Your job contains 1 sequence.
>023463
MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS
AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK
YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECS
ENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEH
LRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023463
(282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094438 - symbol:LOH1 "LAG One Homologue 1" sp... 830 8.2e-83 1
TAIR|locus:2056558 - symbol:AT2G28480 species:3702 "Arabi... 376 1.1e-34 1
TAIR|locus:2091458 - symbol:AT3G27550 species:3702 "Arabi... 337 4.5e-34 2
TAIR|locus:2123276 - symbol:AT4G13070 species:3702 "Arabi... 358 8.5e-33 1
TAIR|locus:2094558 - symbol:CFM3A "CRM family member 3A" ... 256 8.8e-21 1
TAIR|locus:2094997 - symbol:EMB1865 "embryo defective 186... 240 4.3e-19 1
TAIR|locus:2096662 - symbol:CFM2 "CRM family member 2" sp... 229 8.4e-18 1
TAIR|locus:2181372 - symbol:CRS1 "ortholog of maize chlor... 192 3.7e-13 1
>TAIR|locus:2094438 [details] [associations]
symbol:LOH1 "LAG One Homologue 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042761 "very
long-chain fatty acid biosynthetic process" evidence=IGI]
[GO:0050291 "sphingosine N-acyltransferase activity" evidence=IGI]
InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295 SMART:SM01103
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
EMBL:AB025639 GO:GO:0042761 Gene3D:3.30.110.60 SUPFAM:SSF75471
GO:GO:0050291 KO:K01148 EMBL:AK176804 IPI:IPI00542084
RefSeq:NP_189171.2 UniGene:At.37388 ProteinModelPortal:Q67XL4
SMR:Q67XL4 PaxDb:Q67XL4 PRIDE:Q67XL4 EnsemblPlants:AT3G25440.1
GeneID:822128 KEGG:ath:AT3G25440 TAIR:At3g25440 eggNOG:NOG254408
HOGENOM:HOG000240887 InParanoid:Q67XL4 OMA:RRYIPRL PhylomeDB:Q67XL4
ProtClustDB:CLSN2681576 Genevestigator:Q67XL4 Uniprot:Q67XL4
Length = 444
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 179/289 (61%), Positives = 210/289 (72%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFY+LKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+V++KTF+
Sbjct: 171 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 230
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EVKEIA ELARLTGGIVL++HE NTIIMYRGKNY QPPTEIMSPRITL RKKALDKSK
Sbjct: 231 DEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKC 290
Query: 122 RDGLRAVKKYIPKXXXXXXXXXXXXXTRSENRSDAAEDVQ--NTELDKPDFGSIPSMMEC 179
RD LRAV+KYIP+ T+ + + +D Q + EL K I EC
Sbjct: 291 RDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKK----IIERSEEC 346
Query: 180 SENDPTTESL---MASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHED 236
E++ + +A+DS DLSDIFETDSE E + K E RPL+L++F+KFP N+ E ED
Sbjct: 347 LEDEQEEDEAGLELATDS-DLSDIFETDSELE-DAKTE-RPLFLEEFEKFPAINNREDED 403
Query: 237 FEEHLRQISIDSRNAKSLGKDED---SSHFDEVDKMFLRAASLLKKQKR 282
F D AKS G++ D S +FDEVDKMFLRAA LLKK++R
Sbjct: 404 FG--------DLGKAKSEGEENDDDKSPNFDEVDKMFLRAAFLLKKKRR 444
>TAIR|locus:2056558 [details] [associations]
symbol:AT2G28480 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
EMBL:AC006587 Gene3D:3.30.110.60 SUPFAM:SSF75471
HOGENOM:HOG000241798 EMBL:BT011753 EMBL:AK226713 IPI:IPI00526248
PIR:D84685 RefSeq:NP_180415.1 UniGene:At.50106
ProteinModelPortal:Q9SK10 SMR:Q9SK10 EnsemblPlants:AT2G28480.1
GeneID:817396 KEGG:ath:AT2G28480 TAIR:At2g28480 eggNOG:NOG245924
InParanoid:Q9SK10 OMA:ANRKDPR PhylomeDB:Q9SK10
