BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023463
(282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/296 (70%), Positives = 244/296 (82%), Gaps = 16/296 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG KCKNYVP+GRRGIYQGVILNMHLHWKKHQTL+V+VKTFS
Sbjct: 37 THDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSP 96
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELARLTGGIVL+IHEENTIIMYRGKNY+QPPTEIMSPRITLSRKKALDKSKY
Sbjct: 97 EEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKY 156
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMM---- 177
RDGLRAV+KYIP+LE +LELL+AQA+ ++EN+++A ED QN +D + I ++
Sbjct: 157 RDGLRAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQNANIDSINSQGISNLQPENS 216
Query: 178 -----------ECSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKF 226
E SE + T+S S SE LSDIFE+DS+T+T+EKAE + LYL++F+KF
Sbjct: 217 DKLRELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKEKAE-QLLYLNEFEKF 275
Query: 227 PVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
PV++D E EDFEEHLRQIS DSR AKSL KD D DEVD+MFLRAASLLKK++R
Sbjct: 276 PVESDGEPEDFEEHLRQISADSRKAKSLEKDADLPQLDEVDQMFLRAASLLKKKRR 331
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/296 (70%), Positives = 244/296 (82%), Gaps = 16/296 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG KCKNYVP+GRRGIYQGVILNMHLHWKKHQTL+V+VKTFS
Sbjct: 107 THDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSP 166
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELARLTGGIVL+IHEENTIIMYRGKNY+QPPTEIMSPRITLSRKKALDKSKY
Sbjct: 167 EEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKY 226
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMM---- 177
RDGLRAV+KYIP+LE +LELL+AQA+ ++EN+++A ED QN +D + I ++
Sbjct: 227 RDGLRAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQNANIDSINSQGISNLQPENS 286
Query: 178 -----------ECSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKF 226
E SE + T+S S SE LSDIFE+DS+T+T+EKAE + LYL++F+KF
Sbjct: 287 DKLRELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKEKAE-QLLYLNEFEKF 345
Query: 227 PVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
PV++D E EDFEEHLRQIS DSR AKSL KD D DEVD+MFLRAASLLKK++R
Sbjct: 346 PVESDGEPEDFEEHLRQISADSRKAKSLEKDADLPQLDEVDQMFLRAASLLKKKRR 401
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/296 (70%), Positives = 242/296 (81%), Gaps = 17/296 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQT++V+VKTFS
Sbjct: 165 THDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSP 224
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIAAELARLTGGIVL+IHEENTIIMYRGKNY+QPPTEIMSPRITLSRKKALDKSKY
Sbjct: 225 EEVKEIAAELARLTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKY 284
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMM---- 177
RDGLRAV+ YIP+LEQ+LELL+ Q+ ++E S +AE+ T+ D + G +PS
Sbjct: 285 RDGLRAVRNYIPRLEQDLELLKVQSMGKAECGSASAEETLYTD-DGAESGGVPSTPLENS 343
Query: 178 -----------ECSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKF 226
ECSE + + M SDSEDLSDIFETDS+TETE+K + RPLYL++F KF
Sbjct: 344 EKLKKITDGQEECSEEESPMDLGMLSDSEDLSDIFETDSDTETEDKVK-RPLYLEEFKKF 402
Query: 227 PVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
P+Q +EE EDFEEHLRQ+S+DSR +S KD D FDEVD++FLRAASLLKK+KR
Sbjct: 403 PIQGNEEPEDFEEHLRQLSVDSRKVESSEKDSDIPSFDEVDRLFLRAASLLKKKKR 458
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 243/299 (81%), Gaps = 27/299 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKV+VKTF+
Sbjct: 124 THDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFTP 183
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIAAELAR TGGIVL+IHEENTIIMYRGKNY+QPPTEIMSPR+TLSRKKALDKSK
Sbjct: 184 EEVKEIAAELARFTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRVTLSRKKALDKSKC 243
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRS-----ENRSDAAEDVQNTE-----LDKPDFG 171
RDGLRA+++YIP+L+Q+LELL A+A ++ E+RS +++ ++N+E +D+ D
Sbjct: 244 RDGLRALRRYIPRLQQDLELLHARAGGKTDIDGAESRSISSKQLENSEKLKEIIDRQD-- 301
Query: 172 SIPSMMECSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQND 231
E SE+ P T+ +ASDSEDLSDIFETDS+ +TEE ++ RPLYL++F+KF V+ D
Sbjct: 302 ------EGSEDGPDTDLGIASDSEDLSDIFETDSDADTEETSK-RPLYLEEFEKFSVEAD 354
Query: 232 EEHEDFEEHLRQISIDSRNAKSLGK--------DEDSSHFDEVDKMFLRAASLLKKQKR 282
E EDFEEHLRQIS+ S+ + GK D DS FDEVD+MFLRAASLLK++KR
Sbjct: 355 GEPEDFEEHLRQISLGSKKGVTSGKDVDIPTGVDVDSPSFDEVDRMFLRAASLLKRKKR 413
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/294 (66%), Positives = 236/294 (80%), Gaps = 19/294 (6%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG K KNYVPVGRRGIYQGVILNMHLHWKKHQTLKV+VKTFSA
Sbjct: 92 THDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSA 151
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIAAELARL+GGIVL+IHE+NTIIMYRGKNY+QPPTEIMSPR++LSRKKALDKSKY
Sbjct: 152 EEVKEIAAELARLSGGIVLDIHEDNTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKY 211
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPS------ 175
RD LRAV++YIP+LEQELE+LRAQ ++ +E+ +DAAE +QN+ + + GSI +
Sbjct: 212 RDALRAVRRYIPRLEQELEILRAQFKSSAESNTDAAEAIQNSGRESIESGSISNFQLQNS 271
Query: 176 -----MMEC----SENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKF 226
MM +E++ S + SDS+ LSDIFETDS+TE K E +PLYLD+FD F
Sbjct: 272 YKDREMMNVNIGSTEDETDMNSELDSDSDKLSDIFETDSDTENFVKEE-KPLYLDEFDNF 330
Query: 227 PVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQ 280
P Q+D E DFEEH+RQ+S+ S+N + KD++ DEVDK+FL+A S LKK+
Sbjct: 331 PEQSDGEMNDFEEHMRQMSLKSKN---MEKDDNLPKLDEVDKIFLQATSFLKKK 381
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/297 (65%), Positives = 237/297 (79%), Gaps = 23/297 (7%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPEILTPEEHF+FLKMG K KNYVPVGRRGIYQGVILNMHLHWKKHQTL+V+VKTFSAE
Sbjct: 153 HDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAE 212
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
EVKEIA ELARLTGGIVL IHEE+TIIMYRGKNY+QPPTEIMSPR+TL RKKALDKSKYR
Sbjct: 213 EVKEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQPPTEIMSPRVTLPRKKALDKSKYR 272
Query: 123 DGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQ-------------NTELDKPD 169
DGLRAV++YIPKLEQELE+LRAQ ++ +E+ ++AAE +Q N +L+K D
Sbjct: 273 DGLRAVRRYIPKLEQELEILRAQFQSTAESNTEAAEGIQISDKVSVEPSSVSNLQLEKLD 332
Query: 170 FGSIPSMME----CSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDK 225
+ +M CSE++ +S + S S+ LSDIFETDS+TE K E +PLYLD+F+
Sbjct: 333 --KVGAMFNDNNSCSEDEAHMDSDLDSYSDKLSDIFETDSDTEDLVKEE-KPLYLDEFNN 389
Query: 226 FPVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
FP Q+D + +DFEEHL+QIS +S+N + KD D FDEVD++FLRAAS LKK+++
Sbjct: 390 FPEQSDGDTDDFEEHLQQISYNSKN---MEKDADLPKFDEVDQIFLRAASFLKKKRK 443
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/279 (68%), Positives = 229/279 (82%), Gaps = 10/279 (3%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHF+FLKMG K KNYVPVGRRGIYQGVILNMHLHWKKHQTLKV+VKTFSA
Sbjct: 112 THDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSA 171
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELARL+GGIVL+IHE+NTIIMYRGKNY+QPPTEIMSPR++LSRKKALDKSKY
Sbjct: 172 EEVKEIATELARLSGGIVLDIHEDNTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKY 231
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECSE 181
RD LRAV+++IP+LEQELE+LRAQ ++ +E+ +DAAE +QN D + C+E
Sbjct: 232 RDALRAVRRHIPRLEQELEILRAQFKSSAESNTDAAEAIQNNRERMND------NIGCTE 285
Query: 182 NDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHL 241
++ S + SDS+ LSDIFETDS+TE K E +PLYLD+FD FP Q+D E DFEEHL
Sbjct: 286 DETDMNSELDSDSDKLSDIFETDSDTENFIKEE-KPLYLDEFDNFPEQSDGEMNDFEEHL 344
Query: 242 RQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQ 280
RQ+S+ S+N + K+++ DEVDK+FL+A S LKK+
Sbjct: 345 RQMSLKSKN---MEKEDNLPKLDEVDKIFLQATSFLKKK 380
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/297 (62%), Positives = 233/297 (78%), Gaps = 17/297 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFYFLKMG K KNYVPVGRRGIYQGVILNMHLHWKKHQT+KV+VKTFS
Sbjct: 205 THDPEILTPEEHFYFLKMGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSP 264
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIAAELARLTGG+VL+IHEE+TIIMYRGKNY+QPPTEIMSPR++LSRKKALDKSKY
Sbjct: 265 EEVKEIAAELARLTGGLVLDIHEEDTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKY 324
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSM----- 176
RDGLRAV+K+IPKLEQEL L++QA+ ++ ++ E +Q T D +I S+
Sbjct: 325 RDGLRAVRKHIPKLEQELRFLQSQAKLNCKSNGESVEHMQETVDDTNKSKAISSLNLENL 384
Query: 177 -----------MECSENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDK 225
+ S++ ++ M+SDSEDLSD+FETD ++E +EK E +PL+L +F+
Sbjct: 385 DDSSNAMRSVSKDWSDDSSPIDTGMSSDSEDLSDMFETDIDSEADEKME-KPLFLKEFEN 443
Query: 226 FPVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQKR 282
F + ++E ED + LRQIS+DS+ AK L D +S FDEVD++FLR+ASLLKK++R
Sbjct: 444 FAAETEDEIEDLSDQLRQISMDSKQAKILENDVNSPEFDEVDRLFLRSASLLKKKRR 500
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 237/326 (72%), Gaps = 52/326 (15%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPEILTPEEHF+FLKMG K KNYVPVGRRGIYQGVILNMHLHWKKHQTL+V+VKTFSAE
Sbjct: 153 HDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAE 212
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKK-------- 114
EVKEIA ELARLTGGIVL IHEE+TIIMYRGKNY+QPPTEIMSPR+TL RKK
Sbjct: 213 EVKEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQPPTEIMSPRVTLPRKKVLHVPKDC 272
Query: 115 ---------------------ALDKSKYRDGLRAVKKYIPKLEQELELLRAQAETRSENR 153
ALDKSKYRDGLRAV++YIPKLEQELE+LRAQ ++ +E+
Sbjct: 273 LHHTIKDCFTFLFAYFPSLISALDKSKYRDGLRAVRRYIPKLEQELEILRAQFQSTAESN 332
Query: 154 SDAAEDVQ-------------NTELDKPDFGSIPSMME----CSENDPTTESLMASDSED 196
++AAE +Q N +L+K D + +M CSE++ +S + S S+
Sbjct: 333 TEAAEGIQISDKVSVEPSSVSNLQLEKLD--KVGAMFNDNNSCSEDEAHMDSDLDSYSDK 390
Query: 197 LSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHLRQISIDSRNAKSLGK 256
LSDIFETDS+TE K E +PLYLD+F+ FP Q+D + +DFEEHL+QIS +S+N + K
Sbjct: 391 LSDIFETDSDTEDLVKEE-KPLYLDEFNNFPEQSDGDTDDFEEHLQQISYNSKN---MEK 446
Query: 257 DEDSSHFDEVDKMFLRAASLLKKQKR 282
D D FDEVD++FLRAAS LKK+++
Sbjct: 447 DADLPKFDEVDQIFLRAASFLKKKRK 472
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/286 (65%), Positives = 224/286 (78%), Gaps = 20/286 (6%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFY+LKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+V++KTF+
Sbjct: 785 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 844
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EV EIA ELARLTGGIVL++HE NTIIMYRGKNY QPPTEIMSPRITL RKKALDKSK
Sbjct: 845 DEVNEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKC 904
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQ--NTELDKPDFGSIPSMMEC 179
RD LRAV+KYIP+LEQEL+LL+AQAET+ E + +D+Q + EL K S + +
Sbjct: 905 RDALRAVRKYIPRLEQELQLLQAQAETKREYLNVKVDDIQERSDELKKIIERSEECLED- 963
Query: 180 SENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFP-VQNDEEHEDFE 238
E + S +A+DS DLSDIFETDSE E E+ +RPL+L++F+KFP + N+ E EDF
Sbjct: 964 EEEEEDAGSELATDS-DLSDIFETDSELEDEKT--VRPLFLEEFEKFPAINNNREDEDFG 1020
Query: 239 EHLRQISIDSRNAKSLGKDED--SSHFDEVDKMFLRAASLLKKQKR 282
+ AKS G++ D S +FDEVDKMFLRAASLLKK++R
Sbjct: 1021 K-----------AKSEGEENDDKSPNFDEVDKMFLRAASLLKKKRR 1055
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/293 (64%), Positives = 222/293 (75%), Gaps = 31/293 (10%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFY+LKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+V++KTF+
Sbjct: 842 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 901
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EVKEIA ELARLTGGIVL++HE NTIIMYRGKNY QPPTEIMSPRITL RKKALDKSK
Sbjct: 902 DEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKC 961
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQ--NTELDKPDFGSIPSMMEC 179
RD LRAV+KYIP+LEQEL+LL+AQAET+ + + +D Q + EL K ++E
Sbjct: 962 RDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKK--------IIER 1013
Query: 180 SENDPTTESL-------MASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDE 232
SE E +A+DS DLSDIFETDSE E + K E RPL+L++F+KFP N+
Sbjct: 1014 SEECLEDEQEEDEAGLELATDS-DLSDIFETDSELE-DAKTE-RPLFLEEFEKFPAINNR 1070
Query: 233 EHEDFEEHLRQISIDSRNAKSLGKDED---SSHFDEVDKMFLRAASLLKKQKR 282
E EDF D AKS G++ D S +FDEVDKMFLRAA LLKK++R
Sbjct: 1071 EDEDFG--------DLGKAKSEGEENDDDKSPNFDEVDKMFLRAAFLLKKKRR 1115
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 219/307 (71%), Gaps = 29/307 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+K KNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 180 THDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 239
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA+ELA L+GGIVL I E NTIIMYRGKNYAQPP EIMSP+I L RKKALDKSKY
Sbjct: 240 EEVKEIASELAILSGGIVLSIQEGNTIIMYRGKNYAQPPPEIMSPKIALPRKKALDKSKY 299
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAA-------EDVQNTELDKPDFGS-- 172
RD LRA+++YIP+LEQELE L AQ + +R +A D N+ K D S
Sbjct: 300 RDRLRALRRYIPRLEQELEDLHAQMKLSGGHRGQSAVKDVTFVSDCTNSMSAKNDSSSSI 359
Query: 173 --------IPSMMECSE----------NDPTTESLMASDSEDLSDIFETDSETETEEKAE 214
+ +E SE +D +ES+ S+SEDLSDIFETDSE + E+ E
Sbjct: 360 HKRSVSDLLSENIERSEMLEDGNTEDDDDSASESITCSESEDLSDIFETDSEEQVEDTKE 419
Query: 215 LRPLYLDQFDKF-PVQNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRA 273
RPLYLD DKF P ND E +DFEEHLR+I+ S S K+ S DE+DK+FLRA
Sbjct: 420 -RPLYLDSLDKFLPESNDNEPDDFEEHLRKIASLSDKTDSPAKELKISELDEIDKIFLRA 478
Query: 274 ASLLKKQ 280
+SLLKK+
Sbjct: 479 SSLLKKR 485
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/286 (66%), Positives = 221/286 (77%), Gaps = 17/286 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFY+LKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+V++KTF+
Sbjct: 171 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 230
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EVKEIA ELARLTGGIVL++HE NTIIMYRGKNY QPPTEIMSPRITL RKKALDKSK
Sbjct: 231 DEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKC 290
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQ--NTELDKPDFGSIPSMMEC 179
RD LRAV+KYIP+LEQEL+LL+AQAET+ + + +D Q + EL K S + +
Sbjct: 291 RDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLEDE 350
Query: 180 SENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEE 239
E D L A+DS DLSDIFETDSE E + K E RPL+L++F+KFP N+ E EDF
Sbjct: 351 QEEDEAGLEL-ATDS-DLSDIFETDSELE-DAKTE-RPLFLEEFEKFPAINNREDEDFG- 405
Query: 240 HLRQISIDSRNAKSLGKDED---SSHFDEVDKMFLRAASLLKKQKR 282
D AKS G++ D S +FDEVDKMFLRAA LLKK++R
Sbjct: 406 -------DLGKAKSEGEENDDDKSPNFDEVDKMFLRAAFLLKKKRR 444
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/308 (60%), Positives = 222/308 (72%), Gaps = 30/308 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+K KNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 173 THDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 232
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EVKEIA+ELARL+GGIVL+I E NTIIMYRGKNYAQPP EIMSP++TL RKKALDKSKY
Sbjct: 233 DEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYAQPPPEIMSPKVTLPRKKALDKSKY 292
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAE-TRSENRSDAAEDVQNTELDKPDFGSIPSMMECS 180
R+ LRA+++YIP+LEQEL L AQ + R +AAED+ D + S CS
Sbjct: 293 RERLRALRRYIPRLEQELVDLHAQMKLARDYKGQNAAEDITCIS-DSVNSTSAKEYSSCS 351
Query: 181 ----------------------EN-----DPTTESLMASDSEDLSDIFETDSETETEEKA 213
EN D +ES+ S+SEDLSDIFETDSE E +++
Sbjct: 352 VRKRSVSDLLSESIEGSGRLEDENYEVSADSASESITYSESEDLSDIFETDSEEEQVQES 411
Query: 214 ELRPLYLDQFDKFPVQ-NDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLR 272
+ +PLYLD+ DKFP + ND E +DFEEHLR+I+ S S K+ S DE+DK+FLR
Sbjct: 412 KEQPLYLDKLDKFPSENNDNEPDDFEEHLRKIASLSDRTDSSAKELKVSELDEIDKIFLR 471
Query: 273 AASLLKKQ 280
A+SLLKK+
Sbjct: 472 ASSLLKKR 479
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/286 (66%), Positives = 221/286 (77%), Gaps = 17/286 (5%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEILTPEEHFY+LKMG KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+V++KTF+
Sbjct: 107 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 166
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+EVKEIA ELARLTGGIVL++HE NTIIMYRGKNY QPPTEIMSPRITL RKKALDKSK
Sbjct: 167 DEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKC 226
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQ--NTELDKPDFGSIPSMMEC 179
RD LRAV+KYIP+LEQEL+LL+AQAET+ + + +D Q + EL K S + +
Sbjct: 227 RDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLEDE 286
Query: 180 SENDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEE 239
E D L A+DS DLSDIFETDSE E + K E RPL+L++F+KFP N+ E EDF
Sbjct: 287 QEEDEAGLEL-ATDS-DLSDIFETDSELE-DAKTE-RPLFLEEFEKFPAINNREDEDFG- 341
Query: 240 HLRQISIDSRNAKSLGKDED---SSHFDEVDKMFLRAASLLKKQKR 282
D AKS G++ D S +FDEVDKMFLRAA LLKK++R
Sbjct: 342 -------DLGKAKSEGEENDDDKSPNFDEVDKMFLRAAFLLKKKRR 380
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 29/307 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 37 THDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 96
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELA L+GGIVL+I + NTIIMYRGKNYAQPP EIMSP+++LSRKKALDKSKY
Sbjct: 97 EEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKY 156
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAA--------EDVQNTELDKPDFGSI 173
+ LRA+++YIP+LEQELE L AQ + E++ A + + + K GSI
Sbjct: 157 MEKLRALRRYIPRLEQELEDLHAQMKLAGEHQGQNAGKHVASISHNTNSMPVRKEPCGSI 216
Query: 174 PS---------MMECS----------ENDPTTESLMASDSEDLSDIFETDSETETEEKAE 214
+ +E S E+D +ESL ++SEDLSDIFET+SE + E+ +
Sbjct: 217 RNKTVSDLLSETVEGSKRLEDESSAIEDDSASESLSFTESEDLSDIFETESEEQEEDNKD 276
Query: 215 LRPLYLDQFDKFPV-QNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRA 273
RPLYLD+ DKFP +ND E +DFEEHLR+I+ S S K+ S DE+DK+FLRA
Sbjct: 277 -RPLYLDRLDKFPSGKNDNEPDDFEEHLRRIASLSDKTDSPSKELKVSELDEIDKIFLRA 335
Query: 274 ASLLKKQ 280
+SLLKK+
Sbjct: 336 SSLLKKR 342
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/307 (59%), Positives = 224/307 (72%), Gaps = 29/307 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 180 THDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 239
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELA L+GGIVL+I + NTIIMYRGKNYAQPP EIMSP+++LSRKKALDKSKY
Sbjct: 240 EEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKY 299
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAA--------EDVQNTELDKPDFGSI 173
+ LRA+++YIP+LEQELE L AQ + E++ A + + + K GSI
Sbjct: 300 MEKLRALRRYIPRLEQELEDLHAQMKLAGEHQGQNAGKHVASISHNTNSMPVRKEPCGSI 359
Query: 174 PS---------MMECS----------ENDPTTESLMASDSEDLSDIFETDSETETEEKAE 214
+ +E S E+D +ESL ++SEDLSDIFET+SE + E+ +
Sbjct: 360 RNKTVSDLLSETVEGSKRLEDESSAIEDDSASESLSFTESEDLSDIFETESEEQEEDNKD 419
Query: 215 LRPLYLDQFDKFPV-QNDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFLRA 273
RPLYLD+ DKFP +ND E +DFEEHLR+I+ S S K+ S DE+DK+FLRA
Sbjct: 420 -RPLYLDRLDKFPSGKNDNEPDDFEEHLRRIASLSDKTDSPSKELKVSELDEIDKIFLRA 478
Query: 274 ASLLKKQ 280
+SLLKK+
Sbjct: 479 SSLLKKR 485
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/309 (58%), Positives = 219/309 (70%), Gaps = 33/309 (10%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+KCKNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 179 THDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 238
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EEVKEIA ELARL+GGIVL+I + NTIIMYRGKNYAQPP EIMSP+++LSRKKALDKSKY
Sbjct: 239 EEVKEIATELARLSGGIVLDIQDGNTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKY 298
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMME-CS 180
+ LRA+++YIP+LEQELE L AQ + E++ + ++ D S+P+ E CS
Sbjct: 299 MEKLRALRRYIPRLEQELEDLHAQMKLAGEHKGQSVG--KHIASISHDTNSVPARKEPCS 356
Query: 181 ENDPTTESLMASDS----------------------------EDLSDIFETDSETETEEK 212
T S + S S EDLSDIFET+SE + E+K
Sbjct: 357 SVHSKTVSDLLSGSVEGSKRLEDESSEVEDDSASESLSFSESEDLSDIFETESEEQEEDK 416
Query: 213 AELRPLYLDQFDKFPVQ-NDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVDKMFL 271
+ PLYLD+ DKFP + ND E +DFEEHLR+I+ S S K+ S DE+DK+FL
Sbjct: 417 KD-HPLYLDRLDKFPSEKNDNEPDDFEEHLRKIASLSDKTDSPSKELKVSELDEIDKIFL 475
Query: 272 RAASLLKKQ 280
RA+SLLKK+
Sbjct: 476 RASSLLKKR 484
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 213/313 (68%), Gaps = 35/313 (11%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPE+LTPEEHFYFLKMG+K KNYVPVGRRGIYQGVILNMHLHWKKHQTL+VIVKTF+
Sbjct: 173 THDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTP 232
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKA-----L 116
+EVKEIA+ELARL+GGIVL+I E NTIIMYRGKNYAQPP EIMSP++TL RKK
Sbjct: 233 DEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYAQPPPEIMSPKVTLPRKKWKVLQHW 292
Query: 117 DKSKYRDGLRAVKKYIPKLEQELELLRAQAE-TRSENRSDAAEDVQNTELDKPDFGSIPS 175
+ RA+++YIP+LEQEL L AQ + R +AAED+ D + S
Sbjct: 293 INQNTENASRALRRYIPRLEQELVDLHAQMKLARDYKGQNAAEDITCIS-DSVNSTSAKE 351
Query: 176 MMECS----------------------EN-----DPTTESLMASDSEDLSDIFETDSETE 208
CS EN D +ES+ S+SEDLSDIFETDSE E
Sbjct: 352 YSSCSVRKRSVSDLLSESIEGSGRLEDENYEVSADSASESITYSESEDLSDIFETDSEEE 411
Query: 209 TEEKAELRPLYLDQFDKFPVQ-NDEEHEDFEEHLRQISIDSRNAKSLGKDEDSSHFDEVD 267
++++ +PLYLD+ DKFP + ND E +DFEEHLR+I+ S S K+ S DE+D
Sbjct: 412 QVQESKEQPLYLDKLDKFPSENNDNEPDDFEEHLRKIASLSDRTDSSAKELKVSELDEID 471
Query: 268 KMFLRAASLLKKQ 280
K+FLRA+SLLKK+
Sbjct: 472 KIFLRASSLLKKR 484
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/245 (63%), Positives = 188/245 (76%), Gaps = 23/245 (9%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
THDPEIL PEEHF+FLKMG K KN VPVGRRGIYQGVIL+MHLH KKHQTLKV VKTFSA
Sbjct: 51 THDPEILXPEEHFFFLKMGLKRKNNVPVGRRGIYQGVILSMHLHXKKHQTLKV-VKTFSA 109
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
EVKEIAAELARL+GGIVL+IHE+NTIIMYRGKNY+QPPT+IMSPR++LSRKKALDKSKY
Sbjct: 110 AEVKEIAAELARLSGGIVLDIHEDNTIIMYRGKNYSQPPTQIMSPRVSLSRKKALDKSKY 169
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECSE 181
R LEQEL +LRAQ ++ +E++++AAE +QN+ + +E +
Sbjct: 170 R------------LEQELAILRAQFKSSAESKTEAAEAIQNSGRES---------IESGK 208
Query: 182 NDPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHL 241
++ S + SDS+ LSDIFETDS+TE E +PL LD FD FP Q++ E DFEEHL
Sbjct: 209 DETDMNSELDSDSDKLSDIFETDSDTENFVNEE-KPLNLDDFDNFPEQSNGEMNDFEEHL 267
Query: 242 RQISI 246
+Q+S+
Sbjct: 268 QQMSL 272
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KV+ K
Sbjct: 167 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRP 226
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ G V++I NTII YRGKNY QP ++MSP TLS++KAL+K +Y
Sbjct: 227 GQVYEYAEELARLSKGTVIDIKPNNTIIFYRGKNYVQP--KVMSPPDTLSKQKALEKYRY 284
Query: 122 RDGLRAVKKYIPKLEQELE 140
L K+I +LEQELE
Sbjct: 285 EQSLEHTSKFIEQLEQELE 303
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 112/171 (65%), Gaps = 3/171 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KVI K
Sbjct: 176 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRP 235
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A EL RL+ G V++I NTII YRGKNY QP ++MSP TLS++KAL+K +Y
Sbjct: 236 GQVYEYAEELTRLSKGTVIDIKPNNTIIFYRGKNYVQP--KVMSPPDTLSKQKALEKYRY 293
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGS 172
L ++I KLE+ELE + +NR + E + + E + D S
Sbjct: 294 EQSLEHTSQFIEKLEKELEDYQKHVAL-FKNRGETLETISSEETNVDDLTS 343
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KV+ K
Sbjct: 164 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVVCKPCRP 223
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A EL RL+ G V++I NTI+ YRGKNY QP ++MSP TLS++KAL+K +Y
Sbjct: 224 GQVYEYAEELTRLSKGTVIDIKPNNTIMFYRGKNYVQP--KVMSPPETLSKQKALEKYRY 281
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ-AETRSENRSDAAEDVQN--TELDKP 168
L ++I KLE+ELE + A ++ N+ A E + N T +D P
Sbjct: 282 LQSLEHTSQFIEKLEKELEDYKKHVALFKNHNKGVAIEKISNEDTTVDDP 331
