Query 023456
Match_columns 282
No_of_seqs 132 out of 741
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 04:10:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023456.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023456hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1387 Glycosyltransferase [C 100.0 2.2E-63 4.7E-68 461.1 22.0 231 31-272 40-276 (465)
2 PLN02949 transferase, transfer 100.0 4.4E-56 9.5E-61 436.1 26.8 250 23-272 22-275 (463)
3 cd03806 GT1_ALG11_like This fa 100.0 5.1E-47 1.1E-51 366.7 23.3 237 36-272 2-244 (419)
4 cd03804 GT1_wbaZ_like This fam 99.7 3.4E-16 7.4E-21 145.7 16.0 197 36-271 1-201 (351)
5 cd03805 GT1_ALG2_like This fam 99.6 1.2E-14 2.5E-19 136.7 17.4 192 35-262 1-197 (392)
6 PF13439 Glyco_transf_4: Glyco 99.4 1.3E-12 2.8E-17 107.9 8.8 176 37-259 1-177 (177)
7 KOG0853 Glycosyltransferase [C 99.4 5.7E-13 1.2E-17 131.1 5.3 191 33-259 33-249 (495)
8 cd03818 GT1_ExpC_like This fam 98.7 5.1E-07 1.1E-11 86.2 15.6 190 36-263 1-196 (396)
9 cd03809 GT1_mtfB_like This fam 98.6 7.6E-07 1.6E-11 81.2 12.8 178 36-261 1-181 (365)
10 cd04955 GT1_like_6 This family 98.6 1.7E-06 3.6E-11 79.7 14.3 176 36-260 1-180 (363)
11 cd03820 GT1_amsD_like This fam 98.4 8.5E-06 1.8E-10 72.7 14.5 180 36-271 1-184 (348)
12 cd03811 GT1_WabH_like This fam 98.4 4.3E-06 9.4E-11 74.6 11.4 173 36-262 1-177 (353)
13 cd03801 GT1_YqgM_like This fam 98.3 1.4E-05 2.9E-10 71.4 13.7 180 36-260 1-184 (374)
14 cd04962 GT1_like_5 This family 98.3 5.8E-06 1.2E-10 76.8 11.6 176 35-261 1-182 (371)
15 PLN02871 UDP-sulfoquinovose:DA 98.3 2.1E-05 4.6E-10 77.1 14.5 185 32-261 56-246 (465)
16 cd03802 GT1_AviGT4_like This f 98.1 0.0001 2.2E-09 67.1 15.3 172 35-271 1-177 (335)
17 cd03819 GT1_WavL_like This fam 98.1 5.8E-05 1.3E-09 69.3 13.4 161 40-262 3-166 (355)
18 PRK10307 putative glycosyl tra 98.1 8.9E-05 1.9E-09 71.0 15.1 202 35-261 1-211 (412)
19 cd03823 GT1_ExpE7_like This fa 98.1 5.8E-05 1.3E-09 68.3 12.3 176 36-262 1-184 (359)
20 PF13579 Glyco_trans_4_4: Glyc 98.1 3.8E-06 8.1E-11 67.9 3.8 152 48-250 1-158 (160)
21 PRK09922 UDP-D-galactose:(gluc 98.0 4.3E-05 9.3E-10 72.1 11.4 166 35-259 1-171 (359)
22 cd03822 GT1_ecORF704_like This 98.0 8.4E-05 1.8E-09 67.7 13.0 163 36-261 1-173 (366)
23 cd03795 GT1_like_4 This family 98.0 0.00011 2.5E-09 67.2 13.7 174 37-262 2-178 (357)
24 cd03807 GT1_WbnK_like This fam 98.0 0.00013 2.9E-09 65.6 13.5 173 36-262 1-177 (365)
25 cd03812 GT1_CapH_like This fam 98.0 0.0001 2.2E-09 67.8 12.3 174 36-262 1-177 (358)
26 cd03798 GT1_wlbH_like This fam 98.0 0.00024 5.2E-09 63.7 14.5 172 47-262 13-189 (377)
27 cd03817 GT1_UGDG_like This fam 98.0 0.00016 3.4E-09 65.5 13.2 183 36-262 1-188 (374)
28 cd03796 GT1_PIG-A_like This fa 97.9 0.00021 4.5E-09 68.4 13.6 180 37-263 2-187 (398)
29 cd03821 GT1_Bme6_like This fam 97.9 0.00024 5.2E-09 64.2 13.0 184 36-262 1-189 (375)
30 cd03814 GT1_like_2 This family 97.9 8.9E-05 1.9E-09 67.3 9.7 179 36-262 1-183 (364)
31 PRK15179 Vi polysaccharide bio 97.8 0.0011 2.4E-08 68.9 18.3 40 221-260 458-498 (694)
32 cd03794 GT1_wbuB_like This fam 97.8 0.00036 7.7E-09 63.2 12.7 199 36-262 1-206 (394)
33 cd03825 GT1_wcfI_like This fam 97.8 0.00046 9.9E-09 63.4 12.7 43 219-261 133-176 (365)
34 cd03808 GT1_cap1E_like This fa 97.7 0.0015 3.3E-08 58.4 15.3 176 36-262 1-181 (359)
35 cd03799 GT1_amsK_like This is 97.7 0.00063 1.4E-08 62.2 12.4 165 36-262 1-172 (355)
36 TIGR03088 stp2 sugar transfera 97.7 0.00092 2E-08 62.7 13.6 176 34-262 1-178 (374)
37 PRK10125 putative glycosyl tra 97.7 0.0024 5.2E-08 62.1 16.5 37 220-257 189-225 (405)
38 cd03800 GT1_Sucrose_synthase T 97.6 0.00099 2.2E-08 62.1 12.9 49 214-262 156-205 (398)
39 TIGR03449 mycothiol_MshA UDP-N 97.6 0.00082 1.8E-08 63.8 12.0 47 215-261 157-204 (405)
40 cd04951 GT1_WbdM_like This fam 97.6 0.0015 3.2E-08 59.9 13.2 167 36-261 1-171 (360)
41 TIGR02149 glgA_Coryne glycogen 97.4 0.0029 6.2E-08 59.4 13.1 179 35-261 1-186 (388)
42 PRK00726 murG undecaprenyldiph 97.2 0.0041 8.8E-08 58.3 11.2 158 46-260 10-170 (357)
43 cd03785 GT1_MurG MurG is an N- 97.2 0.0055 1.2E-07 56.8 11.8 159 45-260 7-168 (350)
44 cd05844 GT1_like_7 Glycosyltra 97.1 0.007 1.5E-07 56.0 11.4 102 136-261 78-182 (367)
45 cd03816 GT1_ALG1_like This fam 97.0 0.018 4E-07 55.7 13.9 42 209-251 148-190 (415)
46 cd03792 GT1_Trehalose_phosphor 96.5 0.05 1.1E-06 51.3 12.8 38 36-76 1-38 (372)
47 TIGR02472 sucr_P_syn_N sucrose 96.3 0.11 2.4E-06 50.6 14.1 190 47-261 25-226 (439)
48 PLN02275 transferase, transfer 96.2 0.19 4.1E-06 47.8 14.8 50 209-261 153-202 (371)
49 TIGR01133 murG undecaprenyldip 95.9 0.11 2.3E-06 48.2 11.2 30 45-76 8-37 (348)
50 PF09314 DUF1972: Domain of un 95.8 0.42 9.2E-06 42.0 14.1 161 36-241 3-173 (185)
51 cd03791 GT1_Glycogen_synthase_ 95.2 0.83 1.8E-05 44.5 15.4 47 216-262 205-261 (476)
52 TIGR03087 stp1 sugar transfera 95.2 0.36 7.9E-06 46.0 12.6 53 210-262 161-214 (397)
53 cd04949 GT1_gtfA_like This fam 94.8 0.25 5.5E-06 46.1 10.1 99 139-261 98-197 (372)
54 PRK15490 Vi polysaccharide bio 94.6 1.2 2.6E-05 45.7 14.9 42 219-261 337-379 (578)
55 cd01635 Glycosyltransferase_GT 93.6 0.3 6.6E-06 40.9 7.3 36 37-74 1-37 (229)
56 PRK00654 glgA glycogen synthas 92.1 6.6 0.00014 38.6 15.4 41 35-78 1-45 (466)
57 PF12038 DUF3524: Domain of un 92.0 1.3 2.7E-05 38.5 8.8 34 35-75 1-34 (168)
58 PRK15484 lipopolysaccharide 1, 91.3 2.2 4.7E-05 40.8 10.7 40 221-261 139-178 (380)
59 PRK15427 colanic acid biosynth 90.9 4.3 9.4E-05 39.3 12.6 39 35-77 1-39 (406)
60 TIGR02095 glgA glycogen/starch 89.3 15 0.00032 36.1 15.0 41 35-78 1-45 (473)
61 PRK13609 diacylglycerol glucos 88.8 1.8 4E-05 40.8 8.0 35 219-254 145-180 (380)
62 PRK05749 3-deoxy-D-manno-octul 88.4 13 0.00028 35.8 13.7 43 213-257 170-212 (425)
63 PF12000 Glyco_trans_4_3: Gkyc 85.0 4.9 0.00011 34.9 7.8 102 139-258 65-170 (171)
64 PHA01630 putative group 1 glyc 84.9 1.9 4E-05 40.9 5.6 44 219-262 92-136 (331)
65 PF13528 Glyco_trans_1_3: Glyc 84.7 7.8 0.00017 35.4 9.5 123 35-172 1-125 (318)
66 PF08660 Alg14: Oligosaccharid 83.2 8.7 0.00019 33.1 8.6 37 120-157 72-108 (170)
67 PRK10017 colanic acid biosynth 82.6 17 0.00036 36.0 11.3 44 35-78 1-44 (426)
68 TIGR02468 sucrsPsyn_pln sucros 81.2 32 0.00069 38.0 13.6 48 214-261 374-444 (1050)
69 cd03813 GT1_like_3 This family 80.2 2.5 5.5E-05 41.7 4.7 60 202-262 225-285 (475)
70 TIGR00215 lpxB lipid-A-disacch 79.5 6.2 0.00013 38.0 7.0 92 122-253 71-167 (385)
71 TIGR02470 sucr_synth sucrose s 78.1 63 0.0014 34.6 14.5 48 215-262 446-515 (784)
72 PLN02316 synthase/transferase 77.5 1.2E+02 0.0027 33.6 18.2 182 33-261 586-804 (1036)
73 PHA01633 putative glycosyl tra 73.7 4.8 0.0001 38.5 4.5 40 221-262 92-131 (335)
74 KOG2941 Beta-1,4-mannosyltrans 73.1 15 0.00033 35.8 7.5 184 28-252 7-201 (444)
75 cd04950 GT1_like_1 Glycosyltra 72.3 16 0.00035 34.6 7.7 46 213-261 145-190 (373)
76 cd04946 GT1_AmsK_like This fam 66.7 17 0.00036 35.1 6.6 44 218-261 180-224 (407)
77 cd03793 GT1_Glycogen_synthase_ 65.4 9.6 0.00021 39.3 4.8 51 212-264 217-268 (590)
78 COG1519 KdtA 3-deoxy-D-manno-o 64.9 53 0.0011 32.6 9.6 41 49-94 60-100 (419)
79 TIGR03492 conserved hypothetic 63.9 21 0.00044 34.7 6.6 91 125-238 76-177 (396)
80 PLN02846 digalactosyldiacylgly 62.5 1.7E+02 0.0036 29.4 12.9 43 32-76 2-46 (462)
81 TIGR02918 accessory Sec system 59.7 1.1E+02 0.0023 30.9 11.0 86 133-241 204-290 (500)
82 PRK13608 diacylglycerol glucos 58.9 47 0.001 31.8 8.1 36 219-255 145-181 (391)
83 PF13477 Glyco_trans_4_2: Glyc 55.9 97 0.0021 24.2 10.5 25 51-77 10-34 (139)
84 PRK14099 glycogen synthase; Pr 50.9 2.7E+02 0.0058 27.8 15.0 46 217-262 205-260 (485)
85 PF03808 Glyco_tran_WecB: Glyc 48.6 26 0.00056 29.9 4.1 35 31-72 45-79 (172)
86 PF00448 SRP54: SRP54-type pro 46.7 87 0.0019 27.4 7.2 21 34-54 29-49 (196)
87 TIGR00696 wecB_tagA_cpsF bacte 46.0 30 0.00066 30.0 4.1 35 32-73 46-80 (177)
88 PF04007 DUF354: Protein of un 41.5 1.4E+02 0.003 28.7 8.1 97 53-172 15-114 (335)
89 PRK12446 undecaprenyldiphospho 41.5 1.2E+02 0.0025 28.9 7.7 27 128-155 79-105 (352)
90 TIGR02201 heptsyl_trn_III lipo 38.3 1E+02 0.0023 28.6 6.8 22 55-76 17-38 (344)
91 COG0707 MurG UDP-N-acetylgluco 37.4 1.9E+02 0.0041 27.9 8.5 45 128-173 79-124 (357)
92 PRK01021 lpxB lipid-A-disaccha 35.9 67 0.0014 33.4 5.3 44 126-172 296-346 (608)
93 TIGR03472 HpnI hopanoid biosyn 35.4 2.5E+02 0.0054 26.7 9.0 35 34-72 40-75 (373)
94 PRK14716 bacteriophage N4 adso 34.0 1.8E+02 0.0039 29.5 8.0 38 33-74 64-103 (504)
95 PRK00025 lpxB lipid-A-disaccha 30.3 98 0.0021 28.9 5.2 30 221-253 134-163 (380)
96 PF02504 FA_synthesis: Fatty a 28.2 2.8E+02 0.006 26.6 7.8 24 127-151 81-104 (323)
97 COG1922 WecG Teichoic acid bio 28.2 97 0.0021 28.7 4.5 32 34-72 108-139 (253)
98 cd03789 GT1_LPS_heptosyltransf 27.5 3.4E+02 0.0073 24.3 8.0 89 36-150 1-89 (279)
99 COG4671 Predicted glycosyl tra 26.2 5.4E+02 0.012 25.4 9.3 43 33-77 8-51 (400)
100 cd06533 Glyco_transf_WecG_TagA 24.1 81 0.0017 26.9 3.1 35 31-72 43-77 (171)
101 PF14654 Epiglycanin_C: Mucin, 23.8 1.5E+02 0.0033 23.6 4.2 37 7-43 20-60 (106)
102 COG3399 Uncharacterized protei 23.5 1E+02 0.0022 25.7 3.3 43 2-44 85-129 (148)
103 PF06522 B12D: NADH-ubiquinone 21.3 1.7E+02 0.0036 21.6 3.9 38 111-149 2-40 (73)
104 PRK10422 lipopolysaccharide co 20.3 3.3E+02 0.0071 25.5 6.7 42 32-76 3-44 (352)
105 TIGR02195 heptsyl_trn_II lipop 20.3 3.1E+02 0.0068 25.2 6.5 37 37-76 2-38 (334)
No 1
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=2.2e-63 Score=461.07 Aligned_cols=231 Identities=38% Similarity=0.724 Sum_probs=212.9
Q ss_pred CCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCC-eEEEccccc
Q 023456 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP-KVVHLYRRK 109 (282)
Q Consensus 31 ~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~-~fv~l~~~~ 109 (282)
++...+|||||||||+|||||||||+|++++|+.||++..+|||++.+.++++|+++++..|++++++.. +||+|+.|.
T Consensus 40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~ 119 (465)
T KOG1387|consen 40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRY 119 (465)
T ss_pred hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence 3445689999999999999999999999999999999999999999999999999999999999998764 999999999
Q ss_pred eeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhccccc
Q 023456 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMY 188 (282)
Q Consensus 110 ~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~ 188 (282)
|+++++|++||+++|++|+|.+|+||+.+++||+||||+|+||++|+++. .+.|+++|+|||+||+|||.++.+|+-
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~-- 197 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK-- 197 (465)
T ss_pred eeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh--
Confidence 99999999999999999999999999999999999999999999999984 999999999999999999999987532
Q ss_pred ccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCCC----
Q 023456 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPF---- 264 (282)
Q Consensus 189 ~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~~---- 264 (282)
++++++.|..|||+|+.+|.++|+.+|.+|+||+||++||+++|++ ++..+|||||||+..++....
T Consensus 198 --------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~te~~r 268 (465)
T KOG1387|consen 198 --------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGTEGER 268 (465)
T ss_pred --------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcccCCc
Confidence 3478899999999999999999999999999999999999999995 678999999999977665433
Q ss_pred CcceEEEe
Q 023456 265 FSQIISMD 272 (282)
Q Consensus 265 ~~~~~s~~ 272 (282)
+.+++|++
T Consensus 269 ~~~ll~l~ 276 (465)
T KOG1387|consen 269 ENQLLSLA 276 (465)
T ss_pred ceEEEEEe
Confidence 46688875
No 2
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.4e-56 Score=436.10 Aligned_cols=250 Identities=79% Similarity=1.359 Sum_probs=228.1
Q ss_pred HHhhhhccCCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeE
Q 023456 23 ASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (282)
Q Consensus 23 ~~~~~~~~~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~f 102 (282)
+...+|-+..++.+|||+||+||+|||||||+|+|+.+||+..++++|+|||+++|.++++++++++++|+++++.+++|
T Consensus 22 ~~~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~ 101 (463)
T PLN02949 22 ALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKV 101 (463)
T ss_pred HHHHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceE
Confidence 33447888888999999999999999999999999999999988889999999999888999998999999999888899
Q ss_pred EEccccceeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCCchhhhhhhhh
Q 023456 103 VHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVR 182 (282)
Q Consensus 103 v~l~~~~~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~is~dml~~v~ 182 (282)
|++++++|++++.||+||+++|++|++.+++|++.+..||+|+||+|++|++|++++.++|+++|||||++|+||+.+++
T Consensus 102 v~l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~ 181 (463)
T PLN02949 102 VHLRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVR 181 (463)
T ss_pred EEeccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHh
Confidence 99988999999999999999999999999999998778899999999999999999889999999999999999999999
Q ss_pred hcccccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
+++..|||+++++++...+.+|.+|+++++++|+++++.+|.+++||+||++++++.|+.+.+.+|+|||||++.+...+
T Consensus 182 ~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~ 261 (463)
T PLN02949 182 DRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALP 261 (463)
T ss_pred hcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCC
Confidence 99999999999999988899999999999999999999999999999999999999998544678999999987764333
Q ss_pred CC----CcceEEEe
Q 023456 263 PF----FSQIISMD 272 (282)
Q Consensus 263 ~~----~~~~~s~~ 272 (282)
.. +..+++++
T Consensus 262 ~~~~~~~~~il~vG 275 (463)
T PLN02949 262 LERSEDPPYIISVA 275 (463)
T ss_pred ccccCCCCEEEEEE
Confidence 21 23477765
No 3
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=5.1e-47 Score=366.69 Aligned_cols=237 Identities=51% Similarity=0.904 Sum_probs=215.5
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEcc-ccceeecc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~-~~~~l~~~ 114 (282)
.|||+|||||+|||||||+|+|+++||+..|+++|+|||++++.+.+++++++++.|++++.+.+.++++. .+.|++++
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 69999999999999999999999999999999999999999987667888899999999998888777763 67899999
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhcccccccchh
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~ 193 (282)
.|+|||+++|+++++.++++++....|||||||+|++++.|+++. +++|+++|||||++|+||+.+++.++..|||+.+
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~ 161 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSAT 161 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccc
Confidence 999999999999999999999876789999999999999999886 8999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCC----CCcceE
Q 023456 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNP----FFSQII 269 (282)
Q Consensus 194 i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~----~~~~~~ 269 (282)
+++++.++.+|.+||++|++++++..+.+|.+++||+||++++++.|+...+..|+|||||++.|.+.+. .+..|+
T Consensus 162 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~il 241 (419)
T cd03806 162 IARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQIL 241 (419)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEEE
Confidence 9999888899999999999999999999999999999999999999983337899999999988865542 134577
Q ss_pred EEe
Q 023456 270 SMD 272 (282)
Q Consensus 270 s~~ 272 (282)
+++
T Consensus 242 ~vg 244 (419)
T cd03806 242 SIA 244 (419)
T ss_pred EEE
Confidence 775
No 4
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.70 E-value=3.4e-16 Score=145.71 Aligned_cols=197 Identities=20% Similarity=0.189 Sum_probs=118.1
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhH-HH--hhccccceeecCCCeEEEccccceee
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL-LA--RAVDRFGVELLHPPKVVHLYRRKWIE 112 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i-~~--~v~~~f~~~l~~~~~fv~l~~~~~l~ 112 (282)
||||+||++...||||||+. +|.+.+++++ ++|...+...... .. .++..+...++.
