BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023462
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0JC27|NLP2_ORYSJ Protein NLP2 OS=Oryza sativa subsp. japonica GN=NLP2 PE=2 SV=2
Length = 936
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 23 STSTKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
ST+ K++S D + KYFS L DAA LGVC + LK+ICR +G+ RWP RK
Sbjct: 562 STAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRWPSRKI 612
>sp|Q9SFW8|NLP5_ARATH Protein NLP5 OS=Arabidopsis thaliana GN=NLP5 PE=2 SV=1
Length = 808
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 5 LSLHNNSSISKAAASSSIST-----STKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKI 59
+S++ N++ S A+ + ++ + K+++ D + +YF+ L DAA +GVC + LK+I
Sbjct: 521 VSVNENNTFSSASGFNRVTEKKRTKAEKNITLDVLRQYFAGSLKDAAKSIGVCPTTLKRI 580
Query: 60 CRDNGLDRWPYRKFLS-GKSIEDIKK 84
CR +G+ RWP RK G S++ I++
Sbjct: 581 CRQHGIQRWPSRKIKKVGHSLQKIQR 606
>sp|Q9LE38|NLP4_ARATH Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1
Length = 844
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLS-GKSIEDIKK 84
K+++ D + +YF+ L DAA ++GVC + LK+ICR +G+ RWP RK G S++ I++
Sbjct: 557 KTITLDVLRQYFAGSLKDAAKNIGVCPTTLKRICRQHGIQRWPSRKIKKVGHSLQKIQR 615
>sp|O81791|RKD5_ARATH Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1
Length = 370
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 29 LSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLSGKS-IEDIKKYAA 87
LS +++SKYF L + +A+ +L V ++VLKK CR+ G+ RWP+RK S I D+++ A
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301
Query: 88 REKSKELAELSKIARK 103
+++ K A +A+K
Sbjct: 302 KQQEKNEAAAMAVAKK 317
>sp|Q10S83|NLP1_ORYSJ Protein NLP1 OS=Oryza sativa subsp. japonica GN=NLP1 PE=2 SV=1
Length = 942
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
K++S D+ K+F+ L +AA +LGVC + LK+ICR +G++RWP RK
Sbjct: 621 KTVSLQDLRKHFAGSLKEAAKNLGVCPTTLKRICRQHGINRWPSRKI 667
>sp|Q9M1B0|NLP9_ARATH Protein NLP9 OS=Arabidopsis thaliana GN=NLP9 PE=2 SV=1
Length = 894
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 23 STSTKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
S++ K++S + + +YFS L DAA LGVC + LK+ICR +G+ RWP RK
Sbjct: 530 SSTEKNVSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKI 580
>sp|Q84TH9|NLP7_ARATH Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2
Length = 959
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
K++S D + +YF+ L DAA LGVC + +K+ICR +G+ RWP RK
Sbjct: 590 KTISLDVLQQYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKI 636
>sp|Q9M9U9|RKD1_ARATH Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1
Length = 269
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 20 SSISTSTKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLS-GKS 78
SS S S K+LS + IS YF +P++ AA L + +++LKK CR+ G+ RWP+RK +S K
Sbjct: 120 SSCSVS-KTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKL 178
Query: 79 IEDIKKYAARE 89
I ++K+ E
Sbjct: 179 ISNVKELEKME 189
>sp|Q9SVF1|NLP3_ARATH Protein NLP3 OS=Arabidopsis thaliana GN=NLP3 PE=2 SV=1
Length = 767
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
K ++ D + ++F+ L DAA ++GVC + LK+ICR NG+ RWP RK
Sbjct: 497 KDITLDTLRQHFAGSLKDAAKNIGVCPTTLKRICRQNGISRWPSRKI 543
>sp|Q9CA66|RKD2_ARATH Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1
Length = 298
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 21 SISTSTKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLSGKS-- 78
+ S++ +LS + +S+YF +P++ AA L V +++LK+ CR+ G+ RWP+RK +S +
Sbjct: 127 TTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLI 186
Query: 79 --IEDIKKYAAREKSKELAELSKIARK 103
+++++K E +++L + ++ K
Sbjct: 187 SNVKELQKMEGEENAEKLQDALEMLEK 213
>sp|Q5NB82|NLP3_ORYSJ Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1
Length = 938
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
K++S D + +YFS L +AA LGVC + +K+ICR +G+ RWP RK
Sbjct: 597 KTISLDVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKI 643
>sp|Q8RWY4|NLP6_ARATH Protein NLP6 OS=Arabidopsis thaliana GN=NLP6 PE=2 SV=2