ProtClustDB:CLSN2913133 Genevestigator:Q9SK10 Uniprot:Q9SK10
Length = 372
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 80/212 (37%), Positives = 121/212 (57%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P +T EE FY KMG+K NYVP+GRRG++ GVILNMHLHWKKH+T+KVI +V
Sbjct: 161 PHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQV 220
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
++ A ELA+L+GG+ + I ++TII YRGK Y QP ++MSP TLS+K+A +KSKY
Sbjct: 221 QQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQP--QVMSPIDTLSKKRAYEKSKYEQS 278
Query: 125 LRAVKKYIPKXXXXXXXXXXXXXTRSE-NRSDAAEDVQNTELDKPDFGSIPSMMECSEND 183
L +V+ +I + N + + ++ + + CS+ D
Sbjct: 279 LESVRHFIAIAEKELELYYRHVALYDDPNNRNPLSILDDSPSESRQHHENEFFLSCSDTD 338
Query: 184 PTTESLMASDSEDLSDIFETDSETETEEKAEL 215
++E + E+L ++ + S + + K EL
Sbjct: 339 SSSED--EDEDEELCEL-DNGSSSSSSAKEEL 367
>TAIR|locus:2091458 [details] [associations]
symbol:AT3G27550 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:AB025626 IPI:IPI00525575
RefSeq:NP_189392.1 UniGene:At.37034 ProteinModelPortal:Q9LT57
SMR:Q9LT57 EnsemblPlants:AT3G27550.1 GeneID:822377
KEGG:ath:AT3G27550 TAIR:At3g27550 eggNOG:NOG248894
HOGENOM:HOG000241218 InParanoid:Q9LT57 OMA:RMRKESG PhylomeDB:Q9LT57
ProtClustDB:CLSN2685015 Genevestigator:Q9LT57 Uniprot:Q9LT57
Length = 491
Score = 337 (123.7 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 65/132 (49%), Positives = 92/132 (69%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+ T E+ F K+G K KNYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 87 HDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 146
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A+ +ARL+GG+V+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 147 KIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI--PVNTLTKRKALFKARFE 204
Query: 123 DGLRAVKKYIPK 134
L + K I K
Sbjct: 205 QALESQKLNIKK 216
Score = 49 (22.3 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
Identities = 21/83 (25%), Positives = 34/83 (40%)
Query: 184 PTTESLMASDSEDLSDIFETDSETETEEKAELRPL-YLDQFDKFPVQNDEEHEDFEEHLR 242
P + + SD + LSD+ T ++E EE A P Y+ D +N + R
Sbjct: 406 PRPRAQVRSDDDVLSDLDNTMWDSEDEEDAP--PANYISSSDDDEDENRTVSASSSKQSR 463
Query: 243 QISIDSRNAKSLGKDEDSSHFDE 265
+ SR+ + K + DE
Sbjct: 464 FRNNSSRDGINNSKSKSGKQRDE 486
Score = 43 (20.2 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 149 RSENRSD--AAEDVQNTELDKPDFGSIP-SMMECSENDPTTESLMASDSEDLSDIFETDS 205
R++ RSD D+ NT D D P + S +D E+ S S F +S
Sbjct: 409 RAQVRSDDDVLSDLDNTMWDSEDEEDAPPANYISSSDDDEDENRTVSASSSKQSRFRNNS 468
Query: 206 ETE 208
+
Sbjct: 469 SRD 471
Score = 40 (19.1 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 182 NDPTTESLMA-SDSEDLSDIFETDSETE 208
ND T S +DS+D D E DSE +
Sbjct: 347 NDRDTHSQRRPNDSDDDDDDGELDSEDD 374
>TAIR|locus:2123276 [details] [associations]
symbol:AT4G13070 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:BT022043 EMBL:BT029203
EMBL:AK175251 EMBL:AK176471 EMBL:AK176848 IPI:IPI00516587
RefSeq:NP_193043.2 UniGene:At.43316 ProteinModelPortal:Q67YJ7
SMR:Q67YJ7 EnsemblPlants:AT4G13070.1 GeneID:826921
KEGG:ath:AT4G13070 TAIR:At4g13070 eggNOG:NOG314366
HOGENOM:HOG000241798 InParanoid:Q67YJ7 OMA:NELRFYR PhylomeDB:Q67YJ7
ProtClustDB:CLSN2918582 Genevestigator:Q67YJ7 Uniprot:Q67YJ7
Length = 343
