Query 023452
Match_columns 282
No_of_seqs 175 out of 687
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 07:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ys8_A RAB-related GTP-binding 99.4 9.2E-13 3.2E-17 102.2 6.5 55 90-144 26-87 (90)
2 2cug_A Mkiaa0962 protein; DNAJ 99.4 3.1E-12 1.1E-16 98.4 9.4 56 89-144 15-77 (88)
3 2yua_A Williams-beuren syndrom 99.3 1.6E-12 5.4E-17 102.2 7.5 60 85-144 11-78 (99)
4 1wjz_A 1700030A21RIK protein; 99.3 9.1E-13 3.1E-17 101.8 5.1 57 86-142 11-81 (94)
5 2dn9_A DNAJ homolog subfamily 99.3 5.6E-12 1.9E-16 94.6 7.9 57 88-144 4-68 (79)
6 2guz_A Mitochondrial import in 99.3 1.4E-12 4.7E-17 97.2 3.9 57 86-142 9-70 (71)
7 2ctr_A DNAJ homolog subfamily 99.3 6.8E-12 2.3E-16 96.5 7.6 55 89-143 5-66 (88)
8 2ctp_A DNAJ homolog subfamily 99.3 5.3E-12 1.8E-16 94.7 6.4 56 88-143 4-66 (78)
9 2och_A Hypothetical protein DN 99.3 1E-11 3.5E-16 92.2 7.1 54 89-142 6-64 (73)
10 1hdj_A Human HSP40, HDJ-1; mol 99.3 6.6E-12 2.3E-16 93.9 6.1 54 90-143 2-62 (77)
11 2ctw_A DNAJ homolog subfamily 99.2 2.4E-11 8.1E-16 97.3 9.0 57 88-144 14-78 (109)
12 2ctq_A DNAJ homolog subfamily 99.2 2.7E-11 9.3E-16 97.2 9.4 60 84-143 13-80 (112)
13 2ej7_A HCG3 gene; HCG3 protein 99.2 7.5E-12 2.6E-16 94.5 5.3 54 89-142 7-69 (82)
14 2o37_A Protein SIS1; HSP40, J- 99.2 1.5E-11 5E-16 95.5 6.7 54 89-142 6-64 (92)
15 2dmx_A DNAJ homolog subfamily 99.2 2.4E-11 8.2E-16 93.9 6.8 56 89-144 7-71 (92)
16 1faf_A Large T antigen; J doma 99.2 2.8E-11 9.5E-16 92.1 5.6 56 89-144 9-70 (79)
17 2lgw_A DNAJ homolog subfamily 99.1 7.5E-11 2.6E-15 93.2 7.1 53 91-143 2-63 (99)
18 1iur_A KIAA0730 protein; DNAJ 99.1 2.4E-11 8.4E-16 94.6 3.7 55 86-140 11-74 (88)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.1 6.5E-11 2.2E-15 94.2 6.1 54 90-143 14-79 (109)
20 1bq0_A DNAJ, HSP40; chaperone, 99.1 2.6E-11 8.8E-16 95.8 1.8 55 90-144 2-64 (103)
21 2l6l_A DNAJ homolog subfamily 99.1 1.3E-10 4.5E-15 97.6 6.0 57 86-142 5-75 (155)
22 3apq_A DNAJ homolog subfamily 99.0 2.6E-10 8.9E-15 97.4 6.1 54 91-144 2-63 (210)
23 1gh6_A Large T antigen; tumor 99.0 1.4E-10 4.7E-15 94.4 2.3 56 89-144 6-67 (114)
24 2qwo_B Putative tyrosine-prote 98.9 3.9E-10 1.3E-14 88.9 3.5 48 91-138 33-91 (92)
25 3lz8_A Putative chaperone DNAJ 98.9 1.3E-10 4.5E-15 109.3 0.0 56 87-142 24-86 (329)
26 2pf4_E Small T antigen; PP2A, 98.9 2.5E-10 8.6E-15 99.4 0.9 57 88-144 8-70 (174)
27 3hho_A CO-chaperone protein HS 98.8 4.3E-09 1.5E-13 90.7 6.6 55 90-144 3-72 (174)
28 1n4c_A Auxilin; four helix bun 98.8 3.4E-09 1.2E-13 92.9 4.0 52 91-142 117-179 (182)
29 3ag7_A Putative uncharacterize 98.7 5.2E-09 1.8E-13 84.0 3.4 47 91-138 41-102 (106)
30 1fpo_A HSC20, chaperone protei 98.7 1.2E-08 4.2E-13 87.7 5.8 52 92-143 2-68 (171)
31 3bvo_A CO-chaperone protein HS 98.7 2.7E-08 9.4E-13 88.2 8.1 54 90-143 42-110 (207)
32 2guz_B Mitochondrial import in 98.7 1.5E-08 5E-13 75.3 4.8 51 89-139 2-59 (65)
33 3apo_A DNAJ homolog subfamily 98.6 1.3E-08 4.5E-13 102.4 2.0 57 88-144 18-82 (780)
34 3uo3_A J-type CO-chaperone JAC 98.5 1.1E-07 3.7E-12 82.7 5.5 59 86-144 6-76 (181)
35 2y4t_A DNAJ homolog subfamily 96.9 0.00052 1.8E-08 61.2 3.7 54 91-144 382-446 (450)
36 2pzi_A Probable serine/threoni 84.4 0.48 1.6E-05 46.9 2.8 44 91-134 629-674 (681)
37 4gic_A HDH, histidinol dehydro 30.3 44 0.0015 32.5 4.3 38 103-148 74-111 (423)
