Query 023458
Match_columns 282
No_of_seqs 188 out of 414
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 07:06:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.2 4.2E-11 1.4E-15 110.0 8.8 147 36-218 52-262 (285)
2 4f6o_A Metacaspase-1; rossmann 98.6 6.7E-08 2.3E-12 91.8 9.0 61 65-127 125-201 (350)
3 4af8_A Metacaspase MCA2; hydro 98.6 8.6E-08 2.9E-12 91.7 9.1 144 38-203 148-333 (367)
4 3uoa_B Mucosa-associated lymph 98.4 2E-06 6.8E-11 82.8 12.1 137 37-202 47-200 (390)
5 1m72_A Caspase-1; caspase, cys 96.3 0.011 3.7E-07 53.9 8.1 142 37-203 76-234 (272)
6 3h11_B Caspase-8; cell death, 95.9 0.032 1.1E-06 50.7 9.4 143 37-203 69-236 (271)
7 2j32_A Caspase-3; Pro-caspase3 95.9 0.012 4.2E-07 52.7 6.4 142 37-203 61-217 (250)
8 3sir_A Caspase; hydrolase; 2.6 95.8 0.036 1.2E-06 50.0 9.0 138 38-203 65-224 (259)
9 4ehd_A Caspase-3; caspase, apo 95.7 0.032 1.1E-06 51.0 8.3 142 37-203 89-245 (277)
10 2nn3_C Caspase-1; cysteine pro 95.6 0.022 7.6E-07 53.0 7.1 142 37-203 104-262 (310)
11 3od5_A Caspase-6; caspase doma 95.5 0.038 1.3E-06 50.4 8.2 143 37-204 66-236 (278)
12 1f1j_A Caspase-7 protease; cas 95.4 0.034 1.2E-06 51.5 7.6 142 37-203 114-273 (305)
13 1nw9_B Caspase 9, apoptosis-re 95.2 0.064 2.2E-06 48.6 8.7 143 37-203 66-254 (277)
14 2fp3_A Caspase NC; apoptosis, 95.0 0.066 2.2E-06 49.8 8.2 145 37-204 104-286 (316)
15 3e4c_A Caspase-1; zymogen, inf 94.0 0.26 8.7E-06 45.5 9.7 143 37-202 102-276 (302)
16 2h54_A Caspase-1; allosteric s 92.6 0.14 4.7E-06 43.9 5.1 80 37-124 85-170 (178)
17 3h11_A CAsp8 and FADD-like apo 86.9 1.8 6.1E-05 39.3 7.8 78 37-122 74-154 (272)
18 1pyo_A Caspase-2; apoptosis, c 81.3 0.75 2.6E-05 38.9 2.5 81 37-125 78-159 (167)
19 1qtn_A Caspase-8; apoptosis, d 76.6 0.98 3.3E-05 38.0 1.8 80 37-125 75-155 (164)
20 3p45_A Caspase-6; protease, hu 71.4 2.3 8E-05 36.4 2.9 79 37-125 89-168 (179)
21 2dko_A Caspase-3; low barrier 66.4 1.5 5.3E-05 36.1 0.7 77 38-124 62-139 (146)
22 2ql9_A Caspase-7; cysteine pro 56.3 3.1 0.00011 35.3 0.8 78 37-124 89-167 (173)
23 3m7v_A Phosphopentomutase; str 26.8 20 0.0007 31.7 1.2 22 60-81 324-345 (413)
24 1cvr_A Gingipain R, RGPB; casp 25.6 32 0.0011 33.0 2.4 47 71-126 204-250 (435)
25 4gdk_A Ubiquitin-like protein 23.4 47 0.0016 25.1 2.5 34 37-81 28-61 (91)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.18 E-value=4.2e-11 Score=109.96 Aligned_cols=147 Identities=13% Similarity=0.151 Sum_probs=104.7
Q ss_pred CCCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC-------------CccCCCCCCCCCHHHHHHHHH
Q 023458 36 GEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP-------------GVLGMPNMPYVYAMEFIDVLK 102 (282)
Q Consensus 36 g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~-------------g~l~fpd~~~L~a~dL~~~l~ 102 (282)
..+.|.+|+++.|..-. -...++|.+||||+|||.. ++|...|.. |..++|.+.|+
T Consensus 52 ~~~~t~~~i~~al~~l~----------~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~-i~~~~l~~~l~ 120 (285)
T 3bij_A 52 TKAATRAKVIDAIGKAA----------KALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGE-LIDDELYALLG 120 (285)
T ss_dssp GGGCCHHHHHHHHHHHH----------HHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSE-EEHHHHHHHHT
T ss_pred CCccCHHHHHHHHHHHH----------HhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCC-ccHHHHHHHHH
Confidence 34678999988886221 1246889999999999962 355555554 77889998887
Q ss_pred HHHHcCCCCeEEEEEecccccccccc----------------------cCC-----------------------------
Q 023458 103 KKHAAKSYKGMVIYVEACESGSIFEG----------------------VMP----------------------------- 131 (282)
Q Consensus 103 ~M~~~~~Ykk~v~~iEAC~SGSmf~~----------------------~lp----------------------------- 131 (282)
.|. .-+++++++|||+||++... .+|
T Consensus 121 ~l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (285)
T 3bij_A 121 KFA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLAD 197 (285)
T ss_dssp TSC---SSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTT
T ss_pred hcc---CCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhcccccccC
Confidence 663 35789999999999998762 011
Q ss_pred CCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhhhccccCchhcHHHHHHHHHhhhccCCCCCCCC
Q 023458 132 KDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGS 211 (282)
Q Consensus 132 ~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~~~~~~~~~S 211 (282)
...++++++|+.++|.||-.- .- -+||.++++-..... ...|+.++++.|++++.. ..