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 70/133 (52%), Positives = 94/133 (70%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPE LT EE Y + G K KN+V VGRRG++ GV+LN+HLHWKKH+T+KVI K +
Sbjct: 177 YDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKP 236
Query: 63 -EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV+++ NTI++YRGKNY +P E+MSP TLS+ KAL+K +Y
Sbjct: 237 GQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRP--EVMSPVDTLSKDKALEKYRY 294
Query: 122 RDGLRAVKKYIPK 134
L ++I K
Sbjct: 295 EQSLEHTSEFIEK 307
>TAIR|locus:2094558 [details] [associations]
symbol:CFM3A "CRM family member 3A" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0000373 "Group II
intron splicing" evidence=IMP] [GO:0048316 "seed development"
evidence=IGI] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 GO:GO:0009507 EMBL:CP002686 GO:GO:0003723
GO:GO:0048316 Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373
IPI:IPI00537962 RefSeq:NP_188947.2 UniGene:At.6125 UniGene:At.71222
ProteinModelPortal:F4J2U9 SMR:F4J2U9 PRIDE:F4J2U9
EnsemblPlants:AT3G23070.1 GeneID:821881 KEGG:ath:AT3G23070
OMA:VEILRHE Uniprot:F4J2U9
Length = 881
Score = 256 (95.2 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 64/212 (30%), Positives = 110/212 (51%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K+IVK + +
Sbjct: 634 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 693
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK++A L +GGI++ I + II+YRG++Y +P ++ P+ L+++KAL +S
Sbjct: 694 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPT--MLRPKNLLTKRKALARSI 751
Query: 121 YRDGLRAVKKYIPKXXXXXXXXXXXXXTRSENRSDAAEDVQNTELDKPDFGSIPSMMECS 180
+ K+I + E +D ++ +LD S E
Sbjct: 752 ELQRREGLLKHI-STMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSDEETDEED 810
Query: 181 ENDPTTESLMASDSEDLSDIFETD-SETETEE 211
++D E+ + + +I + SETE ++
Sbjct: 811 DDDAFPETYAEGEDGEEGEILAGELSETEDKD 842
>TAIR|locus:2094997 [details] [associations]
symbol:EMB1865 "embryo defective 1865" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IDA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 GO:GO:0009737 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB026658
Gene3D:3.30.110.60 SUPFAM:SSF75471 HOGENOM:HOG000241574
EMBL:AY063908 IPI:IPI00520842 RefSeq:NP_188468.1 UniGene:At.20890
ProteinModelPortal:Q9LS51 SMR:Q9LS51 STRING:Q9LS51 PaxDb:Q9LS51
PRIDE:Q9LS51 EnsemblPlants:AT3G18390.1 GeneID:821368
KEGG:ath:AT3G18390 TAIR:At3g18390 eggNOG:NOG326934
InParanoid:Q9LS51 OMA:DMKTAHE PhylomeDB:Q9LS51
ProtClustDB:CLSN2684381 ArrayExpress:Q9LS51 Genevestigator:Q9LS51
Uniprot:Q9LS51
Length = 848
Score = 240 (89.5 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 68/203 (33%), Positives = 108/203 (53%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E+++ EE F K+G K K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 648 YDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQA 707
Query: 63 EVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V+E A L +GG+++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 708 FVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPIS--LRPRNLLTKAKALKRS 765
Query: 120 KYRDGLRAVKKYIPKXXXXXXXXXXXXXTRSENRSDAAEDVQNTELDKPDFGSIPSMMEC 179
A+ ++I + S+N S + + +N E D D +E
Sbjct: 766 IAMQRHEALSQHISELERTIEQMQSQLT--SKNPSYSESEWENDEDDDDDEEEEKDDVED 823
Query: 180 SEND--PTT-ESLMASDSE-DLS 198
+E+D T ES ++S E D+S
Sbjct: 824 NESDWDETDGESAISSIEEADMS 846
>TAIR|locus:2096662 [details] [associations]