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~----~l~~~l~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 60 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVE----ALARLFPDAD--IFTLVDDPDKLPRLLRLKKIRTSFIQKLPF-------------- 60 (351)
T ss_pred CEEEEEeccccCCCHHHHHH----HHHHhCCCCC--EEEEeecCCccchhhcCCceeechhhhchh--------------
Confidence 69999999999999999995 4555555555 5554433221111 00 111111111110
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 113 ~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
..+.+...+..++.+++.+...++|+++.++ ...+..+.+..+.+++.|||.|. +.+|+....|
T Consensus 61 -----~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~-~~~~~~~~~~~~~~~~~~~h~~~------~~~~~~~~~~---- 124 (351)
T cd03804 61 -----ARRRYRKYLPLMPLAIEQFDLSGYDLVISSS-HAVAKGVITRPDQLHICYCHTPM------RYAWDLYHDY---- 124 (351)
T ss_pred -----hHhhHhhhCchhhHHHHhccccCCCEEEEcC-cHHhccccCCCCCcEEEEeCCch------HHHhcCchHh----
Confidence 0011111223455566777778899888874 34444554457899999999997 3444422222
Q ss_pred hhhccchhh-HHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCCCCcceEEE
Q 023456 193 SIAQSNWLS-QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISM 271 (282)
Q Consensus 193 ~i~~~~~~s-~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~~~~~~~s~ 271 (282)
....+... .......+.+..++....+++|.++++|..+++.+++.++ .+..|+|||+|++.|.+.+..+..++.+
T Consensus 125 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~~~~~~~il~~ 201 (351)
T cd03804 125 -LKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPAEEKEDYYLSV 201 (351)
T ss_pred -hhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcCCCCCCEEEEE
Confidence 22211111 1112233344555666788999999999999999999999 7889999999999887665333334443
No 5
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.63 E-value=1.2e-14 Score=136.74 Aligned_cols=192 Identities=26% Similarity=0.431 Sum_probs=125.0
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
|+|+|+||+++ .||+||++.+.+++|.+. |++|.++|...+ +....++..+. +..+ .. .+.|+++.
T Consensus 1 mkIl~~~~~~~-~gG~e~~~~~la~~L~~~--G~~V~v~~~~~~--~~~~~~~~~~~-~~~i-------~~-~~~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDLG-IGGAERLVVDAALALQSR--GHEVTIYTSHHD--PSHCFEETKDG-TLPV-------RV-RGDWLPRS 66 (392)
T ss_pred CeEEEECCCCC-CchHHHHHHHHHHHHHhC--CCeEEEEcCCCC--chhcchhccCC-eeEE-------EE-EeEEEcch
Confidence 68999999997 699999999999999998 999999997532 11111111110 0111 00 02234444
Q ss_pred cCCchhhhhHHHHHHHHHHHH--HhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhcccccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEA--LCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~ea--l~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~ 191 (282)
.+.++..+.+.+..+..++.. ....++|+++... .....++++. .+.+++.|+|+|.. ..+ .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~-~~~~~~~~~~~~~~~~i~~~h~~~~-------~~~------~- 131 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQ-VSACVPLLKLFSPSKILFYCHFPDQ-------LLA------Q- 131 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcC-cchHHHHHHHhcCCcEEEEEecChH-------Hhc------C-
Confidence 444555555544444333322 3456799665432 2223444444 34899999999971 111 0
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCC-ceEEcCCCCCCcccCCC
Q 023456 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDR-IKRVYPPCDTSGLQACN 262 (282)
Q Consensus 192 ~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~-~~VvYPPVd~~~f~~~~ 262 (282)
+ .+..+.+|+.++.+++.+..+.+|.++++|.++++.+++.++. +.+ ..|+||++|.+.|.+.+
T Consensus 132 -----~--~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~ 197 (392)
T cd03805 132 -----R--GSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTS 197 (392)
T ss_pred -----C--CcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccc
Confidence 1 2245667778888999999999999999999999999998863 222 34999999998886543
No 6
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.39 E-value=1.3e-12 Score=107.91 Aligned_cols=176 Identities=18% Similarity=0.147 Sum_probs=92.0
Q ss_pred EEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccC
Q 023456 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (282)
Q Consensus 37 VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~ 116 (282)
|.++|.++...||+|+++.+.+++|.+. |++|.+++...+.. .... ...... ... +
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~--G~~v~v~~~~~~~~---~~~~----~~~~~~------~~~---------~ 56 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKR--GHEVTVVSPGVKDP---IEEE----LVKIFV------KIP---------Y 56 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHT--T-EEEEEESS-TTS----SST----EEEE---------TT----------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHC--CCEEEEEEcCCCcc---chhh----ccceee------eee---------c
Confidence 5688889999999999999999999999 99999998764311 1001 000000 000 0
Q ss_pred CchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhc
Q 023456 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (282)
Q Consensus 117 p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~ 196 (282)
+......+.+..+....+.+.+.+||++--....++........+.|.+..+|.+.....+... ..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~~~~~--------------~~ 122 (177)
T PF13439_consen 57 PIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERRFLKS--------------KL 122 (177)
T ss_dssp SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HHTTTT--------------SC
T ss_pred ccccccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCccccccccc--------------cc
Confidence 0011112222233334445666689988332212211111111388999999998632111100 00
Q ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccc
Q 023456 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ 259 (282)
Q Consensus 197 ~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~ 259 (282)
+ .+.......+....+.+|.+++||+++++.+++ ++. +.+..|+|++||++.|+
T Consensus 123 ~--------~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 123 S--------PYSYLNFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp C--------CHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred c--------hhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 1 111222222334467899999999999999999 885 45689999999999874
No 7
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.36 E-value=5.7e-13 Score=131.08 Aligned_cols=191 Identities=20% Similarity=0.242 Sum_probs=130.3
Q ss_pred CCcEEEEEccCCCCCCchhHHHHHHHHHHHH---------hCCCCcEEEEcCcCCCChh----hHHHhhccc-cceeecC
Q 023456 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQE---------ESPDLDCIVYTGDHDAFPD----SLLARAVDR-FGVELLH 98 (282)
Q Consensus 33 ~~~~VafvHp~l~~~GGgErVl~~a~~aL~~---------~~p~~~v~IYT~~~~~~~~----~i~~~v~~~-f~~~l~~ 98 (282)
....+.|.||+++ +||+||...+++.+++. . |.+|+++|.+.+.... +|++...+. ..+..
T Consensus 33 ~~~~~~~~~~~~~-~gg~er~~v~~~~~l~s~~~~lg~~d~--G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~v-- 107 (495)
T KOG0853|consen 33 PFEHVTFIHPDLG-IGGAERLVVDAAVHLLSGQDVLGLPDT--GGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILV-- 107 (495)
T ss_pred cchhheeeccccc-cCchHHHhHHHHHHHHhcccccCCCCC--CceEEEEehhhhhhcchHHHHHHHHHhcCCCceEE--
Confidence 4568999999997 69999999999989998 6 8999999988753212 233322221 22222
Q ss_pred CCeEEEccccceeeccc--CCchhhhhHHHHHHHHHHHHHhc--CCCc-EEEECCCCccccceecc-c----CCeeEEEe
Q 023456 99 PPKVVHLYRRKWIEEST--YPRFTMIGQSFGSVYLSWEALCK--FTPL-YYFDTSGYAFTYPLARI-F----GCRVICYT 168 (282)
Q Consensus 99 ~~~fv~l~~~~~l~~~~--~p~~tl~~q~l~~~~la~eal~~--~~pD-v~Ids~g~af~~pv~~~-~----~~~~i~Y~ 168 (282)
+ ..|+|+.. +.+....++....+...+..+.. ...| ++.|+. ..+.|+... . .+++.+||
T Consensus 108 ----v----~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~--~~~~~l~~~~~~p~~~~~i~~~~ 177 (495)
T KOG0853|consen 108 ----V----GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFV--SACVPLLKQLSGPDVIIKIYFYC 177 (495)
T ss_pred ----E----EeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchH--HHHHHHHHHhcCCcccceeEEec
Confidence 1 34454444 33333333332211122211111 2457 555664 446888775 4 48999999
Q ss_pred ecCCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC--CCCc
Q 023456 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRI 246 (282)
Q Consensus 169 HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~--~r~~ 246 (282)
|+|+ +.+ +++ .+.+|.+|+..+++.+.-.....|.+++||.+|+.+++..+.. ..++
T Consensus 178 h~~~------~ll-------------a~r--~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~ 236 (495)
T KOG0853|consen 178 HFPD------SLL-------------AKR--LGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDI 236 (495)
T ss_pred cchH------HHh-------------ccc--cCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCc
Confidence 9998 111 222 4467889999999999999999999999999999999999975 4569
Q ss_pred eEEcCCCCCCccc
Q 023456 247 KRVYPPCDTSGLQ 259 (282)
Q Consensus 247 ~VvYPPVd~~~f~ 259 (282)
.+.||+||.+.+.
T Consensus 237 ~~~y~ei~~s~~~ 249 (495)
T KOG0853|consen 237 TSTYPEIDGSWFT 249 (495)
T ss_pred ceeeccccchhcc
Confidence 9999999988765
No 8
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.70 E-value=5.1e-07 Score=86.16 Aligned_cols=190 Identities=18% Similarity=0.158 Sum_probs=106.2
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
+|-|+|+.+- |-=.+ .+++|.+. |++|.++|...+...+. +.++ ++++...--+...
T Consensus 1 ~il~~~~~~p--~~~~~----la~~L~~~--G~~v~~~~~~~~~~~~~---------~v~~------~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFP--GQFRH----LAPALAAQ--GHEVVFLTEPNAAPPPG---------GVRV------VRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCc--hhHHH----HHHHHHHC--CCEEEEEecCCCCCCCC---------CeeE------EEecCCCCCCCCC
Confidence 5789999995 43333 45899998 99999998775322110 2221 1111000000112
Q ss_pred CCchhhhhHHHH---HHHHHHHHH--hcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhcccccc
Q 023456 116 YPRFTMIGQSFG---SVYLSWEAL--CKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYN 189 (282)
Q Consensus 116 ~p~~tl~~q~l~---~~~la~eal--~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~ 189 (282)
++........+. .+......+ ....||+++...+++++..+... +++|++.|+|++... +..+..++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRA-------EGADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecC-------CCCCCCCC
Confidence 222222222221 111222222 23469999998777766555544 789999999987621 11111111
Q ss_pred cchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCC
Q 023456 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNP 263 (282)
Q Consensus 190 ~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~ 263 (282)
.+. . .+ .....-.+....+.....+.+|.++++|.|+++.+.+.++ .+..|||.+||++.|.+.+.
T Consensus 131 ~~~-~-~~----~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~ 196 (396)
T cd03818 131 PEF-P-PS----LDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQ 196 (396)
T ss_pred CCC-C-Cc----hhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCch
Confidence 110 0 00 0000000111122344566899999999999999999998 78999999999998876543
No 9
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.59 E-value=7.6e-07 Score=81.18 Aligned_cols=178 Identities=16% Similarity=0.021 Sum_probs=103.0
Q ss_pred EEEEEccCCCC--CCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeec
Q 023456 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (282)
Q Consensus 36 ~VafvHp~l~~--~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~ 113 (282)
+|+++..++.. .||.|+++.+.+++|++. ++++.+.+...+.... . ......+.. ...
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~--~~~v~~~~~~~~~~~~-~-~~~~~~~~~-~~~--------------- 60 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKL--DPEEVLLLLPGAPGLL-L-LPLRAALRL-LLR--------------- 60 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhc--CCceEEEEecCccccc-c-ccchhcccc-ccc---------------
Confidence 57788888875 899999999999999998 6776666654321111 0 000000000 000
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCCchhhhhhhhhhcccccccchh
Q 023456 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (282)
Q Consensus 114 ~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~ 193 (282)
.+........+..............||+++....... ..+..+.|.+..+|-.... .....
T Consensus 61 --~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~---~~~~~~~~~i~~~hd~~~~--------------~~~~~ 121 (365)
T cd03809 61 --LPRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAP---LLRLRGVPVVVTIHDLIPL--------------RFPEY 121 (365)
T ss_pred --cccccccchhhHHHHHHHHHhhhcCCCeeeecccccC---cccCCCCCEEEEeccchhh--------------hCccc
Confidence 0000011111111222223334468998877643331 1145789999999954310 00000
Q ss_pred hhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 194 i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
. . ..+...+...+....+.+|.+++.|.++++.+.+.++. +.+..|+++++|.+.+...
T Consensus 122 ---~--~----~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 181 (365)
T cd03809 122 ---F--S----PGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPP 181 (365)
T ss_pred ---C--C----HHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCC
Confidence 0 0 01223344455666678999999999999999999973 3467899999998877654
No 10
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.56 E-value=1.7e-06 Score=79.70 Aligned_cols=176 Identities=15% Similarity=0.091 Sum_probs=100.4
Q ss_pred EEEEEccC--CCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeec
Q 023456 36 SVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (282)
Q Consensus 36 ~VafvHp~--l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~ 113 (282)
||||++.. ....||+|+.+.+.+++|++. |++|.+.|...... .. .....++++ +.+..
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~--g~~v~v~~~~~~~~-~~----~~~~~~i~~------~~~~~------ 61 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVAR--GHEVTVYCRSPYPK-QK----ETEYNGVRL------IHIPA------ 61 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhc--CCCEEEEEccCCCC-Cc----ccccCCceE------EEcCC------
Confidence 58888774 457899999999999999998 89998888653211 10 011112222 11111
Q ss_pred ccCCchhhhhHHHHHHHHHHHHH-hcCCCcEEEECCCCc-cccceecccCCeeEEEeecCCchhhhhhhhhhcccccccc
Q 023456 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYA-FTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (282)
Q Consensus 114 ~~~p~~tl~~q~l~~~~la~eal-~~~~pDv~Ids~g~a-f~~pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~ 191 (282)
++...+.+....+...+.++ ...++|++.+..... ...+..+..+.|++..+|...... ..|
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----------~~~--- 125 (363)
T cd04955 62 ---PEIGGLGTIIYDILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKR----------AKW--- 125 (363)
T ss_pred ---CCccchhhhHHHHHHHHHHHhccCCeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceee----------ccc---
Confidence 00000111111111122222 345577666653211 111223335789998888643110 000
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccC
Q 023456 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQA 260 (282)
Q Consensus 192 ~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~ 260 (282)
. ...++++.+.+.+..+.+|.++++|+++++.+++.|+ .+..+++.++|.+.+..
T Consensus 126 --------~----~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--~~~~~i~ngv~~~~~~~ 180 (363)
T cd04955 126 --------G----RPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYG--RDSTYIPYGADHVVSSE 180 (363)
T ss_pred --------c----cchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcC--CCCeeeCCCcChhhcch
Confidence 0 0112334455566678899999999999999999999 56689999999876553
No 11
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.41 E-value=8.5e-06 Score=72.71 Aligned_cols=180 Identities=14% Similarity=0.137 Sum_probs=101.0
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||+|+.+.....||+|+++.+.+++|++. |++|.+++...+. ... ... ...+....+....
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~--~~~-~~~--------~~~~~~~~~~~~~------ 61 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEK--GHEVTIISLDKGE--PPF-YEL--------DPKIKVIDLGDKR------ 61 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhC--CCeEEEEecCCCC--CCc-ccc--------CCccceeeccccc------
Confidence 58899999986899999999999999987 8999888765421 000 001 1111111111000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceec--ccC-CeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFG-CRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~--~~~-~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
.++ ....+.......+.+....||+++...+. ...++. ..+ .+++.+.|...... .
T Consensus 62 ~~~---~~~~~~~~~~~~~~l~~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~--- 120 (348)
T cd03820 62 DSK---LLARFKKLRRLRKLLKNNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEHNSPDAY-------------K--- 120 (348)
T ss_pred ccc---hhccccchHHHHHhhcccCCCEEEEcCch--HHHHHHHHhhccccEEEecCCCccch-------------h---
Confidence 000 00001111122233455789988876543 112221 234 48888988765110 0
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC-CCCCcceEEE
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC-NPFFSQIISM 271 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~-~~~~~~~~s~ 271 (282)
. ... .. ....+..+.+|.+++.|.+++.......+ .+..++++|++.+.+... +..+..++.+
T Consensus 121 ----~----~~~-~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~vi~~~~~~~~~~~~~~~~~~~i~~~ 184 (348)
T cd03820 121 ----K----RLR-RL-----LLRRLLYRRADAVVVLTEEDRALYYKKFN--KNVVVIPNPLPFPPEEPSSDLKSKRILAV 184 (348)
T ss_pred ----h----hhH-HH-----HHHHHHHhcCCEEEEeCHHHHHHhhccCC--CCeEEecCCcChhhccccCCCCCcEEEEE
Confidence 0 000 00 03455667899999999999844444444 788999999998877665 3323334433
No 12
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.36 E-value=4.3e-06 Score=74.58 Aligned_cols=173 Identities=21% Similarity=0.252 Sum_probs=101.3
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||.++++... .||+|+++.+.+++|.+. +++|.+++...+............ ..... ... .
