYCMPKSVTSK 318
Query: 254 Y 254
+
Sbjct: 319 F 319
>FB|FBgn0028970 [details] [associations]
symbol:betaggt-II "beta subunit of type II geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=NAS]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 EMBL:AE014134
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0004662
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 EMBL:AF133269 EMBL:AY060784
RefSeq:NP_524894.1 UniGene:Dm.1765 HSSP:Q08603 SMR:Q9XZ68
IntAct:Q9XZ68 MINT:MINT-777402 STRING:Q9XZ68
EnsemblMetazoa:FBtr0077631 GeneID:47757 KEGG:dme:Dmel_CG18627
UCSC:CG18627-RA CTD:47757 FlyBase:FBgn0028970 InParanoid:Q9XZ68
OrthoDB:EOG41VHJN GenomeRNAi:47757 NextBio:839096 Uniprot:Q9XZ68
Length = 347
Score = 208 (78.3 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 45/139 (32%), Positives = 73/139 (52%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDEL-LQNVGNYILSC--QTYEGGIA 57
++ P G+F GE+D R + A++ ++L ++ + ++ ++LSC QT +GG
Sbjct: 138 LQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFG 196
Query: 58 GEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYS 117
+PG+E+H G +C + L + LD+D L W+ RQ GG GR KL D CYS
Sbjct: 197 SKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDVCYS 256
Query: 118 FWQGGVFALLRRFHSIIGE 136
+W ++ R H I E
Sbjct: 257 WWVLASLTIMGRLHWISSE 275
Score = 89 (36.4 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
LQ+++L C GG D+ D +HT + + GLS+ HS LK
Sbjct: 277 LQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLK 321
Score = 82 (33.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 28/114 (24%), Positives = 48/114 (42%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYE-GGIAGEPGSEAHGGYTFCGLAAMILIN 80
Y + I+ L+ +++ ++ CQ GG A G + H YT + + +
Sbjct: 62 YWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTYD 121
Query: 81 EADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSII 134
+ +D +A++ +VV Q +G F G VD +SF LL R I
Sbjct: 122 ALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTI 175
>UNIPROTKB|G4MQQ5 [details] [associations]
symbol:MGG_09304 "Type-2 protein geranylgeranyltransferase
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0006612 GO:GO:0006888
EMBL:CM001231 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_003709954.1
ProteinModelPortal:G4MQQ5 EnsemblFungi:MGG_09304T0 GeneID:2680219
KEGG:mgr:MGG_09304 Uniprot:G4MQQ5
Length = 329
Score = 199 (75.1 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
+G F + GE D R Y A++ S+L +L+ + ++I++C ++GG PG+E+
Sbjct: 132 TGTFAGDEWGEEDTRFLYGALNALSLLGLLEMVDVGKAVDHIVACANFDGGYGNRPGAES 191
Query: 65 HGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVF 124
H G F +AA+ + D +D D L W+ RQ GG GR K D CYS+W
Sbjct: 192 HSGQIFTCVAALSIAGRLDLVDTDKLGRWLSERQIAGGGLNGRPEKQEDVCYSWWVLSSL 251
Query: 125 ALLRRFHSI 133
+ R H I
Sbjct: 252 ETIGRTHWI 260
Score = 93 (37.8 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP-LPRAVL 251
L ++L C +GG+ D+ D +HTC+ L+GLS+ + L+D D +P+A +
Sbjct: 265 LAAFILKCQDTEKGGMSDRPGNQVDVFHTCFGLTGLSLLKWPGLEDVDPVYCMPKATI 322
Score = 74 (31.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 45 YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 86
++LSCQ GG PG +AH T + + +++ D LD
Sbjct: 70 FVLSCQHDNGGFGAAPGHDAHMLSTVSAVQILAMVDALDELD 111
Score = 57 (25.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 70 FCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
+ GL A+ L+ + D L DA I +V+ Q GGF
Sbjct: 47 YWGLVALHLLGQPDALPRDATIEFVLSCQHDNGGF 81
>POMBASE|SPAC167.02 [details] [associations]
symbol:ptb1 "geranylgeranyltransferase II beta subunit
Ptb1" species:4896 "Schizosaccharomyces pombe" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
PomBase:SPAC167.02 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0070317 GenomeReviews:CU329670_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612 GO:GO:0006888
GO:GO:0006995 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
GO:GO:0005968 EMBL:X92183 PIR:S65091 RefSeq:NP_593383.1
ProteinModelPortal:P46960 STRING:P46960 EnsemblFungi:SPAC167.02.1
GeneID:2543284 KEGG:spo:SPAC167.02 OrthoDB:EOG43V34B
NextBio:20804303 Uniprot:P46960
Length = 311
Score = 203 (76.5 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 43/128 (33%), Positives = 71/128 (55%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVG-NYILSCQTYEGGIAGE 59
+++ G+ + GEID R Y+ I+ +IL LD L +N ++++ C ++GG
Sbjct: 112 LQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLD-YLNKNTAVDWLMKCYNFDGGFGLC 170
Query: 60 PGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFW 119
PG+E+HG F +AA+ ++N+ D +D + L W+ RQ GG GR KL D CY +W
Sbjct: 171 PGAESHGAMVFTCVAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWW 230
Query: 120 QGGVFALL 127
A++
Sbjct: 231 DLSPLAII 238
Score = 96 (38.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 5 SGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
SG F + + + A+ V ++L+ L V +YI+ Q +G + G+ E
Sbjct: 68 SGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGDRWGEI 127
Query: 65 HGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
+ + G+ + ++ + D L+ + + W++ +GGF
Sbjct: 128 DARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGF 167