symbol:CFM2 "CRM family member 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;RCA] [GO:0000372 "Group I
intron splicing" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 EMBL:CP002686 GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373 GO:GO:0000372
EMBL:AY136347 EMBL:BT010594 IPI:IPI00518423 RefSeq:NP_186786.2
UniGene:At.28082 ProteinModelPortal:Q8L7C2 SMR:Q8L7C2 IntAct:Q8L7C2
STRING:Q8L7C2 PaxDb:Q8L7C2 PRIDE:Q8L7C2 EnsemblPlants:AT3G01370.1
GeneID:821288 KEGG:ath:AT3G01370 TAIR:At3g01370 eggNOG:NOG300241
InParanoid:Q8L7C2 OMA:ASMIKLW PhylomeDB:Q8L7C2
ProtClustDB:CLSN2690653 ArrayExpress:Q8L7C2 Genevestigator:Q8L7C2
Uniprot:Q8L7C2
Length = 1011
Score = 229 (85.7 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 70/282 (24%), Positives = 129/282 (45%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I +S E
Sbjct: 575 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEA 634
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
++A L +GGI++ + + II+YRGKNY +P + + P+ LS+++AL +S
Sbjct: 635 AHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERP--QCLRPQTLLSKREALKRSV 692
Query: 121 YRDGLRAVKKYIPKXXXXXXXXXXXXXTRSENRSDAAEDVQNTELDKPDFGSIPSMMECS 180
+++K ++ K S ++ D +++ + + + + +
Sbjct: 693 EAQRRKSLKLHVLKLSNNIEELNRQLVEDSAT-NETWSDGESSNMMVEE----ETENQHT 747
Query: 181 ENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEH 240
E + E + S DLS + E + + E+ PL + Q DE +
Sbjct: 748 EPEKAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQE---YQEDESESASSQR 804
Query: 241 LRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
S+DS S+ + S++ L S L ++
Sbjct: 805 HEGNSLDSTANLSVFAETGSANASSFHDRSLPHNSFLNANRK 846
>TAIR|locus:2181372 [details] [associations]
symbol:CRS1 "ortholog of maize chloroplast splicing
factor CRS1" species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0000373 "Group II intron splicing" evidence=IDA]
InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295 SMART:SM01103
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0030529 Gene3D:3.30.110.60
SUPFAM:SSF75471 GO:GO:0000373 EMBL:AL391148 IPI:IPI00521200
PIR:T51488 RefSeq:NP_197122.2 UniGene:At.50459 UniGene:At.54863
ProteinModelPortal:Q9LF10 SMR:Q9LF10 PaxDb:Q9LF10 PRIDE:Q9LF10
GeneID:831476 KEGG:ath:AT5G16180 TAIR:At5g16180 eggNOG:NOG322716
HOGENOM:HOG000241574 InParanoid:Q9LF10 OMA:KIERSNQ
ArrayExpress:Q9LF10 Genevestigator:Q9LF10 Uniprot:Q9LF10
Length = 720
Score = 192 (72.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 47/131 (35%), Positives = 76/131 (58%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIV--KTFSA 61
D EILT EE ++G K + + +GRRG++ GV+ +H HWK + KVI K FS
Sbjct: 568 DIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFS- 626
Query: 62 EEVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
V A L + G+++ I E + I++YRGKNY +P +++M+ + L+++KAL +
Sbjct: 627 -RVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNL-LTKRKALQR 684
Query: 119 SKYRDGLRAVK 129
S L ++K
Sbjct: 685 SVVMQRLGSLK 695
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 282 269 0.00096 114 3 11 23 0.40 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 591 (63 KB)
Total size of DFA: 192 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.19u 0.11s 28.30t Elapsed: 00:00:02
Total cpu time: 28.19u 0.11s 28.30t Elapsed: 00:00:02
Start: Fri May 10 03:42:55 2013 End: Fri May 10 03:42:57 2013