T Consensus 1 kIl~~~~~~~-~gG~~~~~~~l~~~l~~~--g~~v~v~~~~~~~~~~~~~~~~~~--~~~~~----~~~-~--------- 61 (353)
T cd03811 1 KILFVIPSLG-GGGAERVLLNLANGLDKR--GYDVTLVVLRDEGDYLELLPSNVK--LIPVR----VLK-L--------- 61 (353)
T ss_pred CeEEEeeccc-CCCcchhHHHHHHHHHhc--CceEEEEEcCCCCccccccccchh--hhcee----eee-c---------
Confidence 5889999997 799999999999999887 899888876543111000000000 00000 000 0
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecc---cCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI---FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~---~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
... .... ......+.+....||+++.... ..+..+... .+.|.+.++|..... +. .
T Consensus 62 ~~~--~~~~---~~~~~~~~~~~~~~dii~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-----------~--- 120 (353)
T cd03811 62 KSL--RDLL---AILRLRRLLRKEKPDVVISHLT-TTPNVLALLAARLGTKLIVWEHNSLSL-EL-----------K--- 120 (353)
T ss_pred ccc--cchh---HHHHHHHHHHhcCCCEEEEcCc-cchhHHHHHHhhcCCceEEEEcCcchh-hh-----------c---
Confidence 000 0000 1111123345568998777643 111122122 258999999987610 00 0
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
.. +... ..+....+.+|.+++.|.+.++.+++.++. ..+..++++|+|.+.+...+
T Consensus 121 ---~~------~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 177 (353)
T cd03811 121 ---RK------LRLL-----LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALA 177 (353)
T ss_pred ---cc------hhHH-----HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCccc
Confidence 00 0000 445566778999999999999999999984 34678999999988776554
No 13
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.33 E-value=1.4e-05 Score=71.44 Aligned_cols=180 Identities=17% Similarity=0.157 Sum_probs=104.4
Q ss_pred EEEEEccCCCCC-CchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~l~~~-GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
||+++++..... ||++..+...+++|.+. |++|.+++...+...... ........ .. .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~i~~~~~~~~~~~~-----~~~~~~~~---~~-----------~ 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAAR--GHEVTVLTPGDGGLPDEE-----EVGGIVVV---RP-----------P 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhc--CceEEEEecCCCCCCcee-----eecCccee---cC-----------C
Confidence 578888887666 99999999999999987 899988887643211000 00000000 00 0
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc--eecccCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p--v~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
...................+.+....||+++.......... ..+..+.+.+..+|.+... . ...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-----~--------~~~- 125 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFG-----R--------PGN- 125 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhh-----c--------ccc-
Confidence 00000111111111222233455668997766543332222 1223789999999987611 0 000
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCC-CCceEEcCCCCCCcccC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQA 260 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~-r~~~VvYPPVd~~~f~~ 260 (282)
. ................+.+|.+++.|.++++.+++.++.. .+..++++|+|.+.+..
T Consensus 126 ----~------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 184 (374)
T cd03801 126 ----E------LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRP 184 (374)
T ss_pred ----c------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCc
Confidence 0 1112223344455566789999999999999999999832 36889999999887743
No 14
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.32 E-value=5.8e-06 Score=76.76 Aligned_cols=176 Identities=13% Similarity=0.030 Sum_probs=97.2
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
|||++++. ...||+|+++.+.+++|.+. |++|.++|...+.. .... .-+... ...+. ...+..
T Consensus 1 mki~~~~~--p~~gG~~~~~~~la~~L~~~--G~~v~v~~~~~~~~---~~~~---~~~~~~------~~~~~-~~~~~~ 63 (371)
T cd04962 1 MKIGIVCY--PTYGGSGVVATELGKALARR--GHEVHFITSSRPFR---LDEY---SPNIFF------HEVEV-PQYPLF 63 (371)
T ss_pred CceeEEEE--eCCCCccchHHHHHHHHHhc--CCceEEEecCCCcc---hhhh---ccCeEE------EEecc-cccchh
Confidence 57888874 35799999999999999999 89998988653211 1000 001111 00000 000000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc-e-ec-c---cCCeeEEEeecCCchhhhhhhhhhccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-AR-I---FGCRVICYTHYPTISLDMISRVREGSSMY 188 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p-v-~~-~---~~~~~i~Y~HyP~is~dml~~v~~~~~~~ 188 (282)
..+.. .+.......+.+.+..||++.-....+...+ . .+ . .+.|++.-+|..+.. ++
T Consensus 64 ~~~~~-----~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~---------- 126 (371)
T cd04962 64 QYPPY-----DLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LV---------- 126 (371)
T ss_pred hcchh-----HHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cc----------
Confidence 01111 1111122234456678997765432221111 1 11 1 278888888865411 00
Q ss_pred ccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 189 ~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
.. .. .+ ..+..+..+.+|.+++.|.+.++++.+.+....+..|++.++|.+.|.+.
T Consensus 127 ~~------~~-------~~----~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~ 182 (371)
T cd04962 127 GQ------DP-------SF----QPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPK 182 (371)
T ss_pred cc------cc-------cc----hHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCC
Confidence 00 00 01 11233445679999999999999999888644567889999988776544
No 15
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.25 E-value=2.1e-05 Score=77.11 Aligned_cols=185 Identities=15% Similarity=0.193 Sum_probs=100.9
Q ss_pred CCCcEEEEE-ccC-CCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccc
Q 023456 32 NRTTSVAFF-HPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (282)
Q Consensus 32 ~~~~~Vafv-Hp~-l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~ 109 (282)
.++|||+++ ||+ ....||.|+.+.+.+++|.+. |++|.+.|...+. +++. -+.++.. .....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~--G~eV~vlt~~~~~-~~~~-------~g~~v~~------~~~~~ 119 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM--GDEVLVVTTDEGV-PQEF-------HGAKVIG------SWSFP 119 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHC--CCeEEEEecCCCC-Cccc-------cCceeec------cCCcC
Confidence 567899955 754 345688999999999999998 9999998876421 1111 1111100 00000
Q ss_pred eeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccce---ecccCCeeEEEeecCCchhhhhhhhhhccc
Q 023456 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (282)
Q Consensus 110 ~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv---~~~~~~~~i~Y~HyP~is~dml~~v~~~~~ 186 (282)
+ ..+..+.. .+.......+.+.+.+||++.-+.......+. .+..+.|++.-+|.-. . + ...
T Consensus 120 -~--~~~~~~~~---~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~-~-~---~~~---- 184 (465)
T PLN02871 120 -C--PFYQKVPL---SLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHV-P-V---YIP---- 184 (465)
T ss_pred -C--ccCCCcee---eccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCc-h-h---hhh----
Confidence 0 00000000 00000112334566789977654322222221 1336788887777421 0 0 000
Q ss_pred ccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 187 ~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
........+.+ ..+.++..+.+|.++++|+..++.+++.... ..+..|++.++|++.|.+.
T Consensus 185 ---------~~~~~~~~~~~-----~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~ 246 (465)
T PLN02871 185 ---------RYTFSWLVKPM-----WDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPR 246 (465)
T ss_pred ---------cccchhhHHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCc
Confidence 00001111111 2234455678999999999999999987632 2467888999999988654
No 16
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.13 E-value=0.0001 Score=67.13 Aligned_cols=172 Identities=15% Similarity=0.048 Sum_probs=101.3
Q ss_pred cEEEEEccCC-----CCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccc
Q 023456 35 TSVAFFHPNT-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (282)
Q Consensus 35 ~~VafvHp~l-----~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~ 109 (282)
|||+++-+++ ...||+|+.+.+.+++|.+. |++|.+++...+...... ..... ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~--g~~V~v~~~~~~~~~~~~---------~~~~~--------~~~ 61 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVAR--GHEVTLFASGDSKTAAPL---------VPVVP--------EPL 61 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhc--CceEEEEecCCCCcccce---------eeccC--------CCc
Confidence 6899988876 25799999999999999998 999999886543211100 00000 000
Q ss_pred eeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCCchhhhhhhhhhcccccc
Q 023456 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (282)
Q Consensus 110 ~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~ 189 (282)
+... + ..............+.+.+.+||++.......... ..+..+.|++.-.|..... +.
T Consensus 62 ~~~~---~--~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~~-------------~~ 122 (335)
T cd03802 62 RLDA---P--GRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPDP-------------EL 122 (335)
T ss_pred cccc---c--hhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCCc-------------cc
Confidence 0000 0 00011111222233455667899877654332221 3334788999999987610 00
Q ss_pred cchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCCCCcceE
Q 023456 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQII 269 (282)
Q Consensus 190 ~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~~~~~~~ 269 (282)
. + ........|.+++-|.+.++...+. .+..|++.++|++.|.+.+..+..|+
T Consensus 123 -------~------~----------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~~~~~~~i~ 175 (335)
T cd03802 123 -------L------K----------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFRGPKGDYLL 175 (335)
T ss_pred -------c------h----------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCCCCCCCEEE
Confidence 0 0 0123456788999999887765543 46889999999999887554444455
Q ss_pred EE
Q 023456 270 SM 271 (282)
Q Consensus 270 s~ 271 (282)
.+
T Consensus 176 ~~ 177 (335)
T cd03802 176 FL 177 (335)
T ss_pred EE
Confidence 44
No 17
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.11 E-value=5.8e-05 Score=69.33 Aligned_cols=161 Identities=16% Similarity=0.094 Sum_probs=93.1
Q ss_pred EccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCch
Q 023456 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRF 119 (282)
Q Consensus 40 vHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~ 119 (282)
+.|.++ .||+|+++.+++++|.+. |++|.++|.... ..+ .... .+++.. .+... ....+
T Consensus 3 ~~~~~~-~gG~e~~~~~l~~~L~~~--g~~v~v~~~~~~-~~~----~~~~-~~~~~~------~~~~~------~~~~~ 61 (355)
T cd03819 3 VLPALE-SGGVERGTLELARALVER--GHRSLVASAGGR-LVA----ELEA-EGSRHI------KLPFI------SKNPL 61 (355)
T ss_pred cchhhc-cCcHHHHHHHHHHHHHHc--CCEEEEEcCCCc-hHH----HHHh-cCCeEE------Ecccc------ccchh
Confidence 357776 599999999999999998 999988875431 111 1111 122211 11000 00001
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccce--ecccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhcc
Q 023456 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (282)
Q Consensus 120 tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv--~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~ 197 (282)
..+..+....+.+.+.+||+++..+........ .+..+.|.+..+|-... . .
T Consensus 62 ----~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~----------------~------~ 115 (355)
T cd03819 62 ----RILLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYS----------------V------N 115 (355)
T ss_pred ----hhHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchh----------------h------H
Confidence 111112222334566789977765322211111 12357888888885330 0 0
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 198 ~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
. + +....+.+|.++++|+++++.+++.++. +.+..+++.++|.+.|.+.+
T Consensus 116 ---~----~--------~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~ 166 (355)
T cd03819 116 ---F----R--------YNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGA 166 (355)
T ss_pred ---H----H--------HHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccc
Confidence 0 1 1122346899999999999999988874 24578899999988876543
No 18
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.11 E-value=8.9e-05 Score=71.02 Aligned_cols=202 Identities=9% Similarity=-0.076 Sum_probs=102.6
Q ss_pred cEEEEEcc-CCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhcc-ccceeecCCCeEEEccccceee
Q 023456 35 TSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGVELLHPPKVVHLYRRKWIE 112 (282)
Q Consensus 35 ~~VafvHp-~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~-~f~~~l~~~~~fv~l~~~~~l~ 112 (282)
|||+++.. +....||+|+.+.+.+++|.+. |++|.++|.........+.+.... .........++..+++. +.+
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~--G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~--~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAAR--GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPL--YVP 76 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccc--cCC
Confidence 58888875 4556789999999999999998 999999996532100000000000 00000011112222211 110
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHh---cCCCcEEEECCCCccccce----ecccCCeeEEEeecCCchhhhhhhhhhcc
Q 023456 113 ESTYPRFTMIGQSFGSVYLSWEALC---KFTPLYYFDTSGYAFTYPL----ARIFGCRVICYTHYPTISLDMISRVREGS 185 (282)
Q Consensus 113 ~~~~p~~tl~~q~l~~~~la~eal~---~~~pDv~Ids~g~af~~pv----~~~~~~~~i~Y~HyP~is~dml~~v~~~~ 185 (282)
... ..+..+.........++..+. ..+||+++-+....++.+. .+..+.|.+..+|- +..|.. .+.
T Consensus 77 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d--~~~~~~---~~~- 149 (412)
T PRK10307 77 KQP-SGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQD--YEVDAA---FGL- 149 (412)
T ss_pred CCc-cHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEecc--CCHHHH---HHh-
Confidence 000 001111111001111112211 2579987765433222221 23367788766662 111111 000
Q ss_pred cccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 186 ~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
..... ....+++.+++.+..+.+|.+++.|..+++.+++....+.+..|++.++|++.|.+.
T Consensus 150 ------~~~~~--------~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~ 211 (412)
T PRK10307 150 ------GLLKG--------GKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPV 211 (412)
T ss_pred ------CCccC--------cHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCC
Confidence 00000 122344555677777899999999999999998753223457789999999887654
No 19
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.07 E-value=5.8e-05 Score=68.28 Aligned_cols=176 Identities=14% Similarity=0.037 Sum_probs=92.8
Q ss_pred EEEEEccCCCC--CCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeec
Q 023456 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (282)
Q Consensus 36 ~VafvHp~l~~--~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~ 113 (282)
||.|+-++... .||+|+++...+++|.+. |++|.+++........... ..... ...... .+...
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~~~~---~~~~~-~~~~~~--------~~~~~ 66 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKR--GHEVAVLTAGEDPPRQDKE---VIGVV-VYGRPI--------DEVLR 66 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhc--CCceEEEeCCCCCCCcccc---cccce-eecccc--------ccccC
Confidence 35566544433 499999999999999988 8999888866432111000 00000 000000 00000
Q ss_pred ccCCc--hhhhhH-HHHHHHHHHHHHhcCCCcEEEECCCCcccccee---cccCCeeEEEeecCCchhhhhhhhhhcccc
Q 023456 114 STYPR--FTMIGQ-SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSM 187 (282)
Q Consensus 114 ~~~p~--~tl~~q-~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~ 187 (282)
..... ...... .........+.+...+||+++..........+. +..+.|++...|-.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------------ 134 (359)
T cd03823 67 SALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------------ 134 (359)
T ss_pred CCchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------------
Confidence 00000 000000 001111122334567899877654333222222 235788888888543100
Q ss_pred cccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 188 ~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
.. . ... ....|.++++|++.++.+++......+..++++++|.+.+...+
T Consensus 135 -~~------~-------~~~-----------~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~ 184 (359)
T cd03823 135 -PR------Q-------GLF-----------KKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPR 184 (359)
T ss_pred -ch------h-------hhh-----------ccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccc
Confidence 00 0 000 01119999999999999988765334678999999998876654
No 20
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=98.05 E-value=3.8e-06 Score=67.89 Aligned_cols=152 Identities=20% Similarity=0.245 Sum_probs=70.6
Q ss_pred CchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhhhHHHH
Q 023456 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (282)
Q Consensus 48 GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~~q~l~ 127 (282)
||+|+.+.+.+++|.+. |++|.++|...+...+ +.. .-+..+ ..+. +++... .+.... .+
T Consensus 1 GG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~----~~~-~~~~~~------~~~~----~~~~~~-~~~~~~-~~- 60 (160)
T PF13579_consen 1 GGIERYVRELARALAAR--GHEVTVVTPQPDPEDD----EEE-EDGVRV------HRLP----LPRRPW-PLRLLR-FL- 60 (160)
T ss_dssp SHHHHHHHHHHHHHHHT--T-EEEEEEE---GGG-----SEE-ETTEEE------EEE------S-SSS-GGGHCC-HH-
T ss_pred CCHHHHHHHHHHHHHHC--CCEEEEEecCCCCccc----ccc-cCCceE------Eecc----CCccch-hhhhHH-HH-
Confidence 89999999999999999 9999998865421100 000 011111 1111 111111 111111 11
Q ss_pred HHHHHHHH-H--hcCCCcEEEECCCCc-cccceec-ccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhH
Q 023456 128 SVYLSWEA-L--CKFTPLYYFDTSGYA-FTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (282)
Q Consensus 128 ~~~la~ea-l--~~~~pDv~Ids~g~a-f~~pv~~-~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~ 202 (282)
..+.. + ...+||++.-....+ +.--+++ ..+.|++.-+|-.... . . .++
T Consensus 61 ---~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~---------------~------~--~~~ 114 (160)
T PF13579_consen 61 ---RRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFR---------------R------G--SRW 114 (160)
T ss_dssp ---HHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-----------------------------H
T ss_pred ---HHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchh---------------h------c--cch
Confidence 12222 2 556799776543221 1111223 3689999999953310 0 0 112
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEc
Q 023456 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVY 250 (282)
Q Consensus 203 ~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvY 250 (282)
.+.+ +..++++..+.+|.++++|.++++.+.+ ++. +.+..||+
T Consensus 115 ~~~~----~~~~~~~~~~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vip 158 (160)
T PF13579_consen 115 KRRL----YRWLERRLLRRADRVIVVSEAMRRYLRR-YGVPPDRIHVIP 158 (160)
T ss_dssp HHHH----HHHHHHHHHHH-SEEEESSHHHHHHHHH-H---GGGEEE--
T ss_pred hhHH----HHHHHHHHHhcCCEEEECCHHHHHHHHH-hCCCCCcEEEeC
Confidence 2222 3444566666799999999999999999 773 23445554
No 21
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.05 E-value=4.3e-05 Score=72.05 Aligned_cols=166 Identities=18% Similarity=0.256 Sum_probs=91.9
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
|||+++.+.....||+|+++.+.+++|.+...|+++++.+.... ......+.+.. ....+. +.+.
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~-~~~~~~~~~~~--~~~~~~----~~~~-------- 65 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDK-MDKAWLKEIKY--AQSFSN----IKLS-------- 65 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCC-CChHHHHhcch--hccccc----chhh--------
Confidence 68999999888789999999999999998744688777665432 11111111110 000000 0000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc-eec-ccC--CeeEEEeecCCchhhhhhhhhhccccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR-IFG--CRVICYTHYPTISLDMISRVREGSSMYNN 190 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p-v~~-~~~--~~~i~Y~HyP~is~dml~~v~~~~~~~~~ 190 (282)
+.+. .. ......+.+.+..||+++.....+.... .++ ..+ .+++...|.....