T Consensus 198 ~~~~~i~lsa~~~~q~A~e~~----------~~-----G~FT~aLl~~L~~~~-~~~s~~~l~~~v~~~~~~------~Q 255 (285)
T 3bij_A 198 VKASILLISGCQDNQLSQDGA----------FN-----GAFTGQLLRVWKNGL-YKGSYRSFHKAIVRRMPP------DQ 255 (285)
T ss_dssp CSSEEEEEESSCTTSCCEECS----------SS-----CHHHHHHHHHHGGGT-CCSCHHHHHHHHHHHSCT------TC
T ss_pred CCCCEEEEEeCCCCccccccc----------cC-----CHHHHHHHHHHhhCC-CCcCHHHHHHHHHHhcCC------CC
Confidence 123689999999999998531 11 368888886443221 346999999999987642 38
Q ss_pred ccceecC
Q 023458 212 HVMEYGN 218 (282)
Q Consensus 212 hv~~yGd 218 (282)
|++.||.
T Consensus 256 ~P~~~~~ 262 (285)
T 3bij_A 256 TPNFFTA 262 (285)
T ss_dssp CCEEEEE
T ss_pred CcceeCC
Confidence 8888875
No 2
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=98.64 E-value=6.7e-08 Score=91.85 Aligned_cols=61 Identities=26% Similarity=0.542 Sum_probs=44.5
Q ss_pred CCCCCeEEEEEecCCCC----------C---ccCCCCC---CCCCHHHHHHHHHHHHHcCCCCeEEEEEeccccccccc
Q 023458 65 SKANDRIFIFYSDHGGP----------G---VLGMPNM---PYVYAMEFIDVLKKKHAAKSYKGMVIYVEACESGSIFE 127 (282)
Q Consensus 65 S~~~D~VFiY~tgHGg~----------g---~l~fpd~---~~L~a~dL~~~l~~M~~~~~Ykk~v~~iEAC~SGSmf~ 127 (282)
..++|.+||||+|||.. | .|+-.|. ..|..+||.+.|.+.. ..=.++++|+|+|+||++.+
T Consensus 125 a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l--~~g~~vt~IlD~ChSGt~ld 201 (350)
T 4f6o_A 125 AQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPL--QQGVRLTALFDSCHSGTVLD 201 (350)
T ss_dssp CCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTTTC--CTTCEEEEEECSSSCTTTTC
T ss_pred CCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhc--CCCCeEEEEEccCCCCcccc
Confidence 46899999999999972 2 2443341 2588889988876322 23368999999999999975
No 3
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=98.62 E-value=8.6e-08 Score=91.66 Aligned_cols=144 Identities=13% Similarity=0.121 Sum_probs=91.8
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC---------Cc---cCCCCC---CCCCHHHHHHHH-
Q 023458 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP---------GV---LGMPNM---PYVYAMEFIDVL- 101 (282)
Q Consensus 38 ~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~---------g~---l~fpd~---~~L~a~dL~~~l- 101 (282)
..|.+|+++.|.-- +-...++|.+||||+|||.. |+ |.-.|. ..|..+||.+.|
T Consensus 148 ~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv 217 (367)
T 4af8_A 148 QPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLF 217 (367)
T ss_dssp CCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHHHT
T ss_pred CCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHHH
Confidence 45666666666411 01246899999999999982 22 333331 247778888874
Q ss_pred HHHHHcCCCCeEEEEEecccccccccccC-----------------------CCCCCEEEEeccCCCCccccccCCCCCC
Q 023458 102 KKKHAAKSYKGMVIYVEACESGSIFEGVM-----------------------PKDLDIYVTTASNAQESSFGTYCPGMDP 158 (282)
Q Consensus 102 ~~M~~~~~Ykk~v~~iEAC~SGSmf~~~l-----------------------p~~~nV~~iTAS~~~EsSya~~~~~~~~ 158 (282)
+.+ ..=.++++++|+|+||++.+--. +..-+|+.++|+..+|.|.-..-..
T Consensus 218 ~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~~~~--- 291 (367)
T 4af8_A 218 SRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADVKNTA--- 291 (367)
T ss_dssp TTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCCC------
T ss_pred Hhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhhhccc---
Confidence 333 22368999999999999976110 0012689999999999998653100
Q ss_pred CCCCCcc---chhhhhhhhhhhhhhccccCchhcHHHHHHHHHhhhcc
Q 023458 159 SPPPEYI---TCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 159 ~~~~~~~---t~lgD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
.++ .--.-+||+++++-... .+..|..++++.++.....
T Consensus 292 ----~f~~g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~~ 333 (367)
T 4af8_A 292 ----TFGTGSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLKR 333 (367)
T ss_dssp --------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHHH
T ss_pred ----cccccccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHH
Confidence 000 01235789988876543 3556888899988887653
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.39 E-value=2e-06 Score=82.81 Aligned_cols=137 Identities=11% Similarity=0.134 Sum_probs=92.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC----CccCCCCCC-------CCCHHHHHHHHHHHH
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP----GVLGMPNMP-------YVYAMEFIDVLKKKH 105 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~----g~l~fpd~~-------~L~a~dL~~~l~~M~ 105 (282)
.++|.+++.+.|.--. .+ ..+.|.+++||+|||.. ++|.--|.. .+..++|.+.|+.