38 1kae_A HDH, histidinol dehydro 28.0 61 0.0021 31.7 4.8 38 103-148 68-105 (434)
39 3vem_A Helicase protein MOM1; 23.2 74 0.0025 25.8 3.7 13 126-138 70-82 (115)
No 1
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=9.2e-13 Score=102.20 Aligned_cols=55 Identities=20% Similarity=0.234 Sum_probs=48.1
Q ss_pred CCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh-------hHHHHHHHHHHHHhhHHhhh
Q 023452 90 VRDPYKRLGISREASEEEIQAARNFLVQKYAGHKP-------SIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 90 ~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~-------~~~~IEaAYD~Ilm~~L~~R 144 (282)
..|+|++|||+++|+.+|||+||++|..+||||.. ++.+|+.||+.+....-|.+
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 47999999999999999999999999999999953 68899999999776554433
No 2
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=3.1e-12 Score=98.43 Aligned_cols=56 Identities=27% Similarity=0.326 Sum_probs=49.4
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhhHHhhh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
...|||++|||+++|+.+||++||++|..+||||. +.+.+|++||+.+.....|..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 77 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHH
Confidence 45799999999999999999999999999999995 468899999999887665543
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.6e-12 Score=102.24 Aligned_cols=60 Identities=17% Similarity=0.115 Sum_probs=51.9
Q ss_pred CCCCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh--------hHHHHHHHHHHHHhhHHhhh
Q 023452 85 FPRINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHKP--------SIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 85 fpr~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~--------~~~~IEaAYD~Ilm~~L~~R 144 (282)
-..+...|+|++|||+++|+.+||++||++|..+||||.. ++.+|+.||+.|.....|+.
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 78 (99)
T 2yua_A 11 DCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRK 78 (99)
T ss_dssp CCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred CCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 3456778999999999999999999999999999999953 68899999999877665544
No 4
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.33 E-value=9.1e-13 Score=101.81 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=49.7
Q ss_pred CCCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hhHHHHHHHHHHHHhhHHh
Q 023452 86 PRINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------------PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 86 pr~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------------~~~~~IEaAYD~Ilm~~L~ 142 (282)
..+...|+|++|||+++|+.+||++||++|..+||||. +.+.+|+.||+.|.....|
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R 81 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETK 81 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHH
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHH
Confidence 44677899999999999999999999999999999997 3578899999998765433
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=5.6e-12 Score=94.64 Aligned_cols=57 Identities=25% Similarity=0.299 Sum_probs=49.6
Q ss_pred CCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhhHHhhh
Q 023452 88 INVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 88 ~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
+...|+|++|||+++|+.+||++||++|..+||||. +.+.+|++||+.+.....|..