Score = 85 (35.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 16 IDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAA 75
+ V A Y + +L D + + +++LSC T GG A PG + H T +
Sbjct: 31 LHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQV 90
Query: 76 MILINEADRLDLDALIGWVVFRQGVEGGFQG 106
+ +++ +D D + +++ Q +G +G
Sbjct: 91 LAMLDSLHVVDKDKVASYIIGLQNEDGSMKG 121
Score = 81 (33.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 200 LLCSQDP-RGGLRDKLRKPRDYYHTCYCLSGLSICQ 234
LL +QD GG D+ D YHTC+ L+GLS+ Q
Sbjct: 253 LLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQ 288
>UNIPROTKB|P53611 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=NAS] [GO:0007601 "visual perception" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0007601 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 CTD:5876 HOVERGEN:HBG008182
OrthoDB:EOG4V6ZGV EMBL:U49245 EMBL:X98001 EMBL:Y08201 EMBL:BC020790
IPI:IPI00295849 PIR:G02431 RefSeq:NP_004573.2 UniGene:Hs.78948
ProteinModelPortal:P53611 SMR:P53611 IntAct:P53611 MINT:MINT-260716
STRING:P53611 PhosphoSite:P53611 DMDM:2506788 PaxDb:P53611
PRIDE:P53611 Ensembl:ENST00000319942 GeneID:5876 KEGG:hsa:5876
UCSC:uc001dgy.1 GeneCards:GC01P076251 HGNC:HGNC:9796 HPA:HPA026585
HPA:HPA027167 MIM:179080 neXtProt:NX_P53611 PharmGKB:PA34157
InParanoid:P53611 PhylomeDB:P53611 BRENDA:2.5.1.60 BindingDB:P53611
ChEMBL:CHEMBL2338 ChiTaRS:RABGGTB GenomeRNAi:5876 NextBio:22832
ArrayExpress:P53611 Bgee:P53611 CleanEx:HS_RABGGTB
Genevestigator:P53611 Uniprot:P53611
Length = 331
Score = 208 (78.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 100 (40.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 25/123 (20%), Positives = 54/123 (43%)
Query: 11 HDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 70
HD + + +++ +N++D + V Y+ Q +G AG+ E ++F
Sbjct: 91 HDPHLLYTLSAVQILTLYDSINVID---VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSF 147
Query: 71 CGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
C +A + L+ + D ++++ I +V+ +GGF R + G A+ +
Sbjct: 148 CAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL 207
Query: 131 HSI 133
H +
Sbjct: 208 HQV 210
Score = 97 (39.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 69 (29.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
>WB|WBGene00015099 [details] [associations]
symbol:ggtb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
GO:GO:0009792 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008219 GO:GO:0000003 eggNOG:COG5029 EMBL:FO080148
GO:GO:0018344 GO:GO:0004663 RefSeq:NP_498559.1 RefSeq:NP_741214.2
UniGene:Cel.10970 ProteinModelPortal:P41992 SMR:P41992
STRING:P41992 PaxDb:P41992 PRIDE:P41992 EnsemblMetazoa:B0280.1a
GeneID:175998 KEGG:cel:CELE_B0280.1 UCSC:B0280.1a CTD:175998
WormBase:B0280.1a WormBase:B0280.1b GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 InParanoid:P41992 KO:K05956 OMA:ESHAGLI
NextBio:890666 PANTHER:PTHR11774:SF5 Uniprot:P41992
Length = 335
Score = 209 (78.6 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 41/133 (30%), Positives = 66/133 (49%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F +GE+D R +++ +L L + + +++ C +GG P
Sbjct: 132 LQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRP 191
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + A+ + D +D D W+ FRQ GG GR KL D CYS+W
Sbjct: 192 GSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWV 251
Query: 121 GGVFALLRRFHSI 133
A+L R + I
Sbjct: 252 LASLAILGRLNFI 264
Score = 126 (49.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 13 AGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCG 72
A + V Y ++ + L+ + + NY+L C+ +GG PG ++H +T C
Sbjct: 48 AEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCA 107
Query: 73 LAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHS 132
+ +I+ N ++ D D + +V Q +G F G + VD ++ LL R +
Sbjct: 108 VQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLST 167
Query: 133 I 133
+
Sbjct: 168 L 168
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/84 (22%), Positives = 36/84 (42%)
Query: 24 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 83
A+ I N ++ + Y+ Q +G G+ E +T C LA L+
Sbjct: 107 AVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLS 166
Query: 84 RLDLDALIGWVVFRQGVEGGFQGR 107
L++D+ + +++ +GGF R
Sbjct: 167 TLNIDSAVRFLMRCYNTDGGFGTR 190
Score = 68 (29.0 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 192 SIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDED 242
S A+++++ C D GG D+ D +HT + ++ LS+ L+ D
Sbjct: 266 SDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDDTLESVD 316
>UNIPROTKB|G8JKY6 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:DAAA02008284 Ensembl:ENSBTAT00000024551 Uniprot:G8JKY6
Length = 331
Score = 208 (78.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 105 (42.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 11 HDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 70
HD + + +++ +N++D + V Y+ S Q +G AG+ E ++F
Sbjct: 91 HDPHLLYTLSAVQILTLYDSINVID---INKVVEYVQSLQKEDGSFAGDIWGEIDTRFSF 147
Query: 71 CGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
C +A + L+ + D ++++ I +V+ +GGF R + G A+ +
Sbjct: 148 CAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL 207
Query: 131 HSI 133
H +
Sbjct: 208 HQV 210
