Query 023464
Match_columns 282
No_of_seqs 193 out of 1911
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:14:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023464.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023464hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.8E-78 6E-83 517.3 16.7 281 1-282 1-303 (303)
2 KOG0373 Serine/threonine speci 100.0 4.1E-73 8.8E-78 478.9 17.7 281 1-282 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 8.7E-69 1.9E-73 487.4 28.3 282 1-282 1-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.7E-68 8E-73 480.5 26.0 264 2-266 1-285 (285)
5 PTZ00480 serine/threonine-prot 100.0 2.3E-66 5E-71 473.1 26.5 265 2-268 10-304 (320)
6 cd07420 MPP_RdgC Drosophila me 100.0 4.5E-66 9.8E-71 471.8 26.9 259 3-263 7-321 (321)
7 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.4E-65 7.3E-70 466.7 25.7 264 3-268 16-307 (316)
8 cd07416 MPP_PP2B PP2B, metallo 100.0 5.4E-65 1.2E-69 464.2 26.2 264 2-268 2-300 (305)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 5.7E-65 1.2E-69 461.4 23.5 262 2-265 1-292 (293)
10 PTZ00244 serine/threonine-prot 100.0 1.7E-64 3.7E-69 457.9 24.7 260 3-264 4-293 (294)
11 KOG0374 Serine/threonine speci 100.0 1.3E-64 2.7E-69 463.2 20.9 250 15-265 31-303 (331)
12 smart00156 PP2Ac Protein phosp 100.0 4.4E-63 9.6E-68 445.4 24.3 248 16-265 1-270 (271)
13 KOG0371 Serine/threonine prote 100.0 5.9E-64 1.3E-68 431.7 13.9 280 2-282 19-319 (319)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 4.5E-61 9.8E-66 439.9 24.0 251 13-264 18-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 5.1E-60 1.1E-64 438.2 27.6 263 3-266 12-367 (377)
16 KOG0375 Serine-threonine phosp 100.0 1.2E-58 2.7E-63 414.2 10.5 263 3-268 48-345 (517)
17 KOG0377 Protein serine/threoni 100.0 6.2E-49 1.3E-53 359.2 11.8 265 2-268 120-435 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.8E-42 3.9E-47 322.6 13.1 271 4-275 171-470 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.5E-31 3.2E-36 233.8 16.9 194 46-250 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 8.1E-25 1.8E-29 194.6 14.4 179 43-259 1-230 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 1.4E-23 2.9E-28 182.4 13.2 157 46-237 1-198 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 2.3E-23 4.9E-28 184.1 14.5 184 43-257 1-225 (234)
23 PRK00166 apaH diadenosine tetr 99.9 1.3E-22 2.8E-27 182.9 14.6 195 43-253 1-260 (275)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 1.3E-22 2.9E-27 177.9 13.3 97 46-143 2-143 (222)
25 PRK11439 pphA serine/threonine 99.9 4.4E-22 9.5E-27 174.1 13.2 172 43-251 17-217 (218)
26 cd07422 MPP_ApaH Escherichia c 99.9 1.2E-21 2.6E-26 174.9 13.1 112 45-157 1-135 (257)
27 PHA02239 putative protein phos 99.9 5.4E-21 1.2E-25 168.9 12.7 155 43-238 1-221 (235)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.6E-20 3.5E-25 162.9 15.0 165 43-235 1-194 (207)
29 TIGR00668 apaH bis(5'-nucleosy 99.8 2.3E-21 5E-26 173.7 9.0 113 43-156 1-136 (279)
30 cd07421 MPP_Rhilphs Rhilph pho 99.8 2E-20 4.3E-25 168.1 13.8 62 44-105 3-80 (304)
31 PRK09968 serine/threonine-spec 99.8 9.7E-20 2.1E-24 159.3 12.8 102 43-144 15-145 (218)
32 cd00841 MPP_YfcE Escherichia c 99.2 4.6E-10 9.9E-15 92.4 12.2 142 44-253 1-148 (155)
33 PRK09453 phosphodiesterase; Pr 99.1 3.9E-10 8.4E-15 95.7 11.2 64 43-106 1-77 (182)
34 TIGR00040 yfcE phosphoesterase 99.1 7.8E-10 1.7E-14 91.7 11.1 82 43-142 1-88 (158)
35 PF12850 Metallophos_2: Calcin 99.0 2.3E-09 5E-14 87.6 10.0 137 43-238 1-140 (156)
36 COG0639 ApaH Diadenosine tetra 98.9 3.8E-09 8.2E-14 84.8 7.5 140 98-239 6-154 (155)
37 PF00149 Metallophos: Calcineu 98.8 8.5E-09 1.8E-13 83.0 7.0 61 44-104 2-77 (200)
38 cd07379 MPP_239FB Homo sapiens 98.8 2.1E-08 4.5E-13 80.9 7.5 112 44-221 1-120 (135)
39 cd07394 MPP_Vps29 Homo sapiens 98.7 2.7E-07 5.9E-12 78.3 13.5 121 44-236 1-135 (178)
40 cd07397 MPP_DevT Myxococcus xa 98.7 2.7E-08 5.9E-13 87.8 7.1 56 44-105 2-63 (238)
41 PRK05340 UDP-2,3-diacylglucosa 98.4 1.4E-06 3E-11 77.3 10.0 205 43-262 1-238 (241)
42 cd07388 MPP_Tt1561 Thermus the 98.4 1.1E-05 2.3E-10 71.0 15.3 63 43-105 5-75 (224)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.4 4.4E-06 9.6E-11 70.2 12.2 59 45-105 1-65 (188)
44 COG0622 Predicted phosphoester 98.3 1.4E-05 3.1E-10 67.4 12.1 159 43-266 2-167 (172)
45 cd00838 MPP_superfamily metall 98.3 4.4E-06 9.5E-11 64.9 8.3 108 46-221 1-119 (131)
46 cd07404 MPP_MS158 Microscilla 98.1 5.8E-06 1.3E-10 68.8 6.1 60 45-105 1-68 (166)
47 cd07403 MPP_TTHA0053 Thermus t 98.1 2.4E-05 5.3E-10 62.7 8.8 101 46-221 1-107 (129)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.0 1.8E-05 3.9E-10 69.7 8.0 194 45-255 1-230 (231)
49 cd07399 MPP_YvnB Bacillus subt 98.0 0.00012 2.7E-09 63.7 12.6 71 193-264 136-213 (214)
50 cd07400 MPP_YydB Bacillus subt 98.0 7.9E-05 1.7E-09 60.2 10.4 29 193-221 101-129 (144)
51 cd07395 MPP_CSTP1 Homo sapiens 97.7 0.0014 3E-08 58.5 14.9 58 195-255 196-254 (262)
52 cd07402 MPP_GpdQ Enterobacter 97.5 0.0016 3.6E-08 57.0 12.5 61 44-104 1-82 (240)
53 COG2908 Uncharacterized protei 97.5 0.00034 7.4E-09 61.4 7.9 190 46-256 1-229 (237)
54 cd07396 MPP_Nbla03831 Homo sap 97.5 0.0026 5.5E-08 57.2 13.7 61 44-104 2-85 (267)
55 cd07398 MPP_YbbF-LpxH Escheric 97.5 0.00018 3.8E-09 62.1 5.3 28 193-220 177-204 (217)
56 PF06874 FBPase_2: Firmicute f 97.4 0.0012 2.6E-08 65.1 9.8 73 193-266 507-587 (640)
57 COG2129 Predicted phosphoester 97.3 0.016 3.5E-07 50.6 15.7 202 42-262 3-224 (226)
58 cd07385 MPP_YkuE_C Bacillus su 97.3 0.0002 4.4E-09 62.0 3.8 62 43-104 2-75 (223)
59 PRK04036 DNA polymerase II sma 97.3 0.0054 1.2E-07 60.3 14.0 99 43-142 244-388 (504)
60 PRK11340 phosphodiesterase Yae 97.2 0.0004 8.7E-09 62.7 4.8 62 43-104 50-124 (271)
61 TIGR03729 acc_ester putative p 97.0 0.00084 1.8E-08 59.3 4.2 61 44-104 1-73 (239)
62 cd07383 MPP_Dcr2 Saccharomyces 96.9 0.0046 1E-07 52.9 8.3 41 196-238 155-195 (199)
63 cd07390 MPP_AQ1575 Aquifex aeo 96.9 0.0023 4.9E-08 53.5 6.1 90 45-140 1-115 (168)
64 PRK11148 cyclic 3',5'-adenosin 96.9 0.092 2E-06 47.3 16.9 62 43-104 15-97 (275)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 96.4 0.0052 1.1E-07 55.3 5.4 40 45-84 1-43 (262)
66 COG1409 Icc Predicted phosphoh 96.3 0.14 3.1E-06 45.5 14.1 61 44-104 2-77 (301)
67 PHA02546 47 endonuclease subun 96.3 0.0047 1E-07 57.7 4.2 62 43-104 1-88 (340)
68 KOG3325 Membrane coat complex 96.2 0.02 4.4E-07 46.8 7.1 124 45-237 3-137 (183)
69 TIGR00619 sbcd exonuclease Sbc 96.2 0.0067 1.5E-07 54.2 4.5 63 43-105 1-88 (253)
70 cd08165 MPP_MPPE1 human MPPE1 96.1 0.018 4E-07 47.6 6.7 43 191-234 108-150 (156)
71 cd00839 MPP_PAPs purple acid p 96.1 0.12 2.5E-06 46.7 12.3 25 194-218 182-206 (294)
72 PF08321 PPP5: PPP5 TPR repeat 96.1 0.014 3E-07 44.4 5.2 39 3-41 57-95 (95)
73 TIGR00024 SbcD_rel_arch putati 96.1 0.016 3.5E-07 50.9 6.4 64 43-106 15-103 (225)
74 cd07391 MPP_PF1019 Pyrococcus 96.0 0.014 3E-07 48.9 5.3 51 58-108 30-91 (172)
75 cd07386 MPP_DNA_pol_II_small_a 95.6 0.023 5.1E-07 50.2 5.4 38 46-83 2-49 (243)
76 COG1408 Predicted phosphohydro 95.5 0.076 1.7E-06 48.4 8.5 63 44-106 46-119 (284)
77 cd00840 MPP_Mre11_N Mre11 nucl 95.1 0.027 5.8E-07 48.4 4.1 62 44-105 1-89 (223)
78 cd07393 MPP_DR1119 Deinococcus 94.9 0.033 7.2E-07 49.0 4.3 60 45-104 1-83 (232)
79 COG4186 Predicted phosphoester 94.8 0.045 9.7E-07 45.2 4.4 67 68-139 44-115 (186)
80 cd00845 MPP_UshA_N_like Escher 94.7 0.031 6.8E-07 49.4 3.6 61 44-104 2-81 (252)
81 cd07384 MPP_Cdc1_like Saccharo 94.6 0.073 1.6E-06 44.7 5.4 35 200-236 129-167 (171)
82 PRK10966 exonuclease subunit S 94.2 0.044 9.6E-07 52.4 3.6 62 43-104 1-86 (407)
83 PLN02533 probable purple acid 93.6 0.39 8.5E-06 46.3 9.0 24 195-218 312-335 (427)
84 cd07410 MPP_CpdB_N Escherichia 93.1 0.081 1.8E-06 47.6 3.1 61 44-104 2-94 (277)
85 cd07380 MPP_CWF19_N Schizosacc 93.0 0.12 2.6E-06 42.6 3.8 41 46-86 1-43 (150)
86 cd08163 MPP_Cdc1 Saccharomyces 92.8 0.99 2.1E-05 40.5 9.6 24 192-215 203-226 (257)
87 cd07401 MPP_TMEM62_N Homo sapi 91.5 0.28 6.2E-06 43.8 4.6 26 197-222 190-215 (256)
88 TIGR00583 mre11 DNA repair pro 91.3 0.3 6.4E-06 46.8 4.7 50 43-92 4-65 (405)
89 cd07387 MPP_PolD2_C PolD2 (DNA 90.1 8.2 0.00018 34.7 12.5 51 207-262 205-257 (257)
90 cd07408 MPP_SA0022_N Staphyloc 89.8 0.36 7.9E-06 43.0 3.7 61 44-104 2-81 (257)
91 cd08166 MPP_Cdc1_like_1 unchar 89.8 0.37 7.9E-06 41.5 3.5 27 196-222 126-152 (195)
92 PF14582 Metallophos_3: Metall 89.7 0.19 4.1E-06 44.2 1.7 48 43-90 6-53 (255)
93 COG0420 SbcD DNA repair exonuc 88.6 0.7 1.5E-05 43.7 4.9 62 43-104 1-87 (390)
94 KOG0376 Serine-threonine phosp 88.0 0.77 1.7E-05 44.4 4.7 82 14-97 13-99 (476)
95 cd07412 MPP_YhcR_N Bacillus su 85.0 1.1 2.3E-05 40.8 3.9 61 44-104 2-87 (288)
96 cd07411 MPP_SoxB_N Thermus the 82.9 1.3 2.7E-05 39.7 3.4 50 55-104 35-94 (264)
97 PRK09419 bifunctional 2',3'-cy 80.9 1.4 3E-05 47.9 3.3 61 44-104 662-735 (1163)
98 cd07409 MPP_CD73_N CD73 ecto-5 78.5 2.6 5.6E-05 38.1 3.9 61 44-104 2-93 (281)
99 COG1407 Predicted ICC-like pho 77.9 6.6 0.00014 34.8 6.1 95 42-145 19-141 (235)
100 KOG2476 Uncharacterized conser 77.6 3.2 7E-05 40.1 4.3 56 42-97 5-62 (528)
101 cd07406 MPP_CG11883_N Drosophi 73.4 3.8 8.3E-05 36.5 3.5 53 52-104 20-82 (257)
102 KOG0918 Selenium-binding prote 72.3 0.42 9.1E-06 45.2 -3.0 177 70-254 48-250 (476)
103 cd07378 MPP_ACP5 Homo sapiens 70.4 5.5 0.00012 35.4 3.9 24 195-218 191-214 (277)
104 TIGR00282 metallophosphoestera 66.2 7.5 0.00016 35.1 3.8 62 43-104 1-70 (266)
105 COG3855 Fbp Uncharacterized pr 66.2 4 8.8E-05 39.5 2.1 43 193-235 514-562 (648)
106 cd08164 MPP_Ted1 Saccharomyces 65.7 4.1 8.9E-05 35.0 1.9 37 49-85 23-60 (193)
107 COG0737 UshA 5'-nucleotidase/2 63.5 5.7 0.00012 39.1 2.7 62 43-104 27-114 (517)
108 cd07407 MPP_YHR202W_N Saccharo 62.8 5.5 0.00012 36.2 2.3 61 44-104 7-96 (282)
109 KOG2863 RNA lariat debranching 60.2 10 0.00022 35.7 3.5 38 43-80 1-41 (456)
110 KOG3662 Cell division control 60.1 8 0.00017 37.0 2.9 29 58-86 81-110 (410)
111 smart00854 PGA_cap Bacterial c 59.3 18 0.0004 31.6 5.0 38 199-239 199-236 (239)
112 PRK09419 bifunctional 2',3'-cy 58.6 7.7 0.00017 42.3 2.9 62 43-104 42-138 (1163)
113 cd08162 MPP_PhoA_N Synechococc 56.6 10 0.00023 34.9 3.0 60 45-104 3-90 (313)
114 PF06874 FBPase_2: Firmicute f 56.3 8.9 0.00019 38.6 2.6 33 71-103 186-222 (640)
115 PRK09420 cpdB bifunctional 2', 55.3 12 0.00025 38.3 3.3 63 42-104 25-121 (649)
116 COG1768 Predicted phosphohydro 53.9 1.1E+02 0.0024 26.3 8.3 37 68-104 42-85 (230)
117 cd07405 MPP_UshA_N Escherichia 53.8 9.5 0.00021 34.5 2.3 61 44-104 2-86 (285)
118 TIGR01390 CycNucDiestase 2',3' 53.6 11 0.00024 38.2 2.9 61 44-104 4-98 (626)
119 cd00842 MPP_ASMase acid sphing 51.4 18 0.00039 32.6 3.7 40 45-85 40-84 (296)
120 PF04042 DNA_pol_E_B: DNA poly 45.8 27 0.00058 29.6 3.7 39 45-83 1-45 (209)
121 COG1311 HYS2 Archaeal DNA poly 43.8 3.3E+02 0.0071 26.8 12.7 52 207-264 420-472 (481)
122 KOG1432 Predicted DNA repair e 43.6 21 0.00045 33.5 2.7 67 197-266 291-362 (379)
123 cd07381 MPP_CapA CapA and rela 39.5 50 0.0011 28.7 4.6 39 197-238 199-237 (239)
124 PRK11907 bifunctional 2',3'-cy 37.2 34 0.00073 35.9 3.5 62 43-104 116-212 (814)
125 TIGR01530 nadN NAD pyrophospha 37.1 39 0.00085 33.7 3.8 49 56-104 35-93 (550)
126 PRK09558 ushA bifunctional UDP 34.5 35 0.00077 33.9 3.1 62 43-104 35-120 (551)
127 COG0634 Hpt Hypoxanthine-guani 33.9 2.9E+02 0.0063 23.4 7.9 75 14-92 10-115 (178)
128 cd07382 MPP_DR1281 Deinococcus 33.7 52 0.0011 29.5 3.7 60 44-103 1-68 (255)
129 PF09587 PGA_cap: Bacterial ca 32.0 90 0.0019 27.4 5.0 40 197-239 208-247 (250)
130 KOG2310 DNA repair exonuclease 31.2 78 0.0017 31.6 4.6 55 43-97 14-80 (646)
131 COG3855 Fbp Uncharacterized pr 30.2 23 0.00051 34.5 0.9 26 72-97 193-218 (648)
132 PF12641 Flavodoxin_3: Flavodo 29.6 1.8E+02 0.0038 24.1 6.0 52 46-97 2-66 (160)
133 TIGR01201 HU_rel DNA-binding p 29.1 81 0.0018 25.6 3.8 33 1-33 31-63 (145)
134 smart00411 BHL bacterial (prok 28.8 1.1E+02 0.0025 22.0 4.3 33 1-33 1-33 (90)
135 TIGR02608 delta_60_rpt delta-6 25.2 1.3E+02 0.0028 20.3 3.6 31 225-257 10-40 (55)
136 TIGR03729 acc_ester putative p 25.0 93 0.002 27.0 3.8 29 191-219 195-223 (239)
137 PRK09418 bifunctional 2',3'-cy 24.6 69 0.0015 33.5 3.2 63 42-104 39-141 (780)
138 PTZ00235 DNA polymerase epsilo 22.4 63 0.0014 29.6 2.2 40 43-82 28-76 (291)
139 COG3792 Uncharacterized protei 22.1 20 0.00044 28.3 -0.9 33 45-84 23-61 (122)
140 PF02609 Exonuc_VII_S: Exonucl 21.8 2.4E+02 0.0051 18.5 4.4 31 3-34 8-38 (53)
141 cd01533 4RHOD_Repeat_2 Member 21.3 3.3E+02 0.0071 20.1 5.8 80 7-94 3-87 (109)
142 COG4320 Uncharacterized protei 21.3 59 0.0013 30.3 1.7 59 32-97 46-107 (410)
143 PF02885 Glycos_trans_3N: Glyc 21.2 1.4E+02 0.0031 20.4 3.4 26 3-28 2-27 (66)
144 TIGR00550 nadA quinolinate syn 20.3 1.3E+02 0.0028 27.8 3.8 36 42-80 28-63 (310)
145 PF04839 PSRP-3_Ycf65: Plastid 20.3 2.7E+02 0.0059 18.4 4.2 30 4-33 14-43 (49)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-78 Score=517.30 Aligned_cols=281 Identities=59% Similarity=1.157 Sum_probs=270.7
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccc
Q 023464 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (282)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v 80 (282)
+++++.++++++.+.+.++++..||.++.++|.+|++++.++.|++|+|||||++.||+.+|+..|.+++.+|+||||||
T Consensus 1 ~dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyV 80 (303)
T KOG0372|consen 1 SDLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYV 80 (303)
T ss_pred CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHhh---------------------hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEec
Q 023464 81 DRGYNSLEVFTILLLLK---------------------VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 139 (282)
Q Consensus 81 DrG~~s~evl~~l~~lk---------------------~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vH 139 (282)
|||-.|+|++.+|+.|| +|||++||.+|||+..+|..+.+.|++||++|+|++++||||
T Consensus 81 DRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVH 160 (303)
T KOG0372|consen 81 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVH 160 (303)
T ss_pred ccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEc
Confidence 99999999999999999 788889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccc
Q 023464 140 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 219 (282)
Q Consensus 140 gGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 219 (282)
||+||++.+++||+.+.|.+++|.+++++|+|||||.+..+|.-+|||.|+.||++++++|++.||++.|+|+||.+.+|
T Consensus 161 GGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eG 240 (303)
T KOG0372|consen 161 GGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEG 240 (303)
T ss_pred CCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCCCC-CCCCCCCCCCCC
Q 023464 220 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQ-MRGPRTGVPYFL 282 (282)
Q Consensus 220 ~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 282 (282)
|++.| +++++||||||||||.++|.||+|+++++....|..|++.|+.+- .+..+.+.+||+
T Consensus 241 yk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 241 YKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 99999 999999999999999999999999999999999999999997743 344566668885
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-73 Score=478.93 Aligned_cols=281 Identities=78% Similarity=1.388 Sum_probs=274.7
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccc
Q 023464 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (282)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v 80 (282)
|+++++|+.+++...++++|+..||+-++++|..|.+++.++.|+.|.|||||++.+|.++|+..|--|+..|||+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred cCCCChHHHHHHHHHhh---------------------hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEec
Q 023464 81 DRGYNSLEVFTILLLLK---------------------VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 139 (282)
Q Consensus 81 DrG~~s~evl~~l~~lk---------------------~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vH 139 (282)
|||-.|+|++.+|+.|| +|||+|||..+||+...|+.+.+.|+.|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999 788999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccc
Q 023464 140 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 219 (282)
Q Consensus 140 gGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 219 (282)
||+||++.+++||+.|.|.+++|.++.++|++||||++.+.|..++||.|++||.+.+.+|+..|++++|.|+||.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCe-EEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCCCCCCCCCCCCCCCC
Q 023464 220 LKYMFQDKG-LVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 282 (282)
Q Consensus 220 ~~~~~~~~~-~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (282)
|++.| +.| ++||||||||||.++|.|++|.++++++.+++.|.+.|..+++..+|++.+|||
T Consensus 244 ~KymF-~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMF-DEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhcc-CCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 99999 555 999999999999999999999999999999999999999988888999999997
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=8.7e-69 Score=487.40 Aligned_cols=282 Identities=63% Similarity=1.147 Sum_probs=260.3
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccc
Q 023464 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (282)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v 80 (282)
|+++++++++.++..++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|+||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyV 80 (303)
T PTZ00239 1 MDIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFV 80 (303)
T ss_pred CCHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEc
Confidence 68999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred cCCCChHHHHHHHHHhh---------hcCchh------------HHHhhcCCccccccccchhcccceEEEEeCcEEEec
Q 023464 81 DRGYNSLEVFTILLLLK---------VYGFYD------------ECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 139 (282)
Q Consensus 81 DrG~~s~evl~~l~~lk---------~~G~~e------------e~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vH 139 (282)
|||++|+|++.+|+++| ++|||| |+..+|+...+|..+.++|++||++|+++++++|||
T Consensus 81 DRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvH 160 (303)
T PTZ00239 81 DRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVH 160 (303)
T ss_pred CCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEc
Confidence 99999999999999987 566665 577888777789999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccc
Q 023464 140 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 219 (282)
Q Consensus 140 gGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 219 (282)