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 68 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 345799999999999999999999999999999993 358899999999887665543
No 6
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.4e-12 Score=97.24 Aligned_cols=57 Identities=12% Similarity=0.225 Sum_probs=50.1
Q ss_pred CCCCCCChhhhhCCCC-CCCHHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhhHHh
Q 023452 86 PRINVRDPYKRLGISR-EASEEEIQAARNFLVQKYAGHK----PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 86 pr~~~~dPYe~LGVs~-~AS~eEI~~A~~rL~~~y~~D~----~~~~~IEaAYD~Ilm~~L~ 142 (282)
+.|+.+|+|++|||++ +||.+||++||++|..+||||. +.+.+|++|||.|....+|
T Consensus 9 ~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 9 PKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp SSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence 3577789999999999 7999999999999999999984 5789999999998775543
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=6.8e-12 Score=96.52 Aligned_cols=55 Identities=25% Similarity=0.305 Sum_probs=48.5
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhhHHhh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
...|+|++|||+++|+.+||++||++|.++||||. +.+.+|++||+.|.....|+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHH
Confidence 45799999999999999999999999999999994 36889999999987765443
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=5.3e-12 Score=94.71 Aligned_cols=56 Identities=29% Similarity=0.316 Sum_probs=48.9
Q ss_pred CCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhhHHhh
Q 023452 88 INVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 88 ~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
++..|+|++|||+++|+.+||++||+++..+||||. +.+.+|++||+.+.....|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 346899999999999999999999999999999995 36889999999887765544
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.26 E-value=1e-11 Score=92.19 Aligned_cols=54 Identities=22% Similarity=0.286 Sum_probs=47.7
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhhHHh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-----PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-----~~~~~IEaAYD~Ilm~~L~ 142 (282)
...|+|++|||+++|+.+||++||++|..+||||. +.+.+|+.||+.+.....|
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R 64 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKR 64 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHH
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHH
Confidence 34789999999999999999999999999999995 5688999999987765544
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.26 E-value=6.6e-12 Score=93.94 Aligned_cols=54 Identities=31% Similarity=0.382 Sum_probs=47.6
Q ss_pred CCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhhHHhh
Q 023452 90 VRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 90 ~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
..|+|++|||+++||.+||++||++|..+||||. +.+.+|++||+.+.....|.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 62 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 3789999999999999999999999999999995 46889999999977665544
No 11
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=2.4e-11 Score=97.28 Aligned_cols=57 Identities=21% Similarity=0.296 Sum_probs=49.8
Q ss_pred CCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhhHHhhh
Q 023452 88 INVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 88 ~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
+...|+|++|||+++|+.+||++||++|..+||||. +++.+|+.||+.|.....|+.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~ 78 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 456899999999999999999999999999999994 357899999999877665554
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=97.24 Aligned_cols=60 Identities=17% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCCCCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhhHHhh
Q 023452 84 IFPRINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 84 ~fpr~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
....++..|+|++|||+++|+.+||++||++|..+||||. +++.+|+.||+.|.....|+
T Consensus 13 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 80 (112)
T 2ctq_A 13 NYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80 (112)
T ss_dssp CCCCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred hccccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 3445667899999999999999999999999999999984 35789999999987765544
No 13
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=7.5e-12 Score=94.53 Aligned_cols=54 Identities=26% Similarity=0.281 Sum_probs=47.3
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhhHHh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK---------PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~ 142 (282)
...|+|++|||+++|+.+||++||++|..+||||. +.+.+|+.||+.|.....|
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R 69 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHH
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 45799999999999999999999999999999994 2578899999998765444
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.22 E-value=1.5e-11 Score=95.52 Aligned_cols=54 Identities=22% Similarity=0.255 Sum_probs=48.0
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhhHHh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-----PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-----~~~~~IEaAYD~Ilm~~L~ 142 (282)
...|+|++|||+++|+.+||++||++|.++||||. +++.+|++||+.|.....|
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R 64 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKR 64 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHH
Confidence 45799999999999999999999999999999985 4688999999998765544
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=93.89 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=48.7
Q ss_pred CCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhhHHhhh
Q 023452 89 NVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK---------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