T Consensus 47 ~DlT~~eI~~aL~~f~-------~~---~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~-- 114 (390)
T 3uoa_B 47 LDLTEYEMRNAVDEFL-------LL---LDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE-- 114 (390)
T ss_dssp ESCCHHHHHHHHHHHH-------HT---CCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH--
T ss_pred ecCCHHHHHHHHHHHH-------hh---CCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh--
Confidence 4688999988887211 11 24679999999999954 454333332 3566666666553
Q ss_pred HcCCCCeEEEEEecccccccccc------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhh
Q 023458 106 AAKSYKGMVIYVEACESGSIFEG------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (282)
Q Consensus 106 ~~~~Ykk~v~~iEAC~SGSmf~~------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~ 179 (282)
..=|..||++|||+++..+.. .+|...++++..|+.+++.||-...++ .. |-+|+....+-
T Consensus 115 --~~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~~----gS~FtqaL~e~ 181 (390)
T 3uoa_B 115 --KETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------LA----NGIFMKFLKDR 181 (390)
T ss_dssp --TTCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------TC----CCHHHHHHTTT
T ss_pred --cCCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------CC----CCHHHHHHHHH
Confidence 344678999999999755542 234445899999999999999763211 11 24566666654
Q ss_pred hccccCchhcHHHHHHHHHhhhc
Q 023458 180 SETHNLKRETISQQYQAVKERTS 202 (282)
Q Consensus 180 ~~~~~~~~~Tl~~~f~~vk~~t~ 202 (282)
... ..+|.++|..|.+++.
T Consensus 182 L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 182 LLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TTC----SSCHHHHHHHHHHHHT
T ss_pred Hcc----CCCHHHHHHHHHHHHh
Confidence 432 5789999999999985
No 5
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=96.29 E-value=0.011 Score=53.87 Aligned_cols=142 Identities=11% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+.++|+--. .+ .-...|-+++||.+||..|+|.--|+. +.-++|...|..-. ..-.=|=-||
T Consensus 76 ~dlt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gKPKlf 145 (272)
T 1m72_A 76 PNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLF 145 (272)
T ss_dssp ESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCcCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCCceEE
Confidence 4567777776666211 11 113457788999999999988776764 66666666554200 0011233588
Q ss_pred EEecccccccccc----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhh
Q 023458 116 YVEACESGSIFEG----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (282)
Q Consensus 116 ~iEAC~SGSmf~~----------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~ 179 (282)
+|+||...-+-.+ .+|...++++.=|+.++.-||-.- .-| -+|.-...+.
T Consensus 146 fiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~~----------~~G----S~fiq~L~~~ 211 (272)
T 1m72_A 146 FIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRNT----------TRG----SWFMQALCEE 211 (272)
T ss_dssp EEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEET----------TTE----EHHHHHHHHH
T ss_pred EEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecCC----------CCC----CHHHHHHHHH
Confidence 9999985433111 134334677777777777666531 222 2333333332
Q ss_pred hccccCchhcHHHHHHHHHhhhcc
Q 023458 180 SETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 180 ~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
... ......|.++|..|.+++..
T Consensus 212 l~~-~~~~~dl~~ilt~V~~~V~~ 234 (272)
T 1m72_A 212 LRY-AGTERDILTLLTFVCQKVAL 234 (272)
T ss_dssp HHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHh-hCCCCCHHHHHHHHHHHHHH
Confidence 221 12457899999999998863
No 6
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=95.93 E-value=0.032 Score=50.74 Aligned_cols=143 Identities=17% Similarity=0.219 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+--. .+ .-...|-++++|.+||..|.|.--|+..+.-++|...|..-. ..-.=|=-||
T Consensus 69 ~dlt~~em~~~l~~~~-------~~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlf 139 (271)
T 3h11_B 69 DDCTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVF 139 (271)
T ss_dssp ESCCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHHH-------Hh--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccChhhcCCccEE
Confidence 4677777777776211 01 123467788888999999988766765465555555553100 0011234589
Q ss_pred EEecccccccccc-----------------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhh
Q 023458 116 YVEACESGSIFEG-----------------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLY 172 (282)
Q Consensus 116 ~iEAC~SGSmf~~-----------------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~f 172 (282)
+|.||...-+-.+ .+|...++++.=|+-++.-||-. +.-|+ +|
T Consensus 140 fiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~~~GS----~f 205 (271)
T 3h11_B 140 FIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN----------PAEGT----WY 205 (271)
T ss_dssp EEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE----------TTTEE----HH
T ss_pred EEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC----------CCCCc----HH
Confidence 9999976433111 13433467777777776666643 12232 33
Q ss_pred hhhhhhhhccccCc-hhcHHHHHHHHHhhhcc
Q 023458 173 SVAWMEDSETHNLK-RETISQQYQAVKERTSN 203 (282)
Q Consensus 173 S~~wme~~~~~~~~-~~Tl~~~f~~vk~~t~~ 203 (282)
--...+-.... .. ...|.++|..|.+++..
T Consensus 206 Iq~L~~~l~~~-~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 206 IQSLCQSLRER-CPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp HHHHHHHHHHH-GGGTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-CCCCCCHHHHHHHHHHHHhh
Confidence 33322222211 13 57899999999999874
No 7
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=95.90 E-value=0.012 Score=52.72 Aligned_cols=142 Identities=10% Similarity=0.134 Sum_probs=81.0
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+.++|+--. .+ .-...|-+++||.+||..|.|.--|+ .+.-++|...|..-. ..-.=|=-+|
T Consensus 61 ~dlt~~em~~~l~~~~-------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~gKPKlf 130 (250)
T 2j32_A 61 NDLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLF 130 (250)
T ss_dssp ESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcCCCeEE
Confidence 4667777777776211 11 11345778899999999997765555 355555555443200 0012233588
Q ss_pred EEecccccccccc--------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhhhc
Q 023458 116 YVEACESGSIFEG--------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE 181 (282)
Q Consensus 116 ~iEAC~SGSmf~~--------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~~~ 181 (282)
+|+||...-+-.+ .+|...++++.=|+.++.-||-.- ..|+ +|.-...+-..