||++|...++++++.++|+.+.|.++++.|+|||||.+..+|.+++||.|+.||++++++||+++|+++||||||++++|
T Consensus 161 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G 240 (303)
T PTZ00239 161 GGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEG 240 (303)
T ss_pred CccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccc
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred eEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCCCCCCCCCCCCCCCC
Q 023464 220 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 282 (282)
Q Consensus 220 ~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (282)
|++.+.+++|+||||||+||+..+|+||+|.++++.++.|++|+|.|.+.....++..+.||+
T Consensus 241 ~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 241 YKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred eEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 998773556999999999999999999999999999999999999988732223333346663
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.7e-68 Score=480.50 Aligned_cols=264 Identities=64% Similarity=1.205 Sum_probs=252.1
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeeccccc
Q 023464 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (282)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 81 (282)
+++++++++.++..++++++.+||++|++++++||+++++++|++||||||||+.+|.++|+..++++.++|||||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred CCCChHHHHHHHHHhh---------hcCchh------------HHHhhcCCccccccccchhcccceEEEEeCcEEEecC
Q 023464 82 RGYNSLEVFTILLLLK---------VYGFYD------------ECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 140 (282)
Q Consensus 82 rG~~s~evl~~l~~lk---------~~G~~e------------e~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHg 140 (282)
||++|+|++.+++++| ++|||| ||..+|+...+|..+.++|++||++|+++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 9999999999999998 667776 5777887668999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccce
Q 023464 141 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 220 (282)
Q Consensus 141 Gi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 220 (282)
||+|...++++++.++|+.+.+.++++.++|||||.+..+|.+++||.|+.||++++++||+++|+++||||||++++||
T Consensus 161 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 240 (285)
T cd07415 161 GLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGY 240 (285)
T ss_pred CCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceE
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccC
Q 023464 221 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETE 266 (282)
Q Consensus 221 ~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 266 (282)
++.+ +++++||||||+||+..+|+||+|.|+++++++|++|+|.|
T Consensus 241 ~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 241 QWMF-DDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EEec-CCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9988 99999999999999988999999999999999999999875
No 5
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.3e-66 Score=473.15 Aligned_cols=265 Identities=39% Similarity=0.837 Sum_probs=249.1
Q ss_pred CHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCce
Q 023464 2 DLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNY 73 (282)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~ 73 (282)
+++++++++.+.. .++++++.+||++|+++|++||++++++++++|||||||++.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 5888999998654 69999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccCCCChHHHHHHHHHhh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEe
Q 023464 74 IFMGDFVDRGYNSLEVFTILLLLK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIID 132 (282)
Q Consensus 74 vfLGD~vDrG~~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~ 132 (282)
||||||||||++|+||+.+++++| ++||||. +..+|+ ..+|..++++|++||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 999999999999999999999997 6677764 556663 578999999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEe
Q 023464 133 GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 211 (282)
Q Consensus 133 ~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 211 (282)
+++|||||||+|.+.++++|+.++||.+.+..+++.++|||||.. ..+|.+++||.|++||++++++||+++|+++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999984 6799999999999999999999999999999999
Q ss_pred cccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCC
Q 023464 212 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 268 (282)
Q Consensus 212 gH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 268 (282)
|||++++||++.+ +++|+||||||+||+..+|.||+|.|++++.+.|.+|+|.+..
T Consensus 249 ~Hq~v~~G~~~~~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 249 AHQVVEDGYEFFS-KRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred cCccccCceEEeC-CCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999987 9999999999999998899999999999999999999988776
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4.5e-66 Score=471.83 Aligned_cols=259 Identities=32% Similarity=0.551 Sum_probs=234.1
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecC----CcceeecCCCCHHHHHHHHHhCCCCC-CCceeeec
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFMG 77 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~----~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vfLG 77 (282)
++.+++++++++.++++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|+++ +++|||||
T Consensus 7 ~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLG 86 (321)
T cd07420 7 IDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNG 86 (321)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEec
Confidence 78999999999999999999999999999999999999975 89999999999999999999999885 47899999
Q ss_pred ccccCCCChHHHHHHHHHhh---------hcCchh------------HHHhhcCC--ccccccccchhcccceEEEEeCc
Q 023464 78 DFVDRGYNSLEVFTILLLLK---------VYGFYD------------ECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGT 134 (282)
Q Consensus 78 D~vDrG~~s~evl~~l~~lk---------~~G~~e------------e~~~~~~~--~~~~~~~~~~f~~LPl~~~i~~~ 134 (282)
||||||++|+||+.+|++|| ++|||| ||..+|+. ..+|..++++|++||++|+++++
T Consensus 87 DyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~ 166 (321)
T cd07420 87 DFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNK 166 (321)
T ss_pred cccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCC
Confidence 99999999999999999998 566665 57788874 57999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHhhhcccc-----CCC----------------------CCCccccccCCCCCCCC-cccCCC
Q 023464 135 VLCVHGGLSPDIRTIDQIRVIERNCE-----IPH----------------------EGPFCDLMWSDPEDIET-WAVSPR 186 (282)
Q Consensus 135 ~l~vHgGi~~~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~~llWsdp~~~~~-~~~~~r 186 (282)
+|||||||++ ..++++|+.|+|+.. .|. .+++.|+|||||.+..+ |.+++|
T Consensus 167 i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~R 245 (321)
T cd07420 167 ILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFR 245 (321)
T ss_pred EEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCC
Confidence 9999999997 468999999988421 111 13578999999996544 677789
Q ss_pred CCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEee
Q 023464 187 GAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFT 263 (282)
Q Consensus 187 g~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 263 (282)
|.|+.||++++++||+++|+++||||||++++||++.+ +++++||||||+||+..+|.||+|.|+++.+++|.+|.
T Consensus 246 G~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 246 GGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 99999999999999999999999999999999999988 99999999999999988999999999999999998874
No 7
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.4e-65 Score=466.71 Aligned_cols=264 Identities=36% Similarity=0.633 Sum_probs=244.8
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCC----cceeecCCCCHHHHHHHHHhCCCCCC-Cceeeec
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP----VTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMG 77 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~----i~vvGDiHG~~~~l~~il~~~~~~~~-~~~vfLG 77 (282)
+++++++++++..++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..++++. ++|||||
T Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLG 95 (316)
T cd07417 16 VKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 95 (316)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEe
Confidence 788999999999999999999999999999999999999755 99999999999999999999998765 5799999
Q ss_pred ccccCCCChHHHHHHHHHhh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEeCcEE
Q 023464 78 DFVDRGYNSLEVFTILLLLK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 136 (282)
Q Consensus 78 D~vDrG~~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l 136 (282)
||||||++|+||+.+|+++| ++||||. +..+|+ ..+|..+.++|++||++++++++++
T Consensus 96 DyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~~~ 174 (316)
T cd07417 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGKVL 174 (316)
T ss_pred eEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCeEE
Confidence 99999999999999999997 7899985 333332 4678889999999999999999999
Q ss_pred EecCCC-CCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccc
Q 023464 137 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 215 (282)
Q Consensus 137 ~vHgGi-~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~ 215 (282)
|||||+ ++...+++++++++|+.+.+.++.+.++|||||.+..+|.+++||.|+.||++++++||+++|+++||||||+
T Consensus 175 ~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 254 (316)
T cd07417 175 VVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV 254 (316)
T ss_pred EEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc
Confidence 999999 5667889999999999888888999999999999878899999999999999999999999999999999999
Q ss_pred cccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcC-CCceEEEEeeccCCC
Q 023464 216 VQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMEREVKFFTETEEN 268 (282)
Q Consensus 216 ~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~ 268 (282)
+++||++.+ +++++||||||+||+..+|.||++.|++ +++++|++|+|.|.+
T Consensus 255 ~~~G~~~~~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 255 KDEGYEVEH-DGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred cceeEEEec-CCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999988 9999999999999998999999999999 899999999998776
No 8
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=5.4e-65 Score=464.17 Aligned_cols=264 Identities=39% Similarity=0.709 Sum_probs=244.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeeccccc
Q 023464 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (282)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 81 (282)
+|+-+++++++++.++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEeCcEEEecC
Q 023464 82 RGYNSLEVFTILLLLK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 140 (282)
Q Consensus 82 rG~~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHg 140 (282)
||++|+||+.+|+++| ++||||. +..+| ..++|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999997 6788875 33444 246788899999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCC-------CCcccC-CCCCeeeeChhhHHHHHHhcCCcEEEec
Q 023464 141 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDI-------ETWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRA 212 (282)
Q Consensus 141 Gi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~-------~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrg 212 (282)
|++|.+.++++|+.++|+.+.+..+++.|+|||||... .+|.++ +||.|+.||++++++||+++|+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 99999999999999999999888999999999999732 247654 8999999999999999999999999999
Q ss_pred ccccccceEEEecCC------eEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCC
Q 023464 213 HQLVQEGLKYMFQDK------GLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 268 (282)
Q Consensus 213 H~~~~~G~~~~~~~~------~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 268 (282)
||++++||++.+ ++ +++||||||+||+..+|+||+|.++++. ..|.+|+|.|++
T Consensus 241 He~~~~G~~~~~-~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 241 HEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred ccccccceEEec-CCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 999999999976 65 9999999999999889999999999874 799999999876
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=5.7e-65 Score=461.37 Aligned_cols=262 Identities=40% Similarity=0.860 Sum_probs=244.4
Q ss_pred CHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCce
Q 023464 2 DLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNY 73 (282)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~ 73 (282)
+++++++++.+.. .++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.++|
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~ 80 (293)
T cd07414 1 DIDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 80 (293)
T ss_pred CHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceE
Confidence 3678888888655 69999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccCCCChHHHHHHHHHhh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEe
Q 023464 74 IFMGDFVDRGYNSLEVFTILLLLK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIID 132 (282)
Q Consensus 74 vfLGD~vDrG~~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~ 132 (282)
||||||||||++|+|++.+++++| ++||||. +..+|+ ..+|..+.++|++||++|+++
T Consensus 81 lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~ 159 (293)
T cd07414 81 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIID 159 (293)
T ss_pred EEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhC
Confidence 999999999999999999999997 6788875 444443 468899999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEe
Q 023464 133 GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 211 (282)
Q Consensus 133 ~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 211 (282)
++++|||||++|...++++++.++|+.+.+..+++.++|||||.. ..+|.+++||.|+.||++++++||+++|+++|||
T Consensus 160 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 239 (293)
T cd07414 160 EKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICR 239 (293)
T ss_pred CcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEE
Confidence 999999999999999999999999999988889999999999984 6889999999999999999999999999999999
Q ss_pred cccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeecc
Q 023464 212 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 265 (282)
Q Consensus 212 gH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 265 (282)
|||++++||++.+ +++|+||||||+||+..+|+||+|.|+++.+++|+.|+|.
T Consensus 240 ~He~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 240 AHQVVEDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CCccccCeEEEeC-CCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999977 9999999999999998899999999999999999999864
No 10
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.7e-64 Score=457.88 Aligned_cols=260 Identities=34% Similarity=0.752 Sum_probs=241.4
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCcee
Q 023464 3 LDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYI 74 (282)
Q Consensus 3 ~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~v 74 (282)
++.+++++.+.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.++|+
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 566777776533 689999999999999999999999999999999999999999999999999999889999
Q ss_pred eecccccCCCChHHHHHHHHHhh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEeC
Q 023464 75 FMGDFVDRGYNSLEVFTILLLLK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIIDG 133 (282)
Q Consensus 75 fLGD~vDrG~~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~~ 133 (282)
|||||||||++|+||+.+++++| ++||||. +..+|+ ..+|..+.++|++||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999887 6788873 556664 5688999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEec
Q 023464 134 TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRA 212 (282)
Q Consensus 134 ~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 212 (282)
+++|||||++|.+.++++++.++|+.+.+.++.+.|++||||.+ ..+|.+++||.|+.||++++++||+++|+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999889999999999985 67999999999999999999999999999999999
Q ss_pred ccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeec
Q 023464 213 HQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 264 (282)
Q Consensus 213 H~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 264 (282)
||++++||++.+ +++++||||||+||+..+|+||+|.|+++..++|..|++
T Consensus 243 Hq~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFA-SRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcC-CCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999977 999999999999999889999999999999999998865
No 11
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.3e-64 Score=463.20 Aligned_cols=250 Identities=42% Similarity=0.908 Sum_probs=241.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCC-CCCCCceeeecccccCCCChHHHHHHH
Q 023464 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLEVFTIL 93 (282)
Q Consensus 15 ~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 93 (282)
.++++++.+||..+.++|.++|+++++++||.|+|||||++.+|.++|...| +|++++|||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhh---------------------hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEecCCCCCCCCCHHHH
Q 023464 94 LLLK---------------------VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQI 152 (282)
Q Consensus 94 ~~lk---------------------~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i 152 (282)
+++| +|||++||..+|+...+|..|++.|++||++|+|+++++|+|||++|.+.++++|
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 9999 5688889999997678999999999999999999999999999999999999999
Q ss_pred HhhhccccCCCCCCccccccCCCCC-CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEE
Q 023464 153 RVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVT 231 (282)
Q Consensus 153 ~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~it 231 (282)
+.|.||.+.+..+++.|++||||.. ..+|.++.||.++.||++++++||+++++++||||||++++||++.. +++++|
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa-~r~lvT 269 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFA-GRKLVT 269 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEec-CceEEE
Confidence 9999999999999999999999994 79999999999999999999999999999999999999999999954 999999
Q ss_pred EecCCCcccCCCCceEEEEEcCCCceEEEEeecc
Q 023464 232 VWSAPNYCYRCGNVASILSFNENMEREVKFFTET 265 (282)
Q Consensus 232 ifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 265 (282)
|||||+||+.+.|.||++.+++++.++|..+.|.