...|+|++|||+++|+.+||++||++|.++||||. +.+.+|+.||+.|.....|..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 71 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 34799999999999999999999999999999994 257889999999887665543
No 16
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.16 E-value=2.8e-11 Score=92.09 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=49.2
Q ss_pred CCCChhhhhCCCCC--CCHHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhhHHhhh
Q 023452 89 NVRDPYKRLGISRE--ASEEEIQAARNFLVQKYAGHK----PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 89 ~~~dPYe~LGVs~~--AS~eEI~~A~~rL~~~y~~D~----~~~~~IEaAYD~Ilm~~L~~R 144 (282)
+.+++|++|||+++ ||.+||++||++|..+||||. +++.+|+.||+.+...-.+.|
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH
Confidence 44789999999999 999999999999999999985 579999999999877555554
No 17
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.14 E-value=7.5e-11 Score=93.19 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=46.8
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhhHHhh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHK---------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
.|+|++|||+++||.+||++||++|..+||||. +.+.+|++||+.+.....|+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~ 63 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 589999999999999999999999999999994 25788999999987765543
No 18
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.13 E-value=2.4e-11 Score=94.63 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=47.8
Q ss_pred CCCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh---------hhHHHHHHHHHHHHhhH
Q 023452 86 PRINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK---------PSIDAIESAHDKIIMQK 140 (282)
Q Consensus 86 pr~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~---------~~~~~IEaAYD~Ilm~~ 140 (282)
..++.+|.|++|||+++||.+||++||++|..+||||. +++.+|+.||+.|....
T Consensus 11 ~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~ 74 (88)
T 1iur_A 11 RGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp SSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 34566899999999999999999999999999999983 35789999999976653
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.12 E-value=6.5e-11 Score=94.20 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=47.8
Q ss_pred CCChhhhhCCCCCC-CHHHHHHHHHHHHHHhCCCh-----------hhHHHHHHHHHHHHhhHHhh
Q 023452 90 VRDPYKRLGISREA-SEEEIQAARNFLVQKYAGHK-----------PSIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 90 ~~dPYe~LGVs~~A-S~eEI~~A~~rL~~~y~~D~-----------~~~~~IEaAYD~Ilm~~L~~ 143 (282)
..|+|++|||+++| |.+||++||++|..+||||. +.+.+|+.||+.|.....|+
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~ 79 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT 79 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 47999999999999 99999999999999999993 35789999999987765553
No 20
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.07 E-value=2.6e-11 Score=95.80 Aligned_cols=55 Identities=27% Similarity=0.356 Sum_probs=48.3
Q ss_pred CCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------hhHHHHHHHHHHHHhhHHhhh
Q 023452 90 VRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 90 ~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
..|+|++|||+++||.+||++||++|.++||||. +++.+|++||+.|.....|+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 64 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 3789999999999999999999999999999995 257889999999887665544
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.07 E-value=1.3e-10 Score=97.58 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=49.1
Q ss_pred CCCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hhHHHHHHHHHHHHhhHHh
Q 023452 86 PRINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK--------------PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 86 pr~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~--------------~~~~~IEaAYD~Ilm~~L~ 142 (282)
+.+...|+|++|||+++|+.+|||+||++|.++||||+ +++.+|++||+.+.....|
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R 75 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETK 75 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34566899999999999999999999999999999994 3577899999997765544
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.02 E-value=2.6e-10 Score=97.41 Aligned_cols=54 Identities=26% Similarity=0.297 Sum_probs=48.2
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh--------hHHHHHHHHHHHHhhHHhhh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHKP--------SIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~--------~~~~IEaAYD~Ilm~~L~~R 144 (282)
+|+|++|||+++||.+||++||++|..+||||.. ++.+|++||+.+.....|+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~ 63 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 6899999999999999999999999999999953 57889999999887766554
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.97 E-value=1.4e-10 Score=94.40 Aligned_cols=56 Identities=14% Similarity=0.117 Sum_probs=50.1
Q ss_pred CCCChhhhhCCCCCCCH--HHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhhHHhhh
Q 023452 89 NVRDPYKRLGISREASE--EEIQAARNFLVQKYAGHK----PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 89 ~~~dPYe~LGVs~~AS~--eEI~~A~~rL~~~y~~D~----~~~~~IEaAYD~Ilm~~L~~R 144 (282)
+..|+|++|||+++|+. +|||+||++|.++||||+ +++.+|+.||+.|.....|++
T Consensus 6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHH
Confidence 34689999999999999 999999999999999985 579999999999888776666
No 24
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=98.93 E-value=3.9e-10 Score=88.94 Aligned_cols=48 Identities=13% Similarity=0.130 Sum_probs=42.8
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh-----------hHHHHHHHHHHHHh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHKP-----------SIDAIESAHDKIIM 138 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~-----------~~~~IEaAYD~Ilm 138 (282)
.+.|++|||+++||.+|||+|||++..+||||+. ++.+|+.|||.+..