Score = 101 (40.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|Q5E9B3 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 EMBL:BT021007
EMBL:BC147953 IPI:IPI00705500 RefSeq:NP_001015646.1
UniGene:Bt.20263 ProteinModelPortal:Q5E9B3 SMR:Q5E9B3 STRING:Q5E9B3
PRIDE:Q5E9B3 GeneID:533276 KEGG:bta:533276 CTD:5876
HOVERGEN:HBG008182 InParanoid:Q5E9B3 OrthoDB:EOG4V6ZGV
NextBio:20875982 Uniprot:Q5E9B3
Length = 331
Score = 208 (78.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 105 (42.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 11 HDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 70
HD + + +++ +N++D + V Y+ S Q +G AG+ E ++F
Sbjct: 91 HDPHLLYTLSAVQILTLYDSINVID---INKVVEYVQSLQKEDGSFAGDIWGEIDTRFSF 147
Query: 71 CGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
C +A + L+ + D ++++ I +V+ +GGF R + G A+ +
Sbjct: 148 CAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL 207
Query: 131 HSI 133
H +
Sbjct: 208 HQV 210
Score = 101 (40.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1P6X0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AAEX03004896 Ensembl:ENSCAFT00000032473 Uniprot:F1P6X0
Length = 331
Score = 208 (78.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 104 (41.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 11 HDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 70
HD + + +++ +N++D + V Y+ S Q +G AG+ E ++F
Sbjct: 91 HDPHLLYTLSAVQILTLYDSINVID---VNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSF 147
Query: 71 CGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 130
C +A + L+ + D ++++ I +V+ +GGF R + G A+ +
Sbjct: 148 CAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL 207
Query: 131 HSI 133
H +
Sbjct: 208 HQV 210
Score = 100 (40.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDVNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>RGD|3530 [details] [associations]
symbol:Rabggtb "Rab geranylgeranyltransferase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001330 InterPro:IPR026873
Pfam:PF00432 RGD:3530 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV CTD:5876 HOVERGEN:HBG008182 EMBL:L10416
EMBL:S62097 IPI:IPI00421632 PIR:B45977 RefSeq:NP_619715.1
UniGene:Rn.107818 ProteinModelPortal:Q08603 SMR:Q08603 DIP:DIP-6138N
STRING:Q08603 PRIDE:Q08603 GeneID:25533 KEGG:rno:25533
InParanoid:Q08603 EvolutionaryTrace:Q08603 NextBio:607037
ArrayExpress:Q08603 Genevestigator:Q08603
GermOnline:ENSRNOG00000009992 Uniprot:Q08603
Length = 331
Score = 208 (78.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 107 (42.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 17 DVRACYTAISVASILNILDDELLQNVGN---YILSCQTYEGGIAGEPGSEAHGGYTFCGL 73
D YT +S IL + D + NV Y+ S Q +G AG+ E ++FC +
Sbjct: 92 DPHLLYT-LSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAV 150
Query: 74 AAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
A + L+ + D ++++ I +V+ +GGF R + G A+ + H +
Sbjct: 151 ATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GG++ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1LSM6 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 PANTHER:PTHR11774:SF5 IPI:IPI00421632
PRIDE:F1LSM6 Ensembl:ENSRNOT00000065997 ArrayExpress:F1LSM6
Uniprot:F1LSM6
Length = 331
Score = 208 (78.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 126 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRLHWI 258
Score = 107 (42.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 17 DVRACYTAISVASILNILDDELLQNVGN---YILSCQTYEGGIAGEPGSEAHGGYTFCGL 73
D YT +S IL + D + NV Y+ S Q +G AG+ E ++FC +
Sbjct: 92 DPHLLYT-LSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAV 150
Query: 74 AAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
A + L+ + D ++++ I +V+ +GGF R + G A+ + H +
Sbjct: 151 ATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GG++ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1M052 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 IPI:IPI00951311 Ensembl:ENSRNOT00000013660
ArrayExpress:F1M052 Uniprot:F1M052
Length = 337
Score = 208 (78.3 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 132 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 191
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 192 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 251
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 252 LASLKIIGRLHWI 264
Score = 107 (42.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 17 DVRACYTAISVASILNILDDELLQNVGN---YILSCQTYEGGIAGEPGSEAHGGYTFCGL 73
D YT +S IL + D + NV Y+ S Q +G AG+ E ++FC +
Sbjct: 98 DPHLLYT-LSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAV 156
Query: 74 AAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
A + L+ + D ++++ I +V+ +GGF R + G A+ + H +
Sbjct: 157 ATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQV 216
Score = 102 (41.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ +EGG++ G + H YT + + L +
Sbjct: 58 YWGLTVMDLMGQLHRMNKEEILVFIKSCQ-HEGGVSASIGHDPHLLYTLSAVQILTLYDS 116
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 117 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 168
Score = 68 (29.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 269 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 313