T Consensus 270 IFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 270 IFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999995
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.4e-63 Score=445.40 Aligned_cols=248 Identities=46% Similarity=0.860 Sum_probs=233.4
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHH
Q 023464 16 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLL 95 (282)
Q Consensus 16 ~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 95 (282)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|||||||||||++|+||+.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred hh---------hcCchhH------------HHhhcCCccccccccchhcccceEEEEeCcEEEecCCCCCCCCCHHHHHh
Q 023464 96 LK---------VYGFYDE------------CQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRV 154 (282)
Q Consensus 96 lk---------~~G~~ee------------~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~ 154 (282)
+| ++||||. +..+|+ ..+|..+.++|++||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 97 6788875 444553 5688999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCccccccCCCC-CCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEe
Q 023464 155 IERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVW 233 (282)
Q Consensus 155 i~r~~~~~~~~~~~~llWsdp~-~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itif 233 (282)
++|+.+.+.++.+.++|||||. ...+|.+++||.++.||++++++||+++|+++||||||++++||++.+ +++++|||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~Tvf 238 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFH-DRKLVTIF 238 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEec-CCcEEEEE
Confidence 9999988888999999999996 578999999999999999999999999999999999999999999988 99999999
Q ss_pred cCCCcccCCCCceEEEEEcCCCceEEEEeecc
Q 023464 234 SAPNYCYRCGNVASILSFNENMEREVKFFTET 265 (282)
Q Consensus 234 Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 265 (282)
|||+||+..+|+||++.++++.++++.+|+|.
T Consensus 239 Sa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 239 SAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999998899999999999999999999864
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-64 Score=431.73 Aligned_cols=280 Identities=54% Similarity=1.040 Sum_probs=269.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeeccccc
Q 023464 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (282)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 81 (282)
++++.|+++.+..++++.++..+|+.|+++|++|.++..+..|++|+||+||||++|.++++..|..++..|+|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhh---------------------hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEecC
Q 023464 82 RGYNSLEVFTILLLLK---------------------VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 140 (282)
Q Consensus 82 rG~~s~evl~~l~~lk---------------------~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHg 140 (282)
||++|.|++.+|.++| +|||++||+++||+..+|..|.+.|+++|+.|.|+++++|+||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 9999999999999999 5677778999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccce
Q 023464 141 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 220 (282)
Q Consensus 141 Gi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 220 (282)
|++|++.+++.++.+.|.+++|.+++++|+|||||.++-+|..++||.++.||.+..++|..++|++++-|.||.+.+||
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~ 258 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGY 258 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCCCCCCCCCCCCCCCC
Q 023464 221 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 282 (282)
Q Consensus 221 ~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (282)
.+.+ ...++|+||||+|||.++|.+|++.+++.....|.||+|+|...---..|..++|||
T Consensus 259 nW~~-~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 259 NWYH-LWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred ceee-ecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9988 888889999999999999999999999999999999999987743366799999997
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=4.5e-61 Score=439.95 Aligned_cols=251 Identities=35% Similarity=0.660 Sum_probs=228.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCC--------CceeeecccccCCC
Q 023464 13 GQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPE--------TNYIFMGDFVDRGY 84 (282)
Q Consensus 13 ~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~--------~~~vfLGD~vDrG~ 84 (282)
...++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++. .+||||||||||||
T Consensus 18 ~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp 97 (311)
T cd07419 18 RFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGS 97 (311)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCC
Confidence 4568999999999999999999999999999999999999999999999999988754 57999999999999
Q ss_pred ChHHHHHHHHHhh---------hcCchhH------------HHhhcCC-----ccccccccchhcccceEEEEeCcEEEe
Q 023464 85 NSLEVFTILLLLK---------VYGFYDE------------CQRKYGN-----ANAWRYCTDVFDYLTLSAIIDGTVLCV 138 (282)
Q Consensus 85 ~s~evl~~l~~lk---------~~G~~ee------------~~~~~~~-----~~~~~~~~~~f~~LPl~~~i~~~~l~v 138 (282)
+|+||+.+|++++ ++||||. +..+|+. ...|..++++|++||++++++++++||
T Consensus 98 ~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~v 177 (311)
T cd07419 98 NSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCM 177 (311)
T ss_pred ChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEE
Confidence 9999999999998 7899985 4445543 258889999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHhhhccc-cCCCCCCccccccCCCCC---CCCcccCC---CCCe--eeeChhhHHHHHHhcCCcEE
Q 023464 139 HGGLSPDIRTIDQIRVIERNC-EIPHEGPFCDLMWSDPED---IETWAVSP---RGAG--WLFGSRVTSEFNHINNLDLV 209 (282)
Q Consensus 139 HgGi~~~~~~l~~i~~i~r~~-~~~~~~~~~~llWsdp~~---~~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~i 209 (282)
|||++|...++++++.+.|+. ..+..+.+.+++||||.+ ..+|.+++ ||.| +.||++++++||+++|+++|
T Consensus 178 HgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~i 257 (311)
T cd07419 178 HGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMI 257 (311)
T ss_pred ccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEE
Confidence 999999999999999999986 445567889999999984 35677665 9988 68999999999999999999
Q ss_pred EecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeec
Q 023464 210 CRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 264 (282)
Q Consensus 210 IrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 264 (282)
|||||++++||++.+ +++++||||||+||+..+|.||++.|+++.++++++++|
T Consensus 258 iRgHe~~~~G~~~~~-~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 258 IRAHECVMDGFERFA-QGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEechhhhCCeEEeC-CCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999988 999999999999999889999999999999999999987
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=5.1e-60 Score=438.23 Aligned_cols=263 Identities=32% Similarity=0.541 Sum_probs=232.1
Q ss_pred HHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCeeeec----CCcceeecCCCCHHHHHHHHHhCCCC
Q 023464 3 LDQWIAKVKEG----------QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68 (282)
Q Consensus 3 ~~~~~~~~~~~----------~~~~~~~~~~l~~~a~~il~~ep~l~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~ 68 (282)
++.|++.+... ..++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 56788888655 45899999999999999999999999997 79999999999999999999999988
Q ss_pred CC-CceeeecccccCCCChHHHHHHHHHhh---------hcCchh------------HHHhhcCC--ccccccccchhcc
Q 023464 69 PE-TNYIFMGDFVDRGYNSLEVFTILLLLK---------VYGFYD------------ECQRKYGN--ANAWRYCTDVFDY 124 (282)
Q Consensus 69 ~~-~~~vfLGD~vDrG~~s~evl~~l~~lk---------~~G~~e------------e~~~~~~~--~~~~~~~~~~f~~ 124 (282)
+. ++|||||||||||++|+||+.+|+++| ++|||| |+..+|+. ..+|+.+.++|++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 65 569999999999999999999999998 678886 46667764 3689999999999
Q ss_pred cceEEEEeCcEEEecCCCC---------------------------CCCCCHHHHHhhhcc-ccCCCCC---CccccccC
Q 023464 125 LTLSAIIDGTVLCVHGGLS---------------------------PDIRTIDQIRVIERN-CEIPHEG---PFCDLMWS 173 (282)
Q Consensus 125 LPl~~~i~~~~l~vHgGi~---------------------------~~~~~l~~i~~i~r~-~~~~~~~---~~~~llWs 173 (282)
||++++++++++||||||+ |.+.++++|+.++|+ .+.+..+ ++.|+|||
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWS 251 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWS 251 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEee
Confidence 9999999999999999994 445689999999997 4555544 36899999
Q ss_pred CCCCCCCcccC-CCCCeeeeChhhHHHHHHhcCCcEEEecccc------------cccceEEEecC---CeEEEEecCCC
Q 023464 174 DPEDIETWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRAHQL------------VQEGLKYMFQD---KGLVTVWSAPN 237 (282)
Q Consensus 174 dp~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~------------~~~G~~~~~~~---~~~itifSa~~ 237 (282)
||....+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.+ + ++++||||||+
T Consensus 252 DP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~-~~~~~~liTvFSa~n 330 (377)
T cd07418 252 DPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH-DVESGKLITLFSAPD 330 (377)
T ss_pred CCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec-cCCCCcEEEEecCCc
Confidence 99977788776 7999999999999999999999999999996 679999977 6 99999999999
Q ss_pred cc------cCCCCceEEEEEcCC--CceEEEEeeccC
Q 023464 238 YC------YRCGNVASILSFNEN--MEREVKFFTETE 266 (282)
Q Consensus 238 y~------~~~~n~~avl~i~~~--~~~~~~~~~~~~ 266 (282)
|| +.++|+||++.++.+ ...+|++|++..
T Consensus 331 Y~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~ 367 (377)
T cd07418 331 YPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVK 367 (377)
T ss_pred cccccccccccCcceEEEEEecCCCCCccceEeeccC
Confidence 99 568999999999764 479999999983
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.2e-58 Score=414.25 Aligned_cols=263 Identities=40% Similarity=0.695 Sum_probs=243.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccC
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDR 82 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDr 82 (282)
.+-+-+++.+..+++++..+.|+.+++.+|++|++++++++||.|+|||||+|.||+++|+..|.|.+.+|+||||||||
T Consensus 48 ~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDR 127 (517)
T KOG0375|consen 48 HDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 127 (517)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhh---------hcCchh------------HHHhhcCCccccccccchhcccceEEEEeCcEEEecCC
Q 023464 83 GYNSLEVFTILLLLK---------VYGFYD------------ECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGG 141 (282)
Q Consensus 83 G~~s~evl~~l~~lk---------~~G~~e------------e~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHgG 141 (282)
|.+|+||+.+|.+|| ++|||| ||..+| +..+|+++.+.|+.||+||+.++.++|||||
T Consensus 128 GyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGG 206 (517)
T KOG0375|consen 128 GYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGG 206 (517)
T ss_pred ceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCC
Confidence 999999999999999 789996 588888 6789999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-------CCCcc-cCCCCCeeeeChhhHHHHHHhcCCcEEEecc
Q 023464 142 LSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-------IETWA-VSPRGAGWLFGSRVTSEFNHINNLDLVCRAH 213 (282)
Q Consensus 142 i~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~-------~~~~~-~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH 213 (282)
+||.+.++++|++|+|..++|..++.+|+|||||.+ .+-|. .+-||++|.|...|+.+||+.||+--|||+|
T Consensus 207 lSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAH 286 (517)
T KOG0375|consen 207 LSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAH 286 (517)
T ss_pred CCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhh
Confidence 999999999999999999999999999999999972 23343 3479999999999999999999999999999
Q ss_pred cccccceEEEecCC------eEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCC
Q 023464 214 QLVQEGLKYMFQDK------GLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 268 (282)
Q Consensus 214 ~~~~~G~~~~~~~~------~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 268 (282)
+.++.||+..- +. -+|||||||||-+.++|+||||.. ++..+.++||.++|++
T Consensus 287 EAQDaGYRMYr-ksqttGFPSLiTiFSAPNYLDvYnNKAAvLKY-EnNVMNIRQFncSPHP 345 (517)
T KOG0375|consen 287 EAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhh-cccccCCchheeeecCCchhhhhccHHHHhhh-hcccceeeccCCCCCC
Confidence 99999997633 33 489999999999999999999985 4788999999999987
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-49 Score=359.22 Aligned_cols=265 Identities=30% Similarity=0.552 Sum_probs=229.6
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeec----CCcceeecCCCCHHHHHHHHHhCCCCCC-Cceeee
Q 023464 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFM 76 (282)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~~-~~~vfL 76 (282)
+|+.+++.|+..+++++..++.++.+|+++|++-|++-+++ ..+.|+||+||.++||.-+|-+.|+|.. ..|||.
T Consensus 120 ~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFN 199 (631)
T KOG0377|consen 120 HIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFN 199 (631)
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeec
Confidence 48899999999999999999999999999999999998874 4699999999999999999999999975 679999
Q ss_pred cccccCCCChHHHHHHHHHhh---------hcCchhH--HHhhcC----------C--ccccccccchhcccceEEEEeC
Q 023464 77 GDFVDRGYNSLEVFTILLLLK---------VYGFYDE--CQRKYG----------N--ANAWRYCTDVFDYLTLSAIIDG 133 (282)
Q Consensus 77 GD~vDrG~~s~evl~~l~~lk---------~~G~~ee--~~~~~~----------~--~~~~~~~~~~f~~LPl~~~i~~ 133 (282)
||+||||.+|+|+|.+|+++- .+||||. +..+|| . ..+...+.++|+|||++.++++
T Consensus 200 GDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~ 279 (631)
T KOG0377|consen 200 GDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDS 279 (631)
T ss_pred CchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhccc
Confidence 999999999999999999998 5788876 234444 2 2455677899999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHHhhhccc-----cCCC-----------------CCCccccccCCCCCCCCcccC-CCCCee
Q 023464 134 TVLCVHGGLSPDIRTIDQIRVIERNC-----EIPH-----------------EGPFCDLMWSDPEDIETWAVS-PRGAGW 190 (282)
Q Consensus 134 ~~l~vHgGi~~~~~~l~~i~~i~r~~-----~~~~-----------------~~~~~~llWsdp~~~~~~~~~-~rg~~~ 190 (282)
+++++|||+|.. .+++-+.+|+|.. -+|. ...+.|+|||||....|..+| -||.|.
T Consensus 280 ~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~ 358 (631)
T KOG0377|consen 280 RILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGC 358 (631)
T ss_pred ceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcc
Confidence 999999999875 3466666666541 1111 013678999999976665555 799999
Q ss_pred eeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEEeeccCCC
Q 023464 191 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 268 (282)
Q Consensus 191 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 268 (282)
+||++.+++||++++++++||+|+|-++||++.+ |++|+|||||+||.....|+||.+.+.......|+||.+...+
T Consensus 359 yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H-d~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 359 YFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH-DNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQT 435 (631)
T ss_pred eeCchHHHHHHHHhCceeeeeecccCCCcceeee-CCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhh
Confidence 9999999999999999999999999999999999 9999999999999887899999999999999999999977655
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.8e-42 Score=322.58 Aligned_cols=271 Identities=34% Similarity=0.602 Sum_probs=240.8
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecC----CcceeecCCCCHHHHHHHHHhCCCCCC-Cceeeecc
Q 023464 4 DQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMGD 78 (282)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~----~i~vvGDiHG~~~~l~~il~~~~~~~~-~~~vfLGD 78 (282)
..+++.+.++..++..-+-.|+..+..+++++|++++++. .+.|+||+||++.++.+++...|.++. ..|+|.||
T Consensus 171 k~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngd 250 (476)
T KOG0376|consen 171 KTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGD 250 (476)
T ss_pred HHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCc
Confidence 4455666778888888999999999999999999998864 499999999999999999999998865 78999999
Q ss_pred cccCCCChHHHHHHHHHhh---------hcCchhH--HHhhcC---------CccccccccchhcccceEEEEeCcEEEe
Q 023464 79 FVDRGYNSLEVFTILLLLK---------VYGFYDE--CQRKYG---------NANAWRYCTDVFDYLTLSAIIDGTVLCV 138 (282)
Q Consensus 79 ~vDrG~~s~evl~~l~~lk---------~~G~~ee--~~~~~~---------~~~~~~~~~~~f~~LPl~~~i~~~~l~v 138 (282)
++|||..|.|+...+...| .+||||. +...|| ....+..+.+.|.+||++..++++++.+
T Consensus 251 fv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~ 330 (476)
T KOG0376|consen 251 FVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVM 330 (476)
T ss_pred eeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEE
Confidence 9999999999999999988 5677753 333343 2345556669999999999999999999
Q ss_pred cCCCC-CCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccc
Q 023464 139 HGGLS-PDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ 217 (282)
Q Consensus 139 HgGi~-~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~ 217 (282)
|||+. +.-..++++++|.|+...+.++..++++||||....+..++.||.|..||.++++.||+.++++.|||||+..+
T Consensus 331 hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d 410 (476)
T KOG0376|consen 331 HGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKD 410 (476)
T ss_pred ecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCC
Confidence 99985 44567999999999988889999999999999988999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeEEEEecCCCcccCCCCceEEEEEc-CCCceEEEEeeccCCC--CCCCCCC
Q 023464 218 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN-ENMEREVKFFTETEEN--NQMRGPR 275 (282)
Q Consensus 218 ~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~--~~~~~~~ 275 (282)
.||+..+ +|+|+||||||+||+..+|.||++.++ ++....+++|+|.|+. .+|+..+
T Consensus 411 ~gy~~eh-~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma~~n 470 (476)
T KOG0376|consen 411 EGYEVEH-SGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMAYAN 470 (476)
T ss_pred Cceeeec-CCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCccccc
Confidence 9999999 999999999999999999999999999 6889999999999988 3565544
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.98 E-value=1.5e-31 Score=233.84 Aligned_cols=194 Identities=41% Similarity=0.679 Sum_probs=155.4
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh--------hcCchhHHHhhcC-------
Q 023464 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK--------VYGFYDECQRKYG------- 110 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk--------~~G~~ee~~~~~~------- 110 (282)
+|||||||++++|.++++..+..+.+++||||||||||+++.+++.++..++ ++||||.....+.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~~~~~~~l~GNHe~~~~~~~~~~~~~~ 80 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKILPDNVILLRGNHEDMLLNFLYGFYDED 80 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCCCCcEEEEccCchhhhhhhhcCCcchh
Confidence 5899999999999999999998888999999999999999999999999983 8899998432221
Q ss_pred -------------CccccccccchhcccceEEEEeC-cEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCC
Q 023464 111 -------------NANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE 176 (282)
Q Consensus 111 -------------~~~~~~~~~~~f~~LPl~~~i~~-~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~ 176 (282)
....+..+.+++..||+++.++. +++|||||++|.....++.. ..+.+....+++|+||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~~ 154 (225)
T cd00144 81 EWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDPL 154 (225)
T ss_pred hccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCCC
Confidence 11233456788999999998887 89999999999876554443 23344567899999987
Q ss_pred CCCCc-ccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEE
Q 023464 177 DIETW-AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILS 250 (282)
Q Consensus 177 ~~~~~-~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~ 250 (282)
....+ ..+.++. ++++.+.++..++.+.||+||+++..|+.... ++++++|+|++.|++..+|..+++.
T Consensus 155 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~-~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 155 ELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGH-DGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcC-CCCEEEEecCCcccCCCCccEEEEe
Confidence 43322 2223333 89999999999999999999999999886545 8899999999999876677777654
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.92 E-value=8.1e-25 Score=194.63 Aligned_cols=179 Identities=21% Similarity=0.288 Sum_probs=120.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC---------CCCceeeecccccCCCChHHHHHHHHHhh-------hcCchhHHH
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV---------PETNYIFMGDFVDRGYNSLEVFTILLLLK-------VYGFYDECQ 106 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~lk-------~~G~~ee~~ 106 (282)
++++||||||||++.|.++|+++++. ..+++|||||||||||+|.+|+.+++++. ++||||...