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999842 47789999998753
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.91 E-value=1.3e-10 Score=109.33 Aligned_cols=56 Identities=18% Similarity=0.270 Sum_probs=0.0
Q ss_pred CCCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-------hhHHHHHHHHHHHHhhHHh
Q 023452 87 RINVRDPYKRLGISREASEEEIQAARNFLVQKYAGHK-------PSIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 87 r~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~ 142 (282)
.|+.+|+|++|||+++||.+|||+||++|..+||||. +++.+|++|||.|.....|
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R 86 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRR 86 (329)
T ss_dssp ---------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhh
Confidence 3566899999999999999999999999999999994 4688999999998765444
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=98.89 E-value=2.5e-10 Score=99.39 Aligned_cols=57 Identities=14% Similarity=0.088 Sum_probs=49.3
Q ss_pred CCCCChhhhhCCCCCCC--HHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhhHHhhh
Q 023452 88 INVRDPYKRLGISREAS--EEEIQAARNFLVQKYAGHK----PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 88 ~~~~dPYe~LGVs~~AS--~eEI~~A~~rL~~~y~~D~----~~~~~IEaAYD~Ilm~~L~~R 144 (282)
.+..|+|++|||+++|+ .+|||+||+++..+||||. +++.+|++|||.+.....|++
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~ 70 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 70 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHT
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 34579999999999999 6999999999999999994 568899999999887766555
No 27
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.83 E-value=4.3e-09 Score=90.74 Aligned_cols=55 Identities=7% Similarity=0.079 Sum_probs=47.1
Q ss_pred CCChhhhhCCCCCCC--HHHHHHHHHHHHHHhCCCh-------------hhHHHHHHHHHHHHhhHHhhh
Q 023452 90 VRDPYKRLGISREAS--EEEIQAARNFLVQKYAGHK-------------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 90 ~~dPYe~LGVs~~AS--~eEI~~A~~rL~~~y~~D~-------------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
..|||++|||+++++ .+||++||++|..+||||. ..+..|+.||+.+.....|..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~ 72 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAE 72 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 468999999999998 9999999999999999995 246789999999877655443
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.77 E-value=3.4e-09 Score=92.91 Aligned_cols=52 Identities=13% Similarity=0.111 Sum_probs=46.1
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh-----------hHHHHHHHHHHHHhhHHh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHKP-----------SIDAIESAHDKIIMQKFY 142 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~-----------~~~~IEaAYD~Ilm~~L~ 142 (282)
.|+|++|||+++|+.+|||+||+++..+||||+. ++.+|+.||+.+.....|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR 179 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhh
Confidence 6899999999999999999999999999999952 577899999998765443
No 29
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.72 E-value=5.2e-09 Score=83.96 Aligned_cols=47 Identities=6% Similarity=-0.043 Sum_probs=41.5
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh---------------hhHHHHHHHHHHHHh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHK---------------PSIDAIESAHDKIIM 138 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~---------------~~~~~IEaAYD~Ilm 138 (282)
.|+|++||++. ||.+|||+|||++..+||||+ +++.+|+.||+.+..