T Consensus 131 ~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~~----------~~gS----~fiq~L~~~l~ 196 (250)
T 2j32_A 131 IIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNS----------KDGS----WFIQSLCAMLK 196 (250)
T ss_dssp EEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEET----------TTEE----HHHHHHHHHHH
T ss_pred EEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecCC----------CCCc----HHHHHHHHHHH
Confidence 9999985432111 134444777777777776666541 2232 33333332222
Q ss_pred cccCchhcHHHHHHHHHhhhcc
Q 023458 182 THNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 182 ~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
. ..+...|.++|..|.+++..
T Consensus 197 ~-~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 197 Q-YADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp H-HTTTSCHHHHHHHHHHHHHH
T ss_pred H-hCCCCCHHHHHHHHHHHHHH
Confidence 1 12457899999999988865
No 8
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=95.79 E-value=0.036 Score=50.04 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHHHcC----CCCeE
Q 023458 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKHAAK----SYKGM 113 (282)
Q Consensus 38 ~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~~~~----~Ykk~ 113 (282)
++|.+.+..+|+-- . .+ +-...|-++|+|.+||..|.|.=-|+. -.|.+.++.+...+ .=|=-
T Consensus 65 dlt~~em~~~l~~~-~------~~--~h~~~d~~v~~~lsHG~~g~i~~~D~~----v~l~~i~~~f~~~~cpsL~gKPK 131 (259)
T 3sir_A 65 DCRYKDILRTIEYS-A------SQ--NHSDSDCILVAILSHGEMGYIYAKDTQ----YKLDNIWSFFTANHCPSLAGKPK 131 (259)
T ss_dssp ECSHHHHHHHHHHH-H------TS--CCTTEEEEEEEEEECTTCCCCCCTTHH----HHHHHTTGGGSTTTCGGGSSSCE
T ss_pred CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEEecCCCCCeEEeCCCc----EEHHHHHHHhhhccCccccCCCC
Confidence 55666666666521 1 11 124567889999999999977543432 33444444433211 12445
Q ss_pred EEEEecccccccccc------------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhh
Q 023458 114 VIYVEACESGSIFEG------------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVA 175 (282)
Q Consensus 114 v~~iEAC~SGSmf~~------------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~ 175 (282)
||+|+||...-+-.+ .+|...++++.=|+.++.-||-. +..| -+|.-.
T Consensus 132 lf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~G----S~fiq~ 197 (259)
T 3sir_A 132 LFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN----------TTRG----SWFMQS 197 (259)
T ss_dssp EEEEEEETTSCEEC-----------------CEECCCCTTEEEEEEEECCSCCCSS----------CCCS----CHHHHH
T ss_pred EEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEEEECCCCeEeecC----------CCCC----cHHHHH
Confidence 899999997543222 12333466666666666666543 1222 233333
Q ss_pred hhhhhccccCchhcHHHHHHHHHhhhcc
Q 023458 176 WMEDSETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 176 wme~~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
..+-... ......|.+++..|.+++..
T Consensus 198 L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 198 LCAELAA-NGKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp HHHHHHH-HTTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 3332221 12357899999999999864
No 9
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=95.69 E-value=0.032 Score=51.04 Aligned_cols=142 Identities=11% Similarity=0.168 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+.++|+--. .+ .-...|-++|+|.+||..|.|.--|+. +.-++|...|..-. ..-.=|=-||
T Consensus 89 ~dlt~~em~~~l~~f~-------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 158 (277)
T 4ehd_A 89 NDLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLTGKPKLF 158 (277)
T ss_dssp ESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHHH-------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhcCCccEE
Confidence 3567777777766211 11 123467788899999999988666663 66555555443100 0012244589
Q ss_pred EEecccccccccc--------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhhhc
Q 023458 116 YVEACESGSIFEG--------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE 181 (282)
Q Consensus 116 ~iEAC~SGSmf~~--------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~~~ 181 (282)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +..|+ +|.-...+-..
T Consensus 159 fiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS----~fIq~L~~~l~ 224 (277)
T 4ehd_A 159 IIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN----------SKDGS----WFIQSLCAMLK 224 (277)
T ss_dssp EEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE----------TTTEE----HHHHHHHHHHH
T ss_pred EEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC----------CCCCc----HHHHHHHHHHH
Confidence 9999986543222 13333467777777777666643 12232 33333333222
Q ss_pred cccCchhcHHHHHHHHHhhhcc
Q 023458 182 THNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 182 ~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
. ......|.++|..|.+++..
T Consensus 225 ~-~~~~~dl~~ilt~V~~~V~~ 245 (277)
T 4ehd_A 225 Q-YADKLEFMHILTRVNRKVAT 245 (277)
T ss_dssp H-HTTTSCHHHHHHHHHHHHHH
T ss_pred H-HCCCCCHHHHHHHHHHHHHH
Confidence 1 12457899999999998864
No 10
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=95.62 E-value=0.022 Score=52.98 Aligned_cols=142 Identities=11% Similarity=0.126 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+.++|+--. .+ .-...|-++|||.+||..|+|.--|+. +.-++|...|..-. ..-.=|=-||
T Consensus 104 ~dlt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 173 (310)
T 2nn3_C 104 PNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLF 173 (310)
T ss_dssp ESCCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCCceEE
Confidence 3566667666665211 11 012356788899999999988776664 66666665553100 0011234589
Q ss_pred EEecccccccccc----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhhh
Q 023458 116 YVEACESGSIFEG----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (282)
Q Consensus 116 ~iEAC~SGSmf~~----------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme~ 179 (282)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-| -+|.-...+.