T Consensus 66 -~~~~---~~---~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~---------------- 122 (359)
T PRK09922 66 -FLRR---AK---HVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDH---------------- 122 (359)
T ss_pred -hhcc---cH---HHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccc----------------
Confidence 0000 00 1111123456678998887642221111 111 223 4566666754300
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccc
Q 023456 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ 259 (282)
Q Consensus 191 ~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~ 259 (282)
. .... +.+ -..+|.++++|.++++.+++. +. +.+..++|.|+|.+.+.
T Consensus 123 ------~----~~~~-~~~---------~~~~d~~i~~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~ 171 (359)
T PRK09922 123 ------K----KHAE-CKK---------ITCADYHLAISSGIKEQMMAR-GISAQRISVIYNPVEIKTII 171 (359)
T ss_pred ------c----chhh-hhh---------hhcCCEEEEcCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHcc
Confidence 0 0000 000 147999999999999999875 42 23578999999976553
No 22
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.04 E-value=8.4e-05 Score=67.71 Aligned_cols=163 Identities=16% Similarity=0.033 Sum_probs=91.5
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||+|+.++....||.|+++++.+++|.+. ++++.+++...... .. ...... .. .+.....
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~--~~-----~~~~~~-~~--~~~~~~~-------- 60 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSAR--GPDVLVVSVAALYP--SL-----LYGGEQ-EV--VRVIVLD-------- 60 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhc--CCeEEEEEeecccC--cc-----cCCCcc-cc--eeeeecC--------
Confidence 68999999987899999999999999998 88887776553211 00 000000 00 0000000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccce-----ec---ccCCeeEEEeecCCchhhhhhhhhhcccc
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-----AR---IFGCRVICYTHYPTISLDMISRVREGSSM 187 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv-----~~---~~~~~~i~Y~HyP~is~dml~~v~~~~~~ 187 (282)
.+ . ......+.+...+||+++-+....+.-|. .. ..+.|++..+|.+... .
T Consensus 61 ~~-~--------~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-----~------- 119 (366)
T cd03822 61 NP-L--------DYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLH-----E------- 119 (366)
T ss_pred Cc-h--------hHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcc-----c-------
Confidence 00 0 11123344566789977754322211121 11 1688999999987210 0
Q ss_pred cccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC--CCCceEEcCCCCCCcccCC
Q 023456 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 188 ~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~--~r~~~VvYPPVd~~~f~~~ 261 (282)
. . ...+ ++.+...+.+|.+++.| .+..++.+.. +.+..+++.|++...+...
T Consensus 120 -~-------~---~~~~--------~~~~~~~~~~d~ii~~s---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 173 (366)
T cd03822 120 -P-------R---PGDR--------ALLRLLLRRADAVIVMS---SELLRALLLRAYPEKIAVIPHGVPDPPAEPP 173 (366)
T ss_pred -c-------c---hhhh--------HHHHHHHhcCCEEEEee---HHHHHHHHhhcCCCcEEEeCCCCcCcccCCc
Confidence 0 0 0001 11223345799999997 3444444432 1578899999987776554
No 23
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.04 E-value=0.00011 Score=67.19 Aligned_cols=174 Identities=11% Similarity=0.016 Sum_probs=96.1
Q ss_pred EEEEccCCCC-CCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 37 VAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 37 VafvHp~l~~-~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
|..+.++..- .||+|+.+.+++++|.+. |++|.+++...+.... .... -+.. +..+.. +.....
T Consensus 2 il~i~~~~~p~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~--~~~~---~~~~------~~~~~~--~~~~~~ 66 (357)
T cd03795 2 VLHVGKFYPPDRGGIEQVIRDLAEGLAAR--GIEVAVLCASPEPKGR--DEER---NGHR------VIRAPS--LLNVAS 66 (357)
T ss_pred eeEecCCCCCCCCcHHHHHHHHHHHHHhC--CCceEEEecCCCCcch--hhhc---cCce------EEEeec--cccccc
Confidence 4555444433 799999999999999998 8999888866421110 0000 0111 111110 000001
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecc--cCCeeEEEeecCCchhhhhhhhhhcccccccchh
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI--FGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~--~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~ 193 (282)
.+... .+...+. +....||+++-..+.......... .+.+.+...|.....
T Consensus 67 ~~~~~-------~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------------- 119 (357)
T cd03795 67 TPFSP-------SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVK------------------- 119 (357)
T ss_pred ccccH-------HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhc-------------------
Confidence 11100 1111111 445679966544333322221111 467788777864311
Q ss_pred hhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 194 i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
.. ...+.+..+..+..+.+|.+++-|+.+.+.++..++.+.+..++++++|.+.+.+.+
T Consensus 120 --~~--------~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~ 178 (357)
T cd03795 120 --QK--------LLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPD 178 (357)
T ss_pred --cc--------hhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcc
Confidence 00 111223334445667899999999999999988876445788999999988776543
No 24
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.01 E-value=0.00013 Score=65.59 Aligned_cols=173 Identities=19% Similarity=0.183 Sum_probs=97.3
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||+++++.++. ||+|+++...+++|.+. ++++.+++...+. ...+...+ .++++ ..+.... .
T Consensus 1 ~i~~i~~~~~~-gG~~~~~~~l~~~l~~~--~~~v~~~~~~~~~---~~~~~~~~-~~i~v------~~~~~~~-----~ 62 (365)
T cd03807 1 KVLHVITGLDV-GGAERMLVRLLKGLDRD--RFEHVVISLTDRG---ELGEELEE-AGVPV------YCLGKRP-----G 62 (365)
T ss_pred CeEEEEeeccC-ccHHHHHHHHHHHhhhc--cceEEEEecCcch---hhhHHHHh-cCCeE------EEEeccc-----c
Confidence 58999999975 99999999999999887 7777776654221 11122221 22222 1111100 0
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc-e-ecc-cCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p-v-~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
.... ..+....+.+.+.+||+++....+..... + .+. .+.+++...|--... .
T Consensus 63 ~~~~-------~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~--- 118 (365)
T cd03807 63 RPDP-------GALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLD--------------L--- 118 (365)
T ss_pred cccH-------HHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccc--------------c---
Confidence 0111 11222334456678997776432221111 1 122 456666666654310 0
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
. +. ..+...++..+..+.+|.++++|.++++.+++. +. ..+..+++.++|.+.+.+..
T Consensus 119 ----~---~~----~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~ 177 (365)
T cd03807 119 ----G---KK----STRLVARLRRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDL 177 (365)
T ss_pred ----c---ch----hHhHHHHHHHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcc
Confidence 0 00 112233345556678999999999999999885 32 24567899999987775543
No 25
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.98 E-value=0.0001 Score=67.83 Aligned_cols=174 Identities=12% Similarity=0.051 Sum_probs=95.3
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||.++|+++ ..||+|+.+.+.+++|.+. +++|.+++..... +...+.+. ..+..+ ..+.
T Consensus 1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~--~~~v~~i~~~~~~--~~~~~~~~-~~~~~~------~~~~--------- 59 (358)
T cd03812 1 KILHIVGTM-NRGGIETFIMNYYRNLDRS--KIQFDFLVTSKEE--GDYDDEIE-KLGGKI------YYIP--------- 59 (358)
T ss_pred CEEEEeCCC-CCccHHHHHHHHHHhcCcc--ceEEEEEEeCCCC--cchHHHHH-HcCCeE------EEec---------
Confidence 689999999 5899999999999999876 8998888866421 11111111 112211 1111
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccce-e-cccCCe-eEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-A-RIFGCR-VICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv-~-~~~~~~-~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
++.....+. +....+.+...+||++.-........+. + +..+.+ .+...|..... ...
T Consensus 60 -~~~~~~~~~---~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------~~~ 120 (358)
T cd03812 60 -ARKKNPLKY---FKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDS---------------HDK 120 (358)
T ss_pred -CCCccHHHH---HHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccc---------------ccc
Confidence 001111111 1122234456789977665332111111 1 123433 35556654310 000
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
..+...+ ........+.+|.+++.|...++.+.+... +.+..|++++||++.+...+
T Consensus 121 ---------~~~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~vi~ngvd~~~~~~~~ 177 (358)
T cd03812 121 ---------KKKILKY---KVLRKLINRLATDYLACSEEAGKWLFGKVK-NKKFKVIPNGIDLEKFIFNE 177 (358)
T ss_pred ---------cchhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCCC-cccEEEEeccCcHHHcCCCc
Confidence 0000011 233344566799999999999999877532 35678999999998775543
No 26
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.98 E-value=0.00024 Score=63.73 Aligned_cols=172 Identities=13% Similarity=0.037 Sum_probs=92.1
Q ss_pred CCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhhhHHH
Q 023456 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (282)
Q Consensus 47 ~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~~q~l 126 (282)
.||+++.+...+++|++. |++|.++|...+..................... ..... ..+.........
T Consensus 13 ~~g~~~~~~~~~~~l~~~--g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~ 80 (377)
T cd03798 13 NGGGGIFVKELARALAKR--GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVL-------LPVVP---LLKGPLLYLLAA 80 (377)
T ss_pred CchHHHHHHHHHHHHHHC--CCceEEEecCCCCCCchhhcccccccccccccC-------cchhh---ccccchhHHHHH
Confidence 599999999999999988 899988887643211100000000000000000 00000 001111111111
Q ss_pred HHHHHHHHHHh--cCCCcEEEECCCCcccccee---cccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhh
Q 023456 127 GSVYLSWEALC--KFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (282)
Q Consensus 127 ~~~~la~eal~--~~~pDv~Ids~g~af~~pv~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s 201 (282)
. ...+.+. ...||+++............ +..+.|++.++|.+.... +. . ..
T Consensus 81 ~---~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------~~-------~--~~ 136 (377)
T cd03798 81 R---ALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL------------LP-------R--KR 136 (377)
T ss_pred H---HHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc------------cC-------c--hh
Confidence 1 1122344 67899666543322111111 124679999999876210 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 202 ~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
.....+....+.+|.+++.|.+.++.+++.+..+.+..++.+++|.+.+.+.+
T Consensus 137 --------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 189 (377)
T cd03798 137 --------LLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPAD 189 (377)
T ss_pred --------hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcc
Confidence 22233444556899999999999999999853236788899999988776554
No 27
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.97 E-value=0.00016 Score=65.54 Aligned_cols=183 Identities=11% Similarity=0.070 Sum_probs=98.5
Q ss_pred EEEEEccC-CCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~-l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
||.++++. ....||+++.+...+++|.+. |++|.++|........ .... ..... ..... .
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~------~~~~-~~~~~----~~~~~-~----- 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKR--GHEVYVVAPSYPGAPE------EEEV-VVVRP----FRVPT-F----- 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHc--CCeEEEEeCCCCCCCc------cccc-ccccc----ccccc-c-----
Confidence 35566544 456788999999999999998 8999888765321100 0000 00000 00000 0
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccce---ecccCCeeEEEeecCCchhhhhhhhhhcccccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv---~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~ 191 (282)
.+.++.... .......+.+...+||+++........... .+..+.+++..+|.+.. ++....
T Consensus 62 ~~~~~~~~~---~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~---------- 126 (374)
T cd03817 62 KYPDFRLPL---PIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYV---------- 126 (374)
T ss_pred hhhhhhccc---cHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHH----------
Confidence 001111111 111112223566789977665332211111 12368899999998751 121110
Q ss_pred hhhhccchhhHHHHHHHHHHH-HHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 192 ASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 192 ~~i~~~~~~s~~k~~Y~~~~~-~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
... ....+ .... ..+....+.+|.++++|.+.++.+++... ..+..|+++++|.+.+...+
T Consensus 127 ---~~~--~~~~~----~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~ 188 (374)
T cd03817 127 ---PLG--RLLAR----AVVRRKLSRRFYNRCDAVIAPSEKIADLLREYGV-KRPIEVIPTGIDLDRFEPVD 188 (374)
T ss_pred ---hcc--cchhH----HHHHHHHHHHHhhhCCEEEeccHHHHHHHHhcCC-CCceEEcCCccchhccCccc
Confidence 000 00111 1111 45566777899999999999999887543 23468888899988776654
No 28
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.92 E-value=0.00021 Score=68.36 Aligned_cols=180 Identities=14% Similarity=0.130 Sum_probs=94.0
Q ss_pred EEEEcc-CCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 37 VAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 37 VafvHp-~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
|+++=+ +....||+|+.+.+.+++|.+. |++|+++|...+.... .+. ..-++++ .+++...+.....
T Consensus 2 I~~v~~~~~p~~GG~e~~~~~la~~L~~~--G~~V~v~~~~~~~~~~---~~~-~~~~i~v------~~~p~~~~~~~~~ 69 (398)
T cd03796 2 ICMVSDFFYPNLGGVETHIYQLSQCLIKR--GHKVVVITHAYGNRVG---IRY-LTNGLKV------YYLPFVVFYNQST 69 (398)
T ss_pred eeEEeeccccccccHHHHHHHHHHHHHHc--CCeeEEEeccCCcCCC---ccc-ccCceeE------EEecceeccCCcc
Confidence 444433 3445799999999999999999 9999999975321100 000 0011221 1111101100001
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCcccc----ceecccCCeeEEEeecCCchhhhhhhhhhcccccccc
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY----PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~----pv~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~ 191 (282)
.+ ..+..+....+.+.+.+||++--........ ...+..+.|++.=.|... . +..
T Consensus 70 ~~------~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~-~-------------~~~- 128 (398)
T cd03796 70 LP------TFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLF-G-------------FAD- 128 (398)
T ss_pred cc------chhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccc-c-------------ccc-
Confidence 11 1111222222344566899776653332111 112335777776666422 0 000
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCCC
Q 023456 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACNP 263 (282)
Q Consensus 192 ~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~~ 263 (282)
.... ...+..++..+.+|.+++.|+...+.+....+. ..+..++|..+|++.|.+.+.
T Consensus 129 ----------~~~~----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~ 187 (398)
T cd03796 129 ----------ASSI----HTNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPS 187 (398)
T ss_pred ----------hhhH----HhhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcc
Confidence 0000 111233455678999999999999876444442 245789999999988876543
No 29
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.90 E-value=0.00024 Score=64.19 Aligned_cols=184 Identities=17% Similarity=0.108 Sum_probs=96.3
Q ss_pred EEEEEccCCC-CCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~l~-~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
||.++.+.+. ..||+|+++.+.+++|++. |++|.++|...+.... . .... ...... .... ..
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~-~-~~~~---~~~~~~----~~~~-~~----- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKL--GHEVTVATTDAGGDPL-L-VALN---GVPVKL----FSIN-VA----- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhc--CCcEEEEecCCCCccc-h-hhcc---Cceeee----cccc-hh-----
Confidence 5788888874 6899999999999999888 9999998866432111 0 0000 000000 0000 00
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCC-ccccceec---ccCCeeEEEeecCCchhhhhhhhhhccccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGY-AFTYPLAR---IFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~-af~~pv~~---~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~ 190 (282)
.+ .......+......+.......||+++-.... .+..+... ..+.|++.+.|...-. +..
T Consensus 64 -~~-~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~~ 128 (375)
T cd03821 64 -YG-LNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDP-------------WAL 128 (375)
T ss_pred -hh-hhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccc-------------ccc
Confidence 00 00000000011111122234579966654211 11122222 2578888888864310 000
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 191 ~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
... ...+.++.. .......+.+|.++++|+......++... +.+..|+++++|.+.+...+
T Consensus 129 ----~~~---~~~~~~~~~---~~~~~~~~~~~~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~ 189 (375)
T cd03821 129 ----PHK---ALKKRLAWF---LFERRLLQAAAAVHATSEQEAAEIRRLGL-KAPIAVIPNGVDIPPFAALP 189 (375)
T ss_pred ----ccc---hhhhHHHHH---HHHHHHHhcCCEEEECCHHHHHHHHhhCC-cccEEEcCCCcChhccCcch
Confidence 001 111122211 12344567899999999988888776544 24678899999998886653
No 30
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.87 E-value=8.9e-05 Score=67.34 Aligned_cols=179 Identities=15% Similarity=0.021 Sum_probs=93.6
Q ss_pred EEEEEccCC-CCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 36 SVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~l-~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
||+++.+.. ...||+|+.+...+++|++. |++|.++|...... ... .. -...++. .....
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~-~~~---~~--~~~~~~~----~~~~~------- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRAR--GHEVLVIAPGPFRE-SEG---PA--RVVPVPS----VPLPG------- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHC--CCEEEEEeCCchhh-ccC---CC--Cceeecc----cccCc-------
Confidence 466666444 44599999999999999998 89998988664211 000 00 0011100 00000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCcccccee---cccCCeeEEEeecCCchhhhhhhhhhcccccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~ 191 (282)
++....... ....-.+.+...+||+++-.+...+..... +..+.|.+..+|... . ....
T Consensus 62 -~~~~~~~~~---~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~~~~--------- 123 (364)
T cd03814 62 -YPEIRLALP---PRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDF-P----EYLR--------- 123 (364)
T ss_pred -ccceEeccc---chhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecCh-H----HHhh---------
Confidence 000000000 001111223456899665332222221111 236788999898643 1 0100
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 192 ~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
.. ..... ...+..+..+..+.+|.+++.|.+.++.+.+... ....++++++|.+.|.+..
T Consensus 124 ----~~-~~~~~----~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~ 183 (364)
T cd03814 124 ----YY-GLGPL----SWLAWAYLRWFHNRADRVLVPSPSLADELRARGF--RRVRLWPRGVDTELFHPRR 183 (364)
T ss_pred ----hc-ccchH----hHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCC--CceeecCCCccccccCccc
Confidence 00 00011 1122333444566899999999999997766554 5678888899988775543
No 31
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.84 E-value=0.0011 Score=68.93 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCC-CCceEEcCCCCCCcccC
Q 023456 221 CADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQA 260 (282)
Q Consensus 221 ~~D~vlvNSs~T~~~Ik~~~~~~-r~~~VvYPPVd~~~f~~ 260 (282)
..+.+++||.++++.+.+.++.+ .+..|||.+||++.|.+
T Consensus 458 ~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~ 498 (694)
T PRK15179 458 RGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQ 498 (694)
T ss_pred CCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCC
Confidence 46899999999999998887742 35789999999887754
No 32
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.81 E-value=0.00036 Score=63.19 Aligned_cols=199 Identities=12% Similarity=0.050 Sum_probs=99.1
Q ss_pred EEEEEccCC-CCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecc
Q 023456 36 SVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (282)
Q Consensus 36 ~VafvHp~l-~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~ 114 (282)
||.|+-+.. ...||+|+.+...+++|++. |++|.+++............. ........+.+..+..... .