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KV+ K
Sbjct: 164 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRP 223
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ G V++I NTII YRGKNY QP ++MSP TLS++KAL+K +Y
Sbjct: 224 GQVYEYAEELARLSKGTVIDIKPNNTIIFYRGKNYVQP--KVMSPPDTLSKQKALEKYRY 281
Query: 122 RDGLRAVKKYIPKLEQELE 140
L ++I +LE+ELE
Sbjct: 282 EQSLEHTSQFIEQLEKELE 300
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 100/139 (71%), Gaps = 2/139 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
+DPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KVI K
Sbjct: 116 AYDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCKV 175
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GI+++I NTII YRGKNY QP ++MSP TLS+ KAL+K +Y
Sbjct: 176 GQVYEYAEELARLSKGIMIDIKPNNTIIFYRGKNYVQP--QVMSPPDTLSKSKALEKYRY 233
Query: 122 RDGLRAVKKYIPKLEQELE 140
L ++I KLE ELE
Sbjct: 234 EQSLEHTSQFIEKLENELE 252
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
+DPEILT EE Y + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KV K
Sbjct: 173 AYDPEILTEEEKHYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVTCKPCKP 232
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
++ E A ELARL+ GI ++I +NTII YRGKNY QP +IMSP TLS+ KAL+K +Y
Sbjct: 233 GQIDEYAEELARLSKGIAIDIRPDNTIIFYRGKNYVQP--KIMSPPDTLSKDKALEKYRY 290
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAED 159
L ++I KLE+ELE + R +NR +AA D
Sbjct: 291 EQSLEHTSQFIEKLEKELENYQEHV-VRYKNRKEAAVD 327
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE FY KM +K NYVPVGRRG++ GVILNMH+HWKKH+T+KVI K +V
Sbjct: 451 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 510
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A E+ARL+GG ++I ++TII YRGKNY QP E+MSP TLS+K+AL+KSKY
Sbjct: 511 HEYANEIARLSGGTPIQIIGDDTIIFYRGKNYVQP--EVMSPIDTLSKKRALEKSKYEQS 568
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 569 LESVRRFIAIAEKELEL 585
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T DPEILT EE Y + G K K+YVPVGRRG++ GV+LNMHLHWK H+T+KVI K
Sbjct: 119 TFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 178
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV++I NTII YRGKNY QP E+MSP TLS+ KAL+K +Y
Sbjct: 179 GQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQP--EVMSPPNTLSKVKALEKYRY 236
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDV 160
L ++I +LE+ELE + + D A+DV
Sbjct: 237 EQSLEHTSQFIERLEKELEEYHQHLAKFKKGKEDNAKDV 275
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 102/137 (74%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE FY KMG+K NYVP+GRRG++ GVILNMH+HWKKH+T+KV K +V
Sbjct: 165 PHDLTGEERFYIKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQV 224
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A E+ARL+GGI ++I ++TII YRGK+Y QP E+MSP TLS+K+AL+KSKY
Sbjct: 225 HEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQS 282
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 283 LESVRRFIAIAEKELEL 299
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 131/208 (62%), Gaps = 10/208 (4%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ L EE FY K+ +K NYVP+GRRG++ GVILNMHLHWKKH+T+KVI K ++
Sbjct: 172 PDDLNGEERFYLKKVSQKKSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQI 231
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
+E A+E+ARL+GG+ + I +T++ YRGK+Y QP ++MSP TLS+KKAL+KSKY
Sbjct: 232 QEYASEIARLSGGVPINIVGNDTVVFYRGKDYVQP--DVMSPIDTLSKKKALEKSKYEQS 289
Query: 125 LRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSM-MECSEND 183
L V+++I E+ELEL + +S QN +L D S ME +
Sbjct: 290 LETVRRFIAVSEKELELYYQHVALYGKPQS------QNADLIYGDDRKASSREMEELNHG 343
Query: 184 PTTESLMASDSEDLSDIFETDSETETEE 211
S++AS++ SDI TD+ +E+EE
Sbjct: 344 KDQGSILASNTNGFSDIDITDT-SESEE 370
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE FY KM +K NYVPVGRRG++ GVILNMH+HWKKH+T+KVI K +V
Sbjct: 72 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 131
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A E+ARL+GG ++I ++TII YRGKNY QP E+MSP TLS+K+AL+KSKY
Sbjct: 132 HEYANEIARLSGGTPIQIIGDDTIIFYRGKNYVQP--EVMSPIDTLSKKRALEKSKYEQS 189
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 190 LESVRRFIAIAEKELEL 206
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWK H+T+KV+ K
Sbjct: 165 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKNHETVKVVCKPCRP 224
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A EL RL+ G +++I NTI+ YRGKNY QP ++MSP TLS++KAL+K +Y
Sbjct: 225 GQVYEYAEELTRLSKGTIIDIKPNNTIMFYRGKNYVQP--QVMSPPDTLSKQKALEKYRY 282
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQN 162
L ++I KLE+ELE + A+E + N
Sbjct: 283 LQSLEHTSQFIEKLEKELEDYKKHVALFKNREGVASEKISN 323
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 102/137 (74%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ L+ EE FY K+ +K NYVPVGRRG++ GVILNMHLHWKKH+T+KVI K ++
Sbjct: 170 PDDLSGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQI 229
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
+E A E+ARL+GGI + I ++TI+ YRGKNY QP E+MSP TLS+KKAL+KSKY
Sbjct: 230 QEYANEIARLSGGIPVNIIGDDTIVFYRGKNYVQP--EVMSPIDTLSKKKALEKSKYEQS 287
Query: 125 LRAVKKYIPKLEQELEL 141
L V+++I E+ELEL
Sbjct: 288 LETVRRFIAISEKELEL 304
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE FY KM +K NYVPVGRRG++ GVILNMH+HWKKH+T+KVI K +V
Sbjct: 115 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 174
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A E+ARL+GG ++I ++TII YRGKNY QP E MSP TLS+K+AL+KSKY
Sbjct: 175 HEYANEIARLSGGTPIQIIGDDTIIFYRGKNYVQP--EXMSPIDTLSKKRALEKSKYEQS 232
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 233 LESVRRFIAIAEKELEL 249
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE F+ KM +K NYVP+GRRG++ GVILNMH+HWKKH+T+KVI +V
Sbjct: 141 PHDLTGEERFFMKKMAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICNFCKPGQV 200
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A E+ARL+GGI +++ ++TII YRGKNY QP E+MSP TLS+K+AL+KSKY
Sbjct: 201 HEYAQEIARLSGGIPIQVIGDDTIIFYRGKNYVQP--EVMSPIDTLSKKRALEKSKYEQS 258
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 259 LESVRRFIAIAEKELEL 275
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ LT EE FY KM +K NY+ +GRRG++ GV+LNMH+HWKKH+T+KV K +V
Sbjct: 169 PDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQV 228
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
E A ELARL+GGI L+I ++TII YRGKNY QP E+MSP TLS+KKAL+KSKY
Sbjct: 229 HEYAQELARLSGGIPLQIIGDDTIIFYRGKNYEQP--EVMSPIDTLSKKKALEKSKYEQS 286
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+++I E+ELEL
Sbjct: 287 LESVRRFIAIAEKELEL 303
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L+ EE FY K+ +K NYVPVGRRG++ GVILNMHLHWKKH+T+KVI K +++E
Sbjct: 173 LSGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 232
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLRA 127
A E+ARL+GGI + + ++TI+ YRGK+Y QP E+MSP TLS+KKAL+KSKY L
Sbjct: 233 ANEIARLSGGIPVNVIGDDTIVFYRGKSYVQP--EVMSPVDTLSKKKALEKSKYEQSLET 290
Query: 128 VKKYIPKLEQELEL 141
V+++I E+ELEL
Sbjct: 291 VRRFIAISEKELEL 304
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPEILT EE Y + G K KN+V +GRRG++ GV+LNMH+HWKKH+T+KVI K
Sbjct: 131 YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPG 190
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
+V E A EL RL+ GIV++I N+II YRGKNY QP E+MSP TLS+ KAL+K KY
Sbjct: 191 QVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPNTLSKDKALEKYKYE 248
Query: 123 DGLRAVKKYIPKLEQELELLRAQAETRSENRSDAA 157
L ++I KLE+ELE + + DAA
Sbjct: 249 QSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAA 283
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPEILT EE Y + G K KN+V +GRRG++ GV+LNMH+HWKKH+T+KVI K
Sbjct: 193 YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPG 252
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
+V E A EL RL+ GIV++I N+II YRGKNY QP E+MSP TLS+ KAL+K KY
Sbjct: 253 QVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPNTLSKDKALEKYKYE 310
Query: 123 DGLRAVKKYIPKLEQELELLRAQAETRSENRSDAA 157
L ++I KLE+ELE + + DAA
Sbjct: 311 QSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAA 345
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L EE FY K+ +K NYVPVGRRG++ GVILNMHLHWKKH+T+KVI K +++E
Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLRA 127
A+E+ARL+GGI + +TI+ YRGKNY QP ++MSP TLS+KKAL+KSKY L
Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYRGKNYVQP--DVMSPVDTLSKKKALEKSKYEQSLET 289
Query: 128 VKKYIPKLEQELEL 141
V+++I E+ELEL
Sbjct: 290 VRRFIAVSEKELEL 303
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L EE FY K+ +K NYVPVGRRG++ GVILNMHLHWKKH+T+KVI K +++E
Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLRA 127
A+E+ARL+GGI + +TI+ YRGKNY QP ++MSP TLS+KKAL+KSKY L
Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYRGKNYVQP--DVMSPVDTLSKKKALEKSKYEQSLET 289
Query: 128 VKKYIPKLEQELEL 141
V+++I E+ELEL
Sbjct: 290 VRRFIAVSEKELEL 303
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L EE FY K+ +K NYVPVGRRG++ GVILNMHLHWKKH+T+KVI K +++E
Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLRA 127
A+E+ARL+GGI + +TI+ YRGKNY QP ++MSP TLS+KKAL+KSKY L
Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYRGKNYVQP--DVMSPVDTLSKKKALEKSKYEQSLET 289
Query: 128 VKKYIPKLEQELEL 141
V+++I E+ELEL
Sbjct: 290 VRRFIAVSEKELEL 303
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 101/138 (73%), Gaps = 3/138 (2%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEE 63
P LT EE F+ KM +K NYVP+GRRG++ GVILNMH+HWKKH+T+KVI + +
Sbjct: 110 PHELTGEERFFMKKMAQKKSNYVPIGRRGVFGGVILNMHMHWKKHETVKVICNSSCKPGQ 169
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
V+E A E+ARL+GGI ++I ++T+I YRGKNY QP ++MSP TLS+KKAL+KSKY
Sbjct: 170 VQEFAQEIARLSGGIPIQIIGDDTVIFYRGKNYVQP--KVMSPVDTLSKKKALEKSKYEQ 227
Query: 124 GLRAVKKYIPKLEQELEL 141
L V+ +I E+ELEL
Sbjct: 228 SLETVRHFIAIAEKELEL 245
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T DPEILT EE Y + G K K+YVPVGRRG++ GV+LNMHLHWK H+T+KVI K
Sbjct: 246 TFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 305
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+ E A ELARL+ GIV++I + II YRGKNY QP ++MSP TLS+ KAL+K +Y
Sbjct: 306 GQAHEYAEELARLSKGIVIDIKPNSIIIFYRGKNYVQP--KVMSPPDTLSKAKALEKYRY 363
Query: 122 RDGLRAVKKYIPKLEQELE 140
L ++I +LE+ELE
Sbjct: 364 EQSLEHTSQFIERLEKELE 382
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P +T EE FY KMG+K NYVP+GRRG++ GVILNMHLHWKKH+T+KVI +V
Sbjct: 161 PHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQV 220
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
++ A ELA+L+GG+ + I ++TII YRGK Y QP ++MSP TLS+K+A +KSKY
Sbjct: 221 QQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQP--QVMSPIDTLSKKRAYEKSKYEQS 278
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+ +I E+ELEL
Sbjct: 279 LESVRHFIAIAEKELEL 295
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T+DPEILT EE Y + G + K+YVPVGRRG++ GV+LNMHLHWK H+T+KVI K
Sbjct: 119 TYDPEILTEEERHYLKRTGERKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 178
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV++I NTII YRGKNY +P E+MSP TLS+ KAL+K +Y
Sbjct: 179 GQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVKP--EVMSPPNTLSKAKALEKYRY 236
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDV 160
L ++I KLE+ELE + + D A+DV
Sbjct: 237 EQSLEHTSQFIEKLEKELEEYHQHLAKFKKGKEDTAKDV 275
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 2/137 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P +T EE FY KMG+K NYVP+GRRG++ GVILNMHLHWKKH+T+KVI +V
Sbjct: 158 PHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQV 217
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDG 124
++ A ELA+L+GG+ + I ++TII YRGK Y QP ++MSP TLS+K+A +KSKY
Sbjct: 218 QQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQP--QVMSPIDTLSKKRAYEKSKYEQS 275
Query: 125 LRAVKKYIPKLEQELEL 141
L +V+ I E+ELEL
Sbjct: 276 LESVRHSIAIAEKELEL 292
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 24/255 (9%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
+LTPE+ + K+G K KNYVPVGRRGIY G I NMH+HWKKH+T+++ F E++KE
Sbjct: 224 VLTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKE 283
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLR 126
+ L RL+GGIV++IH+ TIIM+RG+NY +P +I +++KAL KSK+ +
Sbjct: 284 MGETLERLSGGIVIDIHQGTTIIMWRGRNYKRPKVDIPIIFKNFNKRKALIKSKHEQSIG 343
Query: 127 AVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECSENDPTT 186
++K I K E++L LRA R+ E +N + P+ P+ + ++D
Sbjct: 344 SLKDQIVKWEKDLRELRADMAREEAARARWLE--ENPGMAPPE---PPAPVSVEQSD--- 395
Query: 187 ESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHLRQISI 246
DS++++DI S+ + E +L P Y D +D E+ D + L S+
Sbjct: 396 -----DDSDEVTDI----SDDDITEVDDLGPEYDD-------DSDWEYPDSDVDLPDRSV 439
Query: 247 DSRNAKSLGKDEDSS 261
S + S DS+
Sbjct: 440 PSNDNASTSNVSDSN 454
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 2/113 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPEILT EE FY + G K KNYVPVGRRG++ GV+LNMHLHWKKH+T+KVI K
Sbjct: 152 VHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRP 211
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKK 114
+V E A EL RL+ G V++I NTII YRGKNY QP ++MSP TLS++K
Sbjct: 212 GQVYEYAEELTRLSKGTVIDIKPNNTIIFYRGKNYVQP--KVMSPPDTLSKQK 262
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T DPE+LT EE Y + G K KN++ VGRRG++ GV+LNMHLHWKKH+T+K+I K
Sbjct: 100 TCDPEMLTEEEKHYLKRTGEKKKNFILVGRRGVFGGVVLNMHLHWKKHETVKIICKPCKP 159
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
++ + A ELARL+ GIV++I N+II YRGKNY QP +MSP TLS+ KAL+K KY
Sbjct: 160 GQIHQYAEELARLSKGIVIDIRPNNSIIFYRGKNYVQP--TVMSPPDTLSKNKALEKYKY 217
Query: 122 RDGLRAVKKYI 132
L ++I
Sbjct: 218 EQSLEHTSQFI 228
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPE LT EE Y + G K KN+V VGRRG++ GV+LN+HLHWKKH+T+KVI K +
Sbjct: 166 YDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKP 225
Query: 63 -EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV+++ NTI++YRGKNY +P E+MSP TLS+ KAL+K +Y
Sbjct: 226 GQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRP--EVMSPVDTLSKDKALEKYRY 283
Query: 122 RDGLRAVKKYI 132
L ++I
Sbjct: 284 EQSLEHTSEFI 294
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPE LT EE Y + G K KN+V VGRRG++ GV+LN+HLHWKKH+T+KVI K +
Sbjct: 177 YDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKP 236
Query: 63 -EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV+++ NTI++YRGKNY +P E+MSP TLS+ KAL+K +Y
Sbjct: 237 GQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRP--EVMSPVDTLSKDKALEKYRY 294
Query: 122 RDGLRAVKKYI 132
L ++I
Sbjct: 295 EQSLEHTSEFI 305
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+DPE LT EE Y + G K KN+V VGRRG++ GV+LN+HLHWKKH+T+KVI K +
Sbjct: 177 YDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKP 236
Query: 63 -EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
+V E A ELARL+ GIV+++ NTI++YRGKNY +P E+MSP TLS+ KAL+K +Y
Sbjct: 237 GQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRP--EVMSPVDTLSKDKALEKYRY 294
Query: 122 RDGLRAVKKYI 132
L ++I
Sbjct: 295 EQSLEHTSEFI 305
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T DPEILT EE Y + G K K+YVPVGRRG++ V+LNMHLHWKKH+T+KVI K
Sbjct: 181 TFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGEVVLNMHLHWKKHETVKVICKPCKP 240
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKA 115
+ E EL R + GIV++I N II YRG+NY QP ++MSP TLS+ K
Sbjct: 241 GQAHEYTEELTRPSKGIVIDIKPNNIIIFYRGRNYVQP--KVMSPPDTLSKAKV 292
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LTPE+ + K+G + +NYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 144 HDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 203
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A LARL+GGIV+ IH+ TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 204 KIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 261
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+EQEL
Sbjct: 262 QALDSQKLNIKKIEQEL 278
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LTPE+ + K+G + +NYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 144 HDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 203
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A LARL+GGIV+ IH+ TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 204 KIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 261
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+EQEL
Sbjct: 262 QALDSQKLNIKKIEQEL 278
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LTPE+ + K+G + KNYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 146 HDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 205
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A+ LARL+GGIV+ +H TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 206 KIKEMASMLARLSGGIVINVHNVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 263
Query: 123 DGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K+EQ+L + E
Sbjct: 264 QALESQKLNIKKIEQQLRRMGVNPE 288
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LTPE+ + K+G + KNYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 146 HDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 205
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A+ LARL+GGIV+ +H TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 206 KIKEMASMLARLSGGIVINVHNVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 263
Query: 123 DGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K+EQ+L + E
Sbjct: 264 QALESQKLNIKKIEQQLRRMGVNPE 288
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + KNYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 129 HDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 188
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A LARL+GGIV+ +H+ TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 189 KIKEMATMLARLSGGIVINVHDVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 246
Query: 123 DGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K+EQ+L + E
Sbjct: 247 QALDSQKLNIKKIEQQLRRMGVNPE 271
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 98/146 (67%), Gaps = 2/146 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPE+ T E+ F K+G K KNYVPVG RG++ GV+ NMH+HWK H+T++V F
Sbjct: 86 VHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPK 145
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
E++KE+A+ +ARL+GG+V+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 146 EKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI--PVNTLTKRKALFKARF 203
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K EQ+L + E
Sbjct: 204 EQALESQKLNIKKTEQQLRRMGVNPE 229
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 98/146 (67%), Gaps = 2/146 (1%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPE+ T E+ F K+G K KNYVPVG RG++ GV+ NMH+HWK H+T++V F
Sbjct: 86 VHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPK 145
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
E++KE+A+ +ARL+GG+V+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 146 EKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI--PVNTLTKRKALFKARF 203
Query: 122 RDGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K EQ+L + E
Sbjct: 204 EQALESQKLNIKKTEQQLRRMGVNPE 229
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LTPE+ + K+G + KNYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 76 HDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVSCDNFPKE 135
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A +ARL+GGIV+ +H TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 136 KIKEMATMIARLSGGIVVNVHNVKTIIMFRGRNYRQPKDLI--PLNTLTKRKALFKARFE 193
Query: 123 DGLRAVKKYIPKLEQELELLRAQAE 147
L + K I ++EQ+L + E
Sbjct: 194 QALESQKLNIKQIEQQLRRMGVNPE 218
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+ T E+ + K+G + +NYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 147 HDPELFTSEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 206
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+A LARL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 207 KIKEMATMLARLSGGIVINIHNVKTIIMFRGRNYRQPKNLI--PINTLTKRKALFKARFE 264
Query: 123 DGLRAVKKYIPKLEQELELLRAQAE 147
L + K I K+EQ+L + E
Sbjct: 265 QALESQKLNIKKIEQQLRRMGVNPE 289
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 128 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 187
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 188 KIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLI--PFNTLTKRKALFKARFE 245
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 246 QALESQKLNIKKIETQL 262
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 143 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 202
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K++Y
Sbjct: 203 KIKEMAAMLTRLSGGIVVNIHNTKTIIMFRGRNYRQPKNLI--PFNTLTKRKALFKARYE 260
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 261 QALESQKLNIKKIETQL 277
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 129 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 188
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 189 KIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLI--PFNTLTKRKALFKARFE 246
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 247 QALESQKLNIKKIETQL 263
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 131 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 190
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 191 KIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLI--PFNTLTKRKALFKARFE 248
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 249 QALESQKLNIKKIETQL 265
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 139 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 198
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 199 KIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLI--PLNTLTKRKALFKARFE 256
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 257 QALESQKLNIKKIETQL 273
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F E
Sbjct: 139 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKE 198
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
++KE+AA L RL+GGIV+ IH TIIM+RG+NY QP I P TL+++KAL K+++
Sbjct: 199 KIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLI--PLNTLTKRKALFKARFE 256
Query: 123 DGLRAVKKYIPKLEQEL 139
L + K I K+E +L
Sbjct: 257 QALESQKLNIKKIETQL 273
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 99/153 (64%), Gaps = 8/153 (5%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
HDPE+LT E+ + K+G + KNYVPVG RG++ GV+ NMHLHWK H+T++V F E
Sbjct: 144 HDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE 203
Query: 63 EVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP----PTEIMSPRITLSRKK---- 114
++KE+A LARL+GGIV+ +H+ TIIM+RG+NY QP P ++ R + KK
Sbjct: 204 KIKEMATMLARLSGGIVINVHDVKTIIMFRGRNYRQPKNLIPINTLTKRKATATKKAKEA 263
Query: 115 ALDKSKYRDGLRAVKKYIPKLEQELELLRAQAE 147
AL K+++ L + K I K+EQ+L + E
Sbjct: 264 ALFKARFEQALDSQKLNIKKIEQQLRRMGVNPE 296
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F K+G K Y+ +GRRG+Y G + NMHLHWK + +K+IV+ + ++
Sbjct: 634 DLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQ 693
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK +A L + G+V+ + + +I+YRGKNY +P + M P+ L+R++AL +S
Sbjct: 694 VKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRP--DAMRPKNMLTRRQALARSI 751
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENR 153
A+K +I LE+++ELL+A+ E R +
Sbjct: 752 ELQRREALKHHILDLEEKIELLKAELEERKSGK 784
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 16 FLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARL 74
F ++ RK + +GR QG+ M W+K K+ +K E +A EL L
Sbjct: 433 FRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRIL 492