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~~~~~~~l~GNHE~~~ 80 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVEKKAAYYVPGNHCNKL 80 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhhCCCEEEEeCccHHHH
Confidence 46899999999999999999998874 45789999999999999999999999885 899999743
Q ss_pred hhc-CC------------------------ccccccccchhcccceEEEEe-CcEEEecCCCCCCCCCHHHHHhhhcccc
Q 023464 107 RKY-GN------------------------ANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIRTIDQIRVIERNCE 160 (282)
Q Consensus 107 ~~~-~~------------------------~~~~~~~~~~f~~LPl~~~i~-~~~l~vHgGi~~~~~~l~~i~~i~r~~~ 160 (282)
..+ .. ..+++.+.++++.+|++..+. ++++|||||+.|....... ..
T Consensus 81 l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~-~~------ 153 (245)
T PRK13625 81 YRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQD-KK------ 153 (245)
T ss_pred HHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccch-hh------
Confidence 221 10 012345677889999997764 5799999999886311000 00
Q ss_pred CCCCCCccccccCC--------CCC-CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEE
Q 023464 161 IPHEGPFCDLMWSD--------PED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVT 231 (282)
Q Consensus 161 ~~~~~~~~~llWsd--------p~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~it 231 (282)
....++|++ +.. +..|..+. .+.+.+|.||+++.... . .+..+.
T Consensus 154 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~---~-~~~~i~ 206 (245)
T PRK13625 154 -----VQTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPR---F-VNHTVN 206 (245)
T ss_pred -----hhhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccce---e-cCCeEE
Confidence 112334442 110 12232222 23467999999986533 2 344677
Q ss_pred EecCCCcccCCCCceEEEEEcCCCceEE
Q 023464 232 VWSAPNYCYRCGNVASILSFNENMEREV 259 (282)
Q Consensus 232 ifSa~~y~~~~~n~~avl~i~~~~~~~~ 259 (282)
|.++.- +++..+++.+.+...+++
T Consensus 207 IDtGa~----~gG~Ltal~l~~~~~~~v 230 (245)
T PRK13625 207 IDTGCV----FGGRLTALRYPEMETVSV 230 (245)
T ss_pred EECcCc----cCCEEEEEECCCCcEEEE
Confidence 877753 356778888876543333
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.90 E-value=1.4e-23 Score=182.42 Aligned_cols=157 Identities=17% Similarity=0.258 Sum_probs=116.1
Q ss_pred ceeecCCCCHHHHHHHHHhCCCC--------CCCceeeecccccCCCChHHHHHHHHHhh------------hcCchhHH
Q 023464 46 TVCGDIHGQFHDLMKLFQTGGHV--------PETNYIFMGDFVDRGYNSLEVFTILLLLK------------VYGFYDEC 105 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk------------~~G~~ee~ 105 (282)
+||||||||+++|+++|+.+++. +.+.+|++||+|||||++.+|+.+|++|+ +.||||..
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998752 46899999999999999999999999985 88999974
Q ss_pred Hhh----cCCcc--------------cc---ccccchhcccceEEEEeCcEEEecCCCCCCCCCHHHHHhhhccccCCCC
Q 023464 106 QRK----YGNAN--------------AW---RYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHE 164 (282)
Q Consensus 106 ~~~----~~~~~--------------~~---~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~ 164 (282)
... +.... .+ ..+.++++.+|+...++ ++++||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH-------------------
Confidence 321 11110 11 12367889999998765 588899999442
Q ss_pred CCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCC
Q 023464 165 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPN 237 (282)
Q Consensus 165 ~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~ 237 (282)
|++.- ..+.. ....+...++++++.++.+++|+|||+++.|....+ +|++++|.++.+
T Consensus 141 -------w~r~y----~~~~~---~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~-~g~~i~ID~g~~ 198 (208)
T cd07425 141 -------WYRGY----SKETS---DKECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFC-GGKVIRIDVGMS 198 (208)
T ss_pred -------HhhHh----hhhhh---hccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEE-CCEEEEEeCCcc
Confidence 32100 00000 000112467889999999999999999998886446 999999988643
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.90 E-value=2.3e-23 Score=184.11 Aligned_cols=184 Identities=21% Similarity=0.369 Sum_probs=118.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCC----------CCceeeecccccCCCChHHHHHHHHHhh-------hcCchhHH
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVP----------ETNYIFMGDFVDRGYNSLEVFTILLLLK-------VYGFYDEC 105 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~lk-------~~G~~ee~ 105 (282)
+|+.||||||||+.+|+++|+++++.+ .+++|||||||||||+|.||+.+|.+++ ++||||..
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhCCcEEEEECCcHHH
Confidence 479999999999999999999997653 4689999999999999999999999884 89999985
Q ss_pred Hhhc----------CCc-----------cccccccchhcccceEEEEe-CcEEEecCCCCCCCCCHHHHHhhhccccCCC
Q 023464 106 QRKY----------GNA-----------NAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIRTIDQIRVIERNCEIPH 163 (282)
Q Consensus 106 ~~~~----------~~~-----------~~~~~~~~~f~~LPl~~~i~-~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~ 163 (282)
...+ +.. ..++...++++.||+...++ ++++|||||+++.+.....
T Consensus 81 l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~------------ 148 (234)
T cd07423 81 LYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS------------ 148 (234)
T ss_pred HHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc------------
Confidence 3221 101 12234567889999987765 4799999998874321100
Q ss_pred CCCccccccCCCCC-CCCcccCCCCCeeeeChhhHHHHH-HhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccC
Q 023464 164 EGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFN-HINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYR 241 (282)
Q Consensus 164 ~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl-~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~ 241 (282)
.......+|.+... .... +. ..-..+. ...+.+.+|.||++++... . . ++ .+.|.+.+-|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~vv~GHt~~~~~~-~-~-~~-~i~IDtGav~--- 210 (234)
T cd07423 149 KRVRSFALYGDTTGETDEF-----GL------PVRRDWAKEYRGDALVVYGHTPVPEPR-W-L-NN-TINIDTGCVF--- 210 (234)
T ss_pred hhheeeeecccccCCcCCC-----CC------ccchhhHhhCCCCeEEEECCCCCccce-E-e-CC-EEEEECCCCC---
Confidence 00112234443210 0000 00 0000111 1235678999999987543 2 2 44 4666666433
Q ss_pred CCCceEEEEEcCCCce
Q 023464 242 CGNVASILSFNENMER 257 (282)
Q Consensus 242 ~~n~~avl~i~~~~~~ 257 (282)
++..+++.+++...+
T Consensus 211 -gG~Lt~l~~~~~~~~ 225 (234)
T cd07423 211 -GGKLTALRYPEREIV 225 (234)
T ss_pred -CCcceEEECCCCcEE
Confidence 456677777654433
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.89 E-value=1.3e-22 Score=182.88 Aligned_cols=195 Identities=19% Similarity=0.276 Sum_probs=128.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhh--cCCc--
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRK--YGNA-- 112 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~--~~~~-- 112 (282)
++++||||||||+..|+++|+++++. ..+.+|||||+|||||+|.+|+.++.++. +.||||..... ++..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~~~~~~VlGNHD~~ll~~~~g~~~~ 80 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLGDSAVTVLGNHDLHLLAVAAGIKRN 80 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcCCCeEEEecChhHHHHHhhcCCccc
Confidence 46899999999999999999999875 46899999999999999999999999985 89999984322 2210
Q ss_pred ------------cccccccchhcccceEEEE-eCcEEEecCCCCCCCCCHHHHHhhhccc----cCCCC-CCccccccCC
Q 023464 113 ------------NAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIRTIDQIRVIERNC----EIPHE-GPFCDLMWSD 174 (282)
Q Consensus 113 ------------~~~~~~~~~f~~LPl~~~i-~~~~l~vHgGi~~~~~~l~~i~~i~r~~----~~~~~-~~~~~llWsd 174 (282)
...+...++++.+|+...+ .+++++||||++|.+. +++.....+.. ..+.. ..+..+.|+.
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~-~~~~~~~a~eve~~l~~~~~~~~~~~my~~~ 159 (275)
T PRK00166 81 KKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD-LATALALAREVEAVLRSDDYRDFLANMYGNE 159 (275)
T ss_pred cchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC-HHHHHHHHHHHHHHhcCCcHHHHHHHhcCCC
Confidence 1113356788999998765 5689999999999884 33333222221 11111 1223333333
Q ss_pred CCCCCCcccCCCCCe-------------------------------------eeeChhhHHHHHHhcCCcEEEecccccc
Q 023464 175 PEDIETWAVSPRGAG-------------------------------------WLFGSRVTSEFNHINNLDLVCRAHQLVQ 217 (282)
Q Consensus 175 p~~~~~~~~~~rg~~-------------------------------------~~fg~~~~~~fl~~~~~~~iIrgH~~~~ 217 (282)
|. .|.++-.|.. ..|.... +...-..||-||....
T Consensus 160 p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~-----~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 160 PD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPG-----RKTRDYTIVFGHWAAL 231 (275)
T ss_pred cC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcC-----ccCCCCeEEEecCccc
Confidence 32 2222221110 0111110 0122347999999987
Q ss_pred cceEEEecCCeEEEEecCCCcccCCCCceEEEEEcC
Q 023464 218 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE 253 (282)
Q Consensus 218 ~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~ 253 (282)
.|... ...++.+.|+ | ..++..++++++.
T Consensus 232 ~G~~~---~~~~~~LDtG---c-vwgg~Lta~~l~~ 260 (275)
T PRK00166 232 EGLTT---PPNIIALDTG---C-VWGGKLTALRLED 260 (275)
T ss_pred CCccC---CCCeEEeecc---c-ccCCeEEEEEeCC
Confidence 78855 6778999888 3 2467888899973
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.89 E-value=1.3e-22 Score=177.92 Aligned_cols=97 Identities=28% Similarity=0.409 Sum_probs=79.0
Q ss_pred ceeecCCCCHHHHHHHHHhCCCC--------CCCceeeecccccCCCChHHHHHHHHHhh-------hcCchhHHHhhcC
Q 023464 46 TVCGDIHGQFHDLMKLFQTGGHV--------PETNYIFMGDFVDRGYNSLEVFTILLLLK-------VYGFYDECQRKYG 110 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk-------~~G~~ee~~~~~~ 110 (282)
+||||||||++.|+++|+++++. +.+++|||||||||||+|.+|+.++.+++ +.||||+....+-
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~~~~~~l~GNHE~~ll~~~ 81 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDAGHALAVMGNHEFNAIAWH 81 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcCCCEEEEEccCcHHHHHhh
Confidence 69999999999999999998765 46799999999999999999999999986 8899998543221
Q ss_pred -------------Cc-----------------cccccccchhcccceEEEEeCcEEEecCCCC
Q 023464 111 -------------NA-----------------NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLS 143 (282)
Q Consensus 111 -------------~~-----------------~~~~~~~~~f~~LPl~~~i~~~~l~vHgGi~ 143 (282)
.. +.+....++++.||+.... ++++|||||+.
T Consensus 82 ~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 82 TKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 00 0123456788999999764 57999999985
No 25
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.88 E-value=4.4e-22 Score=174.14 Aligned_cols=172 Identities=19% Similarity=0.259 Sum_probs=113.4
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh---hcCchhHHHhhcC-Cc-----
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK---VYGFYDECQRKYG-NA----- 112 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk---~~G~~ee~~~~~~-~~----- 112 (282)
++++||||||||+.+|+++|+.+++. ..++++||||+|||||+|.+|+.+|.+.. +.||||+....+- ..
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~~~~~v~GNHE~~~l~~~~~~~~~~w 96 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEHWVRAVRGNHEQMALDALASQQMSLW 96 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcCCceEeeCchHHHHHHHHHCCccchh
Confidence 48999999999999999999999876 56899999999999999999999998765 8999998543221 00
Q ss_pred ----------------cccccccchhcccceEEEEe---CcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccC
Q 023464 113 ----------------NAWRYCTDVFDYLTLSAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWS 173 (282)
Q Consensus 113 ----------------~~~~~~~~~f~~LPl~~~i~---~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWs 173 (282)
+.+....++++.||+...+. +++++||||++.... +.. .+ ....+++|+
T Consensus 97 ~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~--~~~----~~------~~~~~~~w~ 164 (218)
T PRK11439 97 LMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY--EWQ----KD------VDLHQVLWS 164 (218)
T ss_pred hhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch--hhh----cc------CCccceEEc
Confidence 01122336788999987653 469999999843221 100 00 023457898
Q ss_pred CCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEE
Q 023464 174 DPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSF 251 (282)
Q Consensus 174 dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i 251 (282)
++.....+ . +. ...+.+.+|.|||+++.-.. . ++ .+.|.+.+-| ++..+++.+
T Consensus 165 r~~~~~~~---~-~~-------------~~~~~~~vv~GHT~~~~~~~--~-~~-~i~IDtGav~----gg~Lt~l~~ 217 (218)
T PRK11439 165 RSRLGERQ---K-GQ-------------GITGADHFWFGHTPLRHRVD--I-GN-LHYIDTGAVF----GGELTLVQL 217 (218)
T ss_pred Chhhhhcc---c-cc-------------cccCCCEEEECCccCCCccc--c-CC-EEEEECCCCC----CCeeEEEEc
Confidence 63211100 0 00 12255789999999875432 2 33 5666666544 445555543
No 26
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.87 E-value=1.2e-21 Score=174.91 Aligned_cols=112 Identities=26% Similarity=0.326 Sum_probs=89.8
Q ss_pred cceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhh--cCCc----
Q 023464 45 VTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRK--YGNA---- 112 (282)
Q Consensus 45 i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~--~~~~---- 112 (282)
++||||||||+++|+++|+++++. ..+++||+||||||||+|+||+.++.+++ +.||||..... ++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~~~v~~VlGNHD~~ll~~~~g~~~~~~ 80 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLGDSAKTVLGNHDLHLLAVAAGIKKPKK 80 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcCCCeEEEcCCchHHHHHHhcCcccccc
Confidence 589999999999999999999876 46899999999999999999999999986 99999985322 2210
Q ss_pred ----------cccccccchhcccceEEEEeC-cEEEecCCCCCCCCCHHHHHhhhc
Q 023464 113 ----------NAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIRTIDQIRVIER 157 (282)
Q Consensus 113 ----------~~~~~~~~~f~~LPl~~~i~~-~~l~vHgGi~~~~~~l~~i~~i~r 157 (282)
.......++++.+|+...+++ ++++||||++|.|. +++...+.+
T Consensus 81 ~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~-~~~~~~~a~ 135 (257)
T cd07422 81 KDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS-IEQALKLAR 135 (257)
T ss_pred HhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC-HHHHHHHHH
Confidence 111345678889999987764 79999999999984 555444443
No 27
>PHA02239 putative protein phosphatase
Probab=99.85 E-value=5.4e-21 Score=168.85 Aligned_cols=155 Identities=21% Similarity=0.336 Sum_probs=108.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC--CCCceeeecccccCCCChHHHHHHHHHhh--------hcCchhHHHh-----
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSLEVFTILLLLK--------VYGFYDECQR----- 107 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk--------~~G~~ee~~~----- 107 (282)
+++++||||||++..|.++++.+... +.+.+||+|||||||++|.+++..++.+. +.||||+...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMSNDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhhcCCCeEEEECCcHHHHHHHHhC
Confidence 46899999999999999999987533 46889999999999999999999998874 7899998421
Q ss_pred ---------------------hcCCcc------------------------------ccccccchhcccceEEEEeCcEE
Q 023464 108 ---------------------KYGNAN------------------------------AWRYCTDVFDYLTLSAIIDGTVL 136 (282)
Q Consensus 108 ---------------------~~~~~~------------------------------~~~~~~~~f~~LPl~~~i~~~~l 136 (282)
.||-.. .+..+.++++.||+... .++++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCEE
Confidence 121000 01122346778999866 45799
Q ss_pred EecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEeccccc
Q 023464 137 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 216 (282)
Q Consensus 137 ~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 216 (282)
|||||+.|... +++ ....+++|.+. | .++.. =+.||.|||++
T Consensus 160 fVHAGi~p~~~-~~~-------------q~~~~llWiR~-----f--~~~~~-----------------g~~vV~GHTp~ 201 (235)
T PHA02239 160 FSHSGGVSWKP-VEE-------------QTIDQLIWSRD-----F--QPRKD-----------------GFTYVCGHTPT 201 (235)
T ss_pred EEeCCCCCCCC-hhh-------------CCHhHeEEecc-----c--CCCCC-----------------CcEEEECCCCC
Confidence 99999988744 222 12368899973 2 11111 25789999998
Q ss_pred ccceEEEecCCeEEEEecCCCc
Q 023464 217 QEGLKYMFQDKGLVTVWSAPNY 238 (282)
Q Consensus 217 ~~G~~~~~~~~~~itifSa~~y 238 (282)
..+.... .++.|.|.++.-|
T Consensus 202 ~~~~~~~--~~~~I~IDtGa~~ 221 (235)
T PHA02239 202 DSGEVEI--NGDMLMCDVGAVF 221 (235)
T ss_pred CCCcccc--cCCEEEeecCccc
Confidence 7655442 3445778776543
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.85 E-value=1.6e-20 Score=162.89 Aligned_cols=165 Identities=24% Similarity=0.308 Sum_probs=109.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh---hcCchhHHHhhc--CC---cc
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK---VYGFYDECQRKY--GN---AN 113 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk---~~G~~ee~~~~~--~~---~~ 113 (282)
++++|||||||++.+|+++++..+.. ..+.++++||+||||+++.|++.+|.... +.||||...... +. ..
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~~~~~~v~GNhe~~~~~~~~~~~~~~~ 80 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLEPWFHAVRGNHEQMAIDALRAEPLDAV 80 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhcCCEEEeECCChHHHHhHhhCCCcchh
Confidence 47899999999999999999998865 46889999999999999999999998754 889999743221 10 00
Q ss_pred -----------------ccccccchhcccceEEEEe---CcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccC
Q 023464 114 -----------------AWRYCTDVFDYLTLSAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWS 173 (282)
Q Consensus 114 -----------------~~~~~~~~f~~LPl~~~i~---~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWs 173 (282)
.++...++++.||+...+. .++++||||+++... ...+. + +........+++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~~~~~w~ 154 (207)
T cd07424 81 RWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDIEELLWS 154 (207)
T ss_pred HHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccceeeeec
Confidence 1223556899999998765 369999999866431 11000 0 11122345678898
Q ss_pred CCCCCCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecC
Q 023464 174 DPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSA 235 (282)
Q Consensus 174 dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa 235 (282)
+|...... +...-+.+.||.||++.+..+.. +++ +-|...