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd 102 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcC
Confidence 68999999996 999999999999999999985 246789999999754
No 30
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.71 E-value=1.2e-08 Score=87.73 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=45.7
Q ss_pred ChhhhhCCCCCC--CHHHHHHHHHHHHHHhCCChh-------------hHHHHHHHHHHHHhhHHhh
Q 023452 92 DPYKRLGISREA--SEEEIQAARNFLVQKYAGHKP-------------SIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 92 dPYe~LGVs~~A--S~eEI~~A~~rL~~~y~~D~~-------------~~~~IEaAYD~Ilm~~L~~ 143 (282)
|+|++|||++++ |.+||++||++|..+||||.. ++.+|+.||+.+.....|.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 68 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 799999999999 999999999999999999952 4778999999987655543
No 31
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.71 E-value=2.7e-08 Score=88.18 Aligned_cols=54 Identities=11% Similarity=0.064 Sum_probs=45.9
Q ss_pred CCChhhhhCCCCC--CCHHHHHHHHHHHHHHhCCChh-------------hHHHHHHHHHHHHhhHHhh
Q 023452 90 VRDPYKRLGISRE--ASEEEIQAARNFLVQKYAGHKP-------------SIDAIESAHDKIIMQKFYE 143 (282)
Q Consensus 90 ~~dPYe~LGVs~~--AS~eEI~~A~~rL~~~y~~D~~-------------~~~~IEaAYD~Ilm~~L~~ 143 (282)
..|+|++|||+++ ++.+||++||++|..+||||.. ++.+|+.||+.+.....|.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4689999999997 7999999999999999999952 2478999999987655543
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.5e-08 Score=75.28 Aligned_cols=51 Identities=16% Similarity=0.212 Sum_probs=44.8
Q ss_pred CCCChhhhhCCCCC---CCHHHHHHHHHHHHHHhCCCh----hhHHHHHHHHHHHHhh
Q 023452 89 NVRDPYKRLGISRE---ASEEEIQAARNFLVQKYAGHK----PSIDAIESAHDKIIMQ 139 (282)
Q Consensus 89 ~~~dPYe~LGVs~~---AS~eEI~~A~~rL~~~y~~D~----~~~~~IEaAYD~Ilm~ 139 (282)
+.++.|++|||+++ ++.|||+++|++|..++|||+ ....+|+.|+|.+..+
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45678999999999 999999999999999999985 3478899999997654
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.57 E-value=1.3e-08 Score=102.45 Aligned_cols=57 Identities=25% Similarity=0.258 Sum_probs=34.2
Q ss_pred CCCCChhhhhCCCCCCCHHHHHHHHHHHHHHhCCChh--------hHHHHHHHHHHHHhhHHhhh
Q 023452 88 INVRDPYKRLGISREASEEEIQAARNFLVQKYAGHKP--------SIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 88 ~~~~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~~--------~~~~IEaAYD~Ilm~~L~~R 144 (282)
....|||++|||+++||.+|||+||++|.++||||.. ++.+|++||+.+.....|++
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~ 82 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 82 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHH
Confidence 3558999999999999999999999999999999963 57789999999888766654
No 34
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.49 E-value=1.1e-07 Score=82.74 Aligned_cols=59 Identities=7% Similarity=-0.003 Sum_probs=48.8
Q ss_pred CCCCCCChhhhh------CCCC-CCCHHHHHHHHHHHHHHhCCCh-----hhHHHHHHHHHHHHhhHHhhh
Q 023452 86 PRINVRDPYKRL------GISR-EASEEEIQAARNFLVQKYAGHK-----PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 86 pr~~~~dPYe~L------GVs~-~AS~eEI~~A~~rL~~~y~~D~-----~~~~~IEaAYD~Ilm~~L~~R 144 (282)
++....|+|++| |+.+ +||.+||++||++|..+||||. +++.+|+.||+.+.....|..