Query: 75 TGGIVLEIHEENTIIMYRGKNYAQPPT 101
TGG +L ++E I+ YRG +Y PPT
Sbjct: 493 TGGTLLSRNKE-YIVFYRGNDYL-PPT 517
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F K+G K Y+ +GRRG+Y G + NMHLHWK + +K+IV+ + ++
Sbjct: 691 DLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQ 750
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK +A L + G+V+ + + +I+YRGKNY +P + M P+ L+R++AL +S
Sbjct: 751 VKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRP--DAMRPKNMLTRRQALARSI 808
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENR 153
A+K +I LE+++ELL+A+ E R +
Sbjct: 809 ELQRREALKHHILDLEEKIELLKAELEERKSGK 841
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 16 FLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARL 74
F ++ RK + +GR QG+ M W+K K+ +K E +A EL L
Sbjct: 490 FRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRIL 549
Query: 75 TGGIVLEIHEENTIIMYRGKNYAQPPT 101
TGG +L ++E I+ YRG +Y PPT
Sbjct: 550 TGGTLLSRNKE-YIVFYRGNDYL-PPT 574
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 93/144 (64%), Gaps = 5/144 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S +V
Sbjct: 581 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADV 640
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
K IA L +GGI++ + + + I+++RGKNY +P + + PR LS++KAL +S
Sbjct: 641 KRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSS--LRPRNLLSKRKALARSIE 698
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ 145
+A+ ++ KL +++E L+A+
Sbjct: 699 LQRHQALSRHFAKLNRKVERLKAE 722
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E ++ EE F F K+G K Y+ +G+RG+Y G I NMHLHWK + +KVIV+ S +
Sbjct: 738 DLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQ 797
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ I II+YRGKNY P E+M P+ L++++AL +S
Sbjct: 798 VKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHP--EVMRPKNLLTKRQALVRSI 855
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+K +I L++ +ELL+ + E
Sbjct: 856 ELQRREALKHHISDLQERIELLKLELE 882
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
LT +E F ++ R + +GR QG+ + W++ +K+ +K E
Sbjct: 529 LTDKEMTIFRRLARTVPPHFALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRNER 588
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+A EL LTGGI+L ++E I+ YRG ++ P
Sbjct: 589 MAEELKVLTGGILLSRNKE-YIVFYRGNDFLPP 620
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 96/147 (65%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G + NMHLHWK + +K+I+K S E+
Sbjct: 630 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQ 689
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+IA L +GG+++ +I + II+YRGK+Y +P ++ P+ L+++KAL +S
Sbjct: 690 VKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRP--SMLRPKNLLTKRKALARSI 747
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A++ ++ LE ++E +R++ E
Sbjct: 748 EIQRSEALQNHVSALEIKVEKIRSEIE 774
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE L+ + K+ VG RG+ Q V+ +H WK + +V V+ A +
Sbjct: 209 ELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNM 268
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K + L TGG+V+ T+ +YRG +Y P
Sbjct: 269 KRMHEILENKTGGLVI-WRSGATVSLYRGVSYEDP 302
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + VGR QG+ + M W+K +KV +K E +A ++ +LTG
Sbjct: 431 RLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTG 490
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++ ++ YRGK++ P
Sbjct: 491 GLLLS-RNKDFLVFYRGKDFLSP 512
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K+IVK + E
Sbjct: 626 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEH 685
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+IA L +GG+++ + + + +I++YRGK+Y +P ++ P+ L+++KAL +S
Sbjct: 686 VKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQRP--SMLRPKNLLTKRKALARSI 743
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQN 162
A+ +I L+ ++E LR++ E + + + E + N
Sbjct: 744 ELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEALYN 785
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR QG+ M W+K KV +K E +A E+ +LTG
Sbjct: 427 RIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTG 486
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
GI+L ++ ++ YRGKN+ P
Sbjct: 487 GIILS-RNKDFLVFYRGKNFLSP 508
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 2 THDPEILTPEEHFY-FLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
T E+ PE LK+ K+ +G G+ Q + +H WK + +++ + +
Sbjct: 204 TSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDA 263
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
A +K + L + TGG+V+ N++ +YRG +Y P
Sbjct: 264 ALNMKRMHEILEKKTGGLVI-WRSGNSVSLYRGVSYKDP 301
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 93/144 (64%), Gaps = 5/144 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S +V
Sbjct: 1262 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADV 1321
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
K IA L +GGI++ + + + I+++RGKNY +P + + PR LS++KAL +S
Sbjct: 1322 KRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSS--LRPRNLLSKRKALARSIE 1379
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ 145
+A+ ++ KL +++E L+A+
Sbjct: 1380 LQRHQALSRHFAKLNRKVERLKAE 1403
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E LT EE F F K+G K Y+ +GRR +Y G I NMHLHWK + +K+IVK ++ +
Sbjct: 613 DLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQ 672
Query: 64 VKEIAAELARLTGGIVLEIHEE----NTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
VK I+ L +GG+++ + ++ +TII+YRGKNY P ++ P+ L+R++AL +S
Sbjct: 673 VKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSP--RVVRPKNLLTRRQALARS 730
Query: 120 KYRDGLRAVKKYIPKLEQELELLRAQAE 147
A+K +I LE+ + LL+++ E
Sbjct: 731 VELQRREALKHHISDLEERIGLLKSELE 758
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
LT +E F ++ R + +GR QG+ M W+ K+ +K +
Sbjct: 404 LTNKEMTNFRRLARTTAPHFALGRNRELQGLARAMVKLWETSAIAKIAIKRGVPNTCNDR 463
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+A EL +LTGG +L ++E I+ YRG ++ P
Sbjct: 464 MAEELRKLTGGTLLSRNKE-YIVFYRGNDFLPP 495
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
VG +GI Q ++ ++H W+ + +K + +K+ L GGIV+ ++I
Sbjct: 222 VGVKGITQELVASVHQKWRDAEVVKFKFGIPLSAHMKKAHQILESKIGGIVI-WRSGSSI 280
Query: 89 IMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
++YRG Y P E ++ L+++ A+D S
Sbjct: 281 VLYRGMAYKLPCIENYK-KVNLAKENAVDHS 310
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 121/207 (58%), Gaps = 18/207 (8%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K+IVK + E+
Sbjct: 626 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQ 685
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+IA L +GG+++ + + + ++I+YRGK+Y +P T + P+ L+++KAL +S
Sbjct: 686 VKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPST--LRPKNLLTKRKALARSI 743
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAET--RSENRSDAA----------EDVQNTELDKP 168
A+ +I L+ ++ +R++ E + +++ D A D +N+E++
Sbjct: 744 ELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEALYDKLDSAYPSDDENSEVEDG 803
Query: 169 DFGSIPSMMEC-SENDPTTESLMASDS 194
+ G + SEND ES + SD+
Sbjct: 804 EQGDEAYLKTYNSENDSEIESEVESDN 830
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 6 EILTPEEHF-YFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE LK+ + K+ +GR G+ Q V+ +H WK + +++ + +A +
Sbjct: 208 ELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNM 267
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTE 102
K + L R TGG+V+ N++ +YRG +Y P +
Sbjct: 268 KRMHEILERKTGGLVI-WRSGNSVSLYRGVSYEVPSVQ 304
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR QG+ + M W+ KV +K E +A E+ +LTG
Sbjct: 427 RIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTG 486
Query: 77 GIVLEIHEENTIIMYRGKNY 96
GI+L ++ ++ +RGKN+
Sbjct: 487 GILLS-RNKDFLVFFRGKNF 505
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T+ E +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S
Sbjct: 580 TNPHETITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKVKSF 639
Query: 62 EEVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
EVK IA L +GGI++ + + + I+++RGK+Y +P ++ PR LS++KAL +
Sbjct: 640 TEVKRIALSLEVESGGILVSVDKVSKGYAIVVFRGKDYRRP--SMLRPRNLLSKRKALAR 697
Query: 119 SKYRDGLRAVKKYIPKLEQELELLRAQ 145
S ++A+ ++I KL + + LR++
Sbjct: 698 SIEIQRMQALNRHIGKLNRRVNQLRSE 724
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++GR + +GR QG+ M W++ K+ +K E +A +L +LTG
Sbjct: 384 RLGRGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKIALKRGVQLTTSERMAEDLKKLTG 443
Query: 77 GIVLEIHEENTIIMYRGKNY 96
G++L + ++ YRGK++
Sbjct: 444 GVMLS-RNNDFVVFYRGKDF 462
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 92/144 (63%), Gaps = 5/144 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S +V
Sbjct: 586 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADV 645
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
K IA L +GGI++ + + + I+++RGKNY +P + + PR LS++KAL +S
Sbjct: 646 KRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSS--LRPRNLLSKRKALARSIE 703
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ 145
+A+ ++ KL +++ L+A+
Sbjct: 704 LQRHQALSRHFAKLNRKVAQLKAE 727
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
+ K+ VG G+ + ++ + WK + ++V V A ++ L R TGG+V+
Sbjct: 188 RIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVI- 246
Query: 82 IHEENTIIMYRGKNYAQPPT 101
++ +YRG +Y +P T
Sbjct: 247 WRSGTSVSLYRGVDYDEPET 266
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 96/150 (64%), Gaps = 11/150 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DP+ +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K+IVK + +
Sbjct: 629 DPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 688
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS- 119
VK++A L +GGI++ I + II+YRGK+Y +P ++ P+ L+++KAL +S
Sbjct: 689 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDYKRPT--MLRPKNLLTKRKALARSI 746
Query: 120 --KYRDGLRAVKKYIPKLEQELELLRAQAE 147
+ R+GL K+I ++ + E LRA+ E
Sbjct: 747 ELQRREGLL---KHISTMQAKAEQLRAEIE 773
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
L P+E ++ R + +GR QG+ M W+K K+ +K E
Sbjct: 418 LGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSER 477
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A +L +LTGGI+L ++ ++ YRGKN+
Sbjct: 478 MAEDLKKLTGGILLS-RNKDFLVFYRGKNF 506
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
T PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S
Sbjct: 595 TKPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSF 654
Query: 62 EEVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
+VK A L +GG+++ + + + I+++RGK+Y +P ++ PR LS++KAL +
Sbjct: 655 ADVKRTALSLEVESGGVLVSVDKVSKGYAIVVFRGKDYKRP--SMLRPRNLLSKRKALAR 712
Query: 119 SKYRDGLRAVKKYIPKLEQELELLRAQ 145
S + A+ ++I KL + + LR++
Sbjct: 713 SIELQRMEALGRHIEKLNRRVNQLRSE 739
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D EI+T EE + K+G ++ +GRR +Y G I NMHLHWK + +KVIV+ S +
Sbjct: 601 DSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQ 660
Query: 64 VKEIAAELARLTGGIVLEIHEE---NTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + II+YRGKNY P + P L+RKKA +S
Sbjct: 661 VKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFR--LRPSNLLTRKKAFARSI 718
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTEL--DKPDFGS 172
A+K ++ LE+ +ELL+ + E R+ + E+ +N L D+ DF S
Sbjct: 719 ELQRREALKYHVADLEERIELLKTGQDDDMETRNKSDEEEENLYLRVDESDFSS 772
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G + NMHLHWK + +K+IVK + ++
Sbjct: 641 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQ 700
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+ A L +GG+++ + + + I+++RGK+Y +P T + P+ L+++KAL +S
Sbjct: 701 VKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPST--LRPKNLLTKRKALARSI 758
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+ +I L++ +E LR++ E
Sbjct: 759 ELQRREALYNHISALQRNVEKLRSEIE 785
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE L+ + + KN +G G+ Q V+ + WK + +K+ + +A +
Sbjct: 217 ELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNM 276
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ I L R TGG+V+ ++ +YRG +Y P
Sbjct: 277 RRIHEILERKTGGLVI-WRSGTSVSLYRGVSYEVP 310
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR +G+ + M W++ KV +K E +A ++ +LTG
Sbjct: 442 RLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTG 501
Query: 77 GIVLEIHEENTIIMYRGKNY-AQPPTEIMSPRITLSRKKALDKSKYRDGLRAVKKYIPKL 135
G++L ++ ++ YRGKN+ + TE + R L+ KAL + + LRA P +
Sbjct: 502 GVLLS-RNKDFLVFYRGKNFLSSDVTEALLERERLA--KALQDEEEQARLRASTLITPTV 558
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D EI+T EE + K+G ++ +GRR +Y G I NMHLHWK + +KVIV+ S +
Sbjct: 643 DSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQ 702
Query: 64 VKEIAAELARLTGGIVLEIHEE---NTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + II+YRGKNY P + P L+RKKA +S
Sbjct: 703 VKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFR--LRPSNLLTRKKAFARSI 760
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTEL--DKPDFGS 172
A+K ++ LE+ +ELL+ + E R+ + E+ +N L D+ DF S
Sbjct: 761 ELQRREALKYHVADLEERIELLKTGQDDDMETRNKSDEEEENLYLRVDESDFSS 814
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 96/150 (64%), Gaps = 11/150 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K+IVK + +
Sbjct: 634 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 693
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS- 119
VK++A L +GGI++ I + II+YRG++Y +P ++ P+ L+++KAL +S
Sbjct: 694 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPT--MLRPKNLLTKRKALARSI 751
Query: 120 --KYRDGLRAVKKYIPKLEQELELLRAQAE 147
+ R+GL K+I ++ + + LRA+ E
Sbjct: 752 ELQRREGLL---KHISTMQAKAKQLRAEIE 778
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
L P+E ++ R + +GR QG+ M W+K K+ +K E
Sbjct: 423 LGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSER 482
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A +L +LTGGI+L ++ ++ YRGKN+
Sbjct: 483 MAEDLKKLTGGIMLS-RNKDFLVFYRGKNF 511
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G + NMHLHWK + +K+IVK + ++
Sbjct: 641 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQ 700
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+ A L +GG+++ + + + I+++RGK+Y +P T + P+ L+++KAL +S
Sbjct: 701 VKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPST--LRPKNLLTKRKALARSI 758
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+ +I L++ +E LR++ E
Sbjct: 759 ELQRREALYNHISALQRNVEKLRSEIE 785
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE L+ + + KN +G G+ Q V+ + WK + +K+ + +A +
Sbjct: 217 ELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNM 276
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ I L R TGG+V+ ++ +YRG +Y P
Sbjct: 277 RRIHEILERKTGGLVI-WRSGTSVSLYRGVSYEVP 310
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR +G+ + M W++ KV +K E +A ++ +LTG
Sbjct: 442 RLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTG 501
Query: 77 GIVLEIHEENTIIMYRGKNY-AQPPTEIMSPRITLSRKKALDKSKYRDGLRAVKKYIPKL 135
G++L ++ ++ YRGKN+ + TE + R L+ KAL + + LRA P +
Sbjct: 502 GVLLS-RNKDFLVFYRGKNFLSSDVTEALLERERLA--KALQDEEEQARLRASTLITPTV 558
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 96/150 (64%), Gaps = 11/150 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K+IVK + +
Sbjct: 603 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 662
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS- 119
VK++A L +GGI++ I + II+YRG++Y +P ++ P+ L+++KAL +S
Sbjct: 663 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPT--MLRPKNLLTKRKALARSI 720
Query: 120 --KYRDGLRAVKKYIPKLEQELELLRAQAE 147
+ R+GL K+I ++ + + LRA+ E
Sbjct: 721 ELQRREGLL---KHISTMQAKAKQLRAEIE 747
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
L P+E ++ R + +GR QG+ M W+K K+ +K E
Sbjct: 392 LGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSER 451
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A +L +LTGGI+L ++ ++ YRGKN+
Sbjct: 452 MAEDLKKLTGGIMLS-RNKDFLVFYRGKNF 480
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 9/206 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E ++ EE F F K+G K Y+ +GRRG++ G I NMHLHWK + +K+IV+ +
Sbjct: 776 DLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQ 835
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + II+YRGKNY +P + M P L+R++AL +S
Sbjct: 836 VKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRP--QAMRPENLLTRRQALARSV 893
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECS 180
A+K +I L++ +EL+ ++ E E +D +V K D SI + E
Sbjct: 894 ELQRYEALKHHITDLQERIELVTSELE---EMEADKKSEVYKALYSKFDDASILNEDEEG 950
Query: 181 ENDPTTESLMASDSED-LSDIFETDS 205
E +P + + ED L D+ DS
Sbjct: 951 EEEPILKVQYPNSEEDKLEDVPVYDS 976
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 16 FLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE-LARL 74
F ++ R + +GR QG+ M W++ K+ +K EI AE L RL
Sbjct: 575 FRRLARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRL 634
Query: 75 TGGIVLEIHEENTIIMYRGKNYAQP 99
TGG +L ++E I+ YRG ++ P
Sbjct: 635 TGGTLLSRNKE-YIVFYRGNDFLPP 658
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F ++G K K ++ +GRR ++ G + NMHLHWK + +K+IVK S +
Sbjct: 762 DLETVTDEERFLFRRIGLKMKAFLMLGRREVFAGTVQNMHLHWKHRELVKIIVKGKSFAQ 821
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + +II+YRGKNY +P +I+ PR L+R++A+ +S
Sbjct: 822 VKHIAISLEAESGGVLISLDKTTKGYSIIVYRGKNYKRP--QILKPRNLLTRRRAMARSI 879
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
A+ +I L Q++ L++Q
Sbjct: 880 ELQRREALNHHISILRQKIWKLKSQ 904
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR +QG+ + W+K +K+ +K + +A E+ +LTG
Sbjct: 563 RLARQTAPHFALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDRMAEEIKKLTG 622
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G+++ ++E II YRG ++ P
Sbjct: 623 GVLISRNKE-YIIFYRGNDFMTP 644
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 83/130 (63%), Gaps = 12/130 (9%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKV-IVKTFSAEEV 64
E L+ E ++ ++G K +N+ VG+RGIY GVI N+H +WK H+T+++ + S EE
Sbjct: 123 EPLSEGEAAHYARIGNKNQNFASVGKRGIYGGVIHNIHTNWKFHETVRIKCPRHNSMEET 182
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRI-TLSRK---------K 114
+ I AELARL+GGIVL++ E+ T+IM+RGKNY Q P E+ P + + R+ +
Sbjct: 183 RRIGAELARLSGGIVLDVLEDRTVIMFRGKNY-QTPEELYPPTLEAVDRRNADSRHHIQR 241
Query: 115 ALDKSKYRDG 124
ALD YR G
Sbjct: 242 ALDSQVYRLG 251
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F K+G + K ++ +GRRG++ G + NMHLHWK + +K++VK S E
Sbjct: 666 DLEGITEEERFMFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKSLEG 725
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
K++A L +GGI++ +I + +I+YRGK+Y +P T + P+ L+++KAL +S
Sbjct: 726 AKKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTT--LRPKNLLTKRKALARSL 783
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+ K+I ++ E LRA+ E
Sbjct: 784 ELQKREALIKHIEAVQTRSEQLRAEIE 810
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S +V
Sbjct: 589 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDV 648
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
K+IA L +GGI++ + + + I+++RGK+YA+P + PR LS++KAL +S
Sbjct: 649 KKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSK--LRPRNLLSKRKALARSIE 706
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ 145
A+ +I L + ++ L+A+
Sbjct: 707 IQRREALSHHIATLNRRVKKLKAE 730
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR QG+ M W+K K+ +K E +A ++ +LTG
Sbjct: 390 RLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTG 449
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L + ++ YRGK++ P
Sbjct: 450 GVMLS-RNNDFMVFYRGKDFLSP 471
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G ++ +GRR +Y G I NMHLHWK + +KVIV+ S +
Sbjct: 600 DSETITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQ 659
Query: 64 VKEIAAELARLTGGIVLEIHEE---NTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + +II+YRGKNY P + P L+RKKA +S
Sbjct: 660 VKHIAISLEAESGGVLVSVDKTMKGYSIILYRGKNYQMPFR--LRPSNLLTRKKAFARSI 717
Query: 121 YRDGLRAVKKYIPKLEQELELLR-AQAETRSENR-SDAAEDVQNTELDKPDFGS 172
A+K ++ LE+ +ELL+ Q + R R SD E+ +D+ DF S
Sbjct: 718 ELQRREALKYHVADLEERIELLKTGQDDDREPGRKSDGEEENLYLRVDESDFSS 771
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K++VK + E
Sbjct: 661 DLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEG 720
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+++A L +GGI++ +I + +I+YRGK+Y +P T + P+ L+++KAL +S
Sbjct: 721 AQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTT--LRPKNLLTKRKALARSL 778
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+ K+I ++ E LRA+ E
Sbjct: 779 ELQKREALIKHIEAIQTRSEQLRAEIE 805
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F K+G K K ++ +GRRG++ G + NMHLHWK + +K++VK + E
Sbjct: 672 DLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEG 731
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+++A L +GGI++ +I + +I+YRGK+Y +P T + P+ L+++KAL +S
Sbjct: 732 AQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTT--LRPKNLLTKRKALARSL 789
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+ K+I ++ E LRA+ E
Sbjct: 790 ELQKREALIKHIEAIQTRSEQLRAEIE 816
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
DPE +T EE F F K+G + K ++ +GRRG++ G + NMHLHWK + +K+I+K + E+
Sbjct: 522 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQ 581
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK+IA L +GGI++ + + II++RGK+Y +P + P L+++KAL +S
Sbjct: 582 VKKIALALEAESGGILVSVDRVSKGYAIIVFRGKDYQRPSK--LRPGNLLTKRKALARSI 639
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ K+I L+++++ +R
Sbjct: 640 EIQRSEALLKHISALQKKVDKIR 662
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 2 THDPEILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
T E+ PE L+ + + K+ V V G+ Q V+ ++H WK + ++V V+
Sbjct: 98 TQLAELTLPESELRRLRNLTYQIKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAP 157
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
A ++ + L R TGG+V+ ++ +YRG +Y P ++
Sbjct: 158 ALNMRRMHEILERKTGGLVI-WRSGTSVSLYRGVSYEDPSVQL 199
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F ++G K K ++ +GRR ++ G + NMHLHWK + +KV+VK S +
Sbjct: 747 DLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQ 806
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS- 119
VK IA L +GG+++ + + II+YRGKNY P +I+ PR LSR+KAL +S
Sbjct: 807 VKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKTP--QILKPRNLLSRRKALARSI 864
Query: 120 --KYRDGLRAVKKYIPKLEQELELLRAQ 145
+ R+GL +I L ++ L++Q
Sbjct: 865 ELQRREGL---NHHISNLRDKIWKLKSQ 889
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR +QG+ + W+K K+ +K + +A E+ +LTG
Sbjct: 548 RLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIRKLTG 607
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++E I+ YRG ++ P
Sbjct: 608 GVLLSRNKE-YIVFYRGNDFITP 629
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE +T EE F F K+G + K ++ +GRRG++ G I NMHLHWK + +K++VK S +V
Sbjct: 435 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDV 494
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
K+IA L +GGI++ + + + I+++RGK+YA+P + PR LS++KAL +S
Sbjct: 495 KKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSK--LRPRNLLSKRKALARS 550
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R + +GR QG+ M W+K K+ +K E +A ++ +LTG
Sbjct: 236 RLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTG 295
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L + ++ YRGK++ P
Sbjct: 296 GVMLS-RNNDFMVFYRGKDFLSP 317
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 11/148 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F ++G K K ++ +GRR ++ G + NMHLHWK + +KV+VK S +
Sbjct: 692 DLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQ 751
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS- 119
VK IA L +GG+++ + + II+YRGKNY P +I+ PR LSR+KAL +S