T Consensus 155 ~~~~~~~~------------------~~~~~~~~~iV~GHTh~~~~~~~---~~~-i~ID~G 194 (207)
T cd07424 155 RTRIQKAQ------------------TQPIKGVDAVVHGHTPVKRPLRL---GNV-LYIDTG 194 (207)
T ss_pred cchhhhcC------------------ccccCCCCEEEECCCCCCcceEE---CCE-EEEECC
Confidence 65311100 00111457899999998764433 444 444444
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.85 E-value=2.3e-21 Score=173.73 Aligned_cols=113 Identities=22% Similarity=0.277 Sum_probs=90.0
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhhc--CC---
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRKY--GN--- 111 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~~--~~--- 111 (282)
++++||||||||+++|+++|+++++. ..++++|+||+|||||+|+||+.++.+++ +.||||...-.+ |.
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~~~~~~VlGNHD~~lL~~~~g~~~~ 80 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLGDAVRLVLGNHDLHLLAVFAGISRN 80 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCCeEEEEChhHHHHHHHhcCCCcc
Confidence 46899999999999999999999876 46899999999999999999999999987 899999843221 21
Q ss_pred -----------ccccccccchhcccceEEEEe-CcEEEecCCCCCCCCCHHHHHhhh
Q 023464 112 -----------ANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIRTIDQIRVIE 156 (282)
Q Consensus 112 -----------~~~~~~~~~~f~~LPl~~~i~-~~~l~vHgGi~~~~~~l~~i~~i~ 156 (282)
....+...++++.+|+..... .++++||||++|.+. +++...+.
T Consensus 81 ~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~-l~~a~~~a 136 (279)
T TIGR00668 81 KPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD-LQTAKECA 136 (279)
T ss_pred CchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc-HHHHHHHH
Confidence 012245668888999996554 369999999999985 55554443
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.84 E-value=2e-20 Score=168.12 Aligned_cols=62 Identities=32% Similarity=0.490 Sum_probs=53.6
Q ss_pred CcceeecCCCCHHHHHHHHHhCCCC------CCCceeeecccccCCCChHHHHHHHHHhh----------hcCchhHH
Q 023464 44 PVTVCGDIHGQFHDLMKLFQTGGHV------PETNYIFMGDFVDRGYNSLEVFTILLLLK----------VYGFYDEC 105 (282)
Q Consensus 44 ~i~vvGDiHG~~~~l~~il~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~lk----------~~G~~ee~ 105 (282)
++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+.+|.+++ +.||||++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHH
Confidence 6899999999999999999865421 24579999999999999999999999974 67999963
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.82 E-value=9.7e-20 Score=159.33 Aligned_cols=102 Identities=25% Similarity=0.250 Sum_probs=79.6
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh---hcCchhHHHhhcCC---cc--
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK---VYGFYDECQRKYGN---AN-- 113 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk---~~G~~ee~~~~~~~---~~-- 113 (282)
.|++||||||||+.+|+++|+...+. ..+.++||||+|||||+|.+|+.+|.+.. ++||||+....+-. ..
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~~~~~~v~GNHE~~~~~~~~~~~~~~~ 94 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQPWFISVKGNHEAMALDAFETGDGNMW 94 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhhCCcEEEECchHHHHHHHHhcCChhHH
Confidence 48999999999999999999998755 45899999999999999999999997755 99999985433211 01
Q ss_pred -----cc------------ccccchhcccceEEEEe---CcEEEecCCCCC
Q 023464 114 -----AW------------RYCTDVFDYLTLSAIID---GTVLCVHGGLSP 144 (282)
Q Consensus 114 -----~~------------~~~~~~f~~LPl~~~i~---~~~l~vHgGi~~ 144 (282)
.| .....+++.||+...+. .++++||||++.
T Consensus 95 ~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~ 145 (218)
T PRK09968 95 LASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPG 145 (218)
T ss_pred HHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCC
Confidence 11 11234788999987653 468999999843
No 32
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.17 E-value=4.6e-10 Score=92.43 Aligned_cols=142 Identities=20% Similarity=0.131 Sum_probs=89.8
Q ss_pred CcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh---hcCchhHHHhhcCCccccccccc
Q 023464 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK---VYGFYDECQRKYGNANAWRYCTD 120 (282)
Q Consensus 44 ~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk---~~G~~ee~~~~~~~~~~~~~~~~ 120 (282)
++.+++|+||+...+.++++.+.. .+.++++||++++++.+. +..... +.||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~----~~~~~~~~~V~GNhD~~~~------------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE----LELKAPVIAVRGNCDGEVD------------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch----hhcCCcEEEEeCCCCCcCC-------------
Confidence 478999999999999999998654 689999999999998765 111111 8999986321
Q ss_pred hhcccceEEEE--e-CcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhH
Q 023464 121 VFDYLTLSAII--D-GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 197 (282)
Q Consensus 121 ~f~~LPl~~~i--~-~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~ 197 (282)
+..+|....+ + .+++++||...+..... ++
T Consensus 62 -~~~~p~~~~~~~~g~~i~v~Hg~~~~~~~~~---------------------------------------------~~- 94 (155)
T cd00841 62 -FPILPEEAVLEIGGKRIFLTHGHLYGVKNGL---------------------------------------------DR- 94 (155)
T ss_pred -cccCCceEEEEECCEEEEEECCcccccccch---------------------------------------------hh-
Confidence 2345544333 2 37999998864421100 00
Q ss_pred HHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcC
Q 023464 198 SEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE 253 (282)
Q Consensus 198 ~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~ 253 (282)
.++++..+.++++.||+..+.... ..+..++.-.|....-.......+++.+++
T Consensus 95 ~~~~~~~~~d~vi~GHtH~~~~~~--~~~~~~inpGs~~~~~~~~~~~~~i~~~~~ 148 (155)
T cd00841 95 LYLAKEGGADVVLYGHTHIPVIEK--IGGVLLLNPGSLSLPRGGGPPTYAILEIDD 148 (155)
T ss_pred hhhhhhcCCCEEEECcccCCccEE--ECCEEEEeCCCccCcCCCCCCeEEEEEecC
Confidence 234556678999999999876432 313344555665433221122346666665
No 33
>PRK09453 phosphodiesterase; Provisional
Probab=99.15 E-value=3.9e-10 Score=95.74 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=53.5
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCC--------hHHHHHHHHHhh-----hcCchhHHH
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN--------SLEVFTILLLLK-----VYGFYDECQ 106 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk-----~~G~~ee~~ 106 (282)
+++.+++|+||++.+++++++.+...+.+.++++||++|+|++ +.+++..|..+. +.||||...
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYADKIIAVRGNCDSEV 77 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcCCceEEEccCCcchh
Confidence 4789999999999999999988755556899999999999873 567888877763 889999754
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.11 E-value=7.8e-10 Score=91.67 Aligned_cols=82 Identities=21% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhhcCCccccc
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRKYGNANAWR 116 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~~~~~~~~~ 116 (282)
+++.+++|+||+..+++.+++..... ..+.++++||++ +.+++..+.++. +.||||.....+
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~~~~~~V~GN~D~~~~~~------- 68 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLAAKVIAVRGNNDGERDEL------- 68 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhCCceEEEccCCCchhhhC-------
Confidence 47899999999998887777665544 568899999999 457888887765 899999632221
Q ss_pred cccchhcccceEEEEeCcEEEecCCC
Q 023464 117 YCTDVFDYLTLSAIIDGTVLCVHGGL 142 (282)
Q Consensus 117 ~~~~~f~~LPl~~~i~~~~l~vHgGi 142 (282)
-...++. +-+.+++++||..
T Consensus 69 -----~~~~~~~-~~g~~i~l~Hg~~ 88 (158)
T TIGR00040 69 -----PEEEIFE-AEGIDFGLVHGDL 88 (158)
T ss_pred -----CcceEEE-ECCEEEEEEeCcc
Confidence 1222332 1144799999984
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.01 E-value=2.3e-09 Score=87.62 Aligned_cols=137 Identities=23% Similarity=0.245 Sum_probs=84.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh---hcCchhHHHhhcCCcccccccc
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK---VYGFYDECQRKYGNANAWRYCT 119 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk---~~G~~ee~~~~~~~~~~~~~~~ 119 (282)
+++.++||+|++...+.++++.+ ...+.++++||++|+ .+++..+.... +.||||... +.+...-. +
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~~~~~v~GNHD~~~--~~~~~~~~-~- 70 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDIPVYVVRGNHDNWA--FPNENDEE-Y- 70 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHHEEEEE--CCHSTH--HHSEECTC-S-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcCCEEEEeCCccccc--chhhhhcc-c-
Confidence 47899999999999999999987 346889999999993 77777776656 899999543 21111000 0
Q ss_pred chhcccceEEEEeCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHH
Q 023464 120 DVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSE 199 (282)
Q Consensus 120 ~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~ 199 (282)
+....... .-..+++++||...... .+.+.+.+
T Consensus 71 -~~~~~~~~-~~~~~i~~~H~~~~~~~---------------------------------------------~~~~~~~~ 103 (156)
T PF12850_consen 71 -LLDALRLT-IDGFKILLSHGHPYDVQ---------------------------------------------WDPAELRE 103 (156)
T ss_dssp -SHSEEEEE-ETTEEEEEESSTSSSST---------------------------------------------TTHHHHHH
T ss_pred -cccceeee-ecCCeEEEECCCCcccc---------------------------------------------cChhhhhh
Confidence 11111111 11347999999764410 12334556
Q ss_pred HHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCc
Q 023464 200 FNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 238 (282)
Q Consensus 200 fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y 238 (282)
.+...++++++.||...+.-.. ..+..+++..|....
T Consensus 104 ~~~~~~~~~~~~GH~H~~~~~~--~~~~~~~~~Gs~~~~ 140 (156)
T PF12850_consen 104 ILSRENVDLVLHGHTHRPQVFK--IGGIHVINPGSIGGP 140 (156)
T ss_dssp HHHHTTSSEEEESSSSSEEEEE--ETTEEEEEE-GSSS-
T ss_pred hhcccCCCEEEcCCcccceEEE--ECCEEEEECCcCCCC
Confidence 6778899999999998755443 325567777776543
No 36
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.91 E-value=3.8e-09 Score=84.75 Aligned_cols=140 Identities=44% Similarity=0.809 Sum_probs=114.4
Q ss_pred hcCchhHHHhhcCCcccccc---ccchhcccceEEEEeC-cEEEecCCCCCCC-CCHHHHHhhhccc--cCCCCCCcccc
Q 023464 98 VYGFYDECQRKYGNANAWRY---CTDVFDYLTLSAIIDG-TVLCVHGGLSPDI-RTIDQIRVIERNC--EIPHEGPFCDL 170 (282)
Q Consensus 98 ~~G~~ee~~~~~~~~~~~~~---~~~~f~~LPl~~~i~~-~~l~vHgGi~~~~-~~l~~i~~i~r~~--~~~~~~~~~~l 170 (282)
.+|+.+++...++....|.. ..++|+.||+.+++.. .++|.||++++.. ..+++++.+.|.. .....+...+.
T Consensus 6 ~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~~~ 85 (155)
T COG0639 6 LYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTHDL 85 (155)
T ss_pred hhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccccc
Confidence 35677777777765546776 9999999999998888 8999999999975 6688888887765 66667777777
Q ss_pred ccCCCCC--CCCcccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcc
Q 023464 171 MWSDPED--IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 239 (282)
Q Consensus 171 lWsdp~~--~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 239 (282)
+|++|.. ...|.++++|.+..+ .+....|+..+..+.+.++|.....++...+ .+..+|.||+++|+
T Consensus 86 ~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~-~~~~lt~~~~~~~~ 154 (155)
T COG0639 86 LWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVF-GGGLLTAFSAPNYC 154 (155)
T ss_pred cCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEe-CCCeeeEEeccccc
Confidence 9999884 689999999998766 6788888877777779999999999998866 54889999999886
No 37
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.83 E-value=8.5e-09 Score=82.97 Aligned_cols=61 Identities=33% Similarity=0.409 Sum_probs=45.2
Q ss_pred CcceeecCCCCHHHH----HHHHHhCCCCCCCceeeecccccCCCChHHHHHHH----HHhh-------hcCchhH
Q 023464 44 PVTVCGDIHGQFHDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTIL----LLLK-------VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~~~~l----~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l----~~lk-------~~G~~ee 104 (282)
|+.+|||+|+..... ..+.......+.+.+|++||++|+|..+.+..... .... +.||||.
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~ 77 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDY 77 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSS
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccc
Confidence 689999999999987 34444444455688999999999999887776653 1111 8899986
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.78 E-value=2.1e-08 Score=80.92 Aligned_cols=112 Identities=20% Similarity=0.123 Sum_probs=76.1
Q ss_pred CcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChH--HHHHHHHHhh------hcCchhHHHhhcCCcccc
Q 023464 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSL--EVFTILLLLK------VYGFYDECQRKYGNANAW 115 (282)
Q Consensus 44 ~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk------~~G~~ee~~~~~~~~~~~ 115 (282)
++.++||+||++. .....+.+.+|++||++++|..+- +.+.++.+++ +.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~~~~~v~GNHD~~~~-------- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPHPHKIVIAGNHDLTLD-------- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCCeEEEEECCCCCcCC--------
Confidence 4789999999987 122345688999999999986532 3555555543 7789883211
Q ss_pred ccccchhcccceEEEEeCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChh
Q 023464 116 RYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 195 (282)
Q Consensus 116 ~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~ 195 (282)
.-+.+++++||.+.+.... .+. ....|.+
T Consensus 66 --------------~~~~~ilv~H~~p~~~~~~----------------------~~~---------------~~~~g~~ 94 (135)
T cd07379 66 --------------PEDTDILVTHGPPYGHLDL----------------------VSS---------------GQRVGCE 94 (135)
T ss_pred --------------CCCCEEEEECCCCCcCccc----------------------ccc---------------CcccCCH
Confidence 1144689999964321100 000 1135677
Q ss_pred hHHHHHHhcCCcEEEecccccccceE
Q 023464 196 VTSEFNHINNLDLVCRAHQLVQEGLK 221 (282)
Q Consensus 196 ~~~~fl~~~~~~~iIrgH~~~~~G~~ 221 (282)
.+.+++++.+.++++.||+..+.|+.
T Consensus 95 ~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 95 ELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred HHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 88889999999999999999988876
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.74 E-value=2.7e-07 Score=78.28 Aligned_cols=121 Identities=19% Similarity=0.212 Sum_probs=79.3
Q ss_pred CcceeecCC-CCHH-----HHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhhcCCc
Q 023464 44 PVTVCGDIH-GQFH-----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRKYGNA 112 (282)
Q Consensus 44 ~i~vvGDiH-G~~~-----~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~~~~~ 112 (282)
++.||+|.| |.-. .+.++++. ..-+.++.+||+++ .+++.++..+. ++||+|...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~~~~~~V~GN~D~~~------ 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIAPDVHIVRGDFDENL------ 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhCCceEEEECCCCccc------
Confidence 478999999 6543 35555543 34588999999987 57788776644 899998632
Q ss_pred cccccccchhcccceEEEE---eCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCe
Q 023464 113 NAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAG 189 (282)
Q Consensus 113 ~~~~~~~~~f~~LPl~~~i---~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~ 189 (282)
.||....+ +.+++++||..-....
T Consensus 67 -----------~lp~~~~~~~~g~~i~l~HG~~~~~~~------------------------------------------ 93 (178)
T cd07394 67 -----------NYPETKVITVGQFKIGLIHGHQVVPWG------------------------------------------ 93 (178)
T ss_pred -----------cCCCcEEEEECCEEEEEEECCcCCCCC------------------------------------------
Confidence 34443332 2389999985311000
Q ss_pred eeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCC
Q 023464 190 WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 236 (282)
Q Consensus 190 ~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~ 236 (282)
..+.+.++.+..+++.++.||+..+.-. . ..+..++...|++
T Consensus 94 ---~~~~~~~~~~~~~~dvii~GHTH~p~~~-~-~~g~~viNPGSv~ 135 (178)
T cd07394 94 ---DPDSLAALQRQLDVDILISGHTHKFEAF-E-HEGKFFINPGSAT 135 (178)
T ss_pred ---CHHHHHHHHHhcCCCEEEECCCCcceEE-E-ECCEEEEECCCCC
Confidence 1223445566778899999999987533 2 3255677788875
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.72 E-value=2.7e-08 Score=87.84 Aligned_cols=56 Identities=25% Similarity=0.419 Sum_probs=42.6
Q ss_pred CcceeecCCCCHHHHH-HHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHH
Q 023464 44 PVTVCGDIHGQFHDLM-KLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDEC 105 (282)
Q Consensus 44 ~i~vvGDiHG~~~~l~-~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~ 105 (282)
+++++|||||++.... +.++.. ..+.++++||+++. +.+++..|..+. +.||||..
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l~~p~~~V~GNHD~~ 63 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSLPLPKAVILGNHDAW 63 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhCCCCeEEEcCCCccc
Confidence 5899999999987642 334332 35899999999864 678888888774 88999963
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.44 E-value=1.4e-06 Score=77.31 Aligned_cols=205 Identities=13% Similarity=0.061 Sum_probs=101.1
Q ss_pred CCcceeecCCCCH------HHHHHHHHhCCCCCCCceeeecccccC--C-----CChHHHHHHHHHhh--------hcCc
Q 023464 43 SPVTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDR--G-----YNSLEVFTILLLLK--------VYGF 101 (282)
Q Consensus 43 ~~i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~lk--------~~G~ 101 (282)
+++++++|+|... ..+.+.|+.. ....+.++++||++|. | +...+++.+|..+. +.||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GN 79 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGN 79 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 4789999999542 2455555432 1235889999999985 2 23456677776664 8899
Q ss_pred hhHHHhhcCCcccccccc-chhcccceEEEE-eCcEEEecCCCCCCCCCHH-HHHhhhcccc---CCCCCCccccccCCC
Q 023464 102 YDECQRKYGNANAWRYCT-DVFDYLTLSAII-DGTVLCVHGGLSPDIRTID-QIRVIERNCE---IPHEGPFCDLMWSDP 175 (282)
Q Consensus 102 ~ee~~~~~~~~~~~~~~~-~~f~~LPl~~~i-~~~~l~vHgGi~~~~~~l~-~i~~i~r~~~---~~~~~~~~~llWsdp 175 (282)
||...... ..+... .++.. |....+ +.+++++||-.-+.-.... .++++-|... .....+...-+|-.+
T Consensus 80 HD~~~~~~----~~~~~g~~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~p~~~~~~ia~ 154 (241)
T PRK05340 80 RDFLLGKR----FAKAAGMTLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLALPLSIRLRIAA 154 (241)
T ss_pred CchhhhHH----HHHhCCCEEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhCCHHHHHHHHH
Confidence 99643211 000000 11111 222223 3469999999765322111 1223222100 000000000000000
Q ss_pred CCCC-CcccCCCCCeee--eChhhHHHHHHhcCCcEEEecccccccceEEEecCC---eEEEEecCCCcccCCCCceEEE
Q 023464 176 EDIE-TWAVSPRGAGWL--FGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDK---GLVTVWSAPNYCYRCGNVASIL 249 (282)
Q Consensus 176 ~~~~-~~~~~~rg~~~~--fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~---~~itifSa~~y~~~~~n~~avl 249 (282)
.-+. .-..+.+....+ ..++++.+.++..+++.+|.||+..+.-..... ++ +.+.+.+. ...+.++
T Consensus 155 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~~~~~~~~lgdw-------~~~~~~~ 226 (241)
T PRK05340 155 KMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQA-GGQPATRIVLGDW-------HEQGSVL 226 (241)
T ss_pred HHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccC-CCcceEEEEeCCC-------CCCCeEE
Confidence 0000 000000011112 345678888999999999999998765333322 32 33444433 1236678
Q ss_pred EEcCCCceEEEEe
Q 023464 250 SFNENMEREVKFF 262 (282)
Q Consensus 250 ~i~~~~~~~~~~~ 262 (282)
+++.++ .++..|
T Consensus 227 ~~~~~~-~~~~~~ 238 (241)
T PRK05340 227 KVDADG-VELIPF 238 (241)
T ss_pred EEECCc-eEEEeC
Confidence 887653 555554
No 42
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.43 E-value=1.1e-05 Score=71.02 Aligned_cols=63 Identities=17% Similarity=0.226 Sum_probs=51.0
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh--------hcCchhHH
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK--------VYGFYDEC 105 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk--------~~G~~ee~ 105 (282)
.++.+++|+||++..++++++.+.....+.+|.+||++++|+..-++..++..+. +.||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCceEEEcCCCChH
Confidence 4699999999999999999997654556899999999999976655655555442 88999963
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.42 E-value=4.4e-06 Score=70.17 Aligned_cols=59 Identities=24% Similarity=0.257 Sum_probs=44.0
Q ss_pred cceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCC-hHHHHHHHHHhh-----hcCchhHH
Q 023464 45 VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN-SLEVFTILLLLK-----VYGFYDEC 105 (282)
Q Consensus 45 i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk-----~~G~~ee~ 105 (282)
|.++||+||++..+.. ......+.+.+|+.||++++|.. ..+.+..+..++ +.||||..