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~ 71 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKR--GHEVTVITGSPNYPSGKIYKG----YKREEVDGVRVHRVPLPPY---K 71 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhC--CceEEEEecCCCccccccccc----ceEEecCCeEEEEEecCCC---C
Confidence 355555544 34489999999999999998 899988876542111100000 0001111111221111000 0
Q ss_pred cCCchhhhhHHHHHHHHHHHHH--hcCCCcEEEECC-CCccccceec---ccCCeeEEEeecCCchhhhhhhhhhccccc
Q 023456 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTS-GYAFTYPLAR---IFGCRVICYTHYPTISLDMISRVREGSSMY 188 (282)
Q Consensus 115 ~~p~~tl~~q~l~~~~la~eal--~~~~pDv~Ids~-g~af~~pv~~---~~~~~~i~Y~HyP~is~dml~~v~~~~~~~ 188 (282)
....+..+...+.........+ ....||+++-.. ......+... ..+.|++.++|-..-. .+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-~~~~~-------- 142 (394)
T cd03794 72 KNGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPE-SAVAL-------- 142 (394)
T ss_pred ccchHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcch-hHHHc--------
Confidence 0000011111111111122222 356799666553 2211222221 2478999999964310 10000
Q ss_pred ccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 189 ~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
..... +....+.+..++.+..+.+|.+++.|...++.+++....+.+..+++++++.+.+.+.+
T Consensus 143 ---~~~~~-------~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (394)
T cd03794 143 ---GLLKN-------GSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPP 206 (394)
T ss_pred ---cCccc-------cchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCcc
Confidence 00000 11122344555666778999999999999999983222235678889999877665544
No 33
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.76 E-value=0.00046 Score=63.36 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=35.4
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 219 ~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
....+.++++|+|+++.+++.+.. ..+..|+++|+|.+.|.+.
T Consensus 133 ~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~ 176 (365)
T cd03825 133 ADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPR 176 (365)
T ss_pred ccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCC
Confidence 467899999999999999998742 3578999999999887543
No 34
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.73 E-value=0.0015 Score=58.43 Aligned_cols=176 Identities=14% Similarity=0.088 Sum_probs=92.2
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||.++.+. .||+|+.+...+++|.+. |++|.+++...+.. . .. ...+.+. ..++... ..
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~-~-~~----~~~~~~~------~~~~~~~----~~ 59 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAA--GYEVHVVAPPGDEL-E-EL----EALGVKV------IPIPLDR----RG 59 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhc--CCeeEEEecCCCcc-c-cc----ccCCceE------Eeccccc----cc
Confidence 47788877 589999999999999887 89998888664211 1 00 1111111 1111000 00
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc-eecc--cCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARI--FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p-v~~~--~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
...+ +.+....-..+.+...+||+++.....+.... +... ...+++..+|-.... ..
T Consensus 60 ~~~~----~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~--- 119 (359)
T cd03808 60 INPF----KDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV-------------FT--- 119 (359)
T ss_pred cChH----hHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh-------------hc---
Confidence 0001 11111222234456678997765432221111 1112 334444444433200 00
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEc--CCCCCCcccCCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--PPCDTSGLQACN 262 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvY--PPVd~~~f~~~~ 262 (282)
.+ ..+...+..++.+..+.+|.++++|...++.+++.+..+.+..+++ +++|.+.+...+
T Consensus 120 ---~~-------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T cd03808 120 ---SG-------GLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSP 181 (359)
T ss_pred ---cc-------hhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccc
Confidence 00 0133445556667777889999999999999999886311234444 445776665554
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.69 E-value=0.00063 Score=62.18 Aligned_cols=165 Identities=13% Similarity=0.070 Sum_probs=97.5
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
||+++.+... +|+|+.++..+++|.+. |++|.++|........ . .... ..... .. .
T Consensus 1 ki~~~~~~~~--~~~~~~~~~~~~~L~~~--g~~v~v~~~~~~~~~~-~----~~~~-~~~~~-----~~---~------ 56 (355)
T cd03799 1 KIAYLVKEFP--RLSETFILREILALEAA--GHEVEIFSLRPPEDTL-V----HPED-RAELA-----RT---R------ 56 (355)
T ss_pred CEEEECCCCC--CcchHHHHHHHHHHHhC--CCeEEEEEecCccccc-c----cccc-ccccc-----ch---H------
Confidence 5899999984 55999999999999998 9999998866421110 0 0000 00000 00 0
Q ss_pred CCchhhhhHHHHHHH---HHHHHHhcCCCcEEEECCCCccccc--eec-ccCCeeEEEeecCCchhhhhhhhhhcccccc
Q 023456 116 YPRFTMIGQSFGSVY---LSWEALCKFTPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~---la~eal~~~~pDv~Ids~g~af~~p--v~~-~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~ 189 (282)
.....+..+. ...+.+...++|++....+...... ... ..+.+.+..+|-+... .
T Consensus 57 -----~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 117 (355)
T cd03799 57 -----YLARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIF--------------R 117 (355)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccc--------------c
Confidence 0011121122 2223345578998876543221111 111 2467888888876521 0
Q ss_pred cchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 190 ~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
. .. . ..+....+.+|.+++.|.+.++.+++.++. ..+..|+++++|.+.+...+
T Consensus 118 ~-----~~--~------------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~ 172 (355)
T cd03799 118 S-----PD--A------------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP 172 (355)
T ss_pred c-----Cc--h------------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc
Confidence 0 00 0 122333457999999999999999998653 35678999999988887654
No 36
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.68 E-value=0.00092 Score=62.72 Aligned_cols=176 Identities=13% Similarity=0.117 Sum_probs=92.5
Q ss_pred CcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeec
Q 023456 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (282)
Q Consensus 34 ~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~ 113 (282)
+.+|..+.+.++ .||+|+++.+.+++|.+. ++++.+.+... .+ .+.++... -+++ ++.+...
T Consensus 1 ~~~il~ii~~~~-~GG~e~~~~~l~~~l~~~--~~~~~v~~~~~-~~--~~~~~~~~-~~i~------~~~~~~~----- 62 (374)
T TIGR03088 1 RPLIVHVVYRFD-VGGLENGLVNLINHLPAD--RYRHAVVALTE-VS--AFRKRIQR-PDVA------FYALHKQ----- 62 (374)
T ss_pred CceEEEEeCCCC-CCcHHHHHHHHHhhcccc--ccceEEEEcCC-CC--hhHHHHHh-cCce------EEEeCCC-----
Confidence 357899999997 699999999999888876 66665555321 11 22222221 1222 2222110
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCcccccee-cccCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 114 ~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~-~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
....+. .+.-..+.+...+||++-.....++...++ +..+.+. .+|..- ..|. +..+
T Consensus 63 -~~~~~~-------~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~--~i~~~h-~~~~----------~~~~- 120 (374)
T TIGR03088 63 -PGKDVA-------VYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPA--RIHGEH-GRDV----------FDLD- 120 (374)
T ss_pred -CCCChH-------HHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCe--EEEeec-Cccc----------ccch-
Confidence 001111 111122334556899876542221110111 2234443 244321 0000 0000
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
. +.+. +.++.++..+.+|.+++.|..+++.+++.++. ..+..|+|.+||++.|.+.+
T Consensus 121 ----~------~~~~---~~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~ 178 (374)
T TIGR03088 121 ----G------SNWK---YRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSR 178 (374)
T ss_pred ----h------hHHH---HHHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCc
Confidence 0 0011 11223344556899999999999999988873 23568999999998886553
No 37
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.65 E-value=0.0024 Score=62.05 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=31.3
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCc
Q 023456 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG 257 (282)
Q Consensus 220 ~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~ 257 (282)
+.++.+++.|+|+++.+++.|+ ..+..|+|.++|++.
T Consensus 189 ~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~~ 225 (405)
T PRK10125 189 ALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMAT 225 (405)
T ss_pred hcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCccc
Confidence 4678999999999999999887 245789999999754
No 38
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.62 E-value=0.00099 Score=62.13 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=38.7
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhCCC-CCceEEcCCCCCCcccCCC
Q 023456 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 214 l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~-r~~~VvYPPVd~~~f~~~~ 262 (282)
.+.+..+.+|.++++|++.++.+.+.+... .+..++++++|.+.|.+.+
T Consensus 156 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~ 205 (398)
T cd03800 156 AEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYG 205 (398)
T ss_pred HHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceeccc
Confidence 445566789999999999999999988742 2367999999988776544
No 39
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.59 E-value=0.00082 Score=63.85 Aligned_cols=47 Identities=21% Similarity=0.259 Sum_probs=37.5
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 215 ~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
+....+.+|.++++|+.+++.+.+.|+. +.+..+++.+||.+.|.+.
T Consensus 157 e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~ 204 (405)
T TIGR03449 157 EQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPG 204 (405)
T ss_pred HHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCC
Confidence 3445668999999999999999888874 2346799999999887654
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.58 E-value=0.0015 Score=59.85 Aligned_cols=167 Identities=14% Similarity=0.098 Sum_probs=92.1
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
+|.++++.++ .||+|+++.+.+++|.+. |++|.+++...+...+ ...... ....+.. ..
T Consensus 1 ~il~~~~~~~-~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~-~~~~~~-----------~~~~~~~----~~-- 59 (360)
T cd04951 1 KILYVITGLG-LGGAEKQVVDLADQFVAK--GHQVAIISLTGESEVK-PPIDAT-----------IILNLNM----SK-- 59 (360)
T ss_pred CeEEEecCCC-CCCHHHHHHHHHHhcccC--CceEEEEEEeCCCCcc-chhhcc-----------ceEEecc----cc--
Confidence 3778888886 699999999999999888 8888887754321110 000000 0001000 00
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCcccc-ceec-c-cCCeeEEEeecCCchhhhhhhhhhcccccccch
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY-PLAR-I-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~-pv~~-~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~ 192 (282)
..... +..+....+.+....||++.....++... .+++ . .+.+.+..+|....
T Consensus 60 -~~~~~----~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 60 -NPLSF----LLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred -cchhh----HHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 00111 11222223445667899777653222111 1111 1 35677777775430
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 193 ~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
.+..+ .+.+.+....+|.+++.|....+.+.+.... .++..++++++|++.|.+.
T Consensus 116 -------~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~ 171 (360)
T cd04951 116 -------GGRLR-------MLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKD 171 (360)
T ss_pred -------hhHHH-------HHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcc
Confidence 00111 1223334445788888999999998887542 3567888889998877554
No 41
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.41 E-value=0.0029 Score=59.36 Aligned_cols=179 Identities=15% Similarity=0.197 Sum_probs=95.9
Q ss_pred cEEEEEccCCC-C-CCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceee
Q 023456 35 TSVAFFHPNTN-D-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (282)
Q Consensus 35 ~~VafvHp~l~-~-~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~ 112 (282)
|+|++++++.- . .||+|+.+.+.+++|.+.+ +++|+ |.... . . ..-++++. ..+ .+
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~~-~v~v~--~~~~~--~--~-----~~~~~~~~------~~~--~~-- 58 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARLM-DVDVR--CFGDQ--R--F-----DSEGLTVK------GYR--PW-- 58 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHhc-CeeEE--cCCCc--h--h-----cCCCeEEE------Eec--Ch--
Confidence 68999988775 2 5999999999999998862 56644 43211 0 0 00111211 000 00
Q ss_pred cccCCchhhhhHHHHHHHHHH-HHHhcCCCcEEEECCCCcccccee--cccCCeeEEEeecCCchhhhhhhhhhcccccc
Q 023456 113 ESTYPRFTMIGQSFGSVYLSW-EALCKFTPLYYFDTSGYAFTYPLA--RIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (282)
Q Consensus 113 ~~~~p~~tl~~q~l~~~~la~-eal~~~~pDv~Ids~g~af~~pv~--~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~ 189 (282)
.......+.+..+...+ ......++|++-.....+...+.+ +..+.|++...|.... .+ .|.
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-----~~------~~~ 123 (388)
T TIGR02149 59 ----SELKEANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEP-----LR------PWK 123 (388)
T ss_pred ----hhccchhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeecccc-----cc------ccc
Confidence 00111111121111111 122334689776543222111111 2368899998995320 00 011
Q ss_pred cchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHh-CC-CCCceEEcCCCCCCcccCC
Q 023456 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 190 ~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~-~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
.. .. . .. +.++.+++....+.+|.++++|+++++.+++.| +. ..+..|+++++|.+.+.+.
T Consensus 124 ~~-~~--~-------~~-~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~ 186 (388)
T TIGR02149 124 EE-QL--G-------GG-YKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD 186 (388)
T ss_pred cc-cc--c-------cc-hhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC
Confidence 00 00 0 00 123445566667889999999999999999988 32 2456799999998877653
No 42
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=97.18 E-value=0.0041 Score=58.32 Aligned_cols=158 Identities=11% Similarity=0.089 Sum_probs=81.3
Q ss_pred CCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhhhHH
Q 023456 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125 (282)
Q Consensus 46 ~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~~q~ 125 (282)
+.||+|++..+.+++|++. |++|.+.|...+.. . +..++ .+.+. ..+............++....+.
T Consensus 10 g~gG~~~~~~~la~~L~~~--g~ev~vv~~~~~~~-~---~~~~~-~g~~~------~~~~~~~~~~~~~~~~l~~~~~~ 76 (357)
T PRK00726 10 GTGGHVFPALALAEELKKR--GWEVLYLGTARGME-A---RLVPK-AGIEF------HFIPSGGLRRKGSLANLKAPFKL 76 (357)
T ss_pred cchHhhhHHHHHHHHHHhC--CCEEEEEECCCchh-h---hcccc-CCCcE------EEEeccCcCCCChHHHHHHHHHH
Confidence 3589999999999999998 89998877643211 1 11111 12221 11110000000000111112222
Q ss_pred HHHHHHHHHHHhcCCCcEEEECCCCccccc-e--ecccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhH
Q 023456 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (282)
Q Consensus 126 l~~~~la~eal~~~~pDv~Ids~g~af~~p-v--~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~ 202 (282)
+..+....+.+...+||+++.....+ +.+ . .+..+.|++.++|... . . .
T Consensus 77 ~~~~~~~~~~ik~~~pDvv~~~~~~~-~~~~~~~~~~~~~p~v~~~~~~~----------------~-------~----~ 128 (357)
T PRK00726 77 LKGVLQARKILKRFKPDVVVGFGGYV-SGPGGLAARLLGIPLVIHEQNAV----------------P-------G----L 128 (357)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcc-hhHHHHHHHHcCCCEEEEcCCCC----------------c-------c----H
Confidence 33333333445667899999875333 222 1 1236788887665321 0 0 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccC
Q 023456 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQA 260 (282)
Q Consensus 203 ~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~ 260 (282)
. .++..+.+|.+++.|.-+ ..+ ...++..|+++|+|.+.+.+
T Consensus 129 ~-----------~r~~~~~~d~ii~~~~~~---~~~--~~~~~i~vi~n~v~~~~~~~ 170 (357)
T PRK00726 129 A-----------NKLLARFAKKVATAFPGA---FPE--FFKPKAVVTGNPVREEILAL 170 (357)
T ss_pred H-----------HHHHHHHhchheECchhh---hhc--cCCCCEEEECCCCChHhhcc
Confidence 1 112223578888888632 222 22467899999999876543
No 43
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.15 E-value=0.0055 Score=56.80 Aligned_cols=159 Identities=14% Similarity=0.148 Sum_probs=81.9
Q ss_pred CCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhhhH
Q 023456 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (282)
Q Consensus 45 ~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~~q 124 (282)
++.||.|+++...+++|++. |++|.+.|...... .+. .. .-+.++ ..++.........+.++.-...
T Consensus 7 ~~~gG~~~~~~~la~~l~~~--G~ev~v~~~~~~~~-~~~---~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd03785 7 GGTGGHIFPALALAEELRER--GAEVLFLGTKRGLE-ARL---VP-KAGIPL------HTIPVGGLRRKGSLKKLKAPFK 73 (350)
T ss_pred cCchhhhhHHHHHHHHHHhC--CCEEEEEECCCcch-hhc---cc-ccCCce------EEEEecCcCCCChHHHHHHHHH
Confidence 45689999999999999999 89998887653211 111 10 011111 1111100000000011111111
Q ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCcccccee---cccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhh
Q 023456 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (282)
Q Consensus 125 ~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s 201 (282)
.+..+....+.+.+.+||+++.+.+.+ +.+.. +..+.|++.|.|... . .
T Consensus 74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~----------------~-------~---- 125 (350)
T cd03785 74 LLKGVLQARKILKKFKPDVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAV----------------P-------G---- 125 (350)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCC----------------c-------c----
Confidence 111111222335566899888764332 22221 236788876655321 0 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccC
Q 023456 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQA 260 (282)
Q Consensus 202 ~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~ 260 (282)
.. ..+..+.+|.+++.|...++. +. +.+..++++|+|.+.+.+
T Consensus 126 ~~-----------~~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~ 168 (350)
T cd03785 126 LA-----------NRLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILAL 168 (350)
T ss_pred HH-----------HHHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhh
Confidence 00 112223589999999988776 22 267789999999876643
No 44
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.05 E-value=0.007 Score=55.96 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=62.0
Q ss_pred HhcCCCcEEEECCCCcccccee---cccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHH
Q 023456 136 LCKFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (282)
Q Consensus 136 l~~~~pDv~Ids~g~af~~pv~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~ 212 (282)
+...+||++....+.. +.++. +..+.|++.+.|.-+.... .. ..... + ++.+.
T Consensus 78 ~~~~~~dvvh~~~~~~-~~~~~~~~~~~~~p~i~~~h~~~~~~~------------~~--~~~~~------~---~~~~~ 133 (367)
T cd05844 78 LRRHRPDLVHAHFGFD-GVYALPLARRLGVPLVVTFHGFDATTS------------LA--LLLRS------R---WALYA 133 (367)
T ss_pred HHhhCCCEEEeccCch-HHHHHHHHHHcCCCEEEEEeCcccccc------------ch--hhccc------c---hhHHH
Confidence 4556899887754322 22322 3368999999996442100 00 00000 0 22233
Q ss_pred HHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 213 ~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
..+....+.+|.++++|.++++.+++....+.+..|+++++|.+.|.+.