Sbjct: 752 VKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKTP--QILKPRNLLSRRKALARSI 809
Query: 120 --KYRDGLRAVKKYIPKLEQELELLRAQ 145
+ R+GL +I L ++ L++Q
Sbjct: 810 ELQRREGL---NHHISNLRDKIWKLKSQ 834
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR +QG+ + W+K K+ +K + +A E+ +LTG
Sbjct: 493 RLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIRKLTG 552
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++E I+ YRG ++ P
Sbjct: 553 GVLLSRNKE-YIVFYRGNDFITP 574
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F ++G K + ++ +GRR ++ G + NMHLHWK + +K+IV+ S +
Sbjct: 760 DLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIIVRGKSFAQ 819
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L + G+++ + + + II YRGKNY +P +IM PR L+R++AL +S
Sbjct: 820 VKHIAISLEAESEGVLISLDKTSKGYAIIFYRGKNYRRP--QIMKPRNLLTRRQALARSI 877
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
A+K +I L+ ++ L++Q
Sbjct: 878 ELQRREALKHHISSLQGKIWKLQSQ 902
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR +QG+ M W+K K+ +K + +A E+ +LTG
Sbjct: 561 RLSRQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTG 620
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++E I+ YRG ++ P
Sbjct: 621 GVLLSRNKE-YIVFYRGNDFIAP 642
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
+ K + VG G+ Q ++ ++H WK + +K+ + + +K L TGG+V+
Sbjct: 367 RMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVI- 425
Query: 82 IHEENTIIMYRGKNY 96
++++YRG NY
Sbjct: 426 WRSGRSVVLYRGMNY 440
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 117/206 (56%), Gaps = 12/206 (5%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
+P+ +T EE F F K+G + K ++ +GRR ++ G + NMHLHWK + +K+++K S +
Sbjct: 653 EPDSITEEERFMFRKLGLRMKAFLLLGRREVFDGTVENMHLHWKYRELVKIMIKANSFDH 712
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA +L +GG+++ I + + II+YRGK+Y +P ++ P+ L+++KAL +S
Sbjct: 713 VKNIALQLEAESGGVLVSIDKVSKGYAIIVYRGKDYKRP--SLLRPKNLLTKRKALARSI 770
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMEC- 179
A+ K+I ++ ++ L ++ E + E D ++V LD + P+ +
Sbjct: 771 ELQRHEALLKHISAMQSKVGKLNSEIE-QMEKVKDQGDEVLYNTLDS----AYPTDNDSE 825
Query: 180 SENDPTTESL-MASDSEDLSDIFETD 204
EN T E+ SD ED DI +D
Sbjct: 826 DENSDTYEAYDQDSDVEDEDDIMASD 851
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR QG+ + M W++ K+ +K E +A E+ +LTG
Sbjct: 455 RLARRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKRGVQLTTSERMAEEIKKLTG 514
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++ ++ YRGK++ P
Sbjct: 515 GMLLS-RNKDFLVFYRGKSFLSP 536
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+G G+ Q V+ +H WK + +++ + A +K + L R TGG+V+ ++
Sbjct: 258 IGGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLVI-WRSGTSL 316
Query: 89 IMYRGKNYAQPPTEIMSPRI 108
+YRG +Y P + RI
Sbjct: 317 SLYRGVSYELPEAPQFNKRI 336
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+T D E L+ E + + K+G K K ++ +GRRG++ G + NMHLHWK + +K++VKT S
Sbjct: 435 VTLDKEHLSDGERYMYRKLGLKMKAFLLLGRRGVFSGTVENMHLHWKYRELVKILVKT-S 493
Query: 61 AEEVKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALD 117
E + IA L +GGI+++I + I+MYRGKNY Q P+E + PR L++++AL
Sbjct: 494 LPEAERIAKILENESGGILVDIITTSKGQAIVMYRGKNY-QRPSE-LRPRHLLTKRQALK 551
Query: 118 KSKYRDGLRAVKKYIPKLEQELELLRA 144
+S + +++K+I L++E+E ++A
Sbjct: 552 RSLEMQRMESLEKHIRVLKKEIETMQA 578
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 19 MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGI 78
+G + + + +GR G+ G++ +H W+ + KV + +K+ +L RLTGG+
Sbjct: 44 LGLQLQGRLKIGRLGVTPGIVEAIHERWRTCEIAKVKCDAPLSMNMKKAHEDLERLTGGL 103
Query: 79 VLEIHEENTIIMYRGKNYAQP 99
V+ + ++YRGK+Y P
Sbjct: 104 VI-WRSGSAAVVYRGKDYVHP 123
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 93/148 (62%), Gaps = 13/148 (8%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
D E +T EE + F K+G + ++ +GRRG++ GVI NMHLHWK + +K+I+K E
Sbjct: 482 RDRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILK----E 537
Query: 63 EVKEIAAELARL----TGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKA 115
+ K IA E+A++ +GGI++ + + II+YRGKNY +P + PR L+++KA
Sbjct: 538 KDKAIALEVAKMLEIESGGILVGVVTTSKGQAIIVYRGKNYQRPAE--LRPRSLLTKRKA 595
Query: 116 LDKSKYRDGLRAVKKYIPKLEQELELLR 143
L +SK +A++ +I KLE+ + LR
Sbjct: 596 LARSKEIQRKKALQLHIEKLEELIMKLR 623
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 6 EILTPEEHFYFL-KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE L ++ + N + VG G+ + V+ ++H W+K + +K+ +A +
Sbjct: 77 ELTIPELELRRLQRIAIRVVNPIKVGYLGVTKAVVQDIHRRWQKCEVVKIQCDGPAAINM 136
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
K+ EL TGG+V+ I+YRGK Y
Sbjct: 137 KQTHDELETKTGGLVV-WRTGGMAILYRGKGY 167
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E+++ EE F K+G K K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 648 YDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQA 707
Query: 63 EVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V+E A L +GG+++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 708 FVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPIS--LRPRNLLTKAKALKRS 765
Query: 120 KYRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDA 156
A+ ++I +LE+ +E +++Q +++ + S++
Sbjct: 766 IAMQRHEALSQHISELERTIEQMQSQLTSKNPSYSES 802
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+G+ + +GR +QG+ + W+K K+ VK K
Sbjct: 442 LTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKL 501
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
+A E+ LTGG++L + + I++YRGK++ P+ + + TL+ ++ L K
Sbjct: 502 MADEVKTLTGGVLL-LRNKYYIVIYRGKDFL--PSSVAA---TLAERQELTK 547
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E L+ EE F F K+G K ++ +G RGI+ G + NMHLHWK + +K+IVK + +
Sbjct: 679 DLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQ 738
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + II+YRGKNY +P + P+ L++++AL +S
Sbjct: 739 VKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRP--HALRPKNLLTKRQALARSI 796
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+K +I LE+ ++LL++ E
Sbjct: 797 ELQRHEALKHHISDLEERIKLLKSLPE 823
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 2 THDPEILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
T E + PE LK + + + VG G+ Q ++ +H W+K + +K+ + S
Sbjct: 260 TRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPS 319
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +K L TGG+V+ +++++YRG Y
Sbjct: 320 SCNMKRTHEILETRTGGLVI-WRTGSSVVLYRGMAY 354
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E L+ EE F F K+G K ++ +G RGI+ G + NMHLHWK + +K+IVK + +
Sbjct: 676 DLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQ 735
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
VK IA L +GG+++ + + II+YRGKNY +P + P+ L++++AL +S
Sbjct: 736 VKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRP--HALRPKNLLTKRQALARSI 793
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE 147
A+K +I LE+ ++LL++ E
Sbjct: 794 ELQRHEALKHHISDLEERIKLLKSLPE 820
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 2 THDPEILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
T E + PE LK + + + VG G+ Q ++ +H W+K + +K+ + S
Sbjct: 257 TRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPS 316
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +K L TGG+V+ +++++YRG Y
Sbjct: 317 SCNMKRTHEILETRTGGLVI-WRTGSSVVLYRGMAY 351
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F ++G K + ++ +GRR ++ G + NMHLHWK + +K++V+ S +
Sbjct: 764 DLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIVVRGKSFAQ 823
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
K IA L + G+++ + + II YRGKNY +P +IM PR L+R++AL +S
Sbjct: 824 AKHIAISLEAESEGVLISLDKTTKGYVIIFYRGKNYRRP--QIMKPRNLLTRRQALARSI 881
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
A+K +I L+ ++ L++Q
Sbjct: 882 ELQRREALKHHISSLQGKISKLQSQ 906
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE-IAAELARLTG 76
++ R+ + +GR +QG+ M W+K K+ +K + +A E+ +LTG
Sbjct: 565 RLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMAEEIKKLTG 624
Query: 77 GIVLEIHEENTIIMYRGKNYAQP 99
G++L ++E I+ YRG ++ P
Sbjct: 625 GVLLSRNKE-FIVFYRGNDFIAP 646
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
+ K + VG G+ Q ++ ++H WK + +K+ + + +K L TGG+V+
Sbjct: 371 RMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVI- 429
Query: 82 IHEENTIIMYRGKNY 96
++++YRG NY
Sbjct: 430 WRSGRSVVLYRGMNY 444
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E L+ E + + + G K K Y+ +GRRG++ G + NMHLHWK + +K++VK A E
Sbjct: 749 DKEFLSEAERYMYRQQGLKHKGYLLLGRRGVFGGTVENMHLHWKHRELVKILVKAPIA-E 807
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
++ A L R +GGI+++I + II+YRGKNY Q P+E + PR L++++AL +S
Sbjct: 808 AQQTAKMLERESGGILVDIVNTSKGQAIIVYRGKNY-QRPSE-LRPRHLLTKRQALKRSL 865
Query: 121 YRDGLRAVKKYIPKLEQELELLRA---QAETRSENRSDAAEDVQNTELDKPDF 170
+++++K+I L E+E ++A + E + E ++A + D DF
Sbjct: 866 EVQRMQSLEKHIQILMTEIETMQAGLNKMEEQDELENEAGTQGNLEDFDATDF 918
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PE L+ +G + + + +GR G+ G++ +H W+ + KV + +
Sbjct: 322 ELTLPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVEAIHDRWRTSELAKVKCDAPLSMNM 381
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K+ +L RLTGG+V+ + ++YRGK+Y P
Sbjct: 382 KKAHEDLERLTGGLVI-WRAGSAAVVYRGKDYVHP 415
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 7/168 (4%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIV-KTFSAEEV 64
E +T EE + ++G K ++ +GRRG++ G + NMHLHWK + +K+I K S E+V
Sbjct: 541 EGITEEEKYMLRRIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNKQMSLEDV 600
Query: 65 KEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKY 121
++IA L +GGI++ + N II+YRGKNY++P + + PR L++K+AL +S
Sbjct: 601 QQIAQTLEAESGGILIAVERVNKSYAIIVYRGKNYSRPAS--LRPRTLLNKKQALKRSIE 658
Query: 122 RDGLRAVKKYIPKLEQELELLRAQ-AETRSENRSDAAEDVQNTELDKP 168
++K ++ KL++ + L+ Q A+ N + D Q ++P
Sbjct: 659 AQRCESLKLHVLKLDRNINELKHQMAKDMEANSKQTSVDNQQAIQEQP 706
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 20 GRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIV 79
G + + VG+ G+ +G++ +H W+ + ++++ + S +K L R TGG+V
Sbjct: 142 GLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKRTHDLLERKTGGLV 201
Query: 80 LEIHEENTIIMYRGKNYAQP 99
+ + II+YRG +Y P
Sbjct: 202 V-WRSGSKIILYRGTDYKYP 220
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VG+ I G+ + H++KH V VK + ++E+ ++L + T
Sbjct: 912 LKM--KKRPVLSVGKSNIVTGLAKAIKAHFQKHPLAIVNVKGRAKGTSIQEVVSKLEQET 969
Query: 76 GGIVLEIHEENTIIMYRGKNYAQPPT 101
G +++ E N +I+YRG + P+
Sbjct: 970 GAVLVS-QELNKVILYRGWGEGEKPS 994
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E ++G+ + +GR G+ + W++ + +K+ +K E+
Sbjct: 349 LTDDEMTTMRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGEL 408
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGL 125
AE + LTGG ++ ++ I+ YRGK++ PT + S I R + K K R+ L
Sbjct: 409 MAEEIKYLTGGTLIA-RDKEFIVFYRGKDFL--PTAVSSA-IEQRRSIGMYKLKTRNSL 463
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G + K ++ +GRRG++ G I NMHLHWK + +K+I K S E+V
Sbjct: 648 EVISEEERYMLRKVGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMEDVT 707
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + IIMYRGKNY +P + + P+ L++K AL +S
Sbjct: 708 YAARTLEAESGGILVAVERVSKGHAIIMYRGKNYQRPSS--LRPKSLLNKKDALKRSVEL 765
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ LR Q
Sbjct: 766 QRRKSLKLHVLNLSKNIDYLRGQ 788
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ G+ +G++ +H W+ + +K+ SA +
Sbjct: 139 ELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNM 198
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 199 RRTHEVLERKTGGLVI-WRSGSTIILYRGTNYKYP 232
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVLEIHEENT 87
+GR + GV + H+KKH V +K + V+++ +EL TG +++ E N
Sbjct: 963 IGRNNVITGVAKTIRTHFKKHPLAVVNIKNRADGTPVQQLISELEEATGSVLVS-REPNK 1021
Query: 88 IIMYRG 93
+I+YRG
Sbjct: 1022 VILYRG 1027
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK----TFS 60
P LT E ++ R + +GR QG+ ++ W++ + K+ +K
Sbjct: 449 PPKLTDREMTILRRLARPLPYHYALGRSSNLQGLAASIIKLWERCEVAKIAMKRGPYCID 508
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+E V E EL LTGG +L E +I++YRGK++
Sbjct: 509 SELVSE---ELKGLTGGTLLSRDNE-SIVLYRGKDF 540
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G K K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 586 DREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 645
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I + + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 646 VEETARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 703
Query: 121 YRDGLRAVKKYIPKLE 136
A+ ++I +LE
Sbjct: 704 AMQRHEALSQHIDQLE 719
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 19 MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGI 78
MG K+ + V + G+ Q + +H W+K + +++ A ++K + R TGG+
Sbjct: 188 MGMTLKDRITVPKAGVTQAITEKIHDAWRKSELVRLKFHEDHANDMKTAHELVERRTGGL 247
Query: 79 VLEIHEENTIIMYRGKNYAQP 99
++ + +++YRG NY +P
Sbjct: 248 II-WRAGSVMVVYRGSNYTRP 267
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ R + +GR +QG+ + W+K +K+ VK K
Sbjct: 379 LTNSELTNLRKLARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKL 438
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
++ E+ LTGG +L + + I++YRGK++ PT + +
Sbjct: 439 MSDEIKNLTGGTLL-LRNKYYIVIYRGKDFL--PTSVAA 474
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G K K+++ +GRRG++ G + NMHLHWK + +K+I K + ++V+
Sbjct: 384 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 443
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + II+YRGKNY +P T + P+ L++K AL +S
Sbjct: 444 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST--LRPKSLLNKKDALKRSVEY 501
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ L+ Q
Sbjct: 502 QRYKSLKLHVLNLSKNIDYLKDQ 524
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VGR + GV + H+KKH V +K + ++++ +EL T
Sbjct: 700 LKM--KKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEAT 757
Query: 76 GGIVLEIHEENTIIMYRG 93
G +++ E N +I+YRG
Sbjct: 758 GSVLVS-REPNKVILYRG 774
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 86/143 (60%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G K K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 43 DREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 102
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I + + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 103 VEETARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 160
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE ++ ++
Sbjct: 161 AMQRHEALSQHIDQLEINMKQMK 183
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G K K+++ +GRRG++ G + NMHLHWK + +K+I K + ++V+
Sbjct: 384 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 443
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + II+YRGKNY +P T + P+ L++K AL +S
Sbjct: 444 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST--LRPKSLLNKKDALKRSVEY 501
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ L+ Q
Sbjct: 502 QRYKSLKLHVLNLSKNIDYLKDQ 524
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VGR + GV + H+KKH V +K + ++++ +EL T
Sbjct: 700 LKM--KKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEAT 757
Query: 76 GGIVLEIHEENTIIMYRG 93
G +++ E N +I+YRG
Sbjct: 758 GSVLVS-REPNKVILYRG 774
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G K K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 589 DREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 648
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V E A L +GGI++ + + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 649 VNETARLLEYESGGILVAVERVPKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 706
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE ++ ++
Sbjct: 707 AMQRHEALSQHIAQLESNMKQMK 729
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 19 MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGI 78
MG ++ + V + G+ Q V +H W+K + +++ A ++K + R TGG+
Sbjct: 191 MGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLANDMKTAHELVERRTGGL 250
Query: 79 VLEIHEENTIIMYRGKNYAQP 99
++ + +++YRG NY +P
Sbjct: 251 II-WRAGSVMVVYRGNNYTRP 270
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT E K+ R + +GR +QG+ + W+K +K+ VK E+
Sbjct: 382 LTNAELTNLRKLARSLPCHFALGRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNEL 441
Query: 68 AA-ELARLTGGIVLEIHEENTIIMYRGKNY 96
+ E+ +LTGG +L + + I++YRGK++
Sbjct: 442 MSDEIKKLTGGTLL-LRNKYFIVIYRGKDF 470
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + ++G K K ++ +GRRG++ G + NMHLHWK + +K+I S E
Sbjct: 553 DKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQESVEY 612
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+ A L +GGI++ + N II+YRGKNY++P + + PR L++K+AL +S
Sbjct: 613 AHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDS--LRPRTLLNKKQALKRSI 670
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
A+K ++ KL++ + L+ Q
Sbjct: 671 EAQRREALKLHVLKLDKNINELKHQ 695
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT E ++G + K + VG+ G+ +G++ +H W++ + ++V+ + +K
Sbjct: 151 LTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDLCRINMKRT 210
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L R TGG+V+ + II+YRG +Y P
Sbjct: 211 HDILERKTGGLVV-WRSGSKIILYRGIDYKYP 241
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT +E ++GR + +GR QGV + W++ + + + VK ++
Sbjct: 369 LTDDEMTTLKRLGRTLPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRK 428
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A E+ LTGG +L ++E I++YRGK++
Sbjct: 429 MAEEIKYLTGGTLLSRNKE-VIVIYRGKDF 457
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E ++ +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I K E+V+
Sbjct: 529 ETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVE 588
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ ++ + + II+YRGKNY +P + P+ LS++ AL +S
Sbjct: 589 YAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK--LRPKTLLSKRDALKRSLEN 646
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ KL + ++ LR Q
Sbjct: 647 QRCKSLKVHVLKLSKNIDYLRDQ 669
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 43 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 102
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 103 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYTYP 136
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 333 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 392
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
E I E+ LTGG +L +E +I+ YRGK++ P + + +++ L S
Sbjct: 393 SELITEEVKELTGGTLLSRDKE-SIVFYRGKDFLPPAVS-----LAIEKRRKLGSSTIYK 446
Query: 124 GLRAVKKYIP-------KLEQELEL-LRAQAETRSENRSDAAEDV 160
+++ +P K+ ++ + +R + + +ENR+++ V
Sbjct: 447 AKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTV 491
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVL 80
K + + +GR GV + H+KKH V +K + ++++ +EL TG +++
Sbjct: 828 KKRPVLSIGRNNAITGVAKTIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLV 887
Query: 81 EIHEENTIIMYRG 93
E N +I+YRG
Sbjct: 888 S-RETNKVILYRG 899
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G K K+++ +GRRG++ G + NMHLHWK + +K+I K + ++V+
Sbjct: 578 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 637
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + II+YRGKNY +P T + P+ L++K AL +S
Sbjct: 638 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST--LRPKSLLNKKDALKRSVEY 695
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ L+ Q
Sbjct: 696 QRYKSLKLHVLNLSKNIDYLKDQ 718
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ G + +N + VG+ G+ +G++ +H W+ + +K+ SA +
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ +TII+YRG +Y P
Sbjct: 198 KRTHEILERKTGGLVI-WRSGSTIILYRGTDYKYP 231
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VGR + GV + H+KKH V +K + ++++ +EL T
Sbjct: 894 LKM--KKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEAT 951
Query: 76 GGIVLEIHEENTIIMYRG 93
G +++ E N +I+YRG
Sbjct: 952 GSVLVS-REPNKVILYRG 968
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G + K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 594 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 653
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I +I YRGKNY +P + PR L++ KAL ++
Sbjct: 654 VEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 711
Query: 121 YRDGLRAVKKYIPKLEQEL 139
A+ ++I +LE +
Sbjct: 712 AMQRHEALSQHIAELENNI 730
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 11 EEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE 70
EE ++G ++ + V + G+ Q V +H W+K + +++ A ++K
Sbjct: 188 EELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHEL 247
Query: 71 LARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ R TGG+++ + +++YRG NY +P
Sbjct: 248 VERRTGGLII-WRSGSVMVVYRGSNYKRP 275
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ R + +GR +QG+ + W+K +K+ VK K
Sbjct: 387 LTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKL 446
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
++ E+ LTGG +L + + I++YRGK++ PT + +
Sbjct: 447 MSEEIKNLTGGTLL-LRNKYYIVIYRGKDFL--PTSVAA 482
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G + K ++ +GRRGI+ G + NMHLHWK + +K+I S E+
Sbjct: 602 DKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIED 661
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+ +A L +GGI++ + + IIMYRGKNY +P + + P+ L++++AL +S
Sbjct: 662 IHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPAS--LRPQTLLNKREALKRSL 719
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETR---SENRSDAAEDVQNTELDKPDFGSIPSMM 177
++K ++ +L + ++ L+ Q +R E S D L + +G+ ++
Sbjct: 720 EAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVILI 779
Query: 178 ECSEN-DPTTESLMASDSEDLSDIFETDSETETEE 211
S+ D + +SL S ++ D F + +++T+E
Sbjct: 780 HSSDGMDSSRDSLQTSHNDKRID-FPSMCDSDTDE 813
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PEE LK +G + + + VG+ GI +G++ +H W++ + +K+ + +
Sbjct: 183 ELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNM 242
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ + II+YRG NY P
Sbjct: 243 KRTHDILERKTGGLVI-WRSGSYIILYRGANYKYP 276
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E ++GR + +GR QG+ +M W+K + K+ VK E+
Sbjct: 405 LTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEM 464
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
AE L LTGG +L + I+ YRGK++ P +S I RK + + K
Sbjct: 465 MAEELKNLTGGTLLS-RDREFIVFYRGKDFLPP---AVSSAIEARRKYGIHRGK 514
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVL 80
K + + VGR I GV + H++KH V VK + V+E+ +L + TG +++
Sbjct: 915 KKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLV 974
Query: 81 EIHEENTIIMYRG 93
E + +I+YRG
Sbjct: 975 S-QEPSKVILYRG 986
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E ++ EE + K+G + K ++ +GRRG++ G I NMHLHWK + +K+I K S ++V+
Sbjct: 634 EHISDEERYMLRKIGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMKDVE 693
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + IIMYRGKNY +P T + P+ L+++ AL +S
Sbjct: 694 YAARTLESQSGGILVAVERVSKGHAIIMYRGKNYHRPST--LRPKSLLNKRDALKRSVEY 751
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ LR Q
Sbjct: 752 QRQKSLKLHVLNLSKNIDYLRGQ 774
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ G+ +G++ +H W+ + +K+ SA +
Sbjct: 137 ELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCDDVSAMNM 196
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 197 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYKYP 230
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK----TFS 60
P LT E ++ R + +GR QG+ ++M W++ + K+ +K
Sbjct: 439 PSKLTDREMTILRRLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCID 498
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
+E V E EL LTGG +L + +I+ YRGK++ P +
Sbjct: 499 SELVSE---ELKGLTGGTLLS-RDNKSIVFYRGKDFLSPAVSL 537