T Consensus 174 fiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~----------~~~G----SwFIqaL~~~ 239 (310)
T 2nn3_C 174 FIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTRG----SWFMQALCEE 239 (310)
T ss_dssp EEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS----------SEEE----EHHHHHHHHH
T ss_pred EEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC----------CCCC----CHHHHHHHHH
Confidence 9999986443111 13333467777777766655543 1222 3343333332
Q ss_pred hccccCchhcHHHHHHHHHhhhcc
Q 023458 180 SETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 180 ~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
.. +......|.++|..|.+++..
T Consensus 240 l~-~~~~~~dl~~ilt~Vn~~V~~ 262 (310)
T 2nn3_C 240 LR-YAGTERDILTLLTFVCQKVAL 262 (310)
T ss_dssp HH-TTTTTSCHHHHHHHHHHHHHH
T ss_pred HH-hhCCCCCHHHHHHHHHHHHHH
Confidence 22 223457899999999998863
No 11
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=95.53 E-value=0.038 Score=50.43 Aligned_cols=143 Identities=12% Similarity=0.082 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+- .. .+ +-...|-++|+|.+||..|.|.--|+. +.-++|...|..-. ..-.=|=-||
T Consensus 66 ~dlt~~em~~~l~~-~~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 135 (278)
T 3od5_A 66 NDLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIF 135 (278)
T ss_dssp ESCCHHHHHHHHHH-HH------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHH-HH------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhcCCCcEE
Confidence 46788888887773 11 11 114567788888999999988776765 66666665554200 0011234589
Q ss_pred EEeccccccccccc---------------------------CCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchh
Q 023458 116 YVEACESGSIFEGV---------------------------MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCL 168 (282)
Q Consensus 116 ~iEAC~SGSmf~~~---------------------------lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~l 168 (282)
+|.||...-+-.++ +|...++++.=|+.++.-||-. +..|+
T Consensus 136 fiQACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~~~GS-- 203 (278)
T 3od5_A 136 IIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE----------TVNGS-- 203 (278)
T ss_dssp EEESCCSSBCBCEECCC---------------------CCCEETTTTEEEEESSCTTBCCEEE----------TTTEE--
T ss_pred EEecCCCCcccCCeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecC----------CCCCc--
Confidence 99999965432221 1222356666666666555543 12232
Q ss_pred hhhhhhhhhhhhccccCchhcHHHHHHHHHhhhccC
Q 023458 169 GDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNF 204 (282)
Q Consensus 169 gD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~~~ 204 (282)
+|--...+-... ......|.++|..|.+++...
T Consensus 204 --~fIq~L~~~l~~-~~~~~dl~~ilt~Vn~~V~~~ 236 (278)
T 3od5_A 204 --WYIQDLCEMLGK-YGSSLEFTELLTLVNRKVSQR 236 (278)
T ss_dssp --HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHh-hCCCCCHHHHHHHHHHHHHHH
Confidence 232222222111 124578999999999988753
No 12
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=95.41 E-value=0.034 Score=51.49 Aligned_cols=142 Identities=13% Similarity=0.149 Sum_probs=80.8
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+.++|+- .. .+ . -...|-++|||.+||..|+|.--|+ .+.-++|...|..-. ..-.=|=-||
T Consensus 114 ~dlt~~em~~~l~~-~~------~~-~-h~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlf 183 (305)
T 1f1j_A 114 NDCSCAKMQDLLKK-AS------EE-D-HTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRSKTLLEKPKLF 183 (305)
T ss_dssp ESCCHHHHHHHHHH-HH------HS-C-GGGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCcCHHHHHHHHHH-HH------Hh-h-cCCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhccChhhcCCceEE
Confidence 45677777777662 11 11 1 1235678899999999998766665 366565554443100 0001234588
Q ss_pred EEecccccccccc-----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCccchhhhhhhhhhhh
Q 023458 116 YVEACESGSIFEG-----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWME 178 (282)
Q Consensus 116 ~iEAC~SGSmf~~-----------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~~t~lgD~fS~~wme 178 (282)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-| -+|.-...+
T Consensus 184 fiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~----------~~~G----S~FiqaL~~ 249 (305)
T 1f1j_A 184 FIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS----------PGRG----SWFVQALCS 249 (305)
T ss_dssp EEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE----------TTTE----EHHHHHHHH
T ss_pred EeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC----------CCCC----CHHHHHHHH
Confidence 9999987543221 13333467777777777666643 1222 233333333
Q ss_pred hhccccCchhcHHHHHHHHHhhhcc
Q 023458 179 DSETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 179 ~~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
-... ......|.++|..|.+++..