T Consensus 134 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~ 182 (367)
T cd05844 134 RRRRRLARRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPA 182 (367)
T ss_pred HHHHHHHHhcCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCC
Confidence 3445556789999999999999998863212346788889998887654
No 45
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.97 E-value=0.018 Score=55.74 Aligned_cols=42 Identities=17% Similarity=0.314 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcC
Q 023456 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP 251 (282)
Q Consensus 209 ~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYP 251 (282)
+++.+++.+..+.+|.++++|..+++.+.+ ++. +.+..|+|-
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~N 190 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYD 190 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCC
Confidence 455566777788999999999999999988 553 355677764
No 46
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.51 E-value=0.05 Score=51.25 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=31.0
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~ 76 (282)
||+++=+... +||.|+++.+.++.|.+. |+++.+++..
T Consensus 1 ki~~~~~~~~-~GGv~~~~~~l~~~l~~~--g~~v~~~~~~ 38 (372)
T cd03792 1 KVLHVNSTPY-GGGVAEILHSLVPLMRDL--GVDTRWEVIK 38 (372)
T ss_pred CeEEEeCCCC-CCcHHHHHHHHHHHHHHc--CCCceEEecC
Confidence 4777766664 699999999999999998 8888887754
No 47
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.27 E-value=0.11 Score=50.61 Aligned_cols=190 Identities=14% Similarity=0.043 Sum_probs=88.7
Q ss_pred CCchhHHHHHHHHHHHHhCCCC--cEEEEcCcCCCC--hhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhh
Q 023456 47 GGGGERVLWCAVKAIQEESPDL--DCIVYTGDHDAF--PDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMI 122 (282)
Q Consensus 47 ~GGgErVl~~a~~aL~~~~p~~--~v~IYT~~~~~~--~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~ 122 (282)
.||+|+.+.+.+++|.+. |+ +|.++|...... .++...+.+ +....++.+++.. .+..+.....+
T Consensus 25 ~GG~~~~v~~La~~L~~~--G~~~~V~v~t~~~~~~~~~~~~~~~~~-----~~~~gv~v~r~~~----~~~~~~~~~~~ 93 (439)
T TIGR02472 25 TGGQTKYVLELARALARR--SEVEQVDLVTRLIKDAKVSPDYAQPIE-----RIAPGARIVRLPF----GPRRYLRKELL 93 (439)
T ss_pred CCCcchHHHHHHHHHHhC--CCCcEEEEEeccccCcCCCCccCCCee-----EeCCCcEEEEecC----CCCCCcChhhh
Confidence 599999999999999998 76 888989653210 011100011 1111112222211 01111111111
Q ss_pred hHHHHHHHHHH-HHHhc--CCCcEEEECCCCccccc--eecccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhcc
Q 023456 123 GQSFGSVYLSW-EALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (282)
Q Consensus 123 ~q~l~~~~la~-eal~~--~~pDv~Ids~g~af~~p--v~~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~ 197 (282)
...+..+...+ +.+.+ ..|||+-.....+.... +.+..+.|++...|...... .+ .+......
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~---~~------~~~~~~~~--- 161 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREK---RR------RLLAAGLK--- 161 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchh---hh------hcccCCCC---
Confidence 11222222222 22332 25998876532210111 11236789999999643110 00 00000000
Q ss_pred chhhHHHHHHHHH-HHHHHHHhcCCCcEEEEcCHHHHHH-HHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 198 NWLSQCKIVYYTF-FSWMYGLVGSCADLAMVNSSWTQSH-IEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 198 ~~~s~~k~~Y~~~-~~~l~~~~~~~~D~vlvNSs~T~~~-Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
...++..|... ....+.+..+.+|.++++|+-.... ..+..+. +.+..|||+-||++.|.+.
T Consensus 162 --~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~ 226 (439)
T TIGR02472 162 --PQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPP 226 (439)
T ss_pred --hhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCC
Confidence 00112222111 0113556777899999998654332 2222232 3567899999999988764
No 48
>PLN02275 transferase, transferring glycosyl groups
Probab=96.17 E-value=0.19 Score=47.83 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 209 ~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
+++.+++.+..+.+|.++++|+..++++.+.++ .+..|+|.. +.+.|.+.
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g--~~i~vi~n~-~~~~f~~~ 202 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQNWG--IRATVLYDQ-PPEFFRPA 202 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcC--CCeEEECCC-CHHHcCcC
Confidence 455566777778899999999999999998888 556677655 45556543
No 49
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=95.85 E-value=0.11 Score=48.16 Aligned_cols=30 Identities=7% Similarity=0.103 Sum_probs=23.2
Q ss_pred CCCCchhHHHHHHHHHHHHhCCCCcEEEEcCc
Q 023456 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (282)
Q Consensus 45 ~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~ 76 (282)
++-||.+....+.+++|.+. |++|.++|..
T Consensus 8 g~~~g~~~~~~~La~~L~~~--g~eV~vv~~~ 37 (348)
T TIGR01133 8 GGTGGHIFPALAVAEELIKR--GVEVLWLGTK 37 (348)
T ss_pred CccHHHHhHHHHHHHHHHhC--CCEEEEEeCC
Confidence 44577777666888999998 8999888754
No 50
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=95.81 E-value=0.42 Score=42.01 Aligned_cols=161 Identities=17% Similarity=0.154 Sum_probs=85.2
Q ss_pred EEEEEccC--CCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeec
Q 023456 36 SVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (282)
Q Consensus 36 ~VafvHp~--l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~ 113 (282)
+||++=-- =+.+||=|..+++.+.-+++. +.++.+|....+.+ .. ..+.-|.++. .+. .
T Consensus 3 kIaIiGtrGIPa~YGGfET~ve~L~~~l~~~--g~~v~Vyc~~~~~~-~~----~~~y~gv~l~------~i~------~ 63 (185)
T PF09314_consen 3 KIAIIGTRGIPARYGGFETFVEELAPRLVSK--GIDVTVYCRSDYYP-YK----EFEYNGVRLV------YIP------A 63 (185)
T ss_pred eEEEEeCCCCCcccCcHHHHHHHHHHHHhcC--CceEEEEEccCCCC-CC----CcccCCeEEE------EeC------C
Confidence 45555332 235899999999988888877 89999987654321 11 0111122221 111 0
Q ss_pred ccCC-chhhhhHHHHHHHHHHHHHh--cCCCcEEE-ECCC-Cccccceecc---cCCeeEEEeecCCchhhhhhhhhhcc
Q 023456 114 STYP-RFTMIGQSFGSVYLSWEALC--KFTPLYYF-DTSG-YAFTYPLARI---FGCRVICYTHYPTISLDMISRVREGS 185 (282)
Q Consensus 114 ~~~p-~~tl~~q~l~~~~la~eal~--~~~pDv~I-ds~g-~af~~pv~~~---~~~~~i~Y~HyP~is~dml~~v~~~~ 185 (282)
...+ .-++..- +.++.-|+.... ....|++. =-.+ -+|..|+++. .|.+++.=+|-+. |+|
T Consensus 64 ~~~g~~~si~yd-~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---------WkR- 132 (185)
T PF09314_consen 64 PKNGSAESIIYD-FLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---------WKR- 132 (185)
T ss_pred CCCCchHHHHHH-HHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---------hhh-
Confidence 1111 1111111 112323332112 12466443 2222 2456666654 3557766555544 322
Q ss_pred cccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhC
Q 023456 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWG 241 (282)
Q Consensus 186 ~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~ 241 (282)
..|. ..+| +.+..-+.++.+.+|.+++-|.=.++++++-|+
T Consensus 133 ~KW~-----------~~~k----~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 133 AKWG-----------RPAK----KYLKFSEKLAVKYADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred hhcC-----------HHHH----HHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC
Confidence 1222 1222 233344667778999999999999999999998
No 51
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.19 E-value=0.83 Score=44.54 Aligned_cols=47 Identities=13% Similarity=-0.016 Sum_probs=34.8
Q ss_pred HHhcCCCcEEEEcCHHHHHHHHH---------HhCC-CCCceEEcCCCCCCcccCCC
Q 023456 216 GLVGSCADLAMVNSSWTQSHIEK---------LWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 216 ~~~~~~~D~vlvNSs~T~~~Ik~---------~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
......+|.+++.|...++.+.+ .++. ..+..+|+..||++.|.+..
T Consensus 205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 33455799999999999988864 2221 24678999999999887653
No 52
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.17 E-value=0.36 Score=46.02 Aligned_cols=53 Identities=13% Similarity=-0.019 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 210 ~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
.+..+++...+.+|.+++.|..+++.+++.++. +.+..|++..||++.|.+.+
T Consensus 161 ~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~ 214 (397)
T TIGR03087 161 LLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDR 214 (397)
T ss_pred HHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCc
Confidence 455677788899999999999999999988753 34577898899999886653
No 53
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=94.76 E-value=0.25 Score=46.06 Aligned_cols=99 Identities=15% Similarity=0.048 Sum_probs=61.1
Q ss_pred CCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHHHHHHH
Q 023456 139 FTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (282)
Q Consensus 139 ~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~ 217 (282)
..+|++|.+.......++... ...+.+.++|...... ... ...+..+..|...+..
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------~~~------~~~~~~~~~~~~~~~~---- 154 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSD-------------NND------PVHSLINNFYEYVFEN---- 154 (372)
T ss_pred CCCCEEEECCccccchhHHhccCCceEEEEEChHHhCC-------------ccc------ccccccchhhHHHHhC----
Confidence 679977765544434334444 5677889999765210 000 0011233344333322
Q ss_pred hcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 218 ~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
.+++|.+++.|..+++.+++.++...+..++.++++.+.+.+.
T Consensus 155 -~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~ 197 (372)
T cd04949 155 -LDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPA 197 (372)
T ss_pred -hhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhccc
Confidence 3579999999999999999999832235677778888776654
No 54
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=94.57 E-value=1.2 Score=45.66 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=34.5
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 219 ~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
...+| +++||.-+++.+.+.++. +.+..|||..+|++.|.+.
T Consensus 337 ~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~ 379 (578)
T PRK15490 337 VPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPS 379 (578)
T ss_pred Eecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCcc
Confidence 55677 889999999999999874 2357899999999887664
No 55
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=93.57 E-value=0.3 Score=40.92 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=28.8
Q ss_pred EEEEccCCCC-CCchhHHHHHHHHHHHHhCCCCcEEEEc
Q 023456 37 VAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYT 74 (282)
Q Consensus 37 VafvHp~l~~-~GGgErVl~~a~~aL~~~~p~~~v~IYT 74 (282)
|++++++... .||++++.+..+++|.+. |++|.+++
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~v~~ 37 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARR--GHEVEVVA 37 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHc--CCeEEEEE
Confidence 3556666654 799999999999999997 88877766
No 56
>PRK00654 glgA glycogen synthase; Provisional
Probab=92.05 E-value=6.6 Score=38.61 Aligned_cols=41 Identities=22% Similarity=0.176 Sum_probs=32.5
Q ss_pred cEEEEEc----cCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCC
Q 023456 35 TSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (282)
Q Consensus 35 ~~VafvH----p~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~ 78 (282)
|+|+++- |+.. .||-+.|+.+..++|++. |++|.++|..++
T Consensus 1 m~i~~vs~e~~P~~k-~GGl~~~v~~L~~~L~~~--G~~V~v~~p~y~ 45 (466)
T PRK00654 1 MKILFVASECAPLIK-TGGLGDVVGALPKALAAL--GHDVRVLLPGYP 45 (466)
T ss_pred CeEEEEEcccccCcc-cCcHHHHHHHHHHHHHHC--CCcEEEEecCCc
Confidence 4566654 4443 699999999999999999 999999897654
No 57
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=91.97 E-value=1.3 Score=38.48 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=23.4
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcC
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~ 75 (282)
|+|-++=|+. ||+-|-.. +.|.+.. ++++.++|.
T Consensus 1 M~ILlle~y~---ggSHk~~~---~~L~~~~-~~~~~lltL 34 (168)
T PF12038_consen 1 MRILLLEPYY---GGSHKQWA---DGLAAHS-EHEWTLLTL 34 (168)
T ss_pred CeEEEEcccc---ccCHHHHH---HHHHHhc-cCCEEEEEc
Confidence 5777888876 67777765 4566655 677777774
No 58
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=91.26 E-value=2.2 Score=40.75 Aligned_cols=40 Identities=15% Similarity=-0.012 Sum_probs=32.6
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 221 ~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
.+|.++++|.|+++.+++.+. ..+..|++.++|++.|.+.
T Consensus 139 ~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~ 178 (380)
T PRK15484 139 KNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSN 178 (380)
T ss_pred cCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCc
Confidence 468999999999999988765 2357899999998877653
No 59
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=90.95 E-value=4.3 Score=39.26 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=32.9
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcC
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~ 77 (282)
|+||++=+..- +=+|=.+..=+.+|.++ |++|.+|+...
T Consensus 1 m~ia~~~~~~P--~~setFi~~ei~~l~~~--G~~v~~~s~~~ 39 (406)
T PRK15427 1 MKVGFFLLKFP--LSSETFVLNQITAFIDM--GFEVEIVALQK 39 (406)
T ss_pred CeEEEEeccCC--ccchhhHHHHHHHHHHc--CceEEEEEccC
Confidence 68999877775 66899999988899998 99999998753
No 60
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=89.34 E-value=15 Score=36.08 Aligned_cols=41 Identities=24% Similarity=0.195 Sum_probs=32.5
Q ss_pred cEEEEEc----cCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCC
Q 023456 35 TSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (282)
Q Consensus 35 ~~VafvH----p~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~ 78 (282)
|+|.++- |+.- .||-..|+-+..+||+++ |++|.+.|..++
T Consensus 1 m~i~~vs~E~~P~~k-~GGl~~~v~~L~~aL~~~--G~~v~v~~p~y~ 45 (473)
T TIGR02095 1 MRVLFVAAEMAPFAK-TGGLADVVGALPKALAAL--GHDVRVLLPAYG 45 (473)
T ss_pred CeEEEEEeccccccC-cCcHHHHHHHHHHHHHHc--CCeEEEEecCCc
Confidence 4566654 4443 699999999999999999 999989888765
No 61
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=88.83 E-value=1.8 Score=40.84 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=23.9
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCC
Q 023456 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCD 254 (282)
Q Consensus 219 ~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd 254 (282)
-+++|.+++.|..+++.+.+ +|. +.+..++.-|++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~-~gi~~~ki~v~G~p~~ 180 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD-IGVPPEQVVETGIPIR 180 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH-cCCChhHEEEECcccC
Confidence 45799999999999999887 452 123444434664
No 62
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=88.44 E-value=13 Score=35.78 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=28.4
Q ss_pred HHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCc
Q 023456 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG 257 (282)
Q Consensus 213 ~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~ 257 (282)
++.++..+.+|.+++.|+.+++++++. |.+.+ ..+.|..+.+.
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~~-g~~~~-i~vi~n~~~d~ 212 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLAL-GAKNE-VTVTGNLKFDI 212 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHc-CCCCC-cEecccccccC
Confidence 334445557899999999999999884 53233 34555554443
No 63
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=85.02 E-value=4.9 Score=34.87 Aligned_cols=102 Identities=17% Similarity=0.231 Sum_probs=64.9
Q ss_pred CCCcEEEECCCCccccceecc-cCCeeEEEeec---CCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHHHH
Q 023456 139 FTPLYYFDTSGYAFTYPLARI-FGCRVICYTHY---PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (282)
Q Consensus 139 ~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~Hy---P~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l 214 (282)
..||||+-.+|+.-+..+.-. +++++++||=+ |. ..| ..| |+....+ ....++ .++-...
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~-g~d---------~~F--Dpe~p~~-~~~~~~---~r~rN~~ 128 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS-GAD---------VGF--DPEFPPS-LDDRAR---LRMRNAH 128 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC-CCc---------CCC--CCCCCCC-HHHHHH---HHHHhHH
Confidence 448999998888766665544 89999999987 43 111 111 1211111 011111 1111111
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcc
Q 023456 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (282)
Q Consensus 215 ~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f 258 (282)
--..-..+|..++=+.|=++.+=..|+ .+.+|++==|||+.+
T Consensus 129 ~l~~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 129 NLLALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 112233599999999999999999999 889999999998764
No 64
>PHA01630 putative group 1 glycosyl transferase
Probab=84.94 E-value=1.9 Score=40.91 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=34.9
Q ss_pred cCCCcEEEEcCHHHHHHHHHHh-CCCCCceEEcCCCCCCcccCCC
Q 023456 219 GSCADLAMVNSSWTQSHIEKLW-GIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 219 ~~~~D~vlvNSs~T~~~Ik~~~-~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
.+.+|.++++|+++++.+++.. +.+.+..|++.+||++.|.+.+
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~ 136 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKP 136 (331)
T ss_pred hccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCc
Confidence 5689999999999999998763 2124678999999998886554
No 65
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=84.71 E-value=7.8 Score=35.40 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=61.1
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhcccccee-ecCCCeEEEccccceee-
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE-LLHPPKVVHLYRRKWIE- 112 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~-l~~~~~fv~l~~~~~l~- 112 (282)
|||+|.....| .|=.-|.+ ..+++| + |++|.+.+... .. +++ ++.|... ++ .+.++. ....+-.
T Consensus 1 MkIl~~v~~~G-~GH~~R~~-~la~~L--r--g~~v~~~~~~~--~~-~~~---~~~~~~~~~~-~~~~~~-~~~~~~~~ 66 (318)
T PF13528_consen 1 MKILFYVQGHG-LGHASRCL-ALARAL--R--GHEVTFITSGP--AP-EFL---KPRFPVREIP-GLGPIQ-ENGRLDRW 66 (318)
T ss_pred CEEEEEeCCCC-cCHHHHHH-HHHHHH--c--cCceEEEEcCC--cH-HHh---ccccCEEEcc-CceEec-cCCccchH
Confidence 68888877764 68888987 577777 3 68888877653 12 332 2223221 21 112221 1000000
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCC
Q 023456 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPT 172 (282)
Q Consensus 113 ~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~ 172 (282)
.+.........+....+..-.+.+....||+||+.. ++++.-..+..+.|.++-.|.-.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~ 125 (318)
T PF13528_consen 67 KTVRNNIRWLARLARRIRREIRWLREFRPDLVISDF-YPLAALAARRAGIPVIVISNQYW 125 (318)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHH
Confidence 000000000000011222223446777899777663 44443344558999999988765
No 66
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=83.15 E-value=8.7 Score=33.10 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=26.1
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCcEEEECCCCcccccee
Q 023456 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA 157 (282)
Q Consensus 120 tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~ 157 (282)
+-....+.++..++..+.+..||++|.| |-+.+.|+.