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 30/121 (24%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVP----------------------------VGRRG 33
+ D EI+ P + K+ KC Y+P +GR
Sbjct: 891 SRDVEIVKPCQALDEPKLDEKCTPYLPFRTAPLSNRERLMLRKQALKMKKRPVLAIGRNN 950
Query: 34 IYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVLEIHEENTIIMYR 92
+ GV + H+KKH V +K + V+++ +EL R TG +++ E N +I+YR
Sbjct: 951 VITGVAKTIQTHFKKHPLAIVNIKNRADGTPVQQLISELERATGSVLVS-REPNKVILYR 1009
Query: 93 G 93
G
Sbjct: 1010 G 1010
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E ++ +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I K E+V+
Sbjct: 626 ETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVE 685
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ ++ + + II+YRGKNY +P + P+ LS++ AL +S
Sbjct: 686 YAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK--LRPKTLLSKRDALKRSLEN 743
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ KL + ++ LR Q
Sbjct: 744 QRCKSLKVHVLKLSKNIDYLRDQ 766
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 140 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 199
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 200 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYTYP 233
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 430 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 489
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
E I E+ LTGG +L ++ +I+ YRGK++ P + + +++ L S
Sbjct: 490 SELITEEVKELTGGTLLS-RDKESIVFYRGKDFLPPAVS-----LAIEKRRKLGSSTIYK 543
Query: 124 GLRAVKKYIP-------KLEQELEL-LRAQAETRSENRSDAAEDV 160
+++ +P K+ ++ + +R + + +ENR+++ V
Sbjct: 544 AKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTV 588
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVLEIHEENT 87
+GR GV + H+KKH V +K + ++++ +EL TG +++ E N
Sbjct: 932 IGRNNAITGVAKTIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVS-RETNK 990
Query: 88 IIMYRG 93
+I+YRG
Sbjct: 991 VILYRG 996
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G + K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 397 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 456
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I +I YRGKNY +P + PR L++ KAL ++
Sbjct: 457 VEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 514
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE + ++
Sbjct: 515 AMQRHEALSQHIAELENNIRQMK 537
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ R + +GR +QG+ + W+K +K+ VK K
Sbjct: 190 LTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKL 249
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
++ E+ LTGG +L + + I++YRGK++ PT + +
Sbjct: 250 MSEEIKNLTGGTLL-LRNKYYIVIYRGKDFL--PTSVAA 285
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
++ + V + G+ Q V +H W+K + +++ A ++K + R TGG+++
Sbjct: 3 LRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLII-W 61
Query: 83 HEENTIIMYRGKNYAQP 99
+ +++YRG NY +P
Sbjct: 62 RSGSVMVVYRGSNYKRP 78
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G K K+++ +GRRG++ G + NMHLHWK + +K+I K + ++V+
Sbjct: 614 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 673
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + II+YRGKNY +P T + P+ L++K AL +S
Sbjct: 674 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST--LRPKSLLNKKDALKRSVEY 731
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ L+ Q
Sbjct: 732 QRYKSLKLHVLNLSKNIDYLKDQ 754
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ G + +N + VG+ G+ +G++ +H W+ + +K+ SA +
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ +TII+YRG +Y P
Sbjct: 198 KRTHEILERKTGGLVI-WRSGSTIILYRGTDYKYP 231
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ R + +GR QG+ +M W++ + KV +K AE +
Sbjct: 412 PPRLTDREMTILRRLARPLPYHYALGRSSNLQGLAASMIKLWERCEVAKVAIKR-GAENI 470
Query: 65 KE--IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
I+ +L LTGG +L E +I+ YRGK++ PT +
Sbjct: 471 DSDLISEKLKGLTGGTLLSRDNE-SIVFYRGKDFL--PTAV 508
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VGR + GV + H+KKH V +K + ++++ +EL T
Sbjct: 930 LKM--KKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEAT 987
Query: 76 GGIVLEIHEENTIIMYRG 93
G +++ E N +I+YRG
Sbjct: 988 GSVLVS-REPNKVILYRG 1004
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E+++ EE + K+G K K+++ +GRRG++ G + NMHLHWK + +K+I K + ++V+
Sbjct: 578 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 637
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ + + + II+YRGKNY +P T + P+ L++K AL +S
Sbjct: 638 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST--LRPKSLLNKKDALKRSVEY 695
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ L + ++ L+ Q
Sbjct: 696 QRYKSLKLHVLNLSKNIDYLKDQ 718
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ G + +N + VG+ G+ +G++ +H W+ + +K+ SA +
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ +TII+YRG +Y P
Sbjct: 198 KRTHEILERKTGGLVI-WRSGSTIILYRGTDYKYP 231
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 17 LKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLT 75
LKM K + + VGR + GV + H+KKH V +K + ++++ +EL T
Sbjct: 894 LKM--KKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEAT 951
Query: 76 GGIVLEIHEENTIIMYRG 93
G +++ E N +I+YRG
Sbjct: 952 GSVLVS-REPNKVILYRG 968
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F ++G + K Y+PVG RG++ GVI NMHLHWK + +K+I K +
Sbjct: 597 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 656
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 657 VEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAV 714
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE + ++
Sbjct: 715 AMQRHEALSQHIAELENNIRQMK 737
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 11 EEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE 70
EE ++G ++ + V + G+ Q V +H W+K + +++ A ++K
Sbjct: 191 EELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHEL 250
Query: 71 LARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ R TGG+++ + +++YRG NY +P
Sbjct: 251 VERRTGGLII-WRSGSVMVVYRGSNYKRP 278
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ R + +GR +QG+ + W+K +K+ VK K
Sbjct: 390 LTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKL 449
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
++ E+ LTGG +L + + I++YRGK++ PT + +
Sbjct: 450 MSEEIKNLTGGTLL-LRNKYYIVIYRGKDFL--PTSVAA 485
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G + K ++ +GRRGI+ G + NMHLHWK + +K+I S E+
Sbjct: 602 DKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIED 661
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+ +A L +GGI++ + + IIMYRGKNY +P + + P+ L++++AL +S
Sbjct: 662 IHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPAS--LRPQTLLNKREALKRSL 719
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETR---SENRSDAAEDVQNTELDKPDFGSIPSMM 177
++K ++ +L + ++ L+ Q +R E S D L + +G+ ++
Sbjct: 720 EAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVILI 779
Query: 178 ECSEN-DPTTESLMASDSEDLSDIFETDSETETEE 211
S+ D + +SL S ++ D F + +++T+E
Sbjct: 780 HSSDGMDSSRDSLQTSHNDKRID-FPSMCDSDTDE 813
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PEE LK +G + + + VG+ GI +G++ +H W++ + +K+ + +
Sbjct: 183 ELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNM 242
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ + II+YRG NY P
Sbjct: 243 KRTHDILERKTGGLVI-WRSGSYIILYRGANYKYP 276
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E ++GR + +GR QG+ +M W+K + K+ VK E+
Sbjct: 405 LTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEM 464
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
AE L LTGG +L + I+ YRGK++ P +S I RK + + K
Sbjct: 465 MAEELKNLTGGTLLS-RDREFIVFYRGKDFLPP---AVSSAIEARRKYGIHRGK 514
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVL 80
K + + VGR I GV + H++KH V VK + V+E+ +L + TG +++
Sbjct: 915 KKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLV 974
Query: 81 EIHEENTIIMYRG 93
E + +I+YRG
Sbjct: 975 S-QEPSKVILYRG 986
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E+++ EE F K+G K K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 648 YDQEVISEEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKNLA 707
Query: 63 EVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V++ A L +GG+++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 708 FVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPIS--LRPRNLLTKAKALKRS 765
Query: 120 KYRDGLRAVKKYIPKLEQELELLRAQAETRSENRS 154
A+ ++I +LE+ +E ++++ +++ + S
Sbjct: 766 IAMQRHEALSQHISELERTIEQMQSELTSKTPSYS 800
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+G+ + +GR +QG+ + W+K K+ VK K
Sbjct: 442 LTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKL 501
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
+A E+ LTGG++L + + I++YRGK++ P+ + + TL+ ++ L K
Sbjct: 502 MADEVKALTGGVLL-LRNKYYIVIYRGKDFL--PSSVAA---TLAERQELTK 547
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I +S E
Sbjct: 575 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEA 634
Query: 64 VKEIAAELARLTGGIVLE---IHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
++A L +GGI++ + + II+YRGKNY +P + + P+ LS+++AL +S
Sbjct: 635 AHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERP--QCLRPQTLLSKREALKRSV 692
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ KL +E L Q
Sbjct: 693 EAQRRKSLKLHVLKLSNNIEELNRQ 717
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L P E +G + + +G+ GI +G++ +H W+ + +K+ + S +K
Sbjct: 166 LPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRT 225
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L TGG+V+ + I++YRG NY P
Sbjct: 226 HDVLETKTGGLVI-WRSGSKILLYRGVNYQYP 256
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E ++GR + +GR QG+ + + W+K + K+ VK E+
Sbjct: 378 LTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSEL 437
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNY 96
AE L LTGG ++ +++ I++YRGK++
Sbjct: 438 MAEELKWLTGGTLIS-RDKDFIVLYRGKDF 466
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVP--VGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEV 64
L+ E K K K P VGR + G+ + +H++K+ V VK + V
Sbjct: 875 LSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSV 934
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
+E+ A+L TG +++ E + +I+YRG
Sbjct: 935 QEVIAKLKEETGALLVS-QEPSKVILYRG 962
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E +T EE F K+G + K Y+P+G RG++ GV+ NMHLHWK + +K++ K +
Sbjct: 584 YDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTLA 643
Query: 63 EVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V++ A L +GGI++ I +E +I YRGKNY +P T + PR L++ KAL +
Sbjct: 644 FVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPIT--LRPRNLLTKGKALKRH 701
Query: 120 KYRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE+ +E ++
Sbjct: 702 VAMQRHEALSQHITELEKTIEQMK 725
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT E K+ + + VGR +QG+ + W+K K+ VK E+
Sbjct: 378 LTNAEMTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNEL 437
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
AE L LTGG +L + + I++YRGK++ PT + +
Sbjct: 438 MAEELKMLTGGTLL-LRNKYFIVIYRGKDFV--PTSVAA 473
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I +S E
Sbjct: 584 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEA 643
Query: 64 VKEIAAELARLTGGIVLE---IHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
++A L +GGI++ + + II+YRGKNY +P + + P+ LS+++AL +S
Sbjct: 644 AHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERP--QCLRPQTLLSKREALKRSV 701
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ KL +E L Q
Sbjct: 702 EAQRRKSLKLHVLKLSNNIEELNRQ 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L P E +G + + +G+ GI +G++ +H W+ + +K+ + S +K
Sbjct: 166 LPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRT 225
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L TGG+V+ + I++YRG NY P
Sbjct: 226 HDVLETKTGGLVI-WRSGSKILLYRGVNYQYP 256
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT--------F 59
LT +E ++GR + +GR QG+ + + W+K + K+ VK
Sbjct: 378 LTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSEL 437
Query: 60 SAEEVKEIAAELA--RLTGGIVLEIHEENTIIMYRGKNY 96
AEE+K + L LTGG ++ +++ I++YRGK++
Sbjct: 438 MAEELKVVGLLLVIKWLTGGTLIS-RDKDFIVLYRGKDF 475
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVP--VGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEV 64
L+ E K K K P VGR + G+ + +H++K+ V VK + V
Sbjct: 884 LSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSV 943
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
+E+ A+L TG +++ E + +I+YRG
Sbjct: 944 QEVIAKLKEETGALLVS-QEPSKVILYRG 971
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F ++G + K Y+ +G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 620 DQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAF 679
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V++ A L +GGI++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 680 VEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVS--LRPRNLLTKAKALKRSV 737
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECS 180
A+ ++I +LE+ +E ++ + +++ +D +TE G + E
Sbjct: 738 AMQRHEALSQHISELERTIEQMKMEI---GDSKDAEDKDSWSTE----GHGQFDQVSESE 790
Query: 181 ENDPTTESLMASDSEDLSDIFETDSE 206
+ S M SD++D+ DI D E
Sbjct: 791 DE----ASGMDSDADDVEDIDWKDDE 812
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 11 EEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE 70
EE ++G + + V + GI Q V+ +H W+K + +++ A ++K
Sbjct: 217 EELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEI 276
Query: 71 LARLTGGIVLEIHEENTIIMYRGKNYAQPP 100
+ R TGG+V + ++++RG NY PP
Sbjct: 277 VERRTGGLV-TWRSGSVMVVFRGTNYEGPP 305
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ + + +GR +QG+ + W+K +K+ VK K
Sbjct: 412 LTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKL 471
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI---MSPRITLSRKKALDKSKYRD 123
+A E+ LTGG++L + + I++YRGK++ PT + +S R L++ + + K R
Sbjct: 472 MAEEIKNLTGGVLL-LRNKYYIVIYRGKDFL--PTSVAAALSEREELTKHIQVVEEKVRT 528
Query: 124 G 124
G
Sbjct: 529 G 529
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E ++ +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I K E+V+
Sbjct: 631 ETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVE 690
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYR 122
A L +GGI++ ++ + + II+YRGKNY +P + P+ LS++ AL +S
Sbjct: 691 YAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYQRPSK--LRPKTLLSKRDALKRSVEN 748
Query: 123 DGLRAVKKYIPKLEQELELLRAQ 145
+++K ++ KL + ++ L+ Q
Sbjct: 749 QRCKSLKVHVLKLSKNIDYLKDQ 771
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 142 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 201
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 202 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYKYP 235
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 435 PPKLTDREMTILRRLAHPLPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 494
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
E I E+ LTGG +L ++ +I+ YRGK++ P +
Sbjct: 495 SELITEEIKDLTGGTLLS-RDKESIVFYRGKDFLPPAVSL 533
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E +T EE F +G + K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 517 YDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLA 576
Query: 63 EVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V++ A L +GGI++ I + ++I YRGKNY +P T + PR L++ KAL +S
Sbjct: 577 FVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRRPMT--LRPRNLLTKAKALQRS 634
Query: 120 KYRDGLRAVKKYIPKLEQELE 140
A+ +++ +L +++E
Sbjct: 635 VVMQRHEALSQHVTELGEKIE 655
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E K+ + + +GR QG+ + W+K K+ VK E+
Sbjct: 311 LTNDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNEL 370
Query: 68 AA-ELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
A EL LTGG +L + + I++YRGK++ PT + +
Sbjct: 371 MAQELKALTGGTLL-LRNKYYIVIYRGKDFV--PTSVAA 406
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
+ L EE +G K + + + G+ + V+ +H HW + +++ F A+ +K
Sbjct: 142 QTLVEEELRRLRTLGMSLKEKITIPKAGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMK 201
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ T G+V+ + + +YRGKNY P
Sbjct: 202 LAHQIVEHRTRGLVI-WRSGSYMWVYRGKNYQGP 234
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
++T EE F ++G + K Y+P+G RG++ GVI NMHLHWK + +K+I K + V+E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 67 IAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
A LA +GGI++ I + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAVAMQ 118
Query: 124 GLRAVKKYIPKLEQ-----ELELLRAQAETRSENRSDAAEDVQNT 163
A+ ++I +LE +L+L E + E+ SD+ + N
Sbjct: 119 RHEALSQHIDQLESNIKQMKLDLGIEDYEEQDEDSSDSENEYDNA 163
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E +T EE F K+G + K Y+P+G RG++ GV+ NMHLHWK + +K++ K +
Sbjct: 584 YDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTVA 643
Query: 63 EVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V++ A L +GGI++ I +E +I YRGKNY +P T + PR L++ KAL +
Sbjct: 644 FVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPIT--LRPRNLLTKGKALKRH 701
Query: 120 KYRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LE+ +E ++
Sbjct: 702 VAMQRHEALSQHITELEKTIEQMK 725
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT E K+ + + +GR +QG+ + W+K K+ VK E+
Sbjct: 378 LTNAEMTNLRKLAKSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNEL 437
Query: 68 AAE-LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
AE L LTGG +L + + I++YRGK++ PT + +
Sbjct: 438 MAEELKMLTGGTLL-LRNKYFIVIYRGKDFV--PTSVAA 473
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 1 MTHDPEI----LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIV 56
M+ PEI +T EE + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I
Sbjct: 568 MSQQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIIC 627
Query: 57 KTFSAEEVKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRK 113
K S V E+A L +GGI++ + + I++YRGKNY +P ++ P LS++
Sbjct: 628 KERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRP--ALLRPPTLLSKR 685
Query: 114 KALDKS 119
+A+ +S
Sbjct: 686 EAMKRS 691
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
L+ EE ++G K + VG+ GI +G++ +H W++ + +K++ + +K
Sbjct: 158 LSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRT 217
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L R TGG+V+ + I++YRG NY P
Sbjct: 218 HDLLERKTGGLVV-WRAGSKIVLYRGVNYIYP 248
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
ILT +E ++GR + +GR QG+ ++ W+K + K+ VK E
Sbjct: 375 ILTNDEMTTLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSE 434
Query: 67 IAAE-LARLTGGIVLEIHEENTIIMYRGKNY 96
+ AE L RLTGG +L + I++YRGK++
Sbjct: 435 MMAEELKRLTGGTLLS-RDREFIVLYRGKDF 464
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 8 LTPEEHFYFLKMGRKCKN--YVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEV 64
L+ + K K KN + VGR I GV + H+KK+ V VK + V
Sbjct: 861 LSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSV 920
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
+E+ +L + TGG+++ E + +I+YRG
Sbjct: 921 QEVVFQLEQATGGVLVS-QEPSKVILYRG 948
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F F ++G + K Y+ +G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 620 DQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAF 679
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V++ A L +GGI++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 680 VEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVS--LRPRNLLTKAKALKRSV 737
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
A+ ++I +LE+ +E ++ +
Sbjct: 738 AMQRHEALSQHISELERTIEQMKME 762
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 18 KMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGG 77
++G + + V + GI Q V+ +H W+K + +++ A ++K + R TGG
Sbjct: 224 RLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGG 283
Query: 78 IVLEIHEENTIIMYRGKNYAQPP 100
+V + ++++RG NY PP
Sbjct: 284 LV-TWRSGSVMVVFRGTNYEGPP 305
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ + + +GR +QG+ + W+K +K+ VK K
Sbjct: 412 LTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKL 471
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI---MSPRITLSRKKALDKSKYRD 123
+A E+ LTGG++L + + I++YRGK++ PT + +S R L++ + + K R
Sbjct: 472 MAEEIKNLTGGVLL-LRNKYYIVIYRGKDFL--PTSVAAALSEREELTKHIQVVEEKVRT 528
Query: 124 G 124
G
Sbjct: 529 G 529
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE F ++G + Y+P+G RG++ GV+ NMHLHWK + +K+I K +
Sbjct: 347 DQETITDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAF 406
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+E A L +GGI++ I + ++ YRGKNY +P + PR L++ KAL +S
Sbjct: 407 VEETARLLEYESGGILVSIDRVPKGYALVYYRGKNYRRPIA--LRPRNLLTKAKALKRSV 464
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
A+ ++I +LEQ +E ++
Sbjct: 465 AMQRHEALSQHISELEQNIEQMK 487
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ + + +GR +QG+ + + W+K +K+ VK K
Sbjct: 141 LTNAEMTQMRKLAKSLPCHFALGRNRNHQGLAVAILKLWEKSLVVKIAVKRGIQNTNNKL 200
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
+A E+ LTGG++L + + I++YRGK++ P +
Sbjct: 201 MAEEIGNLTGGVLL-LRNKYFIVIYRGKDFLPPSVAV 236
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 5/144 (3%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E +T EE F ++G + K Y+ +G RG++ GVI NMHLHWK + +K++ K +
Sbjct: 616 YDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKNRA 675
Query: 63 EVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V++ A L +GGI++ I +E II YRGKNY +P T + PR L++ KAL +S
Sbjct: 676 FVEDTARLLEYESGGILVAIEKVSKEFAIIYYRGKNYKRPLT--LRPRNLLTKAKALKRS 733
Query: 120 KYRDGLRAVKKYIPKLEQELELLR 143
A+ +I +LE +E ++
Sbjct: 734 VAMLRHEALSNHITELETTIEQMK 757
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 20 GRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIV 79
G + V V + G+ Q V+ +H W+K + +++ A+ ++ + R TGG+V
Sbjct: 225 GMHLRERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIVERRTGGLV 284
Query: 80 LEIHEENTIIMYRGKNYAQP 99
+ +I+YRGKNY P
Sbjct: 285 -TWRAGSVMIVYRGKNYQGP 303
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E ++ EE F ++G + K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 607 DQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAF 666
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V++ A L +GG+++ I + +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 667 VEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNYRRPIS--IRPRNLLTKAKALKRSV 724
Query: 121 YRDGLRAVKKYIPKLEQELE 140
A+ ++I +LE+ +E
Sbjct: 725 AMQRHEALSQHIFELEKNIE 744
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 11 EEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE 70
EE +MG + + + + GI V+ N+H W+K + +++ A ++K
Sbjct: 204 EELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEI 263
Query: 71 LARLTGGIVLEIHEENTIIMYRGKNYAQPPTEI 103
+ R TGG+V+ + ++++RG NY PP+++
Sbjct: 264 VERRTGGLVI-WRAGSVMVVFRGTNYQGPPSKL 295
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ + + +GR +QG+ + + W+K K+ VK K
Sbjct: 400 LTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 459
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG++L + + I+++RGK++
Sbjct: 460 MADELKMLTGGVLL-LRNKYYIVIFRGKDF 488
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G K K ++ +G RG++ G I NMHLHWK + +K+I K S +
Sbjct: 579 DKEGITEEERYMLRKIGLKMKPFLLMGERGVFDGTIENMHLHWKYRELVKIICKEKSFQA 638
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V+ +A L +GGI++ + + II+YRGKNY +P + P LS+++A+ +S
Sbjct: 639 VQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYTRP--ACLRPPTLLSKRQAMKRSL 696
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
++K ++ +L ++ L+ Q
Sbjct: 697 EAQRRESLKLHVLRLTSNIDHLKLQ 721
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P E L+ +G K + VG+ GI +G++ +H W++ + +K++ + +