T Consensus 250 ~l~~-~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 250 ILEE-HGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp HHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 2221 12447899999999988864
No 13
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=95.24 E-value=0.064 Score=48.62 Aligned_cols=143 Identities=17% Similarity=0.181 Sum_probs=75.2
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC-------CccCCCCCCCCCHHHHHHHHHHHH-HcC
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP-------GVLGMPNMPYVYAMEFIDVLKKKH-AAK 108 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~-------g~l~fpd~~~L~a~dL~~~l~~M~-~~~ 108 (282)
.++|.+.+..+|+--. .+ .. ...|-++|+|.+||.. |.|.--|+..+.-++|...|..-. ..-
T Consensus 66 ~dlt~~em~~~l~~~~-------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL 136 (277)
T 1nw9_B 66 GDLTAKKMVLALLELA-------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSL 136 (277)
T ss_dssp ESCCHHHHHHHHHHHH-------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTTCGGG
T ss_pred cCCCHHHHHHHHHHHH-------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccCChhH
Confidence 4677777777776211 11 11 3357788888899987 766544554455555555443100 001
Q ss_pred CCCeEEEEEecccccccccc--------------------------------------cCCCCCCEEEEeccCCCCcccc
Q 023458 109 SYKGMVIYVEACESGSIFEG--------------------------------------VMPKDLDIYVTTASNAQESSFG 150 (282)
Q Consensus 109 ~Ykk~v~~iEAC~SGSmf~~--------------------------------------~lp~~~nV~~iTAS~~~EsSya 150 (282)
.=|=-||+|+||...-+-.+ .+|...++++.=|+.++.-||-
T Consensus 137 ~gKPKlffiQACRG~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~R 216 (277)
T 1nw9_B 137 GGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWR 216 (277)
T ss_dssp TTSCEEEEEEEEC---------------------------CBCCC------------CCCCCSCSEEEEEECCCCBSSTT
T ss_pred cCCCcEEEEeccCCCcccCCceeccCCcccccccccccccccccccccccccccccccccCCCCCEEEEEcCCCCeEEEc
Confidence 22335899999985432111 1233335555556565555553
Q ss_pred ccCCCCCCCCCCCccchhhhhhhhhhhhhhccccCchhcHHHHHHHHHhhhcc
Q 023458 151 TYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSN 203 (282)
Q Consensus 151 ~~~~~~~~~~~~~~~t~lgD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~~ 203 (282)
. +.-| -+|.-...+.... ......|.++|..|.+++..
T Consensus 217 ~----------~~~G----S~fiq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 254 (277)
T 1nw9_B 217 D----------PKSG----SWYVETLDDIFEQ-WAHSEDLQSLLLRVANAVSV 254 (277)
T ss_dssp C----------TTSC----BHHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHT
T ss_pred C----------CCCC----cHHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHhh
Confidence 2 1222 2333333332221 12457899999999999864
No 14
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=95.00 E-value=0.066 Score=49.76 Aligned_cols=145 Identities=12% Similarity=0.104 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC----CccCCCCCCCCCHHHHHHHHHHHH-HcCCCC
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP----GVLGMPNMPYVYAMEFIDVLKKKH-AAKSYK 111 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~----g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Yk 111 (282)
.++|.+.+.++|+--. .+ ..+...|-++|+|.+||.. |.|.--|+..+.-++|...|..-. ..-.=|
T Consensus 104 ~dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gK 175 (316)
T 2fp3_A 104 GNVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNK 175 (316)
T ss_dssp CSCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTS
T ss_pred cCCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhhcCC
Confidence 4566666666665211 11 1121567788899999999 888776775466666555553100 000223
Q ss_pred eEEEEEecccccccccc---------------------------------cCCCCCCEEEEeccCCCCccccccCCCCCC
Q 023458 112 GMVIYVEACESGSIFEG---------------------------------VMPKDLDIYVTTASNAQESSFGTYCPGMDP 158 (282)
Q Consensus 112 k~v~~iEAC~SGSmf~~---------------------------------~lp~~~nV~~iTAS~~~EsSya~~~~~~~~ 158 (282)
=-||+|+||...-+-.+ .+|...++++.=|+.++.-||-.
T Consensus 176 PKlffiQACRG~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~iP~~aD~Li~yST~pG~vS~R~------- 248 (316)
T 2fp3_A 176 PKVLMFPFARGDEYDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYVTHRD------- 248 (316)
T ss_dssp CEEEEESCC---------------------------------------CCCCCCCCSEEEEECCCSCCCBTTT-------
T ss_pred ceEEEEecCCCCcccCCceeccCcccccccccccccccccccccccccccccCCCCCEEEEEeCCCCceeccC-------
Confidence 45899999986432111 12222345555555555444422
Q ss_pred CCCCCccchhhhhhhhhhhhhhccccCchhcHHHHHHHHHhhhccC
Q 023458 159 SPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNF 204 (282)
Q Consensus 159 ~~~~~~~t~lgD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~~~ 204 (282)
+--|-+|--...+-... ......|.++|..|.+++...
T Consensus 249 -------~~~GSwFIq~L~~~l~~-~~~~~dl~~ilt~Vn~~V~~~ 286 (316)
T 2fp3_A 249 -------LDTGSWYIQKFCQVMAD-HAHDTDLEDILKKTSEAVGNK 286 (316)
T ss_dssp -------BCHHHHHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHSS
T ss_pred -------CCCCCHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHh
Confidence 22233443333332221 124578999999999998754
No 15
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=94.01 E-value=0.26 Score=45.51 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=75.9
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCC-----CCCCHHHHHHHHHHHH-HcCCC
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNM-----PYVYAMEFIDVLKKKH-AAKSY 110 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~-----~~L~a~dL~~~l~~M~-~~~~Y 110 (282)
.++|.+.+.++|+--.. + .+-...|-++|||.+||..|.|.=-|. ..+.-++|...|..-. ..-.=
T Consensus 102 ~dlt~~em~~~l~~f~~-------~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~g 173 (302)
T 3e4c_A 102 KNLTASDMTTELEAFAH-------R-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKD 173 (302)
T ss_dssp ESCCHHHHHHHHHHHHT-------C-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTT
T ss_pred eCCCHHHHHHHHHHHHh-------h-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhhcC
Confidence 46777777777762110 1 111234668888999999986543332 3355555555553200 00023
Q ss_pred CeEEEEEeccccccccccc--------------------------CCCCCCEEEEeccCCCCccccccCCCCCCCCCCCc
Q 023458 111 KGMVIYVEACESGSIFEGV--------------------------MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEY 164 (282)
Q Consensus 111 kk~v~~iEAC~SGSmf~~~--------------------------lp~~~nV~~iTAS~~~EsSya~~~~~~~~~~~~~~ 164 (282)
|=-||+|+||...-+-..+ +|...++++.=|+.++.-||-. +..