Score = 45 (20.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 225 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 267
>MGI|MGI:99537 [details] [associations]
symbol:Rabggtb "RAB geranylgeranyl transferase, b subunit"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 MGI:MGI:99537 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 EMBL:CH466532 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
PDB:3PZ1 PDB:3PZ2 PDB:3PZ3 PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:U12922
EMBL:BC132473 EMBL:BC138547 IPI:IPI00133505 PIR:I49116 PIR:JC6177
RefSeq:NP_035361.2 UniGene:Mm.277831 ProteinModelPortal:P53612
SMR:P53612 STRING:P53612 PhosphoSite:P53612 PaxDb:P53612
PRIDE:P53612 Ensembl:ENSMUST00000167111 GeneID:19352 KEGG:mmu:19352
InParanoid:A2RTE6 EvolutionaryTrace:P53612 NextBio:296383
Bgee:P53612 CleanEx:MM_RABGGTB Genevestigator:P53612
GermOnline:ENSMUSG00000038975 Uniprot:P53612
Length = 339
Score = 208 (78.3 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD ++ ++LSC ++GG P
Sbjct: 134 LQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRP 193
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 194 GSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 253
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 254 LASLKIIGRLHWI 266
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 17 DVRACYTAISVASILNILDDELLQNVGN---YILSCQTYEGGIAGEPGSEAHGGYTFCGL 73
D YT +S IL + D + NV Y+ S Q +G AG+ E ++FC +
Sbjct: 100 DPHLLYT-LSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAV 158
Query: 74 AAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
A + L+ + D ++++ I +V+ +GGF R + G A+ + H +
Sbjct: 159 ATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQV 218
Score = 98 (39.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 59 YWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 118
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 119 VHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 170
Score = 68 (29.0 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 271 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 315
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 201 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 241
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 227 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 269
>ZFIN|ZDB-GENE-040426-2116 [details] [associations]
symbol:rabggtb "Rab geranylgeranyltransferase,
beta subunit" species:7955 "Danio rerio" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
ZFIN:ZDB-GENE-040426-2116 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:CT027702
EMBL:BC097066 IPI:IPI00613192 RefSeq:NP_998277.2 UniGene:Dr.79075
SMR:Q4V946 STRING:Q4V946 Ensembl:ENSDART00000099248 GeneID:406386
KEGG:dre:406386 InParanoid:Q4V946 NextBio:20817996 Uniprot:Q4V946
Length = 331
Score = 205 (77.2 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 41/133 (30%), Positives = 67/133 (50%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A++ ++L LD + +++SC ++GG P
Sbjct: 126 LQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRP 185
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + + +++ D L W+ RQ GG GR KL D CYS+W
Sbjct: 186 GSESHAGQIYCCTGFLSVTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 245
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 246 LASLKIIGRIHWI 258
Score = 104 (41.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLSRMNREEIIEFIKSCQHDCGGISASIGHDPHLLYTLSAIQILSLYDS 110
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 133
+ +D+D ++ +V Q +G F G +D +SF ALL + I
Sbjct: 111 VNAIDVDKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVI 162
Score = 103 (41.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 11 HDAGEI------DVRACYT--AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGS 62
HD G I D YT AI + S+ + ++ + V Y+ Q +G AG+
Sbjct: 80 HDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDKWG 139
Query: 63 EAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 104
E ++FC +A + L+ + D +++D + +V+ +GGF
Sbjct: 140 EIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGF 181
Score = 69 (29.3 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPY 254
L+ ++L C + GG D+ D +HT + ++GLS+ L DE P+ P
Sbjct: 263 LRNFILACQDEETGGFADRPGDMVDPFHTLFGVAGLSL-----LGDEQIKPVNPVFCMP- 316
Query: 255 SNVLEPV 261
+VL+ +
Sbjct: 317 EDVLQRI 323
>UNIPROTKB|F1P4E5 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AADN02012381 IPI:IPI00594865 Ensembl:ENSGALT00000018575
Uniprot:F1P4E5
Length = 343
Score = 206 (77.6 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 1 MKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEP 60
++ G+F GEID R + A + ++L LD + ++LSC ++GG P
Sbjct: 138 LQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRP 197
Query: 61 GSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
GSE+H G +C + + ++ ++++D L W+ RQ GG GR KL D CYS+W
Sbjct: 198 GSESHAGQIYCCTGFLAITDQLHQINVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWV 257
Query: 121 GGVFALLRRFHSI 133
++ R H I
Sbjct: 258 LASLKMIGRLHWI 270
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/117 (24%), Positives = 54/117 (46%)
Query: 22 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 81