Sbjct: 159 ELSLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNM 218
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ + I++YRG +Y P
Sbjct: 219 KRTHDLLERKTGGLVV-WRVGSKIVLYRGADYKYP 252
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +E ++GR + +GR +QG+ ++ W+K + K+ VK E+
Sbjct: 381 LTNDEMTTLKRLGRPLPCHFALGRNTKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEL 440
Query: 68 AA-ELARLTGGIVLEIHEENTIIMYRGKNY 96
A EL LTGG +L + I++YRGK++
Sbjct: 441 MAQELKWLTGGTLLS-RDREFIVLYRGKDF 469
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 7 ILTPEEHFYFLKMGRKCKN--YVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEE 63
L+ + K K KN + VGR I GV + H+++H V VK +
Sbjct: 866 CLSNRDRLLLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFQRHPFAIVHVKGRAKGTS 925
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
V+E+ ++L TG +++ E + +I+YRG +P
Sbjct: 926 VQEVVSKLEEATGAVLVS-QEPSKVILYRGWGAGEP 960
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G + K ++ +GRRGI+ G + NMHLHWK + +K+I S E+
Sbjct: 977 DKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIED 1036
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ +A L +GGI++ + + IIMYRGKNY +P + + P+ L++++A+ +S
Sbjct: 1037 IHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPAS--LRPQTLLNKREAMKRS 1093
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ PEE LK +G + + + VG+ GI +G++ +H W++ + +K+ + +
Sbjct: 375 ELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNM 434
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
K L R TGG+V+ + II+YRG NY P
Sbjct: 435 KRTHDILERKTGGLVI-WRSGSYIILYRGANYKYP 468
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVKEIAAELARLTGGIVLEIHEE 85
+ VGR I GV + H++KH V VK + V+E+ +L + TG +++ E
Sbjct: 1275 IAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVVFKLEQATGAVLVS-QEP 1333
Query: 86 NTIIMYRG 93
+ +I+YRG
Sbjct: 1334 SKVILYRG 1341
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 10/146 (6%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
++T EE F ++G + K Y+P+G RG++ GVI NMHLHWK + +K+I K + V+E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 67 IAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
A LA +GGI++ I + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRAVAMQ 118
Query: 124 GLRAVKKYIPKLE-----QELELLRA 144
A+ ++I +LE +L+LLR
Sbjct: 119 RHEALSQHIDQLESNIKQMKLDLLRT 144
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G + K ++ +GRRG++ G + NMHLHWK + +K+I S +
Sbjct: 597 DKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKT 656
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V ++A L +GGI++ + II++RGKNY +P + P L++K+AL +S
Sbjct: 657 VHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSR--LRPESLLNKKEALKRSI 714
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
+++K ++ KL Q +E L+
Sbjct: 715 EAQRRKSLKLHVLKLTQNVEELK 737
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT EE +G + K + VG+ GI +G++ +H W++ + +K+ + +K
Sbjct: 184 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRT 243
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L R TGGIV+ + II+YRG NY P
Sbjct: 244 HDLLERKTGGIVV-WRSGSKIILYRGPNYIYP 274
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + K+G + K ++ +GRRG++ G + NMHLHWK + +K+I S +
Sbjct: 576 DKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKT 635
Query: 64 VKEIAAELARLTGGIVLEIHEEN---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V ++A L +GGI++ + II++RGKNY +P + P L++K+AL +S
Sbjct: 636 VHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSR--LRPESLLNKKEALKRSI 693
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
+++K ++ KL Q +E L+
Sbjct: 694 EAQRRKSLKLHVLKLTQNVEELK 716
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT EE +G + K + VG+ GI +G++ +H +W++ + +K+ + +K
Sbjct: 164 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRT 223
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
L R TGGIV+ + II+YRG NY P
Sbjct: 224 HDLLERKTGGIVV-WRSGSKIILYRGPNYIYP 254
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E ++ +E + K+G K K ++ +GRRG++ G I NMHLHWK + +K+I K E+V+
Sbjct: 619 ETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVE 678
Query: 66 EIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS--- 119
A L +GGI++ ++ + + II+YRGKNY +P + P+ LS++ AL +S
Sbjct: 679 YAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK--LRPKTLLSKRDALKRSLEN 736
Query: 120 -KYRDGLRAVKKYIPKLEQELELL 142
+ + L ++ Y P +E E+L
Sbjct: 737 QRCKVWLISLNFYDPFVEILFEIL 760
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 133 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 192
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 193 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYTYP 226
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 423 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 482
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
E I E+ LTGG +L ++ +I+ YRGK++ P + + +++ L S
Sbjct: 483 SELITEEVKELTGGTLLS-RDKESIVFYRGKDFLPPAVS-----LAIEKRRKLGSSTIYK 536
Query: 124 GLRAVKKYIP-------KLEQELEL-LRAQAETRSENRSDAAEDV 160
+++ +P K+ ++ + +R + + +ENR+ + V
Sbjct: 537 AKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAGSLNTV 581
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F ++GRK V +GRRGI+ GVI +H HWK + +KVI K A +
Sbjct: 573 DRELLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQ 632
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ A L TGGI++ + + T II+YRGKNY +P S L++++AL +S
Sbjct: 633 IMYTANLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSN--LLTKREALRRS 689
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 363 LADEELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKVGIQNTNNEQ 422
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG V+ + ++ +I+YRGK++
Sbjct: 423 MAWNLKHLTGGTVI-LRNKDFVILYRGKDF 451
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E ++ EE + ++G K ++ +GRRG++ G + NMHLHWK + +K+I S EE
Sbjct: 559 DKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNG-SLEE 617
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V +IA L +GGI++ + + II+YRGKNY+ P + P+ L++++AL +S
Sbjct: 618 VHQIALTLEAESGGILVAVERVRKGFAIIVYRGKNYSVP--VCLRPQTLLNKRQALKRSI 675
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQ 145
++K I L++E+ L+ Q
Sbjct: 676 EAQRRESLKLRILTLDKEINELKLQ 700
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT +E ++G+ + +GR QG+ + W++ + +K+ VK K
Sbjct: 369 LTDDEMTTLKRLGKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKI 428
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLR 126
+A EL LTGGI+L + + YRGK+Y P + S I R + K K+ + L
Sbjct: 429 MAKELKHLTGGILLS-RDREFFVFYRGKDYL--PAAVSSA-IKKQRNIGMYKLKFGNSLS 484
Query: 127 AVKKYIPK-----LEQELELLRAQAETRSENRSDAAEDVQNTEL 165
A PK E++ + Q +T+ + A E ++ T +
Sbjct: 485 ATVTPNPKDGTIECNSEVKGMNFQKDTKQRMLTKAEEAIKRTSI 528
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 24 KNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIH 83
K V + + GI + ++ +H WK+ + ++V + S ++++ L R TGG+V+
Sbjct: 165 KKKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVV-WR 223
Query: 84 EENTIIMYRGKNYAQP 99
II+YRG +Y P
Sbjct: 224 SGTKIILYRGADYKYP 239
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 8 LTPEEHFYFLKMGRKCKNYV-PVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS-AEEVK 65
L+ +E K K K V +G+ I GV+ + H++KH V VK + V+
Sbjct: 866 LSTKERLLLRKQALKIKQPVLAIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQ 925
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRG 93
E+ +L + TG +++ E + II+YRG
Sbjct: 926 ELVFKLEQETGALLVS-REPSNIILYRG 952
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
+D E +T EE F ++G + K Y+P+G RG++ GVI NMHLHWK + +K+I K +
Sbjct: 615 YDQETITDEERAVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLA 674
Query: 63 EVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
++ A L +GGI++ I + +I YRGKNY +P + PR L++ KAL +S
Sbjct: 675 FAEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPIN--LRPRNLLTKAKALKRS 732
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT E K+ +K + +GR +QG+ + W+K K+ VK K
Sbjct: 409 LTNAEMTNLRKLAKKLPCHFALGRNRNHQGLASTILKVWEKSLVAKIAVKRGIQNTNNKL 468
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
+A EL LTGG++L + + I++YRGK++ PT + +
Sbjct: 469 MADELKMLTGGVLL-LRNKYYIVIYRGKDFL--PTSVAA 504
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 11 EEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE 70
EE +MG + V V + G+ + V+ +H W+K++ +++ A ++K
Sbjct: 213 EELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEI 272
Query: 71 LARLTGGIVLEIHEENTIIMYRGKNYAQPPTE 102
R TGG+V+ + +++YRG +Y PP++
Sbjct: 273 TERRTGGLVI-WRAGSVMVVYRGSSYEGPPSK 303
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
++T EE F ++G + K Y+P+G RG++ GVI NMHLHWK + +K+I K + V+E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 67 IAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
A LA +GGI++ I + +I YRGKNY +P + PR L++ KAL ++
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPIN--IRPRNLLTKAKALKRA 114
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 87/144 (60%), Gaps = 15/144 (10%)
Query: 6 EILTPEEHFYFLKMG-----RKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK--T 58
E ++ EE + F+K+G R + GRRG++ GV+ NMHLHWK + +KVI K
Sbjct: 145 EQISDEERYMFMKLGLRMRARLLMGKLSSGRRGVFDGVVENMHLHWKHRELVKVIFKGPI 204
Query: 59 FSAEEVKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKA 115
F AE+ +I L +GG+++ I + II YRGKNY Q P+E + PR LS+++A
Sbjct: 205 FEAEQTAKI---LEMESGGVLVGIVTTTKGQAIIFYRGKNY-QRPSE-LRPRHLLSKRQA 259
Query: 116 LDKSKYRDGLRAVKKYIPKLEQEL 139
++S R++++++ KLE+E+
Sbjct: 260 YERSLEMQRKRSLEQHMLKLEKEI 283
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRG+++GVI +H HWK + +KVI K A +
Sbjct: 351 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQ 410
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ + L TGG ++ I T II+YRGKNY +P +P L++++AL +S
Sbjct: 411 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKS--APSNLLTKREALQRS 467
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K R + +GR QG+ + W+K KV VK ++
Sbjct: 143 LADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNSNHEQ 202
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L RLTGG V+ + ++ II+YRGK++
Sbjct: 203 MARNLKRLTGGTVI-LRNKDYIIIYRGKDF 231
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
HDPE L+PE + R +++ +G+RG+++G I +++ HW H+TL++ + +
Sbjct: 94 VHDPEYLSPEFMTALKERNRCIDDFLTIGKRGVWEGFIRDIYSHWINHETLRIYCEGYPL 153
Query: 62 EEVKEIAAELARLTGGIVLEIHEEN-TIIMYRGKNYA---QPPTEI 103
+++ +A ++AR++G +V+ + EE + I+YRG+N++ QPP+ I
Sbjct: 154 RKLRPMAEKVARMSGAVVIAVTEETMSFILYRGRNFSHGYQPPSRI 199
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSA 61
+ D E +T EE + ++G K K ++ +GRRG+Y G+I NMHLHWK + +KV+ K
Sbjct: 432 SEDRETITEEERYTLQRVGLKMKAFLLLGRRGVYSGIIENMHLHWKYRELVKVVYKGKDR 491
Query: 62 EEVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 118
++++ A + +GGI++ I+ + + YRGKNY +P E + P L+++KAL +
Sbjct: 492 MDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGKNYRRP--EELRPHNLLTKRKALAR 549
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
K + V + GI + V+ +H W+ + +K+ A ++++ EL + TGG+V+
Sbjct: 48 TKERIKVKKLGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRKVHEELEKRTGGLVI-W 106
Query: 83 HEENTIIMYRGKNYAQPPTEIMSPRITLSRKK 114
+++YRGK+YA PP E P ++S+ K
Sbjct: 107 RAGTALVIYRGKDYAGPPKERWIPTESVSKPK 138
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
L+ +E +++ R+ + R QG+ M W+K + KV +K + + + +
Sbjct: 227 LSDKEFTNLVRLARQMPPQFVISRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAK 286
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPP 100
+A EL RLTG ++L E+ +I YRGK++ P
Sbjct: 287 MADELKRLTGCVLLG-REKTHMIFYRGKDFLPAP 319
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E LT EE F ++GRK V +GRRGI+ GVI +H HWK + +KVI K +
Sbjct: 560 DREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQ 619
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ A+ L TGGI++ + + T II+YRGKNY +P S L++++AL +S
Sbjct: 620 IMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSN--LLTKREALRRS 676
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 352 LADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQ 411
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG V+ + ++ II+YRGK++
Sbjct: 412 MAWNLKHLTGGTVI-LRNKDFIILYRGKDF 440
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E LT EE F ++GRK V +GRRGI+ GVI +H HWK + +KVI K +
Sbjct: 560 DREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQ 619
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ A+ L TGGI++ + + T II+YRGKNY +P S L++++AL +S
Sbjct: 620 IMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSN--LLTKREALRRS 676
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 352 LADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQ 411
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG V+ + ++ II+YRGK++
Sbjct: 412 MAWNLKHLTGGTVI-LRNKDFIILYRGKDF 440
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRG+++GVI +H HWK + +KVI K A +
Sbjct: 562 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQ 621
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ + L TGG ++ I T II+YRGKNY +P +P L++++AL +S
Sbjct: 622 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKS--APSNLLTKREALQRS 678
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K R + +GR QG+ + W+K KV VK ++
Sbjct: 354 LADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQ 413
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L RLTGG V+ + ++ II+YRGK++
Sbjct: 414 MARNLKRLTGGTVI-LRNKDYIIIYRGKDF 442
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRG+++GVI +H HWK + +KVI K A +
Sbjct: 562 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQ 621
Query: 64 VKEIAAELARLTGGIVLEIHEENT---IIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ + L TGG ++ I T II+YRGKNY +P +P L++++AL +S
Sbjct: 622 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKS--APSNLLTKREALQRS 678
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K R + +GR QG+ + W+K KV VK ++
Sbjct: 354 LADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQ 413
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L RLTGG V+ + ++ II+YRGK++
Sbjct: 414 MARNLKRLTGGTVI-LRNKDYIIIYRGKDF 442
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F K+G+K + + +GRRG++ GVI +H HWK + +KVI S +
Sbjct: 332 DKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQ 391
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L +GG+++ I E + II+YRGKNY +P + P+ L++++AL++S
Sbjct: 392 VLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIK--LVPKNLLTKREALNRSL 449
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE--TRSENRSDAAEDVQNTELDKPD 169
+ ++K + + +Q + L+ + + R D E + T+ + PD
Sbjct: 450 EMQRIGSLKFFAYQRQQAISDLKLKLADLQKGSRRIDQRESEKFTKHEPPD 500
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
LT +E Y K+ + +GR QG+ + W+K +K+ +K + ++
Sbjct: 123 LTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQ 182
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG++L + + II+YRGK++
Sbjct: 183 MANELKCLTGGVLL-LRNKFFIILYRGKDF 211
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRGI+ GVI +H HWK + +KVI K A +
Sbjct: 575 DKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQ 634
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ + L TGG+++ ++ + II+YRGKNY +P SP L++++AL +S
Sbjct: 635 ITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKS--SPSNLLTKREALRRS 691
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 366 LADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQ 425
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG ++ + ++ +I+YRGK++
Sbjct: 426 MAWNLKHLTGGTII-LRNKDFVILYRGKDF 454
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F KMG K + + +GRRG++ GVI +H HWK + +KVI + +
Sbjct: 609 DQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQ 668
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L +GGI++ + E II++RGKNY +P + + L+++KAL +S
Sbjct: 669 VNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSV--SKNLLTKRKALSRSL 726
Query: 121 YRDGLRAVKKY-------IPKLEQELELLR 143
+ ++K + I +L+ ELE +R
Sbjct: 727 EMQRIGSLKFFANQRQQKIYELQHELEKVR 756
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 7/173 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F K+G+K + + +GRRG++ GVI +H HWK + +KVI S +
Sbjct: 631 DKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQ 690
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L +GG+++ I E + II+YRGKNY +P + P+ L++++AL++S
Sbjct: 691 VLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIK--LVPKNLLTKREALNRSL 748
Query: 121 YRDGLRAVKKYIPKLEQELELLRAQAE--TRSENRSDAAEDVQNTELDKPDFG 171
+ ++K + + +Q + L+ + + R D E + T+ + PD
Sbjct: 749 EMQRIGSLKFFAYQRQQAISDLKLKLADLQKGSRRIDQRESEKFTKHEPPDVA 801
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
LT +E Y K+ + +GR QG+ + W+K +K+ +K + ++
Sbjct: 422 LTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQ 481
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG++L + + II+YRGK++
Sbjct: 482 MANELKCLTGGVLL-LRNKFFIILYRGKDF 510
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE F KMG K + + +GRRG++ GVI +H HWK + +KVI + +
Sbjct: 609 DQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQ 668
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L +GGI++ + E II++RGKNY +P + + L+++KAL +S
Sbjct: 669 VNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSV--SKNLLTKRKALSRSL 726
Query: 121 YRDGLRAVKKY-------IPKLEQELELLR 143
+ ++K + I +L+ ELE +R
Sbjct: 727 EMQRIGSLKFFANQRQQKIYELQHELENVR 756
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRG++ GVI +H HWK + +KVI K + +
Sbjct: 576 DKELLTEEERMIFRKIGLKMDEHVLLGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQ 635
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
+ + L TGG+++ ++ + II+YRGKNY +P SP L++++AL +S
Sbjct: 636 ITYTSMLLEVETGGVLIATQKLPHSHAIILYRGKNYRRPEK---SPSNLLTKREALRRSV 692
Query: 121 YRDGLRAVKKYIPKLEQELELLR 143
++K Y+ + ++ +E L+
Sbjct: 693 EVQRRGSMKYYVWERQKSIEELQ 715
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 367 LADEELTYLRKLARPLPAHFALGRNTKLQGLAAAILKLWEKSLVAKIAVKVGIENTNNEQ 426
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG ++ + ++ II+YRGK++
Sbjct: 427 MAWNLKHLTGGTII-LRNKDFIILYRGKDF 455
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Query: 27 VPV-GRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEE 85
VP+ GRRG++ G I NMHLHWK + +K++VK S +VK+IA L +GGI++ + +
Sbjct: 4 VPLSGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKV 63
Query: 86 N---TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ I+++RGK+YA+P + PR LS++KAL +S
Sbjct: 64 SKGYAIVVFRGKDYARPSK--LRPRNLLSKRKALARS 98
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E+LT EE F K+G K +V +GRRGI+ GVI +H HWK + +KVI K A +
Sbjct: 575 DKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQ 634
Query: 64 VKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
+ + L TGG+++ ++ + II+YRGKNY +P SP ++++AL +S
Sbjct: 635 ITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKS--SPSNLRTKREALRRS 691
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 366 LADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQ 425
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG ++ + ++ +I+YRGK++
Sbjct: 426 MAWNLKHLTGGTII-LRNKDFVILYRGKDF 454
>gi|224065312|ref|XP_002301769.1| predicted protein [Populus trichocarpa]
gi|222843495|gb|EEE81042.1| predicted protein [Populus trichocarpa]
Length = 117
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 8/121 (6%)
Query: 119 SKYRDGLRAVKKYIPKLEQELELLRAQAETRSENRS-DAAEDVQNTELDKPDFGSIPSMM 177
SK RDGLRAVK+YIP L+Q+LELL+A+AE + NRS AA++ +D+ + ++
Sbjct: 2 SKCRDGLRAVKRYIPALQQDLELLQARAEGKVGNRSTGAAKETPEAGIDE----KLKEII 57
Query: 178 ECSENDP--TTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHE 235
+ E M EDLSDIF T +TET+E E RP YL++FDKF V+ + E E
Sbjct: 58 DRKERKALKIVVVWMTIRFEDLSDIFMTVPDTETDE-IEKRPPYLEEFDKFSVEANGEPE 116
Query: 236 D 236
+
Sbjct: 117 E 117
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 2 THDPEILTPEEHFYFLKMGRKCKNYVPV-GRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+ D E +T EE + ++G K K ++ + GRRG+Y G+I NMHLHWK + +KV+ K
Sbjct: 429 SEDRETITEEERYTLQRVGLKMKAFLLLAGRRGVYSGIIENMHLHWKYRELVKVVYKGKD 488
Query: 61 AEEVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALD 117
++++ A + +GGI++ I+ + + YRGKNY +P E + P L+++KAL
Sbjct: 489 RMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGKNYRRP--EELRPHNLLTKRKALA 546
Query: 118 K 118
+
Sbjct: 547 R 547
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
K + V + GI + V+ +H W+ + +K+ A ++++ EL + TGG+V+
Sbjct: 49 TKERIKVKKLGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRKVHEELEKRTGGLVI-W 107
Query: 83 HEENTIIMYRGKNYAQPPTEIMSPRITLSRKK 114
+++YRGK+YA PP E P ++S+ K
Sbjct: 108 RAGAALVIYRGKDYAGPPKERWIPTESVSKPK 139
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSAEEVKE 66
L+ E +++ R+ + R QG+ M W+K + KV +K + + + +
Sbjct: 228 LSDREFTNLVRLARQMPPQFVISRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAK 287
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPP 100
+A EL RLTG ++L E+ +I YRGK++ P
Sbjct: 288 MADELKRLTGCVLLG-REKTHMIFYRGKDFLPAP 320
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D EILT EE ++G K + + +GRRG++ GV+ +H HWK + KVI
Sbjct: 568 DIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSR 627
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L + G+++ I E + I++YRGKNY +P +++M+ + L+++KAL +S
Sbjct: 628 VVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNL-LTKRKALQRSV 686
Query: 121 YRDGLRAVKKYIPKLEQELELLRA 144
L ++K + + E+ +E L+
Sbjct: 687 VMQRLGSLKFFAYQRERAIEDLKV 710
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE-EVKE 66
LT EE Y + + + +GR QG+ + W+K K+ +K + +E
Sbjct: 361 LTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEE 420
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG+++ + + I++YRGK++
Sbjct: 421 MADELRYLTGGVLI-LRNKYLIVLYRGKDF 449
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D EILT EE ++G K + + +GRRG++ GV+ +H HWK + KVI
Sbjct: 566 DIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSR 625
Query: 64 VKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L + G+++ I E + I++YRGKNY +P +++M+ + L+++KAL +S
Sbjct: 626 VVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNL-LTKRKALQRSV 684
Query: 121 YRDGLRAVKKYIPKLEQELELLRA 144
L ++K + + E+ +E L+
Sbjct: 685 VMQRLGSLKFFAYQRERAIEDLKV 708
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE-EVKE 66
LT EE Y + + + +GR QG+ + W+K K+ +K + +E
Sbjct: 359 LTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEE 418
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG+++ + + I++YRGK++
Sbjct: 419 MADELRYLTGGVLI-LRNKYLIVLYRGKDF 447
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D EI+T EE F K+G K ++ + +GRRGI+ GV+ +H HWK + +KVI +
Sbjct: 553 DLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQ 612
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSK 120
V A L +GGI++ + E + II+YRGKNY +P ++ + L++++AL +S
Sbjct: 613 VINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKRPSIKL--AKNLLTKREALRRSL 670
Query: 121 YRDGLRAVKKYIPKLEQ---ELELLRAQAETRSE 151
+ ++K + + EQ ELE+ A + + E
Sbjct: 671 EMQRIGSMKFFAHQREQAISELEVKLADLQQKKE 704
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE 62
H LT E YF K+ + + +GR +G+ + W+K K+ +K
Sbjct: 339 HSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPN 398
Query: 63 EVKEIAA-ELARLTGGIVLEIHEENTIIMYRGKNY 96
E+ A EL LTGG++L + + I++YRG ++
Sbjct: 399 TDNEMMANELKCLTGGVLL-LRNKFYILLYRGNDF 432
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E++T EE K+G K ++ + +GRRG++ GVI +H HWK + +KVI +
Sbjct: 590 DLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQ 649