T Consensus 174 KPKlffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~----------~~~ 243 (302)
T 3e4c_A 174 KPKVIIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH----------PTM 243 (302)
T ss_dssp SCEEEEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSS----------TTC
T ss_pred CccEEEEECCCCCCCCcceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecC----------CCC
Confidence 4458999999975542111 1222355555565666555533 122
Q ss_pred cchhhhhhhhhhhhhhccccCchhcHHHHHHHHHhhhc
Q 023458 165 ITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTS 202 (282)
Q Consensus 165 ~t~lgD~fS~~wme~~~~~~~~~~Tl~~~f~~vk~~t~ 202 (282)
|-+|.-...+-.... .....|.++|..|...+.
T Consensus 244 ----GSwFIqaL~~~l~~~-~~~~dl~~il~~V~~~v~ 276 (302)
T 3e4c_A 244 ----GSVFIGRLIEHMQEY-ACSCDVEEIFRKVRFSFE 276 (302)
T ss_dssp ----CCHHHHHHHHHHHHH-TTTSCHHHHHHHHHHHTS
T ss_pred ----CcHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHh
Confidence 223333333322211 135689999999998865
No 16
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=92.60 E-value=0.14 Score=43.87 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCC-----CCCCHHHHHHHHHHHH-HcCCC
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNM-----PYVYAMEFIDVLKKKH-AAKSY 110 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~-----~~L~a~dL~~~l~~M~-~~~~Y 110 (282)
.++|.+.+...|+-=. .+ .+-...|-+++||.+||..|.|.-.|. +.+.-++|...|..-. ..-.=
T Consensus 85 ~dlt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~g 156 (178)
T 2h54_A 85 KNLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKD 156 (178)
T ss_dssp ESCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTT
T ss_pred cCCCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhhcC
Confidence 4567777777776210 01 111345678888889999987765565 2355555555554210 00012
Q ss_pred CeEEEEEecccccc
Q 023458 111 KGMVIYVEACESGS 124 (282)
Q Consensus 111 kk~v~~iEAC~SGS 124 (282)
|--||+|+||..+-
T Consensus 157 KPKlffiqACRg~~ 170 (178)
T 2h54_A 157 KPKVIIIQACRGDS 170 (178)
T ss_dssp SCEEEEEESCSSSB
T ss_pred CceEEEEECCCCCC
Confidence 45689999999854
No 17
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=86.93 E-value=1.8 Score=39.25 Aligned_cols=78 Identities=8% Similarity=0.023 Sum_probs=50.3
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCC--CCCHHHHHHHHHHHH-HcCCCCeE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMP--YVYAMEFIDVLKKKH-AAKSYKGM 113 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~--~L~a~dL~~~l~~M~-~~~~Ykk~ 113 (282)
.++|.+.+..+|+--.. + .+-...|-+++++.+||..|.|.=-|+. .+.-++|...|..-. ..-.=|=-
T Consensus 74 ~dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPK 145 (272)
T 3h11_A 74 LHLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPK 145 (272)
T ss_dssp ESCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCE
T ss_pred eCCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCc
Confidence 56788999888873211 0 1124578899999999999977655654 366666666664210 00123446
Q ss_pred EEEEecccc
Q 023458 114 VIYVEACES 122 (282)
Q Consensus 114 v~~iEAC~S 122 (282)
||+|.||..
T Consensus 146 lffiQACRG 154 (272)
T 3h11_A 146 MFFIQNYVV 154 (272)
T ss_dssp EEEEEEEEC
T ss_pred EEEEECCCC
Confidence 899999985
No 18
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=81.31 E-value=0.75 Score=38.88 Aligned_cols=81 Identities=15% Similarity=0.186 Sum_probs=50.8
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+--. .+ .+-...|-.+|++.+||..|.|.-.|+..+.-++|...|.--. ..-.=|=-||
T Consensus 78 ~dlt~~em~~~l~~~~-------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlf 149 (167)
T 1pyo_A 78 CDQTAQEMQEKLQNFA-------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMF 149 (167)
T ss_dssp ESCCHHHHHHHHHHHH-------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHhh-------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEE
Confidence 4667777777766211 00 0113457889999999999988877776577677766664200 0011234589
Q ss_pred EEeccccccc
Q 023458 116 YVEACESGSI 125 (282)
Q Consensus 116 ~iEAC~SGSm 125 (282)
+|.||...-+
T Consensus 150 fiQACRG~~~ 159 (167)
T 1pyo_A 150 FIQACRGDET 159 (167)
T ss_dssp EEESCSSSBC
T ss_pred EEECCCCCCC
Confidence 9999987543
No 19
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=76.62 E-value=0.98 Score=38.00 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=51.0
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+--. .+ .-...|-+++++.+||..|.|.-.|+..+.-++|...|..-. ..-.=|=-||
T Consensus 75 ~dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlF 145 (164)
T 1qtn_A 75 DDCTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVF 145 (164)
T ss_dssp ESCCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEE
Confidence 4667777777776211 01 123467788999999999988887876577677776664210 0011234589
Q ss_pred EEeccccccc
Q 023458 116 YVEACESGSI 125 (282)
Q Consensus 116 ~iEAC~SGSm 125 (282)
+|.||...-.