Length = 841
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
K++S + + +YF+ L DAA LGVC + +K+ICR +G+ RWP RK
Sbjct: 555 KTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKI 601
>sp|Q8H111|NLP1_ARATH Protein NLP1 OS=Arabidopsis thaliana GN=NLP1 PE=2 SV=1
Length = 909
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLSGKSIEDIKKYA 86
K++ + + +YF+ L DAA +GVC + LK+ICR +G+ RWP RK IKK
Sbjct: 607 KTIGLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIMRWPSRK---------IKKVG 657
Query: 87 AREKSKELAELSKIARKSGFQPLSNETSKLHGVTSPPNLQQQGSKNSPVGQP-HVLLNAN 145
K +L S + Q S TS + PN+ G QP H LNA
Sbjct: 658 HSLKKLQLVMDSVQGAQGSIQLDSFYTS--FPELNSPNMSSNGPSLKSNEQPSH--LNAQ 713
Query: 146 LTKGIMA 152
GIMA
Sbjct: 714 TDNGIMA 720
>sp|Q7X9B9|NLP2_ARATH Protein NLP2 OS=Arabidopsis thaliana GN=NLP2 PE=2 SV=3
Length = 963
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 27 KSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRK 72
K++ + + +YF+ L DAA +GVC + LK+ICR +G+ RWP RK
Sbjct: 647 KTIGLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRK 692
>sp|Q9LVU8|RKD4_ARATH Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1
Length = 256
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 29 LSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLSGKS-IEDIKKYAA 87
L +I ++F P+ AA L V ++VLKK CR+ G+ RWP+RK S S I+++K
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207
Query: 88 REKSKELAELSKIARKSGFQPLSNETSKLHGVTSPPNLQQQGS 130
E+ K L E + + LS+ T KL N +++ S
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKS 250
>sp|Q9FGD1|RKD3_ARATH Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1
Length = 277
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 28 SLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLSGKSI 79
++S + + +YF +P++ AA L + V++LKK CR+ G+ RWP+RK S ++
Sbjct: 158 NMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNAL 209
>sp|O22864|NLP8_ARATH Protein NLP8 OS=Arabidopsis thaliana GN=NLP8 PE=2 SV=1
Length = 947
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 13/64 (20%)
Query: 23 STSTKSLSFDDISKYFSLPLSDAANHLG-------------VCVSVLKKICRDNGLDRWP 69
ST+ K++S + ++FS L DAA LG C + LK+ICR +G+ RWP
Sbjct: 585 STTEKNVSLSALQQHFSGSLKDAAKSLGGETSAYFQAWVYFFCPTTLKRICRQHGIMRWP 644
Query: 70 YRKF 73
RK
Sbjct: 645 SRKI 648
>sp|Q3AC76|RNH2_CARHZ Ribonuclease HII OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=rnhB PE=3 SV=1
Length = 231
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 1 MMSSLSLHNNSSISKAAASSSISTSTKSLSFDDI------SKYFSLPLSDAANHLGVCVS 54
++ L+++ + + AA S+S ++L D + K S+ +D + C S
Sbjct: 105 LIDRLNIYQATKFAFKAALDSLSIKPEALILDALKLTGFSGKQVSMVKADEISFAVACAS 164
Query: 55 VLKKICRDNGLDRWPYRKFLSGKSIEDIKKYAAREKSKELAEL--SKIARKSGFQPLSNE 112
+L K+ RD +++ Y K G + K Y RE + L L S I RKS F+P+ +
Sbjct: 165 ILAKVIRDKIMEQ--YDKDFPGYGFKKNKGYLTREHREALELLGPSPIHRKS-FEPIKSF 221
Query: 113 TSKL 116
+L
Sbjct: 222 YGQL 225
>sp|Q9VWR8|DPY19_DROME Protein dpy-19 homolog OS=Drosophila melanogaster GN=CG6659 PE=1
SV=1
Length = 872
Score = 32.3 bits (72), Expect = 4.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 192 DEEDKQAEAKADKESATQATGNEKSGNGETESNVDP 227
+EEDK EA+++ + Q G SG ETES DP
Sbjct: 542 EEEDKDPEAESESKKKNQEPG---SGETETESAADP 574
>sp|P97814|PPIP1_MOUSE Proline-serine-threonine phosphatase-interacting protein 1 OS=Mus
musculus GN=Pstpip1 PE=1 SV=1
Length = 415
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 77 KSIEDIKKYAAREKSKELAELSKIARKSGFQPLSNETSKLHGVTSPPNLQQQGSKNSPVG 136
K +E++ + A+ + + EL +IARK+G Q N TS +L+QQ VG
Sbjct: 37 KDVEELLRQRAQAEERYGKELVQIARKAGGQTEMNSLR-----TSFDSLKQQTEN---VG 88
Query: 137 QPHVLLNANLTKGIMALDEFK 157
H+ L L + + +L+EF+
Sbjct: 89 SAHIQLALALREELRSLEEFR 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,478,742
Number of Sequences: 539616
Number of extensions: 4404418
Number of successful extensions: 17433
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 16972
Number of HSP's gapped (non-prelim): 459
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)