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V A L TGGI++ I E + II+YRGKNY +P + + L+++KAL +S
Sbjct: 650 VIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQRLLNN---LLTKRKALCRS 705
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L +E Y K+ + +GR QG+ + W++ K+ VK + ++
Sbjct: 381 LKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQ 440
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG++L + + II++RGK++
Sbjct: 441 MANELKHLTGGVLL-LRNKFFIILFRGKDF 469
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-- 58
M E +T EE + K+G + K Y+ +GRR ++ GVI NMHLHWK Q +K+IVK
Sbjct: 338 MHASKEDVTEEEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSY 397
Query: 59 FSAEE---VKEIAAELARLTGGIVLEIHE---ENTIIMYRGKNYAQPPTEIMSP 106
F E ++ IA L +GG+++ I II+YRGKNY Q P + +SP
Sbjct: 398 FMYRERDDIENIARMLEIESGGVLVGICTIPVGEAIIVYRGKNY-QRPNDGISP 450
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVG------------RRGIYQGVILNMHLHWKKHQT 51
D EI+T EE F KMG K ++ + +G RRG++ GV+ +H HWK +
Sbjct: 660 DLEIMTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRGVFDGVLEGLHQHWKHREV 719
Query: 52 LKVIVKTFSAEEVKEIAAELARLTGGIVL---EIHEENTIIMYRGKNYAQPPTEIMSPRI 108
KVI V + L R +GGI++ ++ E II+YRGKNY++P +I +
Sbjct: 720 AKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYSRPSEKI--AKN 777
Query: 109 TLSRKKALDKS 119
L+++KAL +S
Sbjct: 778 LLTKRKALRRS 788
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVK-TFSA 61
H LT E YF ++ + +GR QG+ + W K K+ +K
Sbjct: 444 HASAKLTDGELTYFRRISHPLPTHFVLGRNRGLQGLAAAILKLWHKSHIAKIAIKYGVQN 503
Query: 62 EEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ + +A EL RLTGG++L + + I++YRGK++
Sbjct: 504 TDNETMANELKRLTGGVLL-LRNKFYILLYRGKDF 537
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 14/103 (13%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D E +T EE + F K+G + ++ +GRRG++ GVI NMHLHWK + +K+I+K E+
Sbjct: 598 DRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILK----EK 653
Query: 64 VKEIAAELARL----TGGIV----LEIHEENT--IIMYRGKNY 96
K IA E+A++ +GGI+ L++H E +IM K+Y
Sbjct: 654 DKAIALEVAKMLEIESGGILVGVALQLHIEKLEELIMKLRKDY 696
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAE-LARLTGGIVLEIHEENT 87
+GR QG+ + W+K + +K+ +K ++ AE L RLTGG++L ++
Sbjct: 414 LGRNRGLQGLASAILKLWQKSELVKIGLKRGVQNTRNQLMAEELERLTGGVLLS-RDKFF 472
Query: 88 IIMYRGKNYAQPPTEIMS 105
I +YRGK++ PT + +
Sbjct: 473 ITLYRGKDFL--PTSVAA 488
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 4 DPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
D I+T EE F K+G K + + +GRRG+++GV+ +H HWK + +KVI +
Sbjct: 524 DQGIMTEEERECFRKIGLKLRGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQ 583
Query: 64 VKEIAAELARLTGGIVLEI---HEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
V A L + GI++ + E + II+YRGKNY +P + + L++++AL +S
Sbjct: 584 VIHTATLLEAESDGILVSVDKLKEGHAIIIYRGKNYKRPLR--LLKKNLLTKREALKRS 640
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E +T EE F +G + K Y+ + G++ VI NMHLHW++ + +K+I K S V+
Sbjct: 523 ETITDEERVMFRVVGLRLKVYLQLDTLGVFDSVIENMHLHWRQRELVKLITKQKSLAFVE 582
Query: 66 EIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKS 119
E A+ L +GGI++ I + ++I YRGK+Y +P T + R L++ KAL S
Sbjct: 583 ETASLLEYKSGGILVAIDRLPKGFSLIYYRGKDYKRPIT--LRHRNLLTKTKALQHS 637
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT +EH LK+ + + +GR QG+ + W+K K+ VK E+
Sbjct: 322 LTNDEHTKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSLVAKIAVKLGVQNTNNEL 381
Query: 68 AA-ELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMS 105
A EL +LTGG +L + + I++YRGK++ PT + +
Sbjct: 382 MALELKKLTGGTLL-LRNKYYILIYRGKDFI--PTSVAA 417
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 30 GRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI---HEEN 86
GRRG++ GVI +H HWK + +KVI S +V A L +GG+++ I E +
Sbjct: 119 GRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGH 178
Query: 87 TIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRDGLRAVKKYIPKLEQELELLRAQA 146
II+YRGKNY +P + P+ L++++AL++S + ++K + + +Q + L+ +
Sbjct: 179 AIIIYRGKNYRRPIK--LVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKL 236
Query: 147 E--TRSENRSDAAEDVQNTELDKPD 169
+ R D E + T + PD
Sbjct: 237 ADLQKGSRRIDQRESEKFTXHEPPD 261
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPV-----GRRGIYQGVILNMHLHWKKHQTLKVIV- 56
H +L P Y L M N++ V GRRG++ G++ +H HWK + KVI
Sbjct: 573 HSCLLLIP----YPLAMRLIYINFIFVFVSFLGRRGVFVGIMEGLHQHWKHREVAKVITM 628
Query: 57 -KTFSAEEVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYAQPPTEIMSPRITLSR 112
K FS V A L + G+++ I E + I++YRGKNY +P +++M+ + L++
Sbjct: 629 QKIFS--RVVYTAKSLEAESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNL-LTK 685
Query: 113 KKALDKSKYRDGLRAVKKYIPKLEQELELLR 143
+KAL +S L ++K + + E+ +E L+
Sbjct: 686 RKALQRSVAMQRLGSLKFFAYQRERVIEDLK 716
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAE-EVKE 66
L+ EE Y + + + +GR QG+ + W+K K+ +K + +E
Sbjct: 334 LSDEELTYLRNIAQALPFHFVLGRNHGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEE 393
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A EL LTGG+++ + + II+YRGK++
Sbjct: 394 MADELKHLTGGVLI-LRNKYLIILYRGKDF 422
>gi|302754228|ref|XP_002960538.1| hypothetical protein SELMODRAFT_402884 [Selaginella moellendorffii]
gi|300171477|gb|EFJ38077.1| hypothetical protein SELMODRAFT_402884 [Selaginella moellendorffii]
Length = 961
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 11/75 (14%)
Query: 60 SAEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRI-TLSRK----- 113
S EE + I AELARL+GGIVL++ E+ T+IM+RGKNY Q P E+ P + + R+
Sbjct: 161 SMEETRRIGAELARLSGGIVLDVLEDRTVIMFRGKNY-QTPEELYPPTLEAVDRRNADSR 219
Query: 114 ----KALDKSKYRDG 124
+ALD YR G
Sbjct: 220 HHIQRALDSQVYRLG 234
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE F +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 183 EPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
I +L GG V IH + +I ++RG+NY
Sbjct: 243 NICQQLEEKVGGKV--IHRQGGVIFLFRGRNY 272
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+T P LTP+E GR+ +G+ G+Y ++ + ++ ++V +
Sbjct: 296 VTKVPGGLTPDEATEMRARGRQLPPICKLGKNGVYANLVKQVREAFEACDLVRVDCSGLN 355
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
+ ++I A+L L I+L E+ I+M+RG ++ + PP E
Sbjct: 356 KSDCRKIGAKLKDLVPCILLSFEFEH-ILMWRGSDWKSSLPPLE 398
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L GG V+ H+ I ++RG+NY
Sbjct: 243 NVCQQLEEKVGGKVIH-HQGGVIFLFRGRNY 272
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ LTP+E K GR+ +G+ G+Y ++ + ++ ++V + +
Sbjct: 300 PDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDC 359
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
++I A+L L +L E+ I+M+RG ++ + PP E
Sbjct: 360 RKIGAKLKDLVPCTLLSFEFEH-ILMWRGNDWKSSLPPLE 398
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L GG V+ H+ I ++RG+NY
Sbjct: 243 NVCQQLEEKVGGKVIH-HQGGVIFLFRGRNY 272
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ LTP+E K GR+ +G+ G+Y ++ + ++ ++V + +
Sbjct: 300 PDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDC 359
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
++I A+L L +L E+ I+M+RG ++ + PP E
Sbjct: 360 RKIGAKLKDLVPCTLLSFEFEH-ILMWRGNDWKSSLPPLE 398
>gi|154986385|gb|ABS89146.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 668
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 127 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 186
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 187 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYTYP 220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 417 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 476
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
E I E+ LTGG +L +E +I+ YRGK++ P + + +++ L S
Sbjct: 477 SELITEEVKELTGGTLLSRDKE-SIVFYRGKDFLPPAVS-----LAIEKRRKLGSSTIYK 530
Query: 124 GLRAVKKYIP-------KLEQELEL-LRAQAETRSENRSDAAEDV 160
+++ +P K+ ++ + +R + + +ENR+++ V
Sbjct: 531 AKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTV 575
>gi|413918578|gb|AFW58510.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 681
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 6 EILTPEEHFYFLK-MGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
E+ P + L+ +G + + + VG+ GI +G++ +H W+ + +K+ + A +
Sbjct: 140 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 199
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQP 99
+ L R TGG+V+ +TII+YRG NY P
Sbjct: 200 RRTHEILERKTGGLVI-WRSGSTIILYRGTNYTYP 233
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT E ++ + +GR QG+ +M W++ + K+ +K +
Sbjct: 430 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 489
Query: 65 KE-IAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDKSKYRD 123
E I E+ LTGG +L +E +I+ YRGK++ P + + +++ L S
Sbjct: 490 SELITEEVKELTGGTLLSRDKE-SIVFYRGKDFLPPAVS-----LAIEKRRKLGSSTIYK 543
Query: 124 GLRAVKKYIP-------KLEQELEL-LRAQAETRSENRSDAAEDV 160
+++ +P K+ ++ + +R + + +ENR+++ V
Sbjct: 544 AKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTV 588
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E L+ EE +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 181 EPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMD 240
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ +L GG V IH + ++ ++RG+NY
Sbjct: 241 NVCQQLEERVGGKV--IHRQGGVVFLFRGRNY 270
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P+ LT +E K GR+ +G+ G+Y ++ + ++ ++V + +
Sbjct: 298 PDGLTSDEATEMRKKGRQLTPVCKLGKNGVYANLVNEVREAFEACDLVRVDCSGLNKSDC 357
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
++I A+L L I+L E+ I+M+RG ++ + PP+E
Sbjct: 358 RKIGAKLKDLVPCILLSFEFEH-ILMWRGNDWRSSLPPSE 396
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 242
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
I +L GG V IH + +I ++RG+NY
Sbjct: 243 NICHQLEEKVGGKV--IHRQGGVIFLFRGRNY 272
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+T P LTP+E G + +G+ G+Y ++ + ++ ++V +
Sbjct: 296 VTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLN 355
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
+ ++I A+L L I+L E+ I+M+RG ++ + PP E
Sbjct: 356 KSDCRKIGAKLKDLVPCILLSFEFEH-ILMWRGSDWKSSLPPLE 398
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE +K K + + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 199 EPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMD 258
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ +L TGG + IH + ++ ++RG+NY
Sbjct: 259 NVCHQLEERTGGKI--IHRKGGVLYLFRGRNY 288
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE +K K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 69 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 128
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
I +L GG V IH + +I ++RG+NY
Sbjct: 129 NICHQLEEKVGGKV--IHRQGGVIFLFRGRNY 158
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+T P LTP+E G + +G+ G+Y ++ + ++ ++V +
Sbjct: 182 VTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLN 241
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
+ ++I A+L L I+L E+ I+M+RG ++ + PP E
Sbjct: 242 KSDCRKIGAKLKDLVPCILLSFEFEH-ILMWRGSDWKSSLPPLE 284
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 6 EILTPEEHFYFL-KMGR-KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
E LTP E + + K R + K V +GR G+ ++ ++H HWK + ++V +
Sbjct: 156 EPLTPAERTFVVDKCQRNRTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVD 215
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ + EL TGG+++ H +I+YRG++Y
Sbjct: 216 MQNVCHELEDKTGGLIIHRH-GGQLILYRGRHY 247
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 6 EILTPEEHFYFLKMGRK--CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
E LTP E + ++ +K K + +GR G+ ++ ++H HWK + ++V +
Sbjct: 161 EPLTPAERSFLVEKCQKNRTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVD 220
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ + EL TGG+++ H +I+YRG++Y
Sbjct: 221 MQNVCHELEDKTGGLIIHRH-GGQLILYRGRHY 252
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 EILTPEEHFYFLKMGRK--CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
E LTP E + + +K K + +GR G+ ++ ++H HWK + ++V +
Sbjct: 155 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 214
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ + +L TGG+++ H +I+YRG++Y
Sbjct: 215 MQNVCHQLEDKTGGLIIHRH-GGQLILYRGRHY 246
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG V+ + + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT EE K GRK + + G+Y ++ N+ +++ + +++ + +A +
Sbjct: 359 PEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDY 418
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++I A+L L +++ E+ I+M+RG ++
Sbjct: 419 RKIGAKLKDLVPCVLISFEHEH-ILMWRGSDW 449
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT +E +K K + +GR G+ ++ N+H +W + K+ + ++
Sbjct: 237 EPLTKDEINRLIKATEKSSRQLNIGRDGLTHNMLENIHTYWMRRSACKIKCRGVCTVDMD 296
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG ++ + T+ ++RGKNY
Sbjct: 297 NVCQQLEERTGGKII-YRQAGTVYLFRGKNY 326
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG V+ + + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT EE K GRK + + G+Y ++ N+ +++ + +++ + +A +
Sbjct: 359 PEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDY 418
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++I A+L L +++ E+ I+M+RG ++
Sbjct: 419 RKIGAKLKDLVPCVLISFEHEH-ILMWRGSDW 449
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 6 EILTPEEHFYFLKMGRK--CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
E LTP E + + +K K + +GR G+ ++ ++H HWK + ++V +
Sbjct: 131 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 190
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ + +L TGG+++ H +I+YRG++Y
Sbjct: 191 MQNVCHQLEDKTGGLIIHRH-GGQLILYRGRHY 222
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 30 GRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTII 89
GR G+ ++ ++H HWK + ++V +++ + +L TGG+++ H +I
Sbjct: 368 GRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRH-GGQLI 426
Query: 90 MYRGKNY 96
+YRG++Y
Sbjct: 427 LYRGRHY 433
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ K + + +GR G+ ++ N+H HWK+ + K+ ++
Sbjct: 250 EPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMD 309
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG V+ + + ++RG+NY
Sbjct: 310 NVCQQLEERTGGKVI-YRKGGVVYLFRGRNY 339
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K + +GR G+ ++ N+H HWK+ + K+ K ++ + +L TGG ++
Sbjct: 262 KAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKII- 320
Query: 82 IHEENTIIMYRGKNY 96
+ + ++RG+NY
Sbjct: 321 YRKGGVLYLFRGRNY 335
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT +E GRK +G+ G+Y+ ++ N+ +++ + +++ + + +
Sbjct: 363 PEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDF 422
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++I A+L L +++ E+ I+M+RG+++
Sbjct: 423 RKIGAKLRDLVPCVLISFECEH-ILMWRGRDW 453
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LTP E +K + +GR G+ ++ +H HW++ + KV + ++K
Sbjct: 231 EPLTPAEVRALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 290
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ L +GG V IH ++ +YRG+NY
Sbjct: 291 NLCYHLEEKSGGKV--IHRVGGVVFLYRGRNY 320
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 6 EILTPEEHFYFLKMGRK--CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEE 63
E LTP E + + +K K + +GR G+ ++ ++H +WK + +++ +
Sbjct: 162 EPLTPAERAFLVDKCQKNRTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVD 221
Query: 64 VKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ + +L TGG+++ H + +I+YRG++Y
Sbjct: 222 MQNVCHQLEDKTGGVIIHRH-GSLLILYRGRHY 253
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ K + +GR G ++ N+H HWK+ + K+ ++
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMD 229
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG V+ I ++RG+NY
Sbjct: 230 NVCQQLEEKTGGKVI-YRRGGVIYLFRGRNY 259
>gi|147799432|emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
Length = 393
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ K K + +GR G+ ++ N+H HWK+ + K+ K ++
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG V+ + + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
>gi|413921149|gb|AFW61081.1| hypothetical protein ZEAMMB73_173916 [Zea mays]
Length = 291
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 158 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS- 216
Query: 83 HEENTIIMYRGKNY 96
N II+YRG+NY
Sbjct: 217 RSINIIILYRGRNY 230
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 158 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS- 216
Query: 83 HEENTIIMYRGKNY 96
N II+YRG+NY
Sbjct: 217 RSINIIILYRGRNY 230
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ +I ++H HWKK + +++ ++ I L +GG ++
Sbjct: 156 CSRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYR 215
Query: 83 HEENTIIMYRGKNY 96
H N +++YRG+NY
Sbjct: 216 H-INILVLYRGRNY 228
>gi|218200589|gb|EEC83016.1| hypothetical protein OsI_28075 [Oryza sativa Indica Group]
Length = 365
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ +I ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 161 CSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-Y 219
Query: 83 HEENTIIMYRGKNY 96
N +I+YRG+NY
Sbjct: 220 RNINILILYRGRNY 233
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ +I ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 157 CSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-Y 215
Query: 83 HEENTIIMYRGKNY 96
N +I+YRG+NY
Sbjct: 216 RNINILILYRGRNY 229
>gi|143955290|sp|Q0J7J7.2|CAF2M_ORYSJ RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|222640037|gb|EEE68169.1| hypothetical protein OsJ_26288 [Oryza sativa Japonica Group]
Length = 366
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ +I ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 162 CSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-Y 220
Query: 83 HEENTIIMYRGKNY 96
N +I+YRG+NY
Sbjct: 221 RNINILILYRGRNY 234
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 158 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS- 216
Query: 83 HEENTIIMYRGKNY 96
N II+YRG+NY
Sbjct: 217 RSINIIILYRGRNY 230
>gi|222618317|gb|EEE54449.1| hypothetical protein OsJ_01538 [Oryza sativa Japonica Group]
Length = 587
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G+ ++ +H HW++ + KV + ++K + L +GG V IH +
Sbjct: 231 IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKV--IHRVGGV 288
Query: 89 I-MYRGKNY 96
+ +YRG+NY
Sbjct: 289 VFLYRGRNY 297
>gi|194697426|gb|ACF82797.1| unknown [Zea mays]
Length = 611
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LTP E +K + +GR G+ ++ +H HW++ + KV + ++K
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 291
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ L +GG V IH ++ +YRG++Y
Sbjct: 292 NLCYHLEEKSGGKV--IHRVGGVVFLYRGRHY 321
>gi|162464008|ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea mays]
gi|414877310|tpg|DAA54441.1| TPA: crs2 associated factor2 [Zea mays]
Length = 611
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LTP E +K + +GR G+ ++ +H HW++ + KV + ++K
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 291
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ L +GG V IH ++ +YRG++Y
Sbjct: 292 NLCYHLEEKSGGKV--IHRVGGVVFLYRGRHY 321
>gi|110742047|dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
Length = 717
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE- 66
L P+E ++ R + +GR QG+ M W+K K+ +K E
Sbjct: 423 LGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSER 482
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A +L +LTGGI+L ++ ++ YRGKN+
Sbjct: 483 MAEDLKKLTGGIMLS-RNKDFLVFYRGKNF 511
>gi|125525663|gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
Length = 609
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G+ ++ +H HW++ + KV + ++K + L +GG V IH +
Sbjct: 253 IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKV--IHRVGGV 310
Query: 89 I-MYRGKNY 96
+ +YRG+NY
Sbjct: 311 VFLYRGRNY 319
>gi|115436276|ref|NP_001042896.1| Os01g0323300 [Oryza sativa Japonica Group]
gi|75115027|sp|Q657G7.1|CAF2P_ORYSJ RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|52075771|dbj|BAD44991.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|52076260|dbj|BAD45045.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|113532427|dbj|BAF04810.1| Os01g0323300 [Oryza sativa Japonica Group]
Length = 607
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G+ ++ +H HW++ + KV + ++K + L +GG V IH +
Sbjct: 251 IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKV--IHRVGGV 308
Query: 89 I-MYRGKNY 96
+ +YRG+NY
Sbjct: 309 VFLYRGRNY 317
>gi|357144748|ref|XP_003573400.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like
[Brachypodium distachyon]
Length = 365
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ + ++ I L TGG + I
Sbjct: 161 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVATLDMDNICFHLEDKTGGKI--I 218
Query: 83 HEE-NTIIMYRGKNY 96
H N +I+YRG+NY
Sbjct: 219 HRSINILILYRGRNY 233
>gi|302763677|ref|XP_002965260.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
gi|302809791|ref|XP_002986588.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300145771|gb|EFJ12445.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300167493|gb|EFJ34098.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
Length = 366
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LTP+E + K V +G+ G+ ++ +H HWK+ + +K+ K ++
Sbjct: 92 EPLTPDEIGDLVLACNKEHRQVNIGKDGLTHNMLDLIHCHWKRRRVIKLRCKGVPTIDMD 151
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ + TGG +++ H +I ++RG+NY
Sbjct: 152 NVCFHIEDKTGGKIIQRH-GGSIYLFRGRNY 181
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P L+ E Y + GR+ K + R G+Y ++ + ++ + +K+ + + +V
Sbjct: 209 PAGLSVEHADYLRRRGRRVKPLTKLSRNGVYLHLVNEVKSAFEVDELVKLDCRGMNIADV 268
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
++I A+L L GIVL E+N ++M+RG
Sbjct: 269 RKIGAKLKELL-GIVLLSFEDNCVLMWRG 296
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K + +GR G+ ++ ++H HWK + +++ ++K + ++L T G ++
Sbjct: 178 KTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIH 237
Query: 82 IHEENTIIMYRGKNY 96
H ++++YRG+NY
Sbjct: 238 RH-CGSLVLYRGRNY 251
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ I L TGG V+
Sbjct: 162 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-Y 220
Query: 83 HEENTIIMYRGKNY 96
N II+YRG+NY
Sbjct: 221 RSINIIILYRGRNY 234
>gi|242052829|ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LTP E +K + +GR G+ ++ +H HW++ + KV + ++K
Sbjct: 234 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 293
Query: 66 EIAAELARLTGGIVLEIHEENTII-MYRGKNY 96
+ L +GG V IH ++ +YRG++Y
Sbjct: 294 NLCYHLEEKSGGKV--IHRVGGVVFVYRGRHY 323
>gi|226508160|ref|NP_001140244.1| uncharacterized protein LOC100272285 [Zea mays]
gi|194698680|gb|ACF83424.1| unknown [Zea mays]
gi|413917198|gb|AFW57130.1| hypothetical protein ZEAMMB73_054545 [Zea mays]
Length = 424
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 8 LTPEEHFYFLKMGRK--CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
LTP E + + +K K + +GR G ++ ++H +WK + +++ +++
Sbjct: 165 LTPAERAFLVDRCQKNRTKRQINLGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDMQ 224
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG+++ H + +I+YRG++Y
Sbjct: 225 NVCHQLEDKTGGLIIHRH-GSLLILYRGRHY 254
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE ++ + +GR G+ ++ N+H WK+ + K+ K ++
Sbjct: 250 EPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMD 309
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L TGG ++ + +YRG+NY
Sbjct: 310 NVKQQLEERTGGKII-YSRGGALYLYRGRNY 339
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+ H P+ LT EE K GRK +G+ G+Y ++ ++ +++ + +++ + +
Sbjct: 363 VKHIPDGLTLEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLN 422