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~~p~~~v~GNHD~~ 65 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAIGVPVLAVPGNCDTP 65 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhcCCCEEEEcCCCCCH
Confidence 5789999999999877 32333346889999999999975 445555555554 88999963
No 44
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.29 E-value=1.4e-05 Score=67.37 Aligned_cols=159 Identities=19% Similarity=0.106 Sum_probs=97.5
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHH--HHHhh-hcCchhHHHhhcCCcccccccc
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTI--LLLLK-VYGFYDECQRKYGNANAWRYCT 119 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~--l~~lk-~~G~~ee~~~~~~~~~~~~~~~ 119 (282)
+++.|++|.||...+.++..+.......+.+|.+||++...+. ..+.. ...+. ++||.|.-..+
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~--~~l~~~~~~~i~~V~GN~D~~~~~----------- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL--DALEGGLAAKLIAVRGNCDGEVDQ----------- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch--HHhhcccccceEEEEccCCCcccc-----------
Confidence 5789999999999866666666555667899999999976432 22222 11111 77887642111
Q ss_pred chhcccceEEE--E-eCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhh
Q 023464 120 DVFDYLTLSAI--I-DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 196 (282)
Q Consensus 120 ~~f~~LPl~~~--i-~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~ 196 (282)
..+|-... + +-|++++||....--.+. ..
T Consensus 69 ---~~~p~~~~~~~~g~ki~l~HGh~~~~~~~~---------------------------------------------~~ 100 (172)
T COG0622 69 ---EELPEELVLEVGGVKIFLTHGHLYFVKTDL---------------------------------------------SL 100 (172)
T ss_pred ---ccCChhHeEEECCEEEEEECCCccccccCH---------------------------------------------HH
Confidence 22332222 2 358999999653311111 23
Q ss_pred HHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcC-CCceEEEEeeccC
Q 023464 197 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMEREVKFFTETE 266 (282)
Q Consensus 197 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~ 266 (282)
++.+.+..++|.+|.|||..+.-.+. - +-.++.-.|.+.+-+ ++.++++.++. +.++....++...
T Consensus 101 l~~la~~~~~Dvli~GHTH~p~~~~~-~-~i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~~~~~~~~~~ 167 (172)
T COG0622 101 LEYLAKELGADVLIFGHTHKPVAEKV-G-GILLVNPGSVSGPRG--GNPASYAILDVDNLEVEVLFLERDR 167 (172)
T ss_pred HHHHHHhcCCCEEEECCCCcccEEEE-C-CEEEEcCCCcCCCCC--CCCcEEEEEEcCCCEEEEEEeeccc
Confidence 44455667789999999998654333 1 235677788887754 35545555553 4677777766554
No 45
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.28 E-value=4.4e-06 Score=64.90 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=75.0
Q ss_pred ceeecCCCCHHHHHHHH--HhCCCCCCCceeeecccccCCCChHHHHHHH-HHhh--------hcCchhHHHhhcCCccc
Q 023464 46 TVCGDIHGQFHDLMKLF--QTGGHVPETNYIFMGDFVDRGYNSLEVFTIL-LLLK--------VYGFYDECQRKYGNANA 114 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l-~~lk--------~~G~~ee~~~~~~~~~~ 114 (282)
+++||+|+......... ........+.+|++||+++.+....+..... ..++ +.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999998765 3333344588999999999998776655441 1122 778888
Q ss_pred cccccchhcccceEEEEeCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeCh
Q 023464 115 WRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGS 194 (282)
Q Consensus 115 ~~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~ 194 (282)
++++|..+.+....... .. ....
T Consensus 70 --------------------i~~~H~~~~~~~~~~~~---------------------~~----------------~~~~ 92 (131)
T cd00838 70 --------------------ILLTHGPPYDPLDELSP---------------------DE----------------DPGS 92 (131)
T ss_pred --------------------EEEeccCCCCCchhhcc---------------------cc----------------hhhH
Confidence 89999988664321100 00 0044
Q ss_pred hhHHHHHHhcCCcEEEecccccccceE
Q 023464 195 RVTSEFNHINNLDLVCRAHQLVQEGLK 221 (282)
Q Consensus 195 ~~~~~fl~~~~~~~iIrgH~~~~~G~~ 221 (282)
..+...+...+.+.++.||+.....+.
T Consensus 93 ~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 93 EALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHHHHhCCCEEEeCCeecccccc
Confidence 567778888999999999998766544
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.11 E-value=5.8e-06 Score=68.76 Aligned_cols=60 Identities=20% Similarity=0.095 Sum_probs=42.0
Q ss_pred cceeecCCCCHHHHHHHHH-hCCCCCCCceeeecccccCCCChHHHHHHHHHhh-------hcCchhHH
Q 023464 45 VTVCGDIHGQFHDLMKLFQ-TGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK-------VYGFYDEC 105 (282)
Q Consensus 45 i~vvGDiHG~~~~l~~il~-~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk-------~~G~~ee~ 105 (282)
+.+++|+|++.......+. .......+.++++||+++++..+..+. ++...+ +.||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhcCCccEEEeCCCcceE
Confidence 4689999999987766653 233344578999999999987665543 222222 78999864
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.07 E-value=2.4e-05 Score=62.73 Aligned_cols=101 Identities=17% Similarity=0.023 Sum_probs=69.6
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh------hcCchhHHHhhcCCcccccccc
Q 023464 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK------VYGFYDECQRKYGNANAWRYCT 119 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk------~~G~~ee~~~~~~~~~~~~~~~ 119 (282)
.||+|.||..+.+.++... ..+.+.++++||+. .+++..+..++ +.||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~~~~~~~V~GN~D---------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTMLNVPVYYVHGNHD---------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHcCCCEEEEeCCCc----------------
Confidence 3899999998877776664 34568999999974 24556665542 788887
Q ss_pred chhcccceEEEEeCcEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeChhhHHH
Q 023464 120 DVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSE 199 (282)
Q Consensus 120 ~~f~~LPl~~~i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~ 199 (282)
-+++++|+-+.+.... .+ ...-|.+++.+
T Consensus 57 -------------~~Ilv~H~pp~~~~~~-------------------~~-------------------~~~~g~~~l~~ 85 (129)
T cd07403 57 -------------VDILLTHAPPAGIGDG-------------------ED-------------------FAHRGFEAFLD 85 (129)
T ss_pred -------------cCEEEECCCCCcCcCc-------------------cc-------------------ccccCHHHHHH
Confidence 3689999743211000 00 01134567788
Q ss_pred HHHhcCCcEEEecccccccceE
Q 023464 200 FNHINNLDLVCRAHQLVQEGLK 221 (282)
Q Consensus 200 fl~~~~~~~iIrgH~~~~~G~~ 221 (282)
++++.+.+.++.||...+..+.
T Consensus 86 ~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 86 FIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred HHHHHCCcEEEEcCcCCCcCcc
Confidence 8888999999999999876665
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.03 E-value=1.8e-05 Score=69.69 Aligned_cols=194 Identities=11% Similarity=0.053 Sum_probs=93.1
Q ss_pred cceeecCCCCH------HHHHHHHHhCCCCCCCceeeecccccCC-----CC--hHHHHHHHHHhh--------hcCchh
Q 023464 45 VTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRG-----YN--SLEVFTILLLLK--------VYGFYD 103 (282)
Q Consensus 45 i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk--------~~G~~e 103 (282)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|. +.||||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD 79 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRD 79 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 36899999543 234444443321 458899999999952 11 134455555553 889999
Q ss_pred HHHhhcCCccccccc-cchhcccceEEEEeCcEEEecCCCCCCCCC-HHHHHhhhccc-------cCCC--CCCcccccc
Q 023464 104 ECQRKYGNANAWRYC-TDVFDYLTLSAIIDGTVLCVHGGLSPDIRT-IDQIRVIERNC-------EIPH--EGPFCDLMW 172 (282)
Q Consensus 104 e~~~~~~~~~~~~~~-~~~f~~LPl~~~i~~~~l~vHgGi~~~~~~-l~~i~~i~r~~-------~~~~--~~~~~~llW 172 (282)
...... ..+.. ..++..--...+-+.+++++||-.-..-.. -.-.+++-|.. .+|. ...+...++
T Consensus 80 ~~~~~~----~~~~~gi~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~~~~r~~l~~~~~ 155 (231)
T TIGR01854 80 FLIGKR----FAREAGMTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLPLAVRVKLARKIR 155 (231)
T ss_pred hhhhHH----HHHHCCCEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 743221 11100 111111111112245899999986532111 11122221210 0000 001112222
Q ss_pred CCCCCCCCcccCCCCCe-eeeChhhHHHHHHhcCCcEEEecccccccceEEEecCC---eEEEEecCCCcccCCCCceEE
Q 023464 173 SDPEDIETWAVSPRGAG-WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDK---GLVTVWSAPNYCYRCGNVASI 248 (282)
Q Consensus 173 sdp~~~~~~~~~~rg~~-~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~---~~itifSa~~y~~~~~n~~av 248 (282)
+...... ..+... ....+..+++.++..+++++|.||+..+.-..... ++ +.+.+.+. ...+.+
T Consensus 156 ~~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~-~~~~~~~~~lgdW-------~~~~~~ 223 (231)
T TIGR01854 156 AESRADK----QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQA-DGQPATRIVLGDW-------YRQGSI 223 (231)
T ss_pred HHHHHhc----CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeeccc-CCCccEEEEECCC-------ccCCeE
Confidence 2110000 000011 11356678888899999999999998766444332 22 23444333 123556
Q ss_pred EEEcCCC
Q 023464 249 LSFNENM 255 (282)
Q Consensus 249 l~i~~~~ 255 (282)
+.+++++
T Consensus 224 ~~~~~~g 230 (231)
T TIGR01854 224 LRVDADG 230 (231)
T ss_pred EEEcCCC
Confidence 7777654
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.00 E-value=0.00012 Score=63.70 Aligned_cols=71 Identities=14% Similarity=0.187 Sum_probs=41.9
Q ss_pred ChhhHHHHHHhc-CCcEEEecccccccceEEE----ecCCeEEEEecCCCcccCCC-CceEEEEEcCC-CceEEEEeec
Q 023464 193 GSRVTSEFNHIN-NLDLVCRAHQLVQEGLKYM----FQDKGLVTVWSAPNYCYRCG-NVASILSFNEN-MEREVKFFTE 264 (282)
Q Consensus 193 g~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~----~~~~~~itifSa~~y~~~~~-n~~avl~i~~~-~~~~~~~~~~ 264 (282)
+...+.+.++++ ++++++-||.... +.... ..++.+..+.+-.......+ ..-.+++++++ ..+.+.+|.|
T Consensus 136 ~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 136 GQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred HHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 445677888887 8999999998753 23222 11233444433221111112 23468888876 5788888876
No 50
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.98 E-value=7.9e-05 Score=60.20 Aligned_cols=29 Identities=17% Similarity=0.063 Sum_probs=23.9
Q ss_pred ChhhHHHHHHhcCCcEEEecccccccceE
Q 023464 193 GSRVTSEFNHINNLDLVCRAHQLVQEGLK 221 (282)
Q Consensus 193 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 221 (282)
+.+.+.+++++.++++++.||+..+..+.
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 45678888999999999999999866554
No 51
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.73 E-value=0.0014 Score=58.54 Aligned_cols=58 Identities=14% Similarity=0.042 Sum_probs=36.8
Q ss_pred hhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCce-EEEEEcCCC
Q 023464 195 RVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVA-SILSFNENM 255 (282)
Q Consensus 195 ~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~-avl~i~~~~ 255 (282)
..+.+.+++.+++.++.||........ + +|--..+.+++.++....+.| .++.++++.
T Consensus 196 ~~l~~ll~~~~V~~v~~GH~H~~~~~~--~-~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 196 KPLLDKFKKAGVKAVFSGHYHRNAGGR--Y-GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHhcCceEEEECccccCCceE--E-CCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 457778889999999999999876543 4 554333334444433333334 588887553
No 52
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.55 E-value=0.0016 Score=56.95 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=42.0
Q ss_pred CcceeecCCCC------------HHHHHHHHHhCCCC--CCCceeeecccccCCCC-hH-HHHHHHHHhh-----hcCch
Q 023464 44 PVTVCGDIHGQ------------FHDLMKLFQTGGHV--PETNYIFMGDFVDRGYN-SL-EVFTILLLLK-----VYGFY 102 (282)
Q Consensus 44 ~i~vvGDiHG~------------~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~-s~-evl~~l~~lk-----~~G~~ 102 (282)
|+.+++|+|=. ...++++++.+... +.+-+|++||+++.|.. .. ++...+..++ +.|||
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~~p~~~v~GNH 80 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALPIPVYLLPGNH 80 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 57899999944 34677777765433 55789999999998753 22 2334444444 88999
Q ss_pred hH
Q 023464 103 DE 104 (282)
Q Consensus 103 ee 104 (282)
|.
T Consensus 81 D~ 82 (240)
T cd07402 81 DD 82 (240)
T ss_pred CC
Confidence 95
No 53
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.55 E-value=0.00034 Score=61.39 Aligned_cols=190 Identities=15% Similarity=0.086 Sum_probs=98.3
Q ss_pred ceeecCCCC------HHHHHHHHHhCCCCCCCceeeeccccc--CCCC-----hHHHHHHHHHhh--------hcCchhH
Q 023464 46 TVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVD--RGYN-----SLEVFTILLLLK--------VYGFYDE 104 (282)
Q Consensus 46 ~vvGDiHG~------~~~l~~il~~~~~~~~~~~vfLGD~vD--rG~~-----s~evl~~l~~lk--------~~G~~ee 104 (282)
+.|+|+|=. .+.|.+.|+... +..+.+.+|||++| .|.+ --+|...|..+- +.||||+
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 368898844 233455555432 34588999999996 2333 134444444443 7799999
Q ss_pred HHhhcCCccccccccchhcccceEE---EEeCcEEEecCCCCCCCCC------------HHHHHhhhccccCCCCCCccc
Q 023464 105 CQRKYGNANAWRYCTDVFDYLTLSA---IIDGTVLCVHGGLSPDIRT------------IDQIRVIERNCEIPHEGPFCD 169 (282)
Q Consensus 105 ~~~~~~~~~~~~~~~~~f~~LPl~~---~i~~~~l~vHgGi~~~~~~------------l~~i~~i~r~~~~~~~~~~~~ 169 (282)
.+.++-....- -+.-+|-.. .-+.+++++||-.--.... +.+..-++.+... ...+..
T Consensus 80 ll~~~f~~~~g-----~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~l~~--R~ri~~ 152 (237)
T COG2908 80 LLGKRFAQEAG-----GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLPLRV--RRRIAY 152 (237)
T ss_pred HHHHHHHhhcC-----ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhHHHH--HHHHHH
Confidence 76665221100 022333332 2367899999976431110 1111111111000 001122
Q ss_pred cccCCCCCCCCcccCCCCCe--ee-eChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCce
Q 023464 170 LMWSDPEDIETWAVSPRGAG--WL-FGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVA 246 (282)
Q Consensus 170 llWsdp~~~~~~~~~~rg~~--~~-fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~ 246 (282)
-+|+. ..|........ +. ..+.++.+-+++.+++.+|.||+..+..-.. - +..-+...|-- ..+
T Consensus 153 k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i-~-~~~yi~lGdW~-------~~~ 219 (237)
T COG2908 153 KIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI-P-GITYINLGDWV-------SEG 219 (237)
T ss_pred HHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC-C-CceEEecCcch-------hcc
Confidence 24443 12222211111 11 4566777889999999999999998776655 1 23333333331 456
Q ss_pred EEEEEcCCCc
Q 023464 247 SILSFNENME 256 (282)
Q Consensus 247 avl~i~~~~~ 256 (282)
++++++.+..
T Consensus 220 s~~~v~~~~~ 229 (237)
T COG2908 220 SILEVDDGGL 229 (237)
T ss_pred eEEEEecCcE
Confidence 8898886654
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.52 E-value=0.0026 Score=57.21 Aligned_cols=61 Identities=23% Similarity=0.292 Sum_probs=41.2
Q ss_pred CcceeecCC-C------------CHHHHHHHHHhCCCCCCCceeeecccccCCCC----hHHH-HHHHHHhh-----hcC
Q 023464 44 PVTVCGDIH-G------------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN----SLEV-FTILLLLK-----VYG 100 (282)
Q Consensus 44 ~i~vvGDiH-G------------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~----s~ev-l~~l~~lk-----~~G 100 (282)
++.+++|+| + ....+.++++.+.....+-+|++||++++|.. ..+. ...+-.++ +.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 2 24567777776654446789999999998863 2222 22222333 889
Q ss_pred chhH
Q 023464 101 FYDE 104 (282)
Q Consensus 101 ~~ee 104 (282)
|||.