T Consensus 72 ~~~~~~l~~~~~~~~il~r~rPdvii~n-Gpg~~vp~~ 108 (170)
T PF08660_consen 72 TSIFTTLRAFLQSLRILRRERPDVIISN-GPGTCVPVC 108 (170)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEc-CCceeeHHH
Confidence 3344444455566666777789999998 888888864
No 67
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=82.57 E-value=17 Score=35.98 Aligned_cols=44 Identities=16% Similarity=0.140 Sum_probs=36.6
Q ss_pred cEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCC
Q 023456 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (282)
Q Consensus 35 ~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~ 78 (282)
|+|.+.=-+-..--|-|-+|..++++|.+..|++++.+.|...+
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~ 44 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPV 44 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCcc
Confidence 46666666666668999999999999999999999999887654
No 68
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=81.16 E-value=32 Score=37.99 Aligned_cols=48 Identities=10% Similarity=0.054 Sum_probs=39.1
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhCC-----------------------CCCceEEcCCCCCCcccCC
Q 023456 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 214 l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-----------------------~r~~~VvYPPVd~~~f~~~ 261 (282)
.++++...+|.|+++|.--++...+.|+. ..+..||.|=||++.|.+.
T Consensus 374 ~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~ 444 (1050)
T TIGR02468 374 AEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPH 444 (1050)
T ss_pred HHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCC
Confidence 57788899999999999888877777741 0166899999999999875
No 69
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=80.23 E-value=2.5 Score=41.69 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCCC
Q 023456 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 202 ~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
..+..+.+.+..+.+.+-+.+|.+++.|..+++..++ ++. +.+..|++.++|++.|.+.+
T Consensus 225 ~~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 225 YFRRLWIRFFESLGRLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcc
Confidence 3555666677777777888999999999999987655 442 23568999999999887765
No 70
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=79.50 E-value=6.2 Score=38.04 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHHHHHhcCCCcEEEECCCCccccc--ee---cccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhc
Q 023456 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (282)
Q Consensus 122 ~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~p--v~---~~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~ 196 (282)
++..+..+..+.+.+...+||++|-. |+ .+.| +. +..+.|++-|+ .|. +|. |..
T Consensus 71 ~~~~~~~~~~~~~~l~~~kPd~vi~~-g~-~~~~~~~a~aa~~~gip~v~~i-~P~--------~wa----w~~------ 129 (385)
T TIGR00215 71 LGRLLKIRKEVVQLAKQAKPDLLVGI-DA-PDFNLTKELKKKDPGIKIIYYI-SPQ--------VWA----WRK------ 129 (385)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEe-CC-CCccHHHHHHHhhCCCCEEEEe-CCc--------Hhh----cCc------
Confidence 33334444456666778899977765 33 2344 42 23789999888 776 221 221
Q ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC
Q 023456 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC 253 (282)
Q Consensus 197 ~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPV 253 (282)
. ..|. .++.+|.+++.+.++++.+++ ++ .++.++-.|+
T Consensus 130 ~----~~r~------------l~~~~d~v~~~~~~e~~~~~~-~g--~~~~~vGnPv 167 (385)
T TIGR00215 130 W----RAKK------------IEKATDFLLAILPFEKAFYQK-KN--VPCRFVGHPL 167 (385)
T ss_pred c----hHHH------------HHHHHhHhhccCCCcHHHHHh-cC--CCEEEECCch
Confidence 0 0111 233589999999999888775 45 5677787887
No 71
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=78.14 E-value=63 Score=34.63 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=30.8
Q ss_pred HHHhcCCCcEEEEcCHHH----HHHHH-----------HHhCC-------CCCceEEcCCCCCCcccCCC
Q 023456 215 YGLVGSCADLAMVNSSWT----QSHIE-----------KLWGI-------PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 215 ~~~~~~~~D~vlvNSs~T----~~~Ik-----------~~~~~-------~r~~~VvYPPVd~~~f~~~~ 262 (282)
+..+.+.+|.|+++|.-- .+.+. .+|+. +.+..||+|-+|++.|.+..
T Consensus 446 e~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~ 515 (784)
T TIGR02470 446 DLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYS 515 (784)
T ss_pred HHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCC
Confidence 446788999999999521 12222 23321 13457999999999887654
No 72
>PLN02316 synthase/transferase
Probab=77.53 E-value=1.2e+02 Score=33.59 Aligned_cols=182 Identities=15% Similarity=0.095 Sum_probs=98.5
Q ss_pred CCcEEEEEc----cCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhc--ccc--ce--------ee
Q 023456 33 RTTSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRF--GV--------EL 96 (282)
Q Consensus 33 ~~~~VafvH----p~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~--~~f--~~--------~l 96 (282)
..|+|+++- |+.- .||---|+....+||+++ |++|.|+|..++.-...-..... ..+ +. .+
T Consensus 586 ~pM~Il~VSsE~~P~aK-vGGLgDVV~sLp~ALa~~--Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 662 (1036)
T PLN02316 586 PPMHIVHIAVEMAPIAK-VGGLGDVVTSLSRAVQDL--NHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKV 662 (1036)
T ss_pred CCcEEEEEEcccCCCCC-cCcHHHHHHHHHHHHHHc--CCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEE
Confidence 458999886 4543 588888999999999999 99999999877521110000111 011 11 11
Q ss_pred cCCCeEEEcccc-ceeec-ccC------CchhhhhHHHHHHHHHHHHHhc--CCCcEEEECCCCcccccee-c-------
Q 023456 97 LHPPKVVHLYRR-KWIEE-STY------PRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYPLA-R------- 158 (282)
Q Consensus 97 ~~~~~fv~l~~~-~~l~~-~~~------p~~tl~~q~l~~~~la~eal~~--~~pDv~Ids~g~af~~pv~-~------- 158 (282)
+ .+....+... .+..+ ..| .||..++++. ++.+.. ..|||+--..-++...|.+ +
T Consensus 663 ~-GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aa------le~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~ 735 (1036)
T PLN02316 663 E-GLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAA------LEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYG 735 (1036)
T ss_pred C-CcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHH------HHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhc
Confidence 1 1112222210 01110 112 1333343332 232322 4699876532122112222 1
Q ss_pred ccCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHH
Q 023456 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK 238 (282)
Q Consensus 159 ~~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~ 238 (282)
..+.|++.=+|.... . ...+| .....+|.|++.|...++.|.+
T Consensus 736 ~~~~p~V~TiHnl~~---------------~----------~n~lk------------~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 736 LSKARVVFTIHNLEF---------------G----------ANHIG------------KAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred cCCCCEEEEeCCccc---------------c----------hhHHH------------HHHHHCCEEEeCCHHHHHHHHh
Confidence 134678888886541 0 00111 1224699999999999999987
Q ss_pred HhCC---CCCceEEcCCCCCCcccCC
Q 023456 239 LWGI---PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 239 ~~~~---~r~~~VvYPPVd~~~f~~~ 261 (282)
.+.. ..+..+|+.-||++.|.+.
T Consensus 779 ~~~l~~~~~Kl~vI~NGID~~~w~P~ 804 (1036)
T PLN02316 779 NSAIAPHLYKFHGILNGIDPDIWDPY 804 (1036)
T ss_pred ccCcccccCCEEEEECCccccccCCc
Confidence 6532 2467899999999887654
No 73
>PHA01633 putative glycosyl transferase group 1
Probab=73.67 E-value=4.8 Score=38.51 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=30.5
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCC
Q 023456 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 221 ~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~ 262 (282)
+-+.+++||++|++++++. |.+.+ .++++.+|++.|.+.+
T Consensus 92 ~~~~vIavS~~t~~~L~~~-G~~~~-i~I~~GVD~~~f~p~~ 131 (335)
T PHA01633 92 QDVKFIPNSKFSAENLQEV-GLQVD-LPVFHGINFKIVENAE 131 (335)
T ss_pred cCCEEEeCCHHHHHHHHHh-CCCCc-eeeeCCCChhhcCccc
Confidence 3568899999999999986 42244 4678899998887643
No 74
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=73.08 E-value=15 Score=35.79 Aligned_cols=184 Identities=14% Similarity=0.169 Sum_probs=93.6
Q ss_pred hccCCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecC--CCeEEEc
Q 023456 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLH--PPKVVHL 105 (282)
Q Consensus 28 ~~~~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~--~~~fv~l 105 (282)
+.+..++..+++| ||..|-+-|.-..|. .|.+. |.+|-+---..+...+++++ --++++.+ +..|.
T Consensus 7 ~~~~~k~ra~vvV---LGDvGRSPRMqYHA~-Sla~~--gf~VdliGy~~s~p~e~l~~----hprI~ih~m~~l~~~-- 74 (444)
T KOG2941|consen 7 ENKSKKKRAIVVV---LGDVGRSPRMQYHAL-SLAKL--GFQVDLIGYVESIPLEELLN----HPRIRIHGMPNLPFL-- 74 (444)
T ss_pred ccccccceEEEEE---ecccCCChHHHHHHH-HHHHc--CCeEEEEEecCCCChHHHhc----CCceEEEeCCCCccc--
Confidence 3344455555566 566677999987654 77777 66665522121123344432 11232211 11122
Q ss_pred cccceeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceec-------ccCCeeEEEeecCCchhhhh
Q 023456 106 YRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-------IFGCRVICYTHYPTISLDMI 178 (282)
Q Consensus 106 ~~~~~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~-------~~~~~~i~Y~HyP~is~dml 178 (282)
...++..+..+..+.|.+..+..-+. ..++|++.-+- +-+.|.+- +.+++-+-=-|-=.
T Consensus 75 ---~~~p~~~~l~lKvf~Qfl~Ll~aL~~---~~~~~~ilvQN--PP~iPtliv~~~~~~l~~~KfiIDWHNy~------ 140 (444)
T KOG2941|consen 75 ---QGGPRVLFLPLKVFWQFLSLLWALFV---LRPPDIILVQN--PPSIPTLIVCVLYSILTGAKFIIDWHNYG------ 140 (444)
T ss_pred ---CCCchhhhhHHHHHHHHHHHHHHHHh---ccCCcEEEEeC--CCCCchHHHHHHHHHHhcceEEEEehhhH------
Confidence 11222233345667776643333222 45788665543 33455431 13444443333222
Q ss_pred hhhhhcccccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEc--CC
Q 023456 179 SRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--PP 252 (282)
Q Consensus 179 ~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvY--PP 252 (282)
|-..-+........+=++..+++...|+.+|.=++=++--++-+.+.||.+ .+.|+| ||
T Consensus 141 --------------Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-ra~v~YDrPp 201 (444)
T KOG2941|consen 141 --------------YSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGIN-RAKVLYDRPP 201 (444)
T ss_pred --------------HHHHHHhhcCCCCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCCc-eeEEEecCCC
Confidence 210000000000112234556677889999999998999999999999932 577888 56
No 75
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=72.25 E-value=16 Score=34.61 Aligned_cols=46 Identities=17% Similarity=0.015 Sum_probs=36.9
Q ss_pred HHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCC
Q 023456 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 213 ~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~ 261 (282)
..+....+++|.+++.|...++++++. + .+..+++.-||.+.|.+.
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~ 190 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAA 190 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcc
Confidence 446666778999999999999988774 5 577888888998888654
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=66.69 E-value=17 Score=35.05 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=35.1
Q ss_pred hcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccCC
Q 023456 218 VGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQAC 261 (282)
Q Consensus 218 ~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYPPVd~~~f~~~ 261 (282)
+.+.+|.++++|+..++.+++.|+. ..+..|+|-+++.+.+...
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~ 224 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK 224 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC
Confidence 4567999999999999999999974 2345789999988766543
No 77
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=65.43 E-value=9.6 Score=39.32 Aligned_cols=51 Identities=16% Similarity=0.106 Sum_probs=42.3
Q ss_pred HHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCc-eEEcCCCCCCcccCCCCC
Q 023456 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRI-KRVYPPCDTSGLQACNPF 264 (282)
Q Consensus 212 ~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~-~VvYPPVd~~~f~~~~~~ 264 (282)
..++.+++..||.|++-|..|++.++.+|+ +++ .|++-=+|++.|.+.+.+
T Consensus 217 ~~iE~~aa~~Ad~fttVS~it~~E~~~Ll~--~~pd~ViPNGid~~~f~~~~e~ 268 (590)
T cd03793 217 YCIERAAAHCAHVFTTVSEITAYEAEHLLK--RKPDVVLPNGLNVKKFSALHEF 268 (590)
T ss_pred HHHHHHHHhhCCEEEECChHHHHHHHHHhC--CCCCEEeCCCcchhhcccchhh
Confidence 346888899999999999999999999999 554 367778899988777644
No 78
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=64.86 E-value=53 Score=32.59 Aligned_cols=41 Identities=32% Similarity=0.323 Sum_probs=27.1
Q ss_pred chhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccce
Q 023456 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGV 94 (282)
Q Consensus 49 GgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~ 94 (282)
|.=+.+.-.++++++.+|+..+++ |+... ...+ .+++.|+.
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilv-Tt~T~-Tg~e---~a~~~~~~ 100 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILV-TTMTP-TGAE---RAAALFGD 100 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EecCc-cHHH---HHHHHcCC
Confidence 455677788899999999999877 54433 3333 34455553
No 79
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=63.87 E-value=21 Score=34.71 Aligned_cols=91 Identities=14% Similarity=0.081 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhcC--CCcEEEECCCCcccccee--cccCCeeEEE-eecCCchhhhhhhhhhcccccccchhhhccch
Q 023456 125 SFGSVYLSWEALCKF--TPLYYFDTSGYAFTYPLA--RIFGCRVICY-THYPTISLDMISRVREGSSMYNNNASIAQSNW 199 (282)
Q Consensus 125 ~l~~~~la~eal~~~--~pDv~Ids~g~af~~pv~--~~~~~~~i~Y-~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~ 199 (282)
.+.....++..+.+. +||+++.+-|+. |++ ++.+.|.+.| +|... .+|.....+.-
T Consensus 76 l~~~~~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~~p~~~~~~~esn-------~~~~~~~~~~~--------- 136 (396)
T TIGR03492 76 LVGLTLGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSGKPYAFVGTAKSD-------YYWESGPRRSP--------- 136 (396)
T ss_pred HHHHHHHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcCCCceEEEeeccc-------eeecCCCCCcc---------
Confidence 344555566667777 899999985554 443 3467776543 36554 22221111111
Q ss_pred hhHHHHHHHHHHH------HHHHHhcCCCcEEEEcCHHHHHHHHH
Q 023456 200 LSQCKIVYYTFFS------WMYGLVGSCADLAMVNSSWTQSHIEK 238 (282)
Q Consensus 200 ~s~~k~~Y~~~~~------~l~~~~~~~~D~vlvNSs~T~~~Ik~ 238 (282)
...|.++-. --..+.++.+|.+.+.-..|++.+++
T Consensus 137 ----~~~~~~~~G~~~~p~e~n~l~~~~a~~v~~~~~~t~~~l~~ 177 (396)
T TIGR03492 137 ----SDEYHRLEGSLYLPWERWLMRSRRCLAVFVRDRLTARDLRR 177 (396)
T ss_pred ----chhhhccCCCccCHHHHHHhhchhhCEEeCCCHHHHHHHHH
Confidence 112222211 12446688999999999999999875
No 80
>PLN02846 digalactosyldiacylglycerol synthase
Probab=62.54 E-value=1.7e+02 Score=29.42 Aligned_cols=43 Identities=7% Similarity=0.000 Sum_probs=26.9
Q ss_pred CCCcEEEEEcc-CCCCCCchhHHHHHHHHHHHHhCCC-CcEEEEcCc
Q 023456 32 NRTTSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPD-LDCIVYTGD 76 (282)
Q Consensus 32 ~~~~~VafvHp-~l~~~GGgErVl~~a~~aL~~~~p~-~~v~IYT~~ 76 (282)
++||+||+|=+ |+-..+|-=.-....++.|.+. | ++|.++...
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~--G~heV~vvaP~ 46 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD--GDREVTLVIPW 46 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc--CCcEEEEEecC
Confidence 46799998754 2334445523233334588898 8 798887654
No 81
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=59.71 E-value=1.1e+02 Score=30.90 Aligned_cols=86 Identities=7% Similarity=-0.036 Sum_probs=47.8
Q ss_pred HHHHhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHH
Q 023456 133 WEALCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (282)
Q Consensus 133 ~eal~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~ 211 (282)
++.|...++||+|-.-+.-...+++.. ..+|.+..+|.-.++.. + ...+ ....+..|...+
T Consensus 204 ~~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~~-------------~---~~~~--~~~~~~~y~~~~ 265 (500)
T TIGR02918 204 LKQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSES-------------A---TNET--YILWNNYYEYQF 265 (500)
T ss_pred HHHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcCc-------------c---Ccch--hHHHHHHHHHHH
Confidence 345545678965543333333344444 68999999997542100 0 0000 001112222111
Q ss_pred HHHHHHhcCCCcEEEEcCHHHHHHHHHHhC
Q 023456 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWG 241 (282)
Q Consensus 212 ~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~ 241 (282)
..++.+|.+++.|.+.++.+++.++
T Consensus 266 -----~~~~~~D~iI~~S~~~~~~l~~~~~ 290 (500)
T TIGR02918 266 -----SNADYIDFFITATDIQNQILKNQFK 290 (500)
T ss_pred -----hchhhCCEEEECCHHHHHHHHHHhh
Confidence 1256799999999999999988775
No 82
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=58.88 E-value=47 Score=31.82 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=24.5
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCCC-CCceEEcCCCCC
Q 023456 219 GSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDT 255 (282)
Q Consensus 219 ~~~~D~vlvNSs~T~~~Ik~~~~~~-r~~~VvYPPVd~ 255 (282)
.+.+|.+++.|..+++.+.+. |.+ .+..|+--|++.
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~~-gi~~~ki~v~GiPv~~ 181 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFIDV-GIDPSTVKVTGIPIDN 181 (391)
T ss_pred cCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECeecCh
Confidence 467999999999999988763 521 233445457753
No 83
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=55.93 E-value=97 Score=24.24 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHhCCCCcEEEEcCcC
Q 023456 51 ERVLWCAVKAIQEESPDLDCIVYTGDH 77 (282)
Q Consensus 51 ErVl~~a~~aL~~~~p~~~v~IYT~~~ 77 (282)
|-.+.+.+++|++. |++|.+.|...