Y ++ ++ L + + +I SCQ GGI+ G + H YT + +IL
Sbjct: 63 YWGLTAMDLMGQLHRMNKEEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILILYES 122
Query: 82 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI-IGES 137
+D++ ++ +V Q +G F G +D +SF ALL + +I +G++
Sbjct: 123 LHVVDVNKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDAIDVGKA 179
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 17 DVRACYTAISVASILNILDDEL----LQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCG 72
D YT +S IL IL + L + + Y+ S Q +G AG+ E ++FC
Sbjct: 104 DPHLLYT-LSAVQIL-ILYESLHVVDVNKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCA 161
Query: 73 LAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHS 132
A + L+ + D +D+ + +V+ +GGF R + G A+ + H
Sbjct: 162 AATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQ 221
Query: 133 I 133
I
Sbjct: 222 I 222
Score = 66 (28.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 275 LRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 319
>GENEDB_PFALCIPARUM|PFF0120w [details] [associations]
symbol:PFF0120w "putative
geranylgeranyltransferase" species:5833 "Plasmodium falciparum"
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=ISS] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AL844505 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5
RefSeq:XP_966015.1 ProteinModelPortal:C6KSM5
EnsemblProtists:PFF0120w:mRNA GeneID:3885742 KEGG:pfa:PFF0120w
EuPathDB:PlasmoDB:PF3D7_0602500 ProtClustDB:CLSZ2433471
Uniprot:C6KSM5
Length = 379
Score = 204 (76.9 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 6 GAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTY-EGGIAGEPGSEA 64
G+F+ GE+D R Y+A+S +ILN ++ + + +Y+L+ E G + G+E
Sbjct: 169 GSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYAICENGFSWVSGNEP 228
Query: 65 HGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVF 124
H FC +A + LI + ++ + L W+ RQ GGF GR KL D CYS+W
Sbjct: 229 HAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEKLTDTCYSWWIFSTL 288
Query: 125 ALLRRFHSI 133
+L++++ I
Sbjct: 289 IVLKKYNWI 297
Score = 68 (29.0 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 194 ALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSI 232
AL+ Y+LLC +GG+ D D HT + L+ LS+
Sbjct: 301 ALKNYILLCQDIEKGGISDNPDCLPDICHTFFGLAALSL 339
>FB|FBgn0015000 [details] [associations]
symbol:betaggt-I "beta subunit of type I geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004661
"protein geranylgeranyltransferase activity" evidence=ISS]
[GO:0007265 "Ras protein signal transduction" evidence=ISS]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=NAS] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0022008 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0035050 GO:GO:0004661
HSSP:P53610 EMBL:U43587 ProteinModelPortal:Q24172 SMR:Q24172
STRING:Q24172 PaxDb:Q24172 PRIDE:Q24172 FlyBase:FBgn0015000
InParanoid:Q24172 OrthoDB:EOG489333 ArrayExpress:Q24172 Bgee:Q24172
Uniprot:Q24172
Length = 395
Score = 217 (81.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 51/134 (38%), Positives = 72/134 (53%)
Query: 1 MKDPSGAFRMH-DAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGE 59
++ P G+F D E D+R Y A ++ +L+ D + + +I Y+ G + E
Sbjct: 145 VQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQE 204
Query: 60 PGSEAHGGYTFCGLAAMILINEADRLD---LDALIGWVVFRQGVEGGFQGRTNKLVDGCY 116
EAHGG TFC LAA+ L + RLD ++ + W++FRQ GFQGR NK VD CY
Sbjct: 205 LEGEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQ--MDGFQGRPNKPVDTCY 262
Query: 117 SFWQGGVFALLRRF 130
SFW G +L F
Sbjct: 263 SFWIGASLCILNGF 276
>UNIPROTKB|E2QZU5 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392 CTD:5229
KO:K11713 OMA:FILSTQD EMBL:AAEX03007707 RefSeq:XP_538560.2
ProteinModelPortal:E2QZU5 Ensembl:ENSCAFT00000000341 GeneID:481440
KEGG:cfa:481440 NextBio:20856233 Uniprot:E2QZU5
Length = 377
Score = 212 (79.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ NYI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+++ + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMDKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>UNIPROTKB|Q5EAD5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152
eggNOG:COG5029 GO:GO:0004662 EMBL:BT020634 IPI:IPI00715065
RefSeq:NP_001015560.1 UniGene:Bt.17618 ProteinModelPortal:Q5EAD5
SMR:Q5EAD5 PRIDE:Q5EAD5 GeneID:509322 KEGG:bta:509322 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 InParanoid:Q5EAD5 KO:K11713
BindingDB:Q5EAD5 ChEMBL:CHEMBL4347 NextBio:20868922 Uniprot:Q5EAD5
Length = 377
Score = 211 (79.3 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ NYI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>UNIPROTKB|F1RLE8 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:CU693413 EMBL:CU694231 Ensembl:ENSSSCT00000015533
Uniprot:F1RLE8
Length = 318
Score = 206 (77.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ +YI +Y+ G+A G E+
Sbjct: 100 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLES 159
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 160 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 217
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 218 GATLKLLKIF 227
>MGI|MGI:1917514 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I,
