BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023450
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKESKKLEEETTMKV
HPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSD
ADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWR
FRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGGGGDGSENGEFRGGGQEFMP
SAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT

High Scoring Gene Products

Symbol, full name Information P value
HSP1
AT4G14830 		protein from Arabidopsis thaliana 6.7e-33
AT3G22530 protein from Arabidopsis thaliana 4.2e-31

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023450
        (282 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2130369 - symbol:HSP1 "AT4G14830" species:3702...   359  6.7e-33   1
TAIR|locus:2077036 - symbol:AT3G22530 "AT3G22530" species...   342  4.2e-31   1


>TAIR|locus:2130369 [details] [associations]
            symbol:HSP1 "AT4G14830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161540 EMBL:Z97337
            EMBL:BT012599 EMBL:BT014827 IPI:IPI00532875 PIR:D71411
            RefSeq:NP_193219.1 UniGene:At.33234 UniGene:At.33235 IntAct:O23338
            EnsemblPlants:AT4G14830.1 GeneID:827140 KEGG:ath:AT4G14830
            TAIR:At4g14830 eggNOG:NOG291390 HOGENOM:HOG000239751
            InParanoid:O23338 OMA:LIHHARD ProtClustDB:CLSN2685362
            Genevestigator:O23338 Uniprot:O23338
        Length = 152

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 85/154 (55%), Positives = 98/154 (63%)

Query:    58 MKVHPVPTKKRNNIAIQYFDMXXXXXXXXXXXXXXXSTGFHNKKLRRLPHIFTRVLELPF 117
             MK+HP+P  + NN  I +                   T    KKLRRLPHIF+RVLELP 
Sbjct:     1 MKIHPLPRNENNNNLIHH---------------ARDPTREPGKKLRRLPHIFSRVLELPL 45

Query:   118 RSDADVAVEESPDYFKFVAETDGMGE--VRAHMVEIHPGVTKIVIRPNGCVXXXXXXXXX 175
             +SDADVAVEES D F+FVAETDG G   VRA+MVEIHPGVTKI++R NG           
Sbjct:    46 KSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDEL 105

Query:   176 XX-MWRFRLPESTRPELASAVFE-DGELIVTVPK 207
                +WRFRLPESTRPEL +   + DGELIVTVPK
Sbjct:   106 ELDVWRFRLPESTRPELVTVDCDGDGELIVTVPK 139


>TAIR|locus:2077036 [details] [associations]
            symbol:AT3G22530 "AT3G22530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005774 "vacuolar membrane"
            evidence=IDA] GO:GO:0005774 EMBL:CP002686 ProtClustDB:CLSN2685362
            EMBL:AY072391 EMBL:BT000171 IPI:IPI00533742 RefSeq:NP_566710.1
            UniGene:At.66480 ProteinModelPortal:Q8VY73 SMR:Q8VY73 IntAct:Q8VY73
            PRIDE:Q8VY73 EnsemblPlants:AT3G22530.1 GeneID:821824
            KEGG:ath:AT3G22530 TAIR:At3g22530 InParanoid:Q8VY73 OMA:PIPRNIN
            PhylomeDB:Q8VY73 ArrayExpress:Q8VY73 Genevestigator:Q8VY73
            Uniprot:Q8VY73
        Length = 198

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 72/113 (63%), Positives = 82/113 (72%)

Query:   100 KKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGM----GEVRAHMVEIHPGV 155
             K LRRLPHIF RVLELP RS+ADVAVEE  D F+FVAET G+    GE+RA+MVEIHPG+
Sbjct:    59 KNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGI 118

Query:   156 TKIVIRPNGCVXXXXXXXXXXX-MWRFRLPESTRPELASAVFEDGELIVTVPK 207
             TKIV+R NG              +WRFRLPESTRPEL +    DG+LIVTVPK
Sbjct:   119 TKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPK 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       209   0.00079  112 3  11 22  0.44    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  156 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.78u 0.11s 14.89t   Elapsed:  00:00:01
  Total cpu time:  14.78u 0.11s 14.89t   Elapsed:  00:00:01
  Start:  Fri May 10 03:24:50 2013   End:  Fri May 10 03:24:51 2013

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