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~ 76 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQ 76 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHH
Confidence 455668999999 4655 9999999999999999999996 468899999999877655543
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.90 E-value=0.00052 Score=61.19 Aligned_cols=54 Identities=26% Similarity=0.358 Sum_probs=44.3
Q ss_pred CChhhhhCCCCCCCHHHHHHHHHHHHHHhCCCh-----------hhHHHHHHHHHHHHhhHHhhh
Q 023452 91 RDPYKRLGISREASEEEIQAARNFLVQKYAGHK-----------PSIDAIESAHDKIIMQKFYER 144 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~eEI~~A~~rL~~~y~~D~-----------~~~~~IEaAYD~Ilm~~L~~R 144 (282)
.|-|+.||+.++++.+||+++|+++..++|||. +++.+|.+||+.+.....+.|
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~ 446 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKK 446 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC--
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHh
Confidence 478999999999999999999999999999873 257789999999766554443
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=84.35 E-value=0.48 Score=46.91 Aligned_cols=44 Identities=11% Similarity=0.121 Sum_probs=35.7
Q ss_pred CChhhhhCCCCCCCH--HHHHHHHHHHHHHhCCChhhHHHHHHHHH
Q 023452 91 RDPYKRLGISREASE--EEIQAARNFLVQKYAGHKPSIDAIESAHD 134 (282)
Q Consensus 91 ~dPYe~LGVs~~AS~--eEI~~A~~rL~~~y~~D~~~~~~IEaAYD 134 (282)
.|+|++||++-++.. .+|++||+++.++..+++.+.+-|+.|+.
T Consensus 629 ~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~~~r~~lvd~a~~ 674 (681)
T 2pzi_A 629 ASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQRHRYTLVDMANK 674 (681)
T ss_dssp CSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCChHHHHHHHHHHHHHHHHhCCChHHHHHHHHHhcc
Confidence 358999999877777 78999999999986666666777888774
No 37
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=30.35 E-value=44 Score=32.55 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHhhHHhhhhCCC
Q 023452 103 ASEEEIQAARNFLVQKYAGHKPSIDAIESAHDKIIMQKFYERRNPK 148 (282)
Q Consensus 103 AS~eEI~~A~~rL~~~y~~D~~~~~~IEaAYD~Ilm~~L~~R~~Gk 148 (282)
.|.|||++|++.+ |++..+.|+.||+.| .++.++|+.+
T Consensus 74 vs~~ei~~A~~~l------~~~~~~ai~~A~~~I--~~fh~~Q~~~ 111 (423)
T 4gic_A 74 LPRDVLEAAWQAL------PAEQAKALREAAERI--RAYAERQKLD 111 (423)
T ss_dssp ECHHHHHHHHHTS------CHHHHHHHHHHHHHH--HHHHHHHCCC
T ss_pred cCHHHHHHHHhhC------CHHHHHHHHHHHHHH--HHHHHhcccC
Confidence 4789999998765 677888999999998 4566666643
No 38
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=28.02 E-value=61 Score=31.68 Aligned_cols=38 Identities=29% Similarity=0.274 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHhhHHhhhhCCC
Q 023452 103 ASEEEIQAARNFLVQKYAGHKPSIDAIESAHDKIIMQKFYERRNPK 148 (282)
Q Consensus 103 AS~eEI~~A~~rL~~~y~~D~~~~~~IEaAYD~Ilm~~L~~R~~Gk 148 (282)
-|.|||++||+++ |++..+.|+.|++.| .++.++|+.+
T Consensus 68 Vs~~ei~~A~~~~------~~~~~~ai~~A~~nI--~~fH~~Q~~~ 105 (434)
T 1kae_A 68 VSAEEIAAASERL------SDELKQAMAVAVKNI--ETFHTAQKLP 105 (434)
T ss_dssp CCHHHHHHHHHHS------CHHHHHHHHHHHHHH--HHHHHTTCCC
T ss_pred cCHHHHHHHHHhC------CHHHHHHHHHHHHHH--HHHHHHhcCC
Confidence 4789999999876 777899999999998 4566666554
No 39
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=23.18 E-value=74 Score=25.79 Aligned_cols=13 Identities=0% Similarity=0.207 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHh
Q 023452 126 IDAIESAHDKIIM 138 (282)
Q Consensus 126 ~~~IEaAYD~Ilm 138 (282)
++++-.=||..+.
T Consensus 70 ~ae~k~KYD~~lq 82 (115)
T 3vem_A 70 MAEVQAEFRRKFH 82 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4445555555444
Done!