beta subunit" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042277 "peptide
binding" evidence=ISO] [GO:0045787 "positive regulation of cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=ISO] InterPro:IPR001330 Pfam:PF00432
MGI:MGI:1917514 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0008152 GO:GO:0042277 GO:GO:0045787 eggNOG:COG5029
GO:GO:0004662 GO:GO:0019840 GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:AK081731 IPI:IPI00225757 RefSeq:NP_766215.1
UniGene:Mm.262096 UniGene:Mm.393044 ProteinModelPortal:Q8BUY9
SMR:Q8BUY9 STRING:Q8BUY9 PhosphoSite:Q8BUY9 PaxDb:Q8BUY9
PRIDE:Q8BUY9 Ensembl:ENSMUST00000025354 GeneID:225467
KEGG:mmu:225467 UCSC:uc008evk.1 InParanoid:Q8BUY9 BindingDB:Q8BUY9
ChEMBL:CHEMBL2295 NextBio:377678 Bgee:Q8BUY9 Genevestigator:Q8BUY9
GermOnline:ENSMUSG00000024477 Uniprot:Q8BUY9
Length = 377
Score = 206 (77.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ +YI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>RGD|621754 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I, beta
subunit" species:10116 "Rattus norvegicus" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 206 (77.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ +YI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>UNIPROTKB|P53610 [details] [associations]
symbol:Pggt1b "Geranylgeranyl transferase type-1 subunit
beta" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 206 (77.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ +YI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>UNIPROTKB|P53609 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=TAS] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144
GO:GO:0008284 GO:GO:0008270 GO:GO:0034097 GO:GO:0042277
GO:GO:0045787 eggNOG:COG5029 DrugBank:DB00175 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 GO:GO:0019840 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
EMBL:L25441 EMBL:AY780790 EMBL:AC008494 IPI:IPI00022759
IPI:IPI00549741 PIR:A53044 RefSeq:NP_005014.2 UniGene:Hs.254006
ProteinModelPortal:P53609 SMR:P53609 STRING:P53609
PhosphoSite:P53609 DMDM:259016302 PaxDb:P53609 PRIDE:P53609
DNASU:5229 Ensembl:ENST00000379615 Ensembl:ENST00000419445
GeneID:5229 KEGG:hsa:5229 UCSC:uc003kqw.4 UCSC:uc010jch.3
GeneCards:GC05M114575 H-InvDB:HIX0032034 HGNC:HGNC:8895
HPA:HPA030646 MIM:602031 neXtProt:NX_P53609 PharmGKB:PA33233
InParanoid:P53609 OrthoDB:EOG4KD6MC PhylomeDB:P53609
BindingDB:P53609 ChEMBL:CHEMBL4135 GenomeRNAi:5229 NextBio:20214
Bgee:P53609 CleanEx:HS_PGGT1B Genevestigator:P53609
GermOnline:ENSG00000164219 Uniprot:P53609
Length = 377
Score = 205 (77.2 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 45/130 (34%), Positives = 71/130 (54%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ YI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 GGVFALLRRF 130
G LL+ F
Sbjct: 277 GATLKLLKIF 286
>UNIPROTKB|O18197 [details] [associations]
symbol:Y48E1B.3 "Protein Y48E1B.3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152 EMBL:Z93393
GeneTree:ENSGT00530000063392 HOGENOM:HOG000180333 KO:K11713
HSSP:P53610 OMA:FILSTQD GeneID:174999 KEGG:cel:CELE_Y48E1B.3
CTD:174999 PIR:T27022 RefSeq:NP_001254397.1
ProteinModelPortal:O18197 SMR:O18197 DIP:DIP-26836N IntAct:O18197
MINT:MINT-1088947 EnsemblMetazoa:Y48E1B.3a UCSC:Y48E1B.3
WormBase:Y48E1B.3a NextBio:886354 ArrayExpress:O18197
Uniprot:O18197
Length = 360
Score = 204 (76.9 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 5 SGAFRMHDAG-EIDVRACYTAISVASILNILDDELLQ--NVGNYILSCQTYEGGIAGEPG 61
+G F G E D+R + A++++ IL+ ++ + + ++ +GGI PG
Sbjct: 152 NGCFWSQGVGSESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPG 211
Query: 62 SEAHGGYTFCGLAAMILINEA------DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGC 115
E+HGG TFC +A++ L N R D+D LI W + +Q + GF GR +K D C
Sbjct: 212 DESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQDI--GFHGRAHKPDDSC 269
Query: 116 YSFWQGGVFALLRRFHSI 133
Y+FW G +L +H +
Sbjct: 270 YAFWIGATLKILNAYHLV 287
>UNIPROTKB|F1NE58 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:AADN02074198 EMBL:AADN02074199 EMBL:AADN02074200
EMBL:AADN02074201 IPI:IPI00575455 Ensembl:ENSGALT00000013349
Uniprot:F1NE58
Length = 332
Score = 198 (74.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 45/130 (34%), Positives = 70/130 (53%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +L+ ++ +YI +Y+ G+A G E+
Sbjct: 113 GSFCAVLEGSENDMRFVYCASCICYMLDNWSGMDMKKAIDYIRRSMSYDNGLAQGAGLES 172
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L + W V RQ + G+ GR NK VD CYSFW
Sbjct: 173 HGGSTFCGIASLCLMGKLEEVFSEKELSRIGRWCVMRQ--QNGYHGRPNKPVDTCYSFWV 230
Query: 121 GGVFALLRRF 130
G LL F
Sbjct: 231 GATLKLLNLF 240
>UNIPROTKB|D3DQ78 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
EMBL:CH471059 EMBL:AL357314 GO:GO:0018344 GO:GO:0004663
PANTHER:PTHR11774:SF5 UniGene:Hs.78948 HGNC:HGNC:9796
ChiTaRS:RABGGTB IPI:IPI01013423 SMR:D3DQ78 Ensembl:ENST00000535300
Uniprot:D3DQ78
Length = 157
Score = 145 (56.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 52 YEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKL 111
++GG PGSE+H G +C + + ++ +++ D L W+ RQ GG GR KL
Sbjct: 3 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 62