T Consensus 82 NHD~ 85 (267)
T cd07396 82 NHDL 85 (267)
T ss_pred cccc
Confidence 9985
No 55
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.48 E-value=0.00018 Score=62.14 Aligned_cols=28 Identities=11% Similarity=-0.040 Sum_probs=21.6
Q ss_pred ChhhHHHHHHhcCCcEEEecccccccce
Q 023464 193 GSRVTSEFNHINNLDLVCRAHQLVQEGL 220 (282)
Q Consensus 193 g~~~~~~fl~~~~~~~iIrgH~~~~~G~ 220 (282)
....+.+.++..+++.+|.||+..+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 3445667778899999999999876533
No 56
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.36 E-value=0.0012 Score=65.13 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=48.7
Q ss_pred ChhhHHHHHHhcCCc----EEEecccccc--cceEEEecCCeEEEEecC--CCcccCCCCceEEEEEcCCCceEEEEeec
Q 023464 193 GSRVTSEFNHINNLD----LVCRAHQLVQ--EGLKYMFQDKGLVTVWSA--PNYCYRCGNVASILSFNENMEREVKFFTE 264 (282)
Q Consensus 193 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~~~~~~~~itifSa--~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 264 (282)
.++..+..|+..|++ .||.||+||. .|-...-++||++.|..+ ..|.. ..+-|+.-.|...-.+.+.+.+|
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskAYqk-~TGIAGYTLiyNS~gl~L~~H~p 585 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKAYQK-TTGIAGYTLIYNSYGLQLVAHQP 585 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhhhcc-ccCccceEEEecCCcceeccCCC
Confidence 455678889999998 9999999986 777776679999999554 12322 22334433444455555666555
Q ss_pred cC
Q 023464 265 TE 266 (282)
Q Consensus 265 ~~ 266 (282)
=.
T Consensus 586 F~ 587 (640)
T PF06874_consen 586 FE 587 (640)
T ss_pred CC
Confidence 43
No 57
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.35 E-value=0.016 Score=50.58 Aligned_cols=202 Identities=17% Similarity=0.172 Sum_probs=111.5
Q ss_pred cCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccc--cCCCChHHHHH-HHHHhh--------hcCchhHHHhhcC
Q 023464 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV--DRGYNSLEVFT-ILLLLK--------VYGFYDECQRKYG 110 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v--DrG~~s~evl~-~l~~lk--------~~G~~ee~~~~~~ 110 (282)
.+++..+.|+||....+.++++.+.....+-+|+.||+. ++|+.-.-.-. .+..++ +.||-|--
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~~~v~avpGNcD~~----- 77 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELGIPVLAVPGNCDPP----- 77 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcCCeEEEEcCCCChH-----
Confidence 367999999999999999999998888889999999999 88874322221 133343 67775521
Q ss_pred Cccccccccch-hcccceEEEEeCcEEEecCCCCCC-CC-----CHHHHHhhhc-cccCCCCCCc-cccccCCCCCCCCc
Q 023464 111 NANAWRYCTDV-FDYLTLSAIIDGTVLCVHGGLSPD-IR-----TIDQIRVIER-NCEIPHEGPF-CDLMWSDPEDIETW 181 (282)
Q Consensus 111 ~~~~~~~~~~~-f~~LPl~~~i~~~~l~vHgGi~~~-~~-----~l~~i~~i~r-~~~~~~~~~~-~~llWsdp~~~~~~ 181 (282)
.+...+... ..-.+-...+++--||-=||..|. +. +.++|...-+ ..+... ... --++.+-|-+...
T Consensus 78 --~v~~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il~~HaPP~gt~~- 153 (226)
T COG2129 78 --EVIDVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNILLTHAPPYGTLL- 153 (226)
T ss_pred --HHHHHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEEEecCCCCCccc-
Confidence 000000000 000011112333334444676543 22 2344443322 111110 000 1112222221100
Q ss_pred ccCCCCCeeeeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcCCCceEEEE
Q 023464 182 AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKF 261 (282)
Q Consensus 182 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~ 261 (282)
..+.| ..--|.++++++.++.+-...+.||=....|... -|..+-|--++- .....|++.+++. .+...+
T Consensus 154 -d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~---iG~TivVNPG~~----~~g~yA~i~l~~~-~Vk~~~ 223 (226)
T COG2129 154 -DTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK---IGNTIVVNPGPL----GEGRYALIELEKE-VVKLEQ 223 (226)
T ss_pred -cCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccc---cCCeEEECCCCc----cCceEEEEEecCc-EEEEEE
Confidence 02333 1226889999999999999999999887788877 344444433331 2456788888866 555555
Q ss_pred e
Q 023464 262 F 262 (282)
Q Consensus 262 ~ 262 (282)
|
T Consensus 224 ~ 224 (226)
T COG2129 224 F 224 (226)
T ss_pred e
Confidence 4
No 58
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.32 E-value=0.0002 Score=62.03 Aligned_cols=62 Identities=24% Similarity=0.274 Sum_probs=47.1
Q ss_pred CCcceeecCCCCHH----HHHHHHHhCCCCCCCceeeecccccCCCChH-HHHHHHHHhh-------hcCchhH
Q 023464 43 SPVTVCGDIHGQFH----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSL-EVFTILLLLK-------VYGFYDE 104 (282)
Q Consensus 43 ~~i~vvGDiHG~~~----~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk-------~~G~~ee 104 (282)
.++.+++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..+. +.||||.
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~~v~~v~GNHD~ 75 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPLGVYAVLGNHDY 75 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCCCEEEECCCccc
Confidence 47899999998744 6677777655444578999999999987764 5666666554 8899996
No 59
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.31 E-value=0.0054 Score=60.28 Aligned_cols=99 Identities=18% Similarity=0.144 Sum_probs=54.7
Q ss_pred CCcceeecCC-CCH----HHHHHHHHhCC-C--------CCCCceeeecccccC-CCCh---------------HHHHHH
Q 023464 43 SPVTVCGDIH-GQF----HDLMKLFQTGG-H--------VPETNYIFMGDFVDR-GYNS---------------LEVFTI 92 (282)
Q Consensus 43 ~~i~vvGDiH-G~~----~~l~~il~~~~-~--------~~~~~~vfLGD~vDr-G~~s---------------~evl~~ 92 (282)
..+.+|+|+| |.- ..+..+++.+. . ..-+.+|++||++|. |+.+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4689999999 653 22344433322 1 123689999999995 3211 245556
Q ss_pred HHHhh-------hcCchhHHHhhcCCccccccc--------cchhcccceEEEEeC-cEEEecCCC
Q 023464 93 LLLLK-------VYGFYDECQRKYGNANAWRYC--------TDVFDYLTLSAIIDG-TVLCVHGGL 142 (282)
Q Consensus 93 l~~lk-------~~G~~ee~~~~~~~~~~~~~~--------~~~f~~LPl~~~i~~-~~l~vHgGi 142 (282)
|.++. +.||||..........++..+ ..++.. |....+++ +++++||-.
T Consensus 324 L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 66664 789999765433222222221 122222 54333343 688899874
No 60
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.22 E-value=0.0004 Score=62.68 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=45.6
Q ss_pred CCcceeecCCCC----HHHHHHHHHhCCCCCCCceeeecccccCC--CChHHHHHHHHHhh-------hcCchhH
Q 023464 43 SPVTVCGDIHGQ----FHDLMKLFQTGGHVPETNYIFMGDFVDRG--YNSLEVFTILLLLK-------VYGFYDE 104 (282)
Q Consensus 43 ~~i~vvGDiHG~----~~~l~~il~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~lk-------~~G~~ee 104 (282)
.++..++|+|.. ...+.++++...-...+.++++||++|++ ...-++...|..|+ +.||||.
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 469999999976 55677777765545568899999999954 23334555666665 8899995
No 61
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=96.97 E-value=0.00084 Score=59.29 Aligned_cols=61 Identities=23% Similarity=0.138 Sum_probs=46.0
Q ss_pred CcceeecCCCCH------HHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh------hcCchhH
Q 023464 44 PVTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK------VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk------~~G~~ee 104 (282)
++.+++|+|+++ ..+.++++.+.-...+.+|+.||++++.+.+.+.+..+.++. +.||||.
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~~~~pv~~v~GNHD~ 73 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQELKGIKVTFNAGNHDM 73 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHhcCCcEEEECCCCCC
Confidence 478999999763 235566665544456889999999998877778877777632 8899995
No 62
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=96.92 E-value=0.0046 Score=52.91 Aligned_cols=41 Identities=7% Similarity=0.002 Sum_probs=25.7
Q ss_pred hHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCc
Q 023464 196 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 238 (282)
Q Consensus 196 ~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y 238 (282)
-++.+.+..+++.++.||.... .+.... ++..+.-.+++.|
T Consensus 155 ~~~~~~~~~~v~~v~~GH~H~~-~~~~~~-~~i~l~~g~~~g~ 195 (199)
T cd07383 155 LFKALLERGDVKGVFCGHDHGN-DFCGRY-NGIWLCYGRGTGY 195 (199)
T ss_pred HHHHHHHcCCeEEEEeCCCCCc-ceeccc-CCEEEeCCCCCCC
Confidence 4555668889999999999863 333333 4444444444433
No 63
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.90 E-value=0.0023 Score=53.51 Aligned_cols=90 Identities=19% Similarity=0.182 Sum_probs=53.3
Q ss_pred cceeecCCCCHHHH---------------HHHHHhCC--CCCCCceeeecccccCCCChHHHHHHHHHhh-----hcCch
Q 023464 45 VTVCGDIHGQFHDL---------------MKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFY 102 (282)
Q Consensus 45 i~vvGDiHG~~~~l---------------~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ 102 (282)
+++|+|+|=..... .++++... ..+.+.+|++||++++|..+.. +.++.++. +.|||
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~~~~~~v~GNH 79 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLNGRKHLIKGNH 79 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCCCCeEEEeCCC
Confidence 47888888655532 22333321 2345889999999999986644 55555554 88999
Q ss_pred hHHHhhcCCccccccccchhcccceEEEE---eCcEEEecC
Q 023464 103 DECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHG 140 (282)
Q Consensus 103 ee~~~~~~~~~~~~~~~~~f~~LPl~~~i---~~~~l~vHg 140 (282)
|......... ....+..+|....+ +.+++++|+
T Consensus 80 D~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~l~H~ 115 (168)
T cd07390 80 DSSLERKLLA-----FLLKFESVLQAVRLKIGGRRVYLSHY 115 (168)
T ss_pred Cchhhhcccc-----cccccceeeeEEEEEECCEEEEEEeC
Confidence 9654332110 11223444433332 347999995
No 64
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=96.89 E-value=0.092 Score=47.27 Aligned_cols=62 Identities=11% Similarity=0.041 Sum_probs=41.2
Q ss_pred CCcceeecCC-C-----------CHHHHHHHHHhCCC--CCCCceeeecccccCCC-ChH-HHHHHHHHhh-----hcCc
Q 023464 43 SPVTVCGDIH-G-----------QFHDLMKLFQTGGH--VPETNYIFMGDFVDRGY-NSL-EVFTILLLLK-----VYGF 101 (282)
Q Consensus 43 ~~i~vvGDiH-G-----------~~~~l~~il~~~~~--~~~~~~vfLGD~vDrG~-~s~-evl~~l~~lk-----~~G~ 101 (282)
.+++.|+|+| . ....|.++++.+.- ++.+-+|+.||++|.|. .+. .....+..++ +.||
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~~Pv~~v~GN 94 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGIAPLRKPCVWLPGN 94 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHHhhcCCcEEEeCCC
Confidence 4699999999 1 14567777776532 23478999999999884 222 2223333333 7899
Q ss_pred hhH
Q 023464 102 YDE 104 (282)
Q Consensus 102 ~ee 104 (282)
||.
T Consensus 95 HD~ 97 (275)
T PRK11148 95 HDF 97 (275)
T ss_pred CCC
Confidence 995
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=96.43 E-value=0.0052 Score=55.31 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=30.3
Q ss_pred cceeecCCCCHHHHHHHHHhC---CCCCCCceeeecccccCCC
Q 023464 45 VTVCGDIHGQFHDLMKLFQTG---GHVPETNYIFMGDFVDRGY 84 (282)
Q Consensus 45 i~vvGDiHG~~~~l~~il~~~---~~~~~~~~vfLGD~vDrG~ 84 (282)
|+|+||+||+++.+.+.++.. ...+.+-+|.+||+-..+.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~ 43 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN 43 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC
Confidence 589999999999997654432 2345788999999975544
No 66
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.33 E-value=0.14 Score=45.54 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=42.8
Q ss_pred CcceeecCCCC------HHHHHHHHHhCCCCCCCceeeecccccCCC-ChHHHHHHHHH---hh-----hcCchhH
Q 023464 44 PVTVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDRGY-NSLEVFTILLL---LK-----VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~-~s~evl~~l~~---lk-----~~G~~ee 104 (282)
+++.|+|+|-. ...+.++++.....+-|.+|+.||+.+.|. .+.+-+.-++. +. +.||||.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLARLELPAPVIVVPGNHDA 77 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHhhccCCCceEeeCCCCcC
Confidence 57889999977 345566667766555699999999999974 34444433333 22 8899985
No 67
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.27 E-value=0.0047 Score=57.66 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=41.1
Q ss_pred CCcceeecCC-C-----------CHHHHHHHHHhCCCCCCCceeeecccccCC-CChHHHHHHHHH-----hh-------
Q 023464 43 SPVTVCGDIH-G-----------QFHDLMKLFQTGGHVPETNYIFMGDFVDRG-YNSLEVFTILLL-----LK------- 97 (282)
Q Consensus 43 ~~i~vvGDiH-G-----------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~-----lk------- 97 (282)
++++.++|+| | ....|.++++.+.-..-+.+++.||++|+. +.+.+++.++.. |+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 4788999999 4 234455565555444458899999999985 445444443332 22
Q ss_pred -hcCchhH
Q 023464 98 -VYGFYDE 104 (282)
Q Consensus 98 -~~G~~ee 104 (282)
+.||||.
T Consensus 81 ~I~GNHD~ 88 (340)
T PHA02546 81 VLVGNHDM 88 (340)
T ss_pred EEccCCCc
Confidence 7899996
No 68
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.23 E-value=0.02 Score=46.77 Aligned_cols=124 Identities=24% Similarity=0.291 Sum_probs=81.9
Q ss_pred cceeecCCC--CHHHHHHHHHhCCCCCC-CceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhhcCCccccc
Q 023464 45 VTVCGDIHG--QFHDLMKLFQTGGHVPE-TNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRKYGNANAWR 116 (282)
Q Consensus 45 i~vvGDiHG--~~~~l~~il~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~~~~~~~~~ 116 (282)
+.|+||+|= +..+|-.-|+++-.|.+ .+++.+|++.- .|++++|..+. ++|-+|+- .+|
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlcs-----~e~~dylk~l~~dvhiVrGeFD~~-~~y------- 69 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLCS-----KESYDYLKTLSSDVHIVRGEFDEN-LKY------- 69 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcch-----HHHHHHHHhhCCCcEEEecccCcc-ccC-------
Confidence 578999983 44566566666556655 78999999764 49999988887 77877653 233
Q ss_pred cccchhcccceEEE--EeC-cEEEecCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCcccCCCCCeeeeC
Q 023464 117 YCTDVFDYLTLSAI--IDG-TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFG 193 (282)
Q Consensus 117 ~~~~~f~~LPl~~~--i~~-~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg 193 (282)
|..-+ ++. |+-||||-.--. |+||
T Consensus 70 ---------P~~kvvtvGqfkIG~chGhqViP--------------------------~gd~------------------ 96 (183)
T KOG3325|consen 70 ---------PENKVVTVGQFKIGLCHGHQVIP--------------------------WGDP------------------ 96 (183)
T ss_pred ---------CccceEEeccEEEEeecCcEeec--------------------------CCCH------------------
Confidence 22212 222 789999874322 3332
Q ss_pred hhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCC
Q 023464 194 SRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPN 237 (282)
Q Consensus 194 ~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~ 237 (282)
+++.-..+.+++|.++-|||...+.|+. - ++-.+.-.||+.
T Consensus 97 -~sL~~LaRqldvDILl~G~Th~f~Aye~-e-g~ffvnPGSaTG 137 (183)
T KOG3325|consen 97 -ESLALLARQLDVDILLTGHTHKFEAYEH-E-GKFFVNPGSATG 137 (183)
T ss_pred -HHHHHHHHhcCCcEEEeCCceeEEEEEe-C-CcEEeCCCcccC
Confidence 2344455667889999999998888866 2 444567777753
No 69
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.16 E-value=0.0067 Score=54.25 Aligned_cols=63 Identities=17% Similarity=0.121 Sum_probs=40.7
Q ss_pred CCcceeecCCC-C-----------HHHHHHHHHhCCCCCCCceeeecccccCCCChHHHH----HHHHHhh---------
Q 023464 43 SPVTVCGDIHG-Q-----------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF----TILLLLK--------- 97 (282)
Q Consensus 43 ~~i~vvGDiHG-~-----------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk--------- 97 (282)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 46889999993 2 234555555443344688999999999886554332 3333332
Q ss_pred hcCchhHH
Q 023464 98 VYGFYDEC 105 (282)
Q Consensus 98 ~~G~~ee~ 105 (282)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 78999963
No 70
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.12 E-value=0.018 Score=47.57 Aligned_cols=43 Identities=19% Similarity=-0.055 Sum_probs=24.7
Q ss_pred eeChhhHHHHHHhcCCcEEEecccccccceEEEecCCeEEEEec
Q 023464 191 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWS 234 (282)
Q Consensus 191 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifS 234 (282)
.+-+.....++++.+.++++-||..-..++.. ..+-.-+|+=|
T Consensus 108 ~l~H~p~~~~~~~~~~~~~l~GH~H~~~~~~~-~~~~~e~~~~~ 150 (156)
T cd08165 108 LLQHFPLYRLLQWLKPRLVLSGHTHSFCEVTH-PDGTPEVTVPS 150 (156)
T ss_pred eeeCChHHHHHHhhCCCEEEEcccCCCceeEE-ECCEEEEEEec
Confidence 34455555566777778999999975333333 21334455433
No 71
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.08 E-value=0.12 Score=46.74 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=20.3
Q ss_pred hhhHHHHHHhcCCcEEEeccccccc
Q 023464 194 SRVTSEFNHINNLDLVCRAHQLVQE 218 (282)
Q Consensus 194 ~~~~~~fl~~~~~~~iIrgH~~~~~ 218 (282)
.+.+.+.++++++++++-||.....