T Consensus 10 ~~~~~~~~~~L~~~--g~~V~ii~~~~ 34 (139)
T PF13477_consen 10 STFIYNLAKELKKR--GYDVHIITPRN 34 (139)
T ss_pred HHHHHHHHHHHHHC--CCEEEEEEcCC
Confidence 34566888999998 99999988753
No 84
>PRK14099 glycogen synthase; Provisional
Probab=50.91 E-value=2.7e+02 Score=27.79 Aligned_cols=46 Identities=17% Similarity=0.006 Sum_probs=35.5
Q ss_pred HhcCCCcEEEEcCHHHHHHHHHHhC---------C-CCCceEEcCCCCCCcccCCC
Q 023456 217 LVGSCADLAMVNSSWTQSHIEKLWG---------I-PDRIKRVYPPCDTSGLQACN 262 (282)
Q Consensus 217 ~~~~~~D~vlvNSs~T~~~Ik~~~~---------~-~r~~~VvYPPVd~~~f~~~~ 262 (282)
+...++|.+++.|...++.+++.+. . ..+..+|+--||++.|.+..
T Consensus 205 ~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~ 260 (485)
T PRK14099 205 AGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPAT 260 (485)
T ss_pred HHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccc
Confidence 3455799999999999999986431 1 24678999999999887654
No 85
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=48.63 E-value=26 Score=29.92 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=28.8
Q ss_pred CCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEE
Q 023456 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (282)
Q Consensus 31 ~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~I 72 (282)
.+.+.+|.|+ ||.|.++..+++.|++.||+..++-
T Consensus 45 ~~~~~~ifll-------G~~~~~~~~~~~~l~~~yP~l~ivg 79 (172)
T PF03808_consen 45 EQRGKRIFLL-------GGSEEVLEKAAANLRRRYPGLRIVG 79 (172)
T ss_pred HHcCCeEEEE-------eCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 3445677764 9999999999999999999999663
No 86
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=46.67 E-value=87 Score=27.36 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=12.9
Q ss_pred CcEEEEEccCCCCCCchhHHH
Q 023456 34 TTSVAFFHPNTNDGGGGERVL 54 (282)
Q Consensus 34 ~~~VafvHp~l~~~GGgErVl 54 (282)
+.+|+++=-|....|+-|++-
T Consensus 29 ~~~v~lis~D~~R~ga~eQL~ 49 (196)
T PF00448_consen 29 GKKVALISADTYRIGAVEQLK 49 (196)
T ss_dssp T--EEEEEESTSSTHHHHHHH
T ss_pred cccceeecCCCCCccHHHHHH
Confidence 667777777776666666653
No 87
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=45.97 E-value=30 Score=29.97 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=28.8
Q ss_pred CCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEE
Q 023456 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (282)
Q Consensus 32 ~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IY 73 (282)
+++.+|.| .||.|-|+..+++.|++.||+.+++-+
T Consensus 46 ~~~~~vfl-------lG~~~~v~~~~~~~l~~~yP~l~i~g~ 80 (177)
T TIGR00696 46 KEKLPIFL-------YGGKPDVLQQLKVKLIKEYPKLKIVGA 80 (177)
T ss_pred HcCCeEEE-------ECCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 34457766 389999999999999999999997754
No 88
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=41.54 E-value=1.4e+02 Score=28.66 Aligned_cols=97 Identities=14% Similarity=0.246 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeecccCCchhhhhHHHH---HH
Q 023456 53 VLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG---SV 129 (282)
Q Consensus 53 Vl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~~p~~tl~~q~l~---~~ 129 (282)
+.-.+++.|.+. |++|.|-+-+.+ .-.++ -+.+|.+.. .+.+ .+ -++....+. ..
T Consensus 15 fFk~~I~eL~~~--GheV~it~R~~~-~~~~L----L~~yg~~y~------~iG~--------~g-~~~~~Kl~~~~~R~ 72 (335)
T PF04007_consen 15 FFKNIIRELEKR--GHEVLITARDKD-ETEEL----LDLYGIDYI------VIGK--------HG-DSLYGKLLESIERQ 72 (335)
T ss_pred HHHHHHHHHHhC--CCEEEEEEeccc-hHHHH----HHHcCCCeE------EEcC--------CC-CCHHHHHHHHHHHH
Confidence 345677889998 999888554443 11223 234444321 1110 01 122222222 11
Q ss_pred HHHHHHHhcCCCcEEEECCCCccccceecccCCeeEEEeecCC
Q 023456 130 YLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPT 172 (282)
Q Consensus 130 ~la~eal~~~~pDv~Ids~g~af~~pv~~~~~~~~i~Y~HyP~ 172 (282)
.-.++.+.+.+||++|+. +..-+.-+....|.|+|....+|.
T Consensus 73 ~~l~~~~~~~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~ 114 (335)
T PF04007_consen 73 YKLLKLIKKFKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEH 114 (335)
T ss_pred HHHHHHHHhhCCCEEEec-CcHHHHHHHHHhCCCeEEEecCch
Confidence 122334456789999975 332121244457888888888774
No 89
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=41.52 E-value=1.2e+02 Score=28.90 Aligned_cols=27 Identities=22% Similarity=0.467 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcCCCcEEEECCCCccccc
Q 023456 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP 155 (282)
Q Consensus 128 ~~~la~eal~~~~pDv~Ids~g~af~~p 155 (282)
....+.+-+.+.+||+++.+-|++ +.|
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~-s~p 105 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFV-SVP 105 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchh-hHH
Confidence 444455567788999999985564 434
No 90
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=38.31 E-value=1e+02 Score=28.65 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCCcEEEEcCc
Q 023456 55 WCAVKAIQEESPDLDCIVYTGD 76 (282)
Q Consensus 55 ~~a~~aL~~~~p~~~v~IYT~~ 76 (282)
.-++++|++.||++++.+.|..
T Consensus 17 tp~l~~Lk~~~P~a~I~~l~~~ 38 (344)
T TIGR02201 17 TPVISSLKKNYPDAKIDVLLYQ 38 (344)
T ss_pred HHHHHHHHHHCCCCEEEEEECc
Confidence 3567889999999998877654
No 91
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=37.39 E-value=1.9e+02 Score=27.87 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCc
Q 023456 128 SVYLSWEALCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTI 173 (282)
Q Consensus 128 ~~~la~eal~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~i 173 (282)
.+.-+.+.+...+||+++.+-|+. +.|.... ...++=.++|-.+.
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyv-s~P~~~Aa~~~~iPv~ihEqn~ 124 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYV-SGPVGIAAKLLGIPVIIHEQNA 124 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCcc-ccHHHHHHHhCCCCEEEEecCC
Confidence 444566677889999999997765 5564432 22223345666553
No 92
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=35.89 E-value=67 Score=33.45 Aligned_cols=44 Identities=18% Similarity=0.375 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhcCCCc--EEEECCCCccccceecc---cCC--eeEEEeecCC
Q 023456 126 FGSVYLSWEALCKFTPL--YYFDTSGYAFTYPLARI---FGC--RVICYTHYPT 172 (282)
Q Consensus 126 l~~~~la~eal~~~~pD--v~Ids~g~af~~pv~~~---~~~--~~i~Y~HyP~ 172 (282)
+..+-...+.+...+|| |.||..| |...+.+. .|. |++.|+ .|.
T Consensus 296 ~~~~~~l~~~i~~~kPD~vIlID~Pg--FNlrLAK~lkk~Gi~ipviyYV-sPq 346 (608)
T PRK01021 296 WYRYRKLYKTILKTNPRTVICIDFPD--FHFLLIKKLRKRGYKGKIVHYV-CPS 346 (608)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCC--CCHHHHHHHHhcCCCCCEEEEE-Ccc
Confidence 33444455667778899 6679754 66777653 454 877776 565
No 93
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=35.45 E-value=2.5e+02 Score=26.66 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=23.9
Q ss_pred CcEEEEEccCCCCCCchhHHHHHHHHHHHH-hCCCCcEEE
Q 023456 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQE-ESPDLDCIV 72 (282)
Q Consensus 34 ~~~VafvHp~l~~~GGgErVl~~a~~aL~~-~~p~~~v~I 72 (282)
...|.++=|-.|. |..+.+.++++.+ .||+.+|++
T Consensus 40 ~p~VSViiP~~ne----e~~l~~~L~Sl~~q~Yp~~EIiv 75 (373)
T TIGR03472 40 WPPVSVLKPLHGD----EPELYENLASFCRQDYPGFQMLF 75 (373)
T ss_pred CCCeEEEEECCCC----ChhHHHHHHHHHhcCCCCeEEEE
Confidence 4579999996653 3445566677755 478888766
No 94
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=33.96 E-value=1.8e+02 Score=29.53 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=28.1
Q ss_pred CCcEEEEEccCCCCCCchhHHHHHHHHHH-HHh-CCCCcEEEEc
Q 023456 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAI-QEE-SPDLDCIVYT 74 (282)
Q Consensus 33 ~~~~VafvHp~l~~~GGgErVl~~a~~aL-~~~-~p~~~v~IYT 74 (282)
...+|+++=|-.| .|.|+.++++.+ .+. ||+.+|++-+
T Consensus 64 ~~p~vaIlIPA~N----E~~vI~~~l~s~L~~ldY~~~eIiVv~ 103 (504)
T PRK14716 64 PEKRIAIFVPAWR----EADVIGRMLEHNLATLDYENYRIFVGT 103 (504)
T ss_pred CCCceEEEEeccC----chhHHHHHHHHHHHcCCCCCeEEEEEE
Confidence 3578999999998 467888888875 333 7888876644
No 95
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=30.32 E-value=98 Score=28.88 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=20.6
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC
Q 023456 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC 253 (282)
Q Consensus 221 ~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPV 253 (282)
.+|.+++.|.++++.+++ ++ .+..++-.|+
T Consensus 134 ~~d~i~~~~~~~~~~~~~-~g--~~~~~~G~p~ 163 (380)
T PRK00025 134 ATDHVLALFPFEAAFYDK-LG--VPVTFVGHPL 163 (380)
T ss_pred HHhhheeCCccCHHHHHh-cC--CCeEEECcCH
Confidence 579999999999988876 35 3444443344
No 96
>PF02504 FA_synthesis: Fatty acid synthesis protein; InterPro: IPR003664 The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes []. The plsX gene encodes a poorly understood enzyme of phospholipid metabolism [].; GO: 0003824 catalytic activity, 0006633 fatty acid biosynthetic process; PDB: 1VI1_B 1U7N_B.
Probab=28.23 E-value=2.8e+02 Score=26.57 Aligned_cols=24 Identities=13% Similarity=0.124 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhcCCCcEEEECCCCc
Q 023456 127 GSVYLSWEALCKFTPLYYFDTSGYA 151 (282)
Q Consensus 127 ~~~~la~eal~~~~pDv~Ids~g~a 151 (282)
.+|..+++.+.....|.++++ |..
T Consensus 81 SSm~~a~~lvk~g~ada~vSa-GnT 104 (323)
T PF02504_consen 81 SSMVVALELVKEGEADAFVSA-GNT 104 (323)
T ss_dssp CHHHHHHHHHHTTS-SEEEES-S-H
T ss_pred CcHHHHHHHhhcCCceEEEec-Cch
Confidence 589999999998889999997 654
No 97
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=28.17 E-value=97 Score=28.68 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=27.2
Q ss_pred CcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEE
Q 023456 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (282)
Q Consensus 34 ~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~I 72 (282)
..+|.| .||.+-|+.+|...+++.||++.++-
T Consensus 108 ~~~vfl-------lGgkp~V~~~a~~~l~~~~p~l~ivg 139 (253)
T COG1922 108 GKRVFL-------LGGKPGVAEQAAAKLRAKYPGLKIVG 139 (253)
T ss_pred CceEEE-------ecCCHHHHHHHHHHHHHHCCCceEEE
Confidence 367766 49999999999999999999998654
No 98
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=27.45 E-value=3.4e+02 Score=24.30 Aligned_cols=89 Identities=13% Similarity=0.033 Sum_probs=0.0
Q ss_pred EEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCCeEEEccccceeeccc
Q 023456 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (282)
Q Consensus 36 ~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~~fv~l~~~~~l~~~~ 115 (282)
+|.+++++ .=|-=-+..-++++|.+.+|+++|.+.|... ...+-...+.-.+++.....+
T Consensus 1 kILii~~~---~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~-----------~~~l~~~~p~id~v~~~~~~~------ 60 (279)
T cd03789 1 RILVIRLS---WIGDVVLATPLLRALKARYPDARITVLAPPW-----------FAPLLELMPEVDRVIVLPKKH------ 60 (279)
T ss_pred CEEEEecc---cHHHHHHHHHHHHHHHHHCCCCEEEEEEChh-----------hHHHHhcCCccCEEEEcCCcc------
Q ss_pred CCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCC
Q 023456 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGY 150 (282)
Q Consensus 116 ~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~ 150 (282)
..+.+..+.-.++.+.+..+|+++|..+.
T Consensus 61 ------~~~~~~~~~~~~~~l~~~~~D~vi~~~~~ 89 (279)
T cd03789 61 ------GKLGLGARRRLARALRRRRYDLAIDLQGS 89 (279)
T ss_pred ------cccchHHHHHHHHHHhhcCCCEEEECCCc
No 99
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=26.22 E-value=5.4e+02 Score=25.40 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=31.6
Q ss_pred CCcEEEE-EccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcC
Q 023456 33 RTTSVAF-FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (282)
Q Consensus 33 ~~~~Vaf-vHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~ 77 (282)
+.+||.| .|+-+| .|==-|-. .++++|++.+++.+|.+-|+-.
T Consensus 8 ~~~Ri~~Yshd~~G-lGHlrR~~-~Ia~aLv~d~~~~~Il~IsG~~ 51 (400)
T COG4671 8 KRPRILFYSHDLLG-LGHLRRAL-RIAHALVEDYLGFDILIISGGP 51 (400)
T ss_pred ccceEEEEehhhcc-chHHHHHH-HHHHHHhhcccCceEEEEeCCC
Confidence 3457765 555554 57666655 7889999999999999988864
No 100
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=24.09 E-value=81 Score=26.87 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.9
Q ss_pred CCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEE
Q 023456 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (282)
Q Consensus 31 ~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~I 72 (282)
.+++.+|.++ ||.|-++..+++.+++.||+..++-
T Consensus 43 ~~~~~~v~ll-------G~~~~~~~~~~~~l~~~yp~l~i~g 77 (171)
T cd06533 43 AQKGLRVFLL-------GAKPEVLEKAAERLRARYPGLKIVG 77 (171)
T ss_pred HHcCCeEEEE-------CCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 3446688774 8999999999999999999999664
No 101
>PF14654 Epiglycanin_C: Mucin, catalytic, TM and cytoplasmic tail region
Probab=23.80 E-value=1.5e+02 Score=23.60 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccC---CC-CcEEEEEccC
Q 023456 7 LIWAVITAVLASILILASHVHNARR---NR-TTSVAFFHPN 43 (282)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~VafvHp~ 43 (282)
.++|.|+++.+.+...+.+++..|. -+ ...-|+-||.
T Consensus 20 IfLItLasVvvavGl~aGLfFcvR~~lslrn~~~ta~Y~PH 60 (106)
T PF14654_consen 20 IFLITLASVVVAVGLFAGLFFCVRNSLSLRNTFDTAVYRPH 60 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccceEccC
Confidence 4667777777777767766644442 22 2244899998
No 102
>COG3399 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.50 E-value=1e+02 Score=25.71 Aligned_cols=43 Identities=23% Similarity=0.382 Sum_probs=21.9
Q ss_pred CchhHHHHH-HHHHHHHHHHHHHHhhhhccCCCCcEEE-EEccCC
Q 023456 2 APYGILIWA-VITAVLASILILASHVHNARRNRTTSVA-FFHPNT 44 (282)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Va-fvHp~l 44 (282)
.|+|-.++. .|+++.++.+..-.+.-.+-.+++..+| ++||--
T Consensus 85 tpf~~~l~lKiiLAfsif~Lv~Fsl~c~f~~kk~npvGkyIHpvv 129 (148)
T COG3399 85 TPFGTMLTLKIILAFSIFLLVHFSLACVFMAKKTNPVGKYIHPVV 129 (148)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccceehHHH
Confidence 367777776 7777777443333322111122223333 888854
No 103
>PF06522 B12D: NADH-ubiquinone reductase complex 1 MLRQ subunit; InterPro: IPR010530 The MLRQ subunit of mitochondrial NADH-ubiquinone reductase complex I is nuclear [] and is found in plants [], insects, fungi and higher metazoans []. It appears to act within the membrane and, in mammals, is highly expressed in muscle and neural tissue, indicative of a role in ATP generation [].
Probab=21.26 E-value=1.7e+02 Score=21.62 Aligned_cols=38 Identities=18% Similarity=0.440 Sum_probs=21.7
Q ss_pred eecccCCchhhhhHHHH-HHHHHHHHHhcCCCcEEEECCC
Q 023456 111 IEESTYPRFTMIGQSFG-SVYLSWEALCKFTPLYYFDTSG 149 (282)
Q Consensus 111 l~~~~~p~~tl~~q~l~-~~~la~eal~~~~pDv~Ids~g 149 (282)
..++.+|-+-+++-+.+ ......+.+ ...|||.+|-..
T Consensus 2 ~~pel~PL~~~vg~a~~~a~~~~~r~l-~~~PdV~~~k~~ 40 (73)
T PF06522_consen 2 KHPELYPLFVIVGVAVGGATFYLYRLL-LTNPDVRWNKKN 40 (73)
T ss_pred CCccccchHHHHHHHHHHHHHHHHHHH-hcCCCeEEEecC
Confidence 34566787666665543 222233333 357999998653
No 104
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=20.28 E-value=3.3e+02 Score=25.50 Aligned_cols=42 Identities=10% Similarity=0.059 Sum_probs=28.9
Q ss_pred CCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCc
Q 023456 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (282)
Q Consensus 32 ~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~ 76 (282)
+..++|-++.+.. .| ==-...-++++|.+.||++++.+-+..
T Consensus 3 ~~~~~ILii~~~~--iG-D~vl~~P~l~~Lk~~~P~a~I~~l~~~ 44 (352)
T PRK10422 3 KPFRRILIIKMRF--HG-DMLLTTPVISSLKKNYPDAKIDVLLYQ 44 (352)
T ss_pred CCCceEEEEEecc--cC-ceeeHHHHHHHHHHHCCCCeEEEEecc
Confidence 3457899998765 33 222334567899999999998776543
No 105
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.27 E-value=3.1e+02 Score=25.25 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=23.4
Q ss_pred EEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCc
Q 023456 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (282)
Q Consensus 37 VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~ 76 (282)
|.|+++..- | -=-+..-++++|++.||++++.+.|..
T Consensus 2 ILii~~~~i--G-D~i~~~p~l~~Lk~~~P~a~I~~l~~~ 38 (334)
T TIGR02195 2 ILVIGPSWV--G-DMVMAQSLYRLLKKRYPQAVIDVLAPA 38 (334)
T ss_pred EEEEccchh--H-HHHHHHHHHHHHHHHCCCCEEEEEech
Confidence 555555541 2 222334567889999999998876643
Done!