Query: 112 VDGCYSFWQGGVFALLRRFHSI 133
D CYS+W ++ R H I
Sbjct: 63 PDVCYSWWVLASLKIIGRLHWI 84
Score = 69 (29.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 195 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 239
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 89 LRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 133
>UNIPROTKB|F1N4H5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152
GeneTree:ENSGT00530000063392 IPI:IPI00715065 OMA:FILSTQD
EMBL:DAAA02027677 EMBL:DAAA02027678 EMBL:DAAA02027679
EMBL:DAAA02027680 Ensembl:ENSBTAT00000002466 Uniprot:F1N4H5
Length = 377
Score = 199 (75.1 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +LN ++ NYI +Y+ G+A G E+
Sbjct: 159 GSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLES 218
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFCG+A++ L+ + + + +L+ + W + RQ + G+ GR NK VD CYSFW
Sbjct: 219 HGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWV 276
Query: 121 G 121
G
Sbjct: 277 G 277
>WB|WBGene00013002 [details] [associations]
symbol:Y48E1B.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR001330
Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0008152 EMBL:Z93393 GeneTree:ENSGT00530000063392 KO:K11713
GeneID:174999 KEGG:cel:CELE_Y48E1B.3 CTD:174999
RefSeq:NP_001254398.1 ProteinModelPortal:B7WNB1 SMR:B7WNB1
EnsemblMetazoa:Y48E1B.3c.1 EnsemblMetazoa:Y48E1B.3c.2
WormBase:Y48E1B.3c ArrayExpress:B7WNB1 Uniprot:B7WNB1
Length = 883
Score = 204 (76.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 5 SGAFRMHDAG-EIDVRACYTAISVASILNILDDELLQ--NVGNYILSCQTYEGGIAGEPG 61
+G F G E D+R + A++++ IL+ ++ + + ++ +GGI PG
Sbjct: 675 NGCFWSQGVGSESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPG 734
Query: 62 SEAHGGYTFCGLAAMILINEA------DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGC 115
E+HGG TFC +A++ L N R D+D LI W + +Q + GF GR +K D C
Sbjct: 735 DESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQDI--GFHGRAHKPDDSC 792
Query: 116 YSFWQGGVFALLRRFHSI 133
Y+FW G +L +H +
Sbjct: 793 YAFWIGATLKILNAYHLV 810
>ZFIN|ZDB-GENE-050913-85 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase
type I, beta subunit" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 ZFIN:ZDB-GENE-050913-85
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152
eggNOG:COG5029 CTD:5229 HOGENOM:HOG000180333 HOVERGEN:HBG008181
KO:K11713 OrthoDB:EOG4KD6MC EMBL:BC097132 IPI:IPI00484889
RefSeq:NP_001025426.1 UniGene:Dr.78336 ProteinModelPortal:Q4V8Z9
SMR:Q4V8Z9 GeneID:570808 KEGG:dre:570808 NextBio:20890306
ArrayExpress:Q4V8Z9 Uniprot:Q4V8Z9
Length = 355
Score = 184 (69.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 46/130 (35%), Positives = 67/130 (51%)
Query: 6 GAF-RMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEA 64
G+F + + E D+R Y A + +L+ Q +YI +++ GI G E+
Sbjct: 148 GSFYAVPEGSENDMRFVYCAACICFMLDDWSGMDRQKTIDYIRRSTSFDFGIGQGAGLES 207
Query: 65 HGGYTFCGLAAMILINEADRL----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQ 120
HGG TFC +A++ ++ + + +L L W V RQ + GFQGR NK VD CYSFW
Sbjct: 208 HGGSTFCAVASLCMMGKLREVFSERELGRLRRWCVLRQ--QNGFQGRPNKPVDTCYSFWV 265
Query: 121 GGVFALLRRF 130
G LL F
Sbjct: 266 GATLQLLDVF 275
Score = 46 (21.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 258 LEPVHPVFNIVL---DRYHEAHEFFSRS 282
L+PVH NI L D HE + RS
Sbjct: 326 LQPVHAALNISLRASDSLRRLHECWRRS 353
>DICTYBASE|DDB_G0269726 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase type
I" species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004659 "prenyltransferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 dictyBase:DDB_G0269726
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152 eggNOG:COG5029
GO:GO:0004662 KO:K11713 RefSeq:XP_646228.1 HSSP:P53610
ProteinModelPortal:Q55DA3 GeneID:8617182 KEGG:ddi:DDB_G0269726
OMA:FILSTQD ProtClustDB:CLSZ2431398 Uniprot:Q55DA3
Length = 352
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 43/124 (34%), Positives = 69/124 (55%)
Query: 12 DAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFC 71
+ G+ D+R ++A +++ IL+ ++ +YI SC +YE P EAHGG T+C
Sbjct: 160 NVGDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYC 219
Query: 72 GLAAMILINEADRLD--LDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 129
+A++ L+ D L+ + L W+V +Q GF GRTNK D CY+FW G ++ R
Sbjct: 220 AIASLSLLGRLDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPDTCYAFWIGASLMMIDR 277
Query: 130 FHSI 133
+ I
Sbjct: 278 YDLI 281
>POMBASE|SPAC2E1P5.04c [details] [associations]
symbol:cwg2 "geranylgeranyltransferase I beta subunit
Cwg2" species:4896 "Schizosaccharomyces pombe" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=NAS]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0009250 "glucan biosynthetic process" evidence=IMP] [GO:0018344
"protein geranylgeranylation" evidence=IC] [GO:0034411 "cell wall
(1->3)-beta-D-glucan biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071963
"establishment or maintenance of cell polarity regulating cell
shape" evidence=IMP] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR001330 Pfam:PF00432
PomBase:SPAC2E1P5.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006612 GO:GO:0071963 GO:GO:0034411