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ ++I A+L L +++ E+ I+++RG+++
Sbjct: 423 GSDFRKIGAKLKDLVPCVLISFESEH-ILLWRGRDW 457
>gi|297603821|ref|NP_001054631.2| Os05g0145300 [Oryza sativa Japonica Group]
gi|255676015|dbj|BAF16545.2| Os05g0145300, partial [Oryza sativa Japonica Group]
Length = 92
Score = 44.3 bits (103), Expect = 0.055, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 3 HDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTF 59
HDPE+LT E+ + K+G + +NYVPVG RG++ GV+ NMH+HWK H+T++V F
Sbjct: 35 HDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNF 91
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ +I ++H HWKK + +++ ++ I L +GG ++
Sbjct: 160 CTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIV-Y 218
Query: 83 HEENTIIMYRGKNY 96
N +++YRG+NY
Sbjct: 219 RNINILVLYRGRNY 232
>gi|255563935|ref|XP_002522967.1| conserved hypothetical protein [Ricinus communis]
gi|223537779|gb|EEF39397.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWKK + +++ ++ + L +GG ++
Sbjct: 202 CSRQINLGKGGVTHNMLDDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIYR 261
Query: 83 HEENTIIMYRGKNY 96
H N +++YRG+NY
Sbjct: 262 H-INILLLYRGRNY 274
>gi|449468496|ref|XP_004151957.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
gi|449489970|ref|XP_004158472.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
Length = 358
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ I L +GG ++
Sbjct: 161 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYR 220
Query: 83 HEENTIIMYRGKNY 96
H N +++YRG+NY
Sbjct: 221 H-INILLLYRGRNY 233
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K + +GR G+ ++ ++H HWK + +++ ++K + +L T G ++
Sbjct: 173 KTKKQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIH 232
Query: 82 IHEENTIIMYRGKNY 96
H +++YRG+NY
Sbjct: 233 RH-CGLLVLYRGRNY 246
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G+ ++ +H HW++ + KV + ++ + L +GG V++ +
Sbjct: 253 IGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMNNLCYHLEEKSGGKVIK-RVGGVV 311
Query: 89 IMYRGKNY 96
+YRG+NY
Sbjct: 312 FLYRGRNY 319
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K V +GR G+ ++ +++ HWK + ++V ++K + L T G V+
Sbjct: 175 KTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS 234
Query: 82 IHEENTIIMYRGKNY 96
H T+++YRG+NY
Sbjct: 235 KH-SGTLVLYRGRNY 248
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
+ K + +GR G+ ++ ++H HWK + +++ ++K + +L T G V+
Sbjct: 180 RTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIH 239
Query: 82 IHEENTIIMYRGKNY 96
+ +++YRG+NY
Sbjct: 240 -RQGGLLVLYRGRNY 253
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWKK + +++ ++ + L +GG V+
Sbjct: 159 CARQINLGKGGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVI-Y 217
Query: 83 HEENTIIMYRGKNY 96
N +++YRG+NY
Sbjct: 218 RNINILLLYRGRNY 231
>gi|326492864|dbj|BAJ90288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 630
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT-FSAEEVKE 66
L EE Y K+ R + +GR QG+ + W+K K+ VK ++
Sbjct: 366 LADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQ 425
Query: 67 IAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+A L LTGG ++ + ++ +I+YRGK++
Sbjct: 426 MAWNLKHLTGGTII-LRNKDFVILYRGKDF 454
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWKK + +++ ++ + L +GG V+
Sbjct: 159 CARQINLGKGGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVI-Y 217
Query: 83 HEENTIIMYRGKNY 96
N +++YRG+NY
Sbjct: 218 RNINILLLYRGRNY 231
>gi|14596153|gb|AAK68804.1| Unknown protein [Arabidopsis thaliana]
Length = 284
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K V +GR G+ ++ +++ HWK + ++V ++K + L T G V+
Sbjct: 175 KTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS 234
Query: 82 IHEENTIIMYRGKNY 96
H T+++YRG+NY
Sbjct: 235 KH-SGTLVLYRGRNY 248
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 8 LTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEI 67
LT E + RK + +GR G+ ++ +H HWK+ + KV K ++ +
Sbjct: 91 LTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDNV 150
Query: 68 AAELARLTGGIVLEIHEENTIIMYRGKNY 96
L TGG ++ + + + ++RG+NY
Sbjct: 151 CRVLEEKTGGKII-LRQGGAVYLFRGRNY 178
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
P LT EE K+GR+ +G+ G+Y ++ ++ +K +KV K + +
Sbjct: 206 PAGLTIEEANNLRKLGRELPPVCHLGKNGVYVNLVRDVRNAFKVDDLVKVDCKNMNPSDY 265
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
K+I A+L L ++L E +I+M+RG
Sbjct: 266 KKIGAKLKDLVPCVLLSFERE-SILMWRG 293
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K +V +GR G+ ++ +H HWK + +++ ++ I +L T G V+
Sbjct: 175 KTNRHVNLGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIF 234
Query: 82 IHEENTIIMYRGKNY 96
H T+I+YRG+NY
Sbjct: 235 RH-GGTLILYRGRNY 248
>gi|297737420|emb|CBI26621.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ +++ + L GG ++
Sbjct: 146 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKII-Y 204
Query: 83 HEENTIIMYRGKNY 96
N I++YRG+NY
Sbjct: 205 RNINIILLYRGRNY 218
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K V +GR G+ ++ +++ HWK + ++V ++K + L T G V+
Sbjct: 176 KTKRQVNLGRDGLTHNMLNDIYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS 235
Query: 82 IHEENTIIMYRGKNY 96
H T+++YRG+NY
Sbjct: 236 KH-CGTLVLYRGRNY 249
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ ++ + L +GG V+
Sbjct: 156 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVV-Y 214
Query: 83 HEENTIIMYRGKNY 96
N +++YRG+NY
Sbjct: 215 RNINILLLYRGRNY 228
>gi|225461009|ref|XP_002278505.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Vitis
vinifera]
Length = 452
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
C + +G+ G+ ++ ++H HWK+ + +++ +++ + L GG ++
Sbjct: 165 CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKII-Y 223
Query: 83 HEENTIIMYRGKNY 96
N I++YRG+NY
Sbjct: 224 RNINIILLYRGRNY 237
>gi|359473240|ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ + L TGG + IH
Sbjct: 215 VNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKI--IHRVG 272
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 273 GVVYLFRGRNY 283
>gi|297836246|ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
gi|297331845|gb|EFH62264.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
Length = 700
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE + K + +GR G+ ++ N+H WK+ + K+ K ++
Sbjct: 241 EPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMD 300
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++ +L GG V+ + ++RG+NY
Sbjct: 301 KVCEQLEEKIGGKVI-YRRGGVLFLFRGRNY 330
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT +E + GR+ +G+ G+Y ++ N+ ++ + +++ + +
Sbjct: 358 PEGLTLQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDF 417
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++I A+L L +++ E I+++RG+ +
Sbjct: 418 RKIGAKLKDLVPCVLISFENEQ-ILIWRGREW 448
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K V +GR G+ ++ +++ HWK + ++V ++K + L T G V+
Sbjct: 175 KTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS 234
Query: 82 IHEENTIIMYRGKNY 96
H T+++YRG+NY
Sbjct: 235 KH-SGTLVLYRGRNY 248
>gi|42573097|ref|NP_974645.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|332660445|gb|AEE85845.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 341
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K V +GR G+ ++ +++ HWK + ++V ++K + L T G V+
Sbjct: 175 KTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS 234
Query: 82 IHEENTIIMYRGKNY 96
H T+++YRG+NY
Sbjct: 235 KH-SGTLVLYRGRNY 248
>gi|297739073|emb|CBI28562.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ + L TGG + IH
Sbjct: 82 VNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKI--IHRVG 139
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 140 GVVYLFRGRNY 150
>gi|224130086|ref|XP_002320749.1| predicted protein [Populus trichocarpa]
gi|222861522|gb|EEE99064.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K + +G G+ ++ ++H HWK + ++V ++K + +L T G ++
Sbjct: 173 KTKKQINLGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDMKNVCTQLEDKTFGKIIH 232
Query: 82 IHEENTIIMYRGKNY 96
H +++YRG+NY
Sbjct: 233 RH-CGLLVLYRGRNY 246
>gi|307135966|gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ I + TGG + IH
Sbjct: 261 VNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKI--IHRVG 318
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 319 GVLYLFRGRNY 329
>gi|449478585|ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ I + TGG + IH
Sbjct: 261 VNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKI--IHRVG 318
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 319 GVLYLFRGRNY 329
>gi|18399222|ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis thaliana]
gi|20197570|gb|AAD24394.2| expressed protein [Arabidopsis thaliana]
gi|28393847|gb|AAO42331.1| unknown protein [Arabidopsis thaliana]
gi|330251862|gb|AEC06956.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 701
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 6 EILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVK 65
E LT EE + K + +GR G+ ++ N+H WK+ + K+ K ++
Sbjct: 241 EPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMD 300
Query: 66 EIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
+ +L GG V+ + ++RG+NY
Sbjct: 301 NVCEQLEEKIGGKVI-YRRGGVLFLFRGRNY 330
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT +E + GR+ +G+ G+Y ++ N+ ++ + +++ + +
Sbjct: 358 PEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDF 417
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRGKNY 96
++I A+L L +++ E I+++RG+ +
Sbjct: 418 RKIGAKLKDLVPCVLVSFENEQ-ILIWRGREW 448
>gi|449434945|ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ I + TGG + IH
Sbjct: 260 VNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKI--IHRVG 317
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 318 GVLYLFRGRNY 328
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 22 KCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLE 81
K K + +GR G+ ++ ++H HW+ + +++ ++K + +L T G ++
Sbjct: 169 KTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIH 228
Query: 82 IHEENTIIMYRGKNY 96
H +++YRG+NY
Sbjct: 229 RH-GGFLVLYRGRNY 242
>gi|22329751|ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4 [Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27 [Arabidopsis thaliana]
gi|17065312|gb|AAL32810.1| Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 564
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G ++ +H HWK+ + KV K ++ + L TGG + IH
Sbjct: 222 VNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEI--IHRVG 279
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 280 GVVYLFRGRNY 290
>gi|225425575|ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +GR G+ ++ +H HWK+ + KV K ++ + L TGG + IH
Sbjct: 215 VNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKI--IHRVG 272
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 273 GVVYLFRGRNY 283
>gi|297850808|ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
gi|297339127|gb|EFH69544.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G ++ +H HWK+ + KV K ++ + L TGG + IH +
Sbjct: 226 LGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEI--IHRVGGV 283
Query: 89 I-MYRGKNY 96
+ ++RG+NY
Sbjct: 284 VYLFRGRNY 292
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 29 VGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEENTI 88
+GR G ++ ++H +WK+ Q +++ K ++ + L TGG ++ +
Sbjct: 112 LGRDGFTHNMLASVHDYWKRRQVVRIKCKGVPTVDMDNVCTVLEDKTGGKIIS-RAGGVV 170
Query: 89 IMYRGKNY 96
++RG+NY
Sbjct: 171 YLFRGRNY 178
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 5 PEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEV 64
PE LT EE + GRK +G+ G+Y ++ ++ ++ +KV + + ++
Sbjct: 206 PEGLTVEEADSLRRRGRKIPAICHLGKNGVYLNLVRDVRNAFQADNLVKVDCEKMNTHDL 265
Query: 65 KEIAAELARLTGGIVLEIHEENTIIMYRG 93
++I A+L L ++L E I+M++G
Sbjct: 266 RKIGAKLKDLVPCVLLSFDHE-CILMWKG 293
>gi|254448654|ref|ZP_05062112.1| rhomboid family protein, putative [gamma proteobacterium HTCC5015]
gi|198261662|gb|EDY85949.1| rhomboid family protein, putative [gamma proteobacterium HTCC5015]
Length = 522
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 136 EQELELLRAQAETRSENRSDAAEDVQNTELDKPDFGSIPSMMECSENDPTTESLMASDSE 195
EQE++ LRAQA +S + AA + L P ++ ++ CS+ P + + +++
Sbjct: 341 EQEIQ-LRAQALEKSLDFKGAAVHYRKLWLANPSIETLAALFRCSKTSPESPAYVSAVKG 399
Query: 196 DLSDIFETDSETETEEKAELRPLYLDQFDKF-------PVQNDEEHEDFEEHLRQISIDS 248
L S+ T+ +A ++LD DK + N++ + L Q I +
Sbjct: 400 ALK------SDMATQNQALCASIFLDFLDKKWSTSNKPKLSNEQYQVGAKLLLDQDKIQA 453
Query: 249 RNAKSLGKDEDSSHFDEVDKMFLRAASLLKKQK 281
+ G + S HF++ ++ ++ + KKQK
Sbjct: 454 ADKLIAGMLKHSKHFEQAPQLAMQLSLAYKKQK 486
>gi|224110940|ref|XP_002315689.1| predicted protein [Populus trichocarpa]
gi|222864729|gb|EEF01860.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEIHEEN 86
V +G G+ ++ +H HWK+ + KV K ++ + L TGG + IH
Sbjct: 161 VNLGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKI--IHRVG 218
Query: 87 TII-MYRGKNY 96
++ ++RG+NY
Sbjct: 219 GVVYLFRGRNY 229
>gi|57339888|gb|AAW49931.1| hypothetical protein FTT0461 [synthetic construct]
Length = 127
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
K V +G +G+ + VIL + L HQ +KV V EE ++IA+E+ + T +++I
Sbjct: 42 LKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATRSELVQI 101
Query: 83 HEENTIIMYR 92
N +++YR
Sbjct: 102 I-GNILVLYR 110
>gi|326432055|gb|EGD77625.1| ubiquitin-activating enzyme E1 [Salpingoeca sp. ATCC 50818]
Length = 1209
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 56 VKTFSAEEVKEIAAELARLTGGIVLEIH---EENTIIMYRGKNYA---------QPPTEI 103
K + + IA A +TG ++LE++ + + YR NY +PP
Sbjct: 919 CKMIAGRIIPAIATSTASVTGLVMLELYKLVQHKPLEAYRNANYNLGANTYFFFEPPA-- 976
Query: 104 MSPRITLSRKKALDKSKYRDGLRAVKKYIPKLEQELELLRA 144
+ ++T S KK LD + ++ KY+ + E++L+ LRA
Sbjct: 977 -AKQLTSSTKKKLDSGSFEAAVQQFNKYLSQSEEKLQTLRA 1016
>gi|414884469|tpg|DAA60483.1| TPA: CRS2-associated factor 1, Precursor [Zea mays]
Length = 392
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 1 MTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFS 60
+T P LTP+E G + +G+ G+Y ++ + ++ ++V +
Sbjct: 14 VTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLN 73
Query: 61 AEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNY--AQPPTE 102
+ ++I A+L L I+L E+ I+M+RG ++ + PP E
Sbjct: 74 KSDCRKIGAKLKDLVPCILLSFEFEH-ILMWRGSDWKSSLPPLE 116
>gi|118497151|ref|YP_898201.1| RNA-binding protein [Francisella novicida U112]
gi|194323449|ref|ZP_03057226.1| conserved hypothetical protein [Francisella novicida FTE]
gi|208778944|ref|ZP_03246290.1| conserved hypothetical protein [Francisella novicida FTG]
gi|254372518|ref|ZP_04988007.1| hypothetical protein FTCG_00080 [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423057|gb|ABK89447.1| RNA-binding protein [Francisella novicida U112]
gi|151570245|gb|EDN35899.1| hypothetical protein FTCG_00080 [Francisella novicida GA99-3549]
gi|194322304|gb|EDX19785.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208744744|gb|EDZ91042.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 92
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
K V +G +G+ + VIL + L HQ +KV V EE ++IA+E+ + T +++I
Sbjct: 16 LKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATSSELVQI 75
Query: 83 HEENTIIMYR 92
N +++YR
Sbjct: 76 I-GNILVLYR 84
>gi|427737379|ref|YP_007056923.1| putative oxidoreductase, aryl-alcohol dehydrogenase like protein
[Rivularia sp. PCC 7116]
gi|427372420|gb|AFY56376.1| putative oxidoreductase, aryl-alcohol dehydrogenase like protein
[Rivularia sp. PCC 7116]
Length = 326
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 114 KALDKSKYRDGLR--AVKKYIPKLEQELELLRAQAETRSENRSDAAED------------ 159
K DKSKY G+R K+ IP + LE LRA AE+R++ + A +
Sbjct: 222 KYTDKSKYPQGIRNFLFKQLIPGAKSLLECLRAVAESRNKTMAQVAINWCICKGTIPIPG 281
Query: 160 VQNTELDKPDFGSIPSMMECSENDPTTESLMASDSEDLSDIFET 203
+N E + + G++ ++ E ++ ++D + + +IF+T
Sbjct: 282 AKNAEQARQNIGALGWELDAGEIAELDKAAASTDKKMVQNIFQT 325
>gi|56707603|ref|YP_169499.1| RNA-binding protein [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89256880|ref|YP_514242.1| RNA-binding protein [Francisella tularensis subsp. holarctica
LVS]
gi|110670074|ref|YP_666631.1| RNA-binding protein [Francisella tularensis subsp. tularensis
FSC198]
gi|115315259|ref|YP_763982.1| RNA-binding protein [Francisella tularensis subsp. holarctica
OSU18]
gi|156503055|ref|YP_001429120.1| CRS1/YhbY domain, RNA-binding protein [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|187932066|ref|YP_001892051.1| RNA-binding protein [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254368155|ref|ZP_04984175.1| RNA-binding protein [Francisella tularensis subsp. holarctica
257]
gi|254369754|ref|ZP_04985764.1| RNA-binding protein [Francisella tularensis subsp. holarctica
FSC022]
gi|254370121|ref|ZP_04986127.1| RNA-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254373979|ref|ZP_04989461.1| RNA-binding protein [Francisella novicida GA99-3548]
gi|254874424|ref|ZP_05247134.1| RNA-binding protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|290953622|ref|ZP_06558243.1| RNA-binding protein [Francisella tularensis subsp. holarctica
URFT1]
gi|379716863|ref|YP_005305199.1| RNA binding protein [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725467|ref|YP_005317653.1| RNA binding protein [Francisella tularensis subsp. tularensis
TI0902]
gi|385792474|ref|YP_005825450.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794226|ref|YP_005830632.1| hypothetical protein NE061598_02575 [Francisella tularensis
subsp. tularensis NE061598]
gi|421755092|ref|ZP_16192045.1| hypothetical protein B343_02578 [Francisella tularensis subsp.
tularensis 80700075]
gi|422939171|ref|YP_007012318.1| RNA-binding protein [Francisella tularensis subsp. holarctica
FSC200]
gi|423051252|ref|YP_007009686.1| hypothetical protein F92_08870 [Francisella tularensis subsp.
holarctica F92]
gi|54113941|gb|AAV29604.1| NT02FT1076 [synthetic construct]
gi|56604095|emb|CAG45094.1| RNA-binding protein [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89144711|emb|CAJ80042.1| RNA-binding protein [Francisella tularensis subsp. holarctica
LVS]
gi|110320407|emb|CAL08477.1| RNA-binding protein [Francisella tularensis subsp. tularensis
FSC198]
gi|115130158|gb|ABI83345.1| RNA-binding protein [Francisella tularensis subsp. holarctica
OSU18]
gi|134253965|gb|EBA53059.1| RNA-binding protein [Francisella tularensis subsp. holarctica
257]
gi|151568365|gb|EDN34019.1| RNA-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|151571699|gb|EDN37353.1| RNA-binding protein [Francisella novicida GA99-3548]
gi|156253658|gb|ABU62164.1| CRS1 / YhbY domain, RNA-binding protein [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|157122713|gb|EDO66842.1| RNA-binding protein [Francisella tularensis subsp. holarctica
FSC022]
gi|187712975|gb|ACD31272.1| RNA-binding protein [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254840423|gb|EET18859.1| RNA-binding protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158761|gb|ADA78152.1| hypothetical protein NE061598_02575 [Francisella tularensis
subsp. tularensis NE061598]
gi|328676620|gb|AEB27490.1| RNA binding protein [Francisella cf. novicida Fx1]
gi|377826916|gb|AFB80164.1| RNA binding protein [Francisella tularensis subsp. tularensis
TI0902]
gi|377828540|gb|AFB78619.1| RNA binding protein [Francisella tularensis subsp. tularensis
TIGB03]
gi|407294322|gb|AFT93228.1| RNA-binding protein [Francisella tularensis subsp. holarctica
FSC200]
gi|409088966|gb|EKM89021.1| hypothetical protein B343_02578 [Francisella tularensis subsp.
tularensis 80700075]
gi|421951974|gb|AFX71223.1| hypothetical protein F92_08870 [Francisella tularensis subsp.
holarctica F92]
Length = 92
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 23 CKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTGGIVLEI 82
K V +G +G+ + VIL + L HQ +KV V EE ++IA+E+ + T +++I
Sbjct: 16 LKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQIASEITQATRSELVQI 75
Query: 83 HEENTIIMYR 92
N +++YR
Sbjct: 76 I-GNILVLYR 84
>gi|218884426|ref|YP_002428808.1| putative RNA-binding protein containing KH domain
[Desulfurococcus kamchatkensis 1221n]
gi|218766042|gb|ACL11441.1| putative RNA-binding protein containing KH domain
[Desulfurococcus kamchatkensis 1221n]
Length = 97
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKV-IVKTFSAEE---VKEIAAELARLTGGIVLEI 82
V +G+ G+ QG I + L +KH +K+ ++K++ E + +A E+A LTGG + E+
Sbjct: 24 VQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRSEGFDIHRLAEEIAGLTGGKIYEV 83
Query: 83 HEENTIIMYRGKN 95
TI + RG+
Sbjct: 84 R-GFTITLIRGEG 95
>gi|194865359|ref|XP_001971390.1| GG14458 [Drosophila erecta]
gi|190653173|gb|EDV50416.1| GG14458 [Drosophila erecta]
Length = 325
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 197 LSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHLRQISIDSRNAKSL 254
LSDI ++D T +EKA+ RP +FD FP ++D+ E + R++S++ N L
Sbjct: 24 LSDISDSDESTSVDEKAQKRPDDYSEFDGFPFRDDD--ESLLDSSREMSVEDHNWDVL 79
>gi|153833452|ref|ZP_01986119.1| pullulanase [Vibrio harveyi HY01]
gi|148870227|gb|EDL69162.1| pullulanase [Vibrio harveyi HY01]
Length = 1328
Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 183 DPTTESLMASDSEDLSDIFETDSETETEEKAELRPLYLDQFDKFPVQNDEEHEDFEEHLR 242
DP + SL S + S + + DS A L+P D +D+ V+ DE+H +E HLR
Sbjct: 392 DPYSLSL--SQNSMYSQVVDLDS-------AALKPAEWDNYDRPTVEKDEDHVLYESHLR 442
Query: 243 QISI-DSRNAKSL 254
S D++ +SL
Sbjct: 443 DFSFSDTKGTQSL 455
>gi|390938937|ref|YP_006402675.1| putative RNA-binding protein containing KH domain, possibly
ribosomal protein [Desulfurococcus fermentans DSM
16532]
gi|390192044|gb|AFL67100.1| putative RNA-binding protein containing KH domain, possibly
ribosomal protein [Desulfurococcus fermentans DSM
16532]
Length = 99
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 27 VPVGRRGIYQGVILNMHLHWKKHQTLKV-IVKTFSAEE---VKEIAAELARLTGGIVLEI 82
V +G+ G+ QG I + L +KH +K+ ++K++ E + +A E+A LTGG + E+
Sbjct: 26 VQLGKNGVTQGFIEEVRLRLRKHGVVKIRVLKSYRRSEGFDIHRLAEEIAGLTGGKIYEV 85
Query: 83 HEENTIIMYRGKN 95
TI + RG+
Sbjct: 86 R-GFTITLIRGEG 97
>gi|406888285|gb|EKD34815.1| hypothetical protein ACD_75C02178G0007 [uncultured bacterium]
Length = 115
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 7 ILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKTFSAEEVKE 66
ILT + + + V +G+ G+ QG++ ++ H+ +KV + S E
Sbjct: 11 ILTTRQKQFLKGLAHPLSPLVQIGKEGMSQGIVNTINAELLNHELIKVKIGNNSGLEKHT 70
Query: 67 IAAELARLTGGIVLEIHEENTIIMYR 92
+ E A LTG I++++ + T ++Y+
Sbjct: 71 TSQEAAELTGSILVQLIGK-TFVLYK 95
>gi|345016680|ref|YP_004819033.1| CopG family transcriptional regulator [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032023|gb|AEM77749.1| transcriptional regulator NikR, CopG family [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 141
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 35 YQGVILNMHLHWKKHQTLKVIVKTFSAEEVKEIAAELARLTG 76
YQ +I MH+H KH L+V+V +A+E+ +IA E+ G
Sbjct: 85 YQNIISTMHVHLDKHNCLEVMVVKGTAKEITKIADEIISTKG 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,301,693,163
Number of Sequences: 23463169
Number of extensions: 176339637
Number of successful extensions: 628292
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 1097
Number of HSP's that attempted gapping in prelim test: 623397
Number of HSP's gapped (non-prelim): 4600
length of query: 282
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 141
effective length of database: 9,050,888,538
effective search space: 1276175283858
effective search space used: 1276175283858
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)