T Consensus 146 fiQACRG~~~ 155 (164)
T 1qtn_A 146 FIQACQGDNY 155 (164)
T ss_dssp EEESCSSSBC
T ss_pred EEECCCCCCc
Confidence 9999997543
No 20
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=71.38 E-value=2.3 Score=36.40 Aligned_cols=79 Identities=11% Similarity=0.157 Sum_probs=47.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+- .. .+ .-...|-++|.+..||..|.|.--|+. +.-++|...|.--. ..-.=|=-||
T Consensus 89 ~dlt~~em~~~l~~-~~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~gKPKlF 158 (179)
T 3p45_A 89 NDLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIF 158 (179)
T ss_dssp ESCCHHHHHHHHHH-HH------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHH-Hh------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhCCCCcEE
Confidence 35677777777762 11 11 123568899999999999988887776 76666666664210 0112244689
Q ss_pred EEeccccccc
Q 023458 116 YVEACESGSI 125 (282)
Q Consensus 116 ~iEAC~SGSm 125 (282)
+|.||...-+
T Consensus 159 fIQACRG~~~ 168 (179)
T 3p45_A 159 IIQACRGNQH 168 (179)
T ss_dssp EEECC-----
T ss_pred EEECCCCCCC
Confidence 9999997543
No 21
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=66.40 E-value=1.5 Score=36.07 Aligned_cols=77 Identities=12% Similarity=0.186 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHH-HHcCCCCeEEEE
Q 023458 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKK-HAAKSYKGMVIY 116 (282)
Q Consensus 38 ~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M-~~~~~Ykk~v~~ 116 (282)
++|.+.+..+|+--. .+ .-...|-.++++.+||..|.|.-.|+ .+.-++|...|.-- -..-.=|=-+|+
T Consensus 62 dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~gKPKlff 131 (146)
T 2dko_A 62 DLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFI 131 (146)
T ss_dssp SCCHHHHHHHHHHHH-------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEE
T ss_pred CCCHHHHHHHHHHHH-------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcCCCeEEE
Confidence 566677666665211 01 11345789999999999998877777 46666665555310 000122445889
Q ss_pred Eecccccc
Q 023458 117 VEACESGS 124 (282)
Q Consensus 117 iEAC~SGS 124 (282)
|.||...-
T Consensus 132 iQACRG~~ 139 (146)
T 2dko_A 132 IQACRGTE 139 (146)
T ss_dssp EESCCSSB
T ss_pred EECCCCCC
Confidence 99998754
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=56.30 E-value=3.1 Score=35.35 Aligned_cols=78 Identities=9% Similarity=0.136 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HcCCCCeEEE
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~-~~~~Ykk~v~ 115 (282)
.++|.+.+..+|+-- . .+ .-...|-+++++.+||..|.|.-.|+. +.-++|...|.--. ..-.=|=-||
T Consensus 89 ~dlt~~em~~~l~~~-s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~gKPKlF 158 (173)
T 2ql9_A 89 NDCSCAKMQDLLKKA-S------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLEKPKLF 158 (173)
T ss_dssp ESCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHH-H------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcCCCeEE
Confidence 467777777777621 1 11 113457788999999999988777774 55555554442100 0012244588
Q ss_pred EEecccccc
Q 023458 116 YVEACESGS 124 (282)
Q Consensus 116 ~iEAC~SGS 124 (282)
+|.||...-
T Consensus 159 fIQACRG~~ 167 (173)
T 2ql9_A 159 FIQACRGTE 167 (173)
T ss_dssp EEESCCSSB
T ss_pred EEECCCCCC
Confidence 999998754
No 23
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=26.80 E-value=20 Score=31.70 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=17.2
Q ss_pred CceecCCCCCeEEEEEecCCCC
Q 023458 60 GKVVNSKANDRIFIFYSDHGGP 81 (282)
Q Consensus 60 ~kvl~S~~~D~VFiY~tgHGg~ 81 (282)
||+|+.=+++.|+||.+|||.+
T Consensus 324 g~~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 324 PEIIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHHHTCCTTEEEEEECSSBCC
T ss_pred HHHHHhcCCCCEEEEEccCCCC
Confidence 5666655578899999999964
No 24
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=25.58 E-value=32 Score=32.98 Aligned_cols=47 Identities=19% Similarity=0.309 Sum_probs=29.7
Q ss_pred EEEEEecCCCCCccCCCCCCCCCHHHHHHHHHHHHHcCCCCeEEEEEecccccccc
Q 023458 71 IFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKHAAKSYKGMVIYVEACESGSIF 126 (282)
Q Consensus 71 VFiY~tgHGg~g~l~fpd~~~L~a~dL~~~l~~M~~~~~Ykk~v~~iEAC~SGSmf 126 (282)
.||.|.|||++..+... . +...|+.. + .+..+-=|++.=||..|.+.
T Consensus 204 ~ivnY~GHG~~~~w~~e--~-~~~~dv~~----l--~N~~~lPl~it~tC~~g~Fd 250 (435)
T 1cvr_A 204 SLVNYTGHGSETAWGTS--H-FGTTHVKQ----L--TNSNQLPFIFDVACVNGDFL 250 (435)
T ss_dssp SEEEEESCBCSSBBTTT--C-CBTTTGGG----C--CCTTCCCEEEEESSSTTCTT
T ss_pred eEEEEecCCCccccccc--c-cChhhHHh----h--cCCCCCcEEEEeECcCCCCC
Confidence 68999999998755432 2 44443222 2 12234447788999999975
No 25
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=23.41 E-value=47 Score=25.08 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=26.2
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEEecCCCC
Q 023458 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP 81 (282)
Q Consensus 37 ~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFiY~tgHGg~ 81 (282)
.+.|...|+.+|+- .|+-.+++.||+|....-.|
T Consensus 28 ~~~tv~~~~~~lRk-----------rL~l~~~~alFlyVnn~~~P 61 (91)
T 4gdk_A 28 RTRTIQGLIDFIKK-----------FLKLVASEQLFIYVNQSFAP 61 (91)
T ss_dssp TTCBHHHHHHHHHH-----------HTTCCSSSCCEEEETTTBCC
T ss_pred CCCCHHHHHHHHHH-----------HhCCCCCCeEEEEECCccCC
Confidence 47899999999982 25668899999998654433
Done!