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180333 KO:K11713 EMBL:Z12155 PIR:S41686
RefSeq:NP_594142.1 ProteinModelPortal:P32434 STRING:P32434
EnsemblFungi:SPAC2E1P5.04c.1 GeneID:2541514 KEGG:spo:SPAC2E1P5.04c
OMA:HDLRFCY OrthoDB:EOG4WQ4BS NextBio:20802612 Uniprot:P32434
Length = 355
Score = 133 (51.9 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 2 KDPSGAFR---MHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAG 58
K G FR + + D+R Y A ++AS+L+ + L ++ YI SCQ YEGG +
Sbjct: 130 KTSQGHFRSIAVPSCSDQDMRQLYMATTIASLLDFSLSDPLCSI-QYIKSCQRYEGGFSL 188
Query: 59 EPGSEAHGGYTFCGLAAMILI 79
P EAH G TFC LA+ LI
Sbjct: 189 LPYGEAHAGATFCALASWSLI 209
Score = 96 (38.9 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 87 LDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFW 119
++ LI W+ RQ GG GRTNK VD CY++W
Sbjct: 234 VERLIRWLASRQLSSGGLNGRTNKDVDTCYAYW 266
Score = 40 (19.1 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 188 PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLS 231
P L++YLLL +Q GG + D H+ L ++
Sbjct: 278 PFIDGGELEKYLLLHAQHALGGFSKTPGEFPDVLHSALGLYAMA 321
>CGD|CAL0001576 [details] [associations]
symbol:CDC43 species:5476 "Candida albicans" [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 KO:K11713 EMBL:AACQ01000309
RefSeq:XP_710190.1 PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5
STRING:Q59KC5 GeneID:3648206 KEGG:cal:CaO19.1803
EvolutionaryTrace:Q59KC5 Uniprot:Q59KC5
Length = 384
Score = 87 (35.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 3 DPSGAFRMHDAGEIDVRACYTAISVASIL--------------NILDDELLQNVGNYILS 48
+ +G ++ + GE D+R CY A+ + ++ N D +L+ ++ +IL
Sbjct: 146 EENGDYKQY--GEPDLRVCYMALLIRHLMKYDANNNNNNREDSNETDIDLI-SLQQFILD 202
Query: 49 CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ 98
GG + E+H G+TFC +A++ L+N L + W++ RQ
Sbjct: 203 RININGGFSSTIMDESHLGFTFCAIASLKLLNYPLE-KLKSTKEWLIHRQ 251
Score = 78 (32.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 102 GGFQGRTNKLVDGCYSFWQGG 122
GGF GR NKL D CYS+W G
Sbjct: 277 GGFNGRENKLSDTCYSWWCTG 297
>UNIPROTKB|Q59KC5 [details] [associations]
symbol:CDC43 "Putative uncharacterized protein CDC43"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA]
InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662
GO:GO:0018344 KO:K11713 EMBL:AACQ01000309 RefSeq:XP_710190.1
PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5 STRING:Q59KC5
GeneID:3648206 KEGG:cal:CaO19.1803 EvolutionaryTrace:Q59KC5
Uniprot:Q59KC5
Length = 384
Score = 87 (35.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 3 DPSGAFRMHDAGEIDVRACYTAISVASIL--------------NILDDELLQNVGNYILS 48
+ +G ++ + GE D+R CY A+ + ++ N D +L+ ++ +IL
Sbjct: 146 EENGDYKQY--GEPDLRVCYMALLIRHLMKYDANNNNNNREDSNETDIDLI-SLQQFILD 202
Query: 49 CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ 98
GG + E+H G+TFC +A++ L+N L + W++ RQ
Sbjct: 203 RININGGFSSTIMDESHLGFTFCAIASLKLLNYPLE-KLKSTKEWLIHRQ 251
Score = 78 (32.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 102 GGFQGRTNKLVDGCYSFWQGG 122
GGF GR NKL D CYS+W G
Sbjct: 277 GGFNGRENKLSDTCYSWWCTG 297
>SGD|S000003123 [details] [associations]
symbol:CDC43 "Beta subunit of geranylgeranyltransferase type
I" species:4932 "Saccharomyces cerevisiae" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=TAS] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=TAS] [GO:0004661
"protein geranylgeranyltransferase activity" evidence=IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030010 "establishment of cell polarity"
evidence=TAS] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 SGD:S000003123
GO:GO:0007264 EMBL:BK006941 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006874 GO:GO:0030010 EMBL:Z48618
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
HOGENOM:HOG000180333 KO:K11713 OrthoDB:EOG4WQ4BS EMBL:M31114
EMBL:M74109 EMBL:Z72677 PIR:A40875 RefSeq:NP_011360.1
ProteinModelPortal:P18898 SMR:P18898 DIP:DIP-1232N IntAct:P18898
MINT:MINT-396220 STRING:P18898 PaxDb:P18898 PeptideAtlas:P18898
EnsemblFungi:YGL155W GeneID:852722 KEGG:sce:YGL155W CYGD:YGL155w
OMA:TCYSWWC NextBio:972105 Genevestigator:P18898 GermOnline:YGL155W
Uniprot:P18898
Length = 376
Score = 105 (42.0 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 17 DVRACYTAISVASILNILD----DELL--QNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 70
D+R CY A+++ I DE + + + YI+S Q Y G +E H GYT
Sbjct: 164 DLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYNGAFGAH--NEPHSGYTS 221
Query: 71 CGLAAMILINEADRLD---LDALIGWVVFRQGVEGG---FQGRTNKLVD 113
C L+ + L++ ++L + I W++ RQ G F+ N D
Sbjct: 222 CALSTLALLSSLEKLSDKFKEDTITWLLHRQVSSHGCMKFESELNASYD 270
Score = 44 (20.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 204 QDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSW 237
Q GG + + K D + +CL+ L + W
Sbjct: 271 QSDDGGFQGRENKFADTCYAFWCLNSLHLLTKDW 304
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 282 263 0.00091 114 3 11 22 0.43 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 612 (65 KB)
Total size of DFA: 226 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.34u 0.10s 20.44t Elapsed: 00:00:01
Total cpu time: 20.35u 0.10s 20.45t Elapsed: 00:00:01
Start: Fri May 10 03:14:59 2013 End: Fri May 10 03:15:00 2013