T Consensus 182 ~~~l~~ll~~~~v~~vl~GH~H~y~ 206 (294)
T cd00839 182 RAALEDLFYKYGVDLVLSGHVHAYE 206 (294)
T ss_pred HHHHHHHHHHhCCCEEEEccceeeE
Confidence 3467788899999999999997643
No 72
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.08 E-value=0.014 Score=44.40 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeee
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPV 41 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~ 41 (282)
+..|+++|+++..++...+..|+.++.++|+++|+++++
T Consensus 57 v~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 678999999999999999999999999999999999975
No 73
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.07 E-value=0.016 Score=50.94 Aligned_cols=64 Identities=16% Similarity=0.094 Sum_probs=40.0
Q ss_pred CCcceeecCC-CCHHHH----------------HHHHHhCCCCCCCceeeecccccCCCC---hHHHHHHHHHhh-----
Q 023464 43 SPVTVCGDIH-GQFHDL----------------MKLFQTGGHVPETNYIFMGDFVDRGYN---SLEVFTILLLLK----- 97 (282)
Q Consensus 43 ~~i~vvGDiH-G~~~~l----------------~~il~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~lk----- 97 (282)
.++.||+|+| |--..+ .++.+.......+.+|++||+++.... ..++..++..+.
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~~~v~~ 94 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTFRDLIL 94 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcCCcEEE
Confidence 6789999999 543322 222222223335889999999965443 334444555543
Q ss_pred hcCchhHHH
Q 023464 98 VYGFYDECQ 106 (282)
Q Consensus 98 ~~G~~ee~~ 106 (282)
+.||||.+.
T Consensus 95 V~GNHD~~~ 103 (225)
T TIGR00024 95 IRGNHDALI 103 (225)
T ss_pred ECCCCCCcc
Confidence 899999754
No 74
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=95.97 E-value=0.014 Score=48.90 Aligned_cols=51 Identities=20% Similarity=0.102 Sum_probs=28.6
Q ss_pred HHHHHHhCCCCCCCceeeecccccCCCCh--HHHHHH-HHHhh--------hcCchhHHHhh
Q 023464 58 LMKLFQTGGHVPETNYIFMGDFVDRGYNS--LEVFTI-LLLLK--------VYGFYDECQRK 108 (282)
Q Consensus 58 l~~il~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~-l~~lk--------~~G~~ee~~~~ 108 (282)
+.++.+.+...+.+.+|++||+++....+ .+.... +..+. +.||||.....
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~~~ 91 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGLPE 91 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccchhh
Confidence 34444443334468999999999865432 222111 12221 88999975443
No 75
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.58 E-value=0.023 Score=50.21 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=23.1
Q ss_pred ceeecCC--CCH---HHHHHHHHhC-CCC----CCCceeeecccccCC
Q 023464 46 TVCGDIH--GQF---HDLMKLFQTG-GHV----PETNYIFMGDFVDRG 83 (282)
Q Consensus 46 ~vvGDiH--G~~---~~l~~il~~~-~~~----~~~~~vfLGD~vDrG 83 (282)
++|+|+| +.. ..++.+++.+ +.. .-+.+|++||++|+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~ 49 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGI 49 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCccccc
Confidence 5799999 331 2223333332 222 237899999999973
No 76
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.47 E-value=0.076 Score=48.38 Aligned_cols=63 Identities=21% Similarity=0.180 Sum_probs=44.1
Q ss_pred CcceeecCCCCHHH--HHHHHHhCCCCCCCceeeecccccC--CCChHHHHHHHHHhh-------hcCchhHHH
Q 023464 44 PVTVCGDIHGQFHD--LMKLFQTGGHVPETNYIFMGDFVDR--GYNSLEVFTILLLLK-------VYGFYDECQ 106 (282)
Q Consensus 44 ~i~vvGDiHG~~~~--l~~il~~~~~~~~~~~vfLGD~vDr--G~~s~evl~~l~~lk-------~~G~~ee~~ 106 (282)
++.-++|+|-.... ..+.+........+-+++.|||+|+ -+..-.+...|..|+ +.||||...
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLGVFAVLGNHDYGV 119 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCCEEEEeccccccc
Confidence 58999999977665 2223333222233889999999995 456667777788887 889997643
No 77
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=95.08 E-value=0.027 Score=48.40 Aligned_cols=62 Identities=21% Similarity=0.200 Sum_probs=42.0
Q ss_pred CcceeecCC-CCH--------------HHHHHHHHhCCCCCCCceeeecccccCCCChHH----HHHHHHHhh-------
Q 023464 44 PVTVCGDIH-GQF--------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLE----VFTILLLLK------- 97 (282)
Q Consensus 44 ~i~vvGDiH-G~~--------------~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~e----vl~~l~~lk------- 97 (282)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+ +...+.+++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 478899999 322 246666666554456789999999998765433 444455552
Q ss_pred -hcCchhHH
Q 023464 98 -VYGFYDEC 105 (282)
Q Consensus 98 -~~G~~ee~ 105 (282)
+.||||..
T Consensus 81 ~~~GNHD~~ 89 (223)
T cd00840 81 IIAGNHDSP 89 (223)
T ss_pred EecCCCCCc
Confidence 78999963
No 78
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=94.92 E-value=0.033 Score=48.98 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=38.1
Q ss_pred cceeecCCCC---------H-----HHHHHHHHhCC--CCCCCceeeecccccCCCC--hHHHHHHHHHhh-----hcCc
Q 023464 45 VTVCGDIHGQ---------F-----HDLMKLFQTGG--HVPETNYIFMGDFVDRGYN--SLEVFTILLLLK-----VYGF 101 (282)
Q Consensus 45 i~vvGDiHG~---------~-----~~l~~il~~~~--~~~~~~~vfLGD~vDrG~~--s~evl~~l~~lk-----~~G~ 101 (282)
+++++|||-. + +.+.++.+... .++.|.+|+.||++++++. ..+.+.+|.++. +.||
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~~v~~V~GN 80 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDALPGTKVLLKGN 80 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5789999955 2 22233333211 2356889999999998763 335555555553 8899
Q ss_pred hhH
Q 023464 102 YDE 104 (282)
Q Consensus 102 ~ee 104 (282)
||.
T Consensus 81 HD~ 83 (232)
T cd07393 81 HDY 83 (232)
T ss_pred ccc
Confidence 995
No 79
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=94.81 E-value=0.045 Score=45.23 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=44.3
Q ss_pred CCCCceeeecccccCCCChHHHHHHHHHhh-----hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEec
Q 023464 68 VPETNYIFMGDFVDRGYNSLEVFTILLLLK-----VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 139 (282)
Q Consensus 68 ~~~~~~vfLGD~vDrG~~s~evl~~l~~lk-----~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vH 139 (282)
.|++.+++|||+.-.-.+..+...++-.|. +.||||.|-..|. ..|....+.|..+-. -+.+++.+|
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~IlerLnGrkhlv~GNhDk~~~~~~--~~~~~svq~f~~ie~---dg~~~~LsH 115 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILERLNGRKHLVPGNHDKCHPMYR--HAYFDSVQAFQRIEW---DGEDVYLSH 115 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHHcCCcEEEeeCCCCCCccccc--chhhHHHHHHHheeE---CCeEEEEEe
Confidence 467999999999976666666667776776 8999998876663 222333334433322 245677777
No 80
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=94.72 E-value=0.031 Score=49.36 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=43.1
Q ss_pred CcceeecCCCCH---------HHHHHHHHhCCCC-CCCceeeecccccCCCChH-----HHHHHHHHhh----hcCchhH
Q 023464 44 PVTVCGDIHGQF---------HDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSL-----EVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~~---------~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~-----evl~~l~~lk----~~G~~ee 104 (282)
+++.++|+||.+ ..+.++++...-. ++..++..||++++++.+- .++..+..+. ..||||-
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~d~~~~GNHe~ 81 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGYDAVTIGNHEF 81 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCCCEEeeccccc
Confidence 478899999876 5667777765433 3346678999999887643 5666665555 6799984
No 81
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=94.59 E-value=0.073 Score=44.68 Aligned_cols=35 Identities=14% Similarity=-0.000 Sum_probs=22.1
Q ss_pred HHHhcCCcEEEecccccccceEEEec----CCeEEEEecCC
Q 023464 200 FNHINNLDLVCRAHQLVQEGLKYMFQ----DKGLVTVWSAP 236 (282)
Q Consensus 200 fl~~~~~~~iIrgH~~~~~G~~~~~~----~~~~itifSa~ 236 (282)
.+++.+.++++.||+.- +.+.... +-..+||=|++
T Consensus 129 ~~~~~~~~~~lsGH~H~--~~~~~~~~~~~~~~ei~v~S~s 167 (171)
T cd07384 129 LLDTIKPVLILSGHDHD--QCEVVHSSKAGSVREITVKSFS 167 (171)
T ss_pred HHhccCceEEEeCcccC--CeEEEecCCCCCceEEeeccch
Confidence 45566779999999963 3455441 13457776664
No 82
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=94.19 E-value=0.044 Score=52.44 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=39.1
Q ss_pred CCcceeecCCCC--H------HH----HHHHHHhCCCCCCCceeeecccccCCCChHHHH----HHHHHhh--------h
Q 023464 43 SPVTVCGDIHGQ--F------HD----LMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF----TILLLLK--------V 98 (282)
Q Consensus 43 ~~i~vvGDiHG~--~------~~----l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk--------~ 98 (282)
++++.++|+|-. + .+ |.++++.+.....+.+|+.||++|++..+.+.. .++..|+ +
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 468889999932 1 11 334444443445688999999999986554332 2333333 7
Q ss_pred cCchhH
Q 023464 99 YGFYDE 104 (282)
Q Consensus 99 ~G~~ee 104 (282)
.||||.
T Consensus 81 ~GNHD~ 86 (407)
T PRK10966 81 AGNHDS 86 (407)
T ss_pred cCCCCC
Confidence 899995
No 83
>PLN02533 probable purple acid phosphatase
Probab=93.65 E-value=0.39 Score=46.30 Aligned_cols=24 Identities=21% Similarity=0.158 Sum_probs=20.3
Q ss_pred hhHHHHHHhcCCcEEEeccccccc
Q 023464 195 RVTSEFNHINNLDLVCRAHQLVQE 218 (282)
Q Consensus 195 ~~~~~fl~~~~~~~iIrgH~~~~~ 218 (282)
+.++.++.++++++++-||...-+
T Consensus 312 ~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 312 ESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHhCCcEEEecceeccc
Confidence 467888999999999999998643
No 84
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=93.05 E-value=0.081 Score=47.65 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=38.4
Q ss_pred CcceeecCCCCH----------------HHHHHHHHhCCCCCCCcee-eecccccCCCCh-----------HHHHHHHHH
Q 023464 44 PVTVCGDIHGQF----------------HDLMKLFQTGGHVPETNYI-FMGDFVDRGYNS-----------LEVFTILLL 95 (282)
Q Consensus 44 ~i~vvGDiHG~~----------------~~l~~il~~~~~~~~~~~v-fLGD~vDrG~~s-----------~evl~~l~~ 95 (282)
+++.++|+||.+ ..+..+++...-...+.++ ..||++++.+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 467889999986 3456666654432233333 379999876522 235566655
Q ss_pred hh----hcCchhH
Q 023464 96 LK----VYGFYDE 104 (282)
Q Consensus 96 lk----~~G~~ee 104 (282)
+. ..||||-
T Consensus 82 ~g~d~~~lGNHe~ 94 (277)
T cd07410 82 LGYDAGTLGNHEF 94 (277)
T ss_pred cCCCEEeecccCc
Confidence 55 7799984
No 85
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=93.03 E-value=0.12 Score=42.60 Aligned_cols=41 Identities=27% Similarity=0.551 Sum_probs=31.2
Q ss_pred ceeecCCCCHHHHHHHHHhCCCC--CCCceeeecccccCCCCh
Q 023464 46 TVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNS 86 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s 86 (282)
.|+||+||+++.+.+-++...-. +-+-++++||+..-...+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~ 43 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD 43 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch
Confidence 48999999999998777664322 347899999999755554
No 86
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=92.76 E-value=0.99 Score=40.47 Aligned_cols=24 Identities=0% Similarity=-0.054 Sum_probs=21.5
Q ss_pred eChhhHHHHHHhcCCcEEEecccc
Q 023464 192 FGSRVTSEFNHINNLDLVCRAHQL 215 (282)
Q Consensus 192 fg~~~~~~fl~~~~~~~iIrgH~~ 215 (282)
-.++..+..|++.+-.+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 577889999999999999999985
No 87
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=91.48 E-value=0.28 Score=43.76 Aligned_cols=26 Identities=15% Similarity=0.051 Sum_probs=21.8
Q ss_pred HHHHHHhcCCcEEEecccccccceEE
Q 023464 197 TSEFNHINNLDLVCRAHQLVQEGLKY 222 (282)
Q Consensus 197 ~~~fl~~~~~~~iIrgH~~~~~G~~~ 222 (282)
+.+.+++.++++++.||.....+...
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCccee
Confidence 77788899999999999998887333
No 88
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=91.27 E-value=0.3 Score=46.78 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=40.6
Q ss_pred CCcceeecCCCC------------HHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHH
Q 023464 43 SPVTVCGDIHGQ------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTI 92 (282)
Q Consensus 43 ~~i~vvGDiHG~------------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~ 92 (282)
+++..++|+|-. +..|.++++.+....-|-+|+.||++|++.-|.+++..
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~ 65 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQ 65 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHH
Confidence 578999999943 55778888887655668899999999999888777744
No 89
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.06 E-value=8.2 Score=34.68 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=31.3
Q ss_pred cEEEecccccccceEEEe-cCCeEEEEecCCCcccCCCCceEEEEEc-CCCceEEEEe
Q 023464 207 DLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFN-ENMEREVKFF 262 (282)
Q Consensus 207 ~~iIrgH~~~~~G~~~~~-~~~~~itifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 262 (282)
+..+.||++. .|.+..- .+++-+.+.|.|.+.. .+.++.++ ++++.+.+.|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 7788899986 4444422 2356677777887742 44455555 5677766654
No 90
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=89.78 E-value=0.36 Score=43.00 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=40.9
Q ss_pred CcceeecCCCC----------HHHHHHHHHhCCCCCCCceeeecccccCCCCh-----HHHHHHHHHhh----hcCchhH
Q 023464 44 PVTVCGDIHGQ----------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~----------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk----~~G~~ee 104 (282)
++.-+.|+||+ +..+..+++...-.+..-++..||.++..+.+ ..++..+-.+. ..||||.
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~d~~~~GNHef 81 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGYDAVTPGNHEF 81 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCCcEEccccccc
Confidence 46778999997 44566666665433456678899999876643 24445555554 6799984
No 91
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=89.78 E-value=0.37 Score=41.50 Aligned_cols=27 Identities=19% Similarity=0.143 Sum_probs=20.8
Q ss_pred hHHHHHHhcCCcEEEecccccccceEE
Q 023464 196 VTSEFNHINNLDLVCRAHQLVQEGLKY 222 (282)
Q Consensus 196 ~~~~fl~~~~~~~iIrgH~~~~~G~~~ 222 (282)
++.+..++...+.|.-||.....-+..
T Consensus 126 ~~~~~~~~~~p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 126 ALKHVVTDLDPDLIFSAHRHKSSIFMY 152 (195)
T ss_pred HHHHHHHhcCceEEEEcCccceeeEEe
Confidence 667777888999999999987554544
No 92
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=89.69 E-value=0.19 Score=44.19 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=33.3
Q ss_pred CCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHH
Q 023464 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF 90 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl 90 (282)
.++.+++|.||+++.+.++.+.+.....|-+||+||++-....+.|-.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~ 53 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYE 53 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHH
Confidence 458999999999999999999876666789999999996555554433
No 93
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=88.60 E-value=0.7 Score=43.73 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=43.9
Q ss_pred CCcceeecCCCC-------------HHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh------------
Q 023464 43 SPVTVCGDIHGQ-------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK------------ 97 (282)
Q Consensus 43 ~~i~vvGDiHG~-------------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk------------ 97 (282)
+|+..++|.|=. +.+|..+++.+....-|-+|.-||++|++.-|.+++..+...-
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 356777888844 3345555555544445889999999999988877776655443
Q ss_pred hcCchhH
Q 023464 98 VYGFYDE 104 (282)
Q Consensus 98 ~~G~~ee 104 (282)
+.||||.
T Consensus 81 I~GNHD~ 87 (390)
T COG0420 81 IAGNHDS 87 (390)
T ss_pred ecCCCCc
Confidence 7899996
No 94
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=88.03 E-value=0.77 Score=44.36 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeeec----CCcceeecCCCCHHHHHHHHHhCCCCC-CCceeeecccccCCCChHH
Q 023464 14 QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYNSLE 88 (282)
Q Consensus 14 ~~~~~~~~~~l~~~a~~il~~ep~l~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vfLGD~vDrG~~s~e 88 (282)
+.+...++..+++-+.+++..+|+...+. .-.+.++|.||.+.|+.++++.. |. ..-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 45777888899999999999999887663 23899999999999999998864 32 2559999999999999999
Q ss_pred HHHHHHHhh
Q 023464 89 VFTILLLLK 97 (282)
Q Consensus 89 vl~~l~~lk 97 (282)
.+..+...+
T Consensus 91 A~~~l~~~~ 99 (476)
T KOG0376|consen 91 ALLDLEKVK 99 (476)
T ss_pred HHHHHHHhh
Confidence 888887776
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=85.04 E-value=1.1 Score=40.77 Aligned_cols=61 Identities=16% Similarity=0.246 Sum_probs=41.3
Q ss_pred CcceeecCCCCHH--------------HHHHHHHhCCCC-CCCceeeecccccCCCC-h-----HHHHHHHHHhh----h
Q 023464 44 PVTVCGDIHGQFH--------------DLMKLFQTGGHV-PETNYIFMGDFVDRGYN-S-----LEVFTILLLLK----V 98 (282)
Q Consensus 44 ~i~vvGDiHG~~~--------------~l~~il~~~~~~-~~~~~vfLGD~vDrG~~-s-----~evl~~l~~lk----~ 98 (282)
+++.+.|+||++. .+..+++..... ++..++..||++.+.+. + ..++..+-+++ .
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~Da~t 81 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVDASA 81 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCeeee
Confidence 4678899998744 466666665432 34567779999987664 2 24666666666 6
Q ss_pred cCchhH
Q 023464 99 YGFYDE 104 (282)
Q Consensus 99 ~G~~ee 104 (282)
.||||.
T Consensus 82 ~GNHef 87 (288)
T cd07412 82 VGNHEF 87 (288)
T ss_pred eccccc
Confidence 799983
No 96
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=82.91 E-value=1.3 Score=39.68 Aligned_cols=50 Identities=14% Similarity=0.122 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCC-CCCc-eeeecccccCCCCh-----HHHHHHHHHhh---hcCchhH
Q 023464 55 FHDLMKLFQTGGHV-PETN-YIFMGDFVDRGYNS-----LEVFTILLLLK---VYGFYDE 104 (282)
Q Consensus 55 ~~~l~~il~~~~~~-~~~~-~vfLGD~vDrG~~s-----~evl~~l~~lk---~~G~~ee 104 (282)
+..+..+++...-. ..+. ++..||+++..+.+ ..++..+-.+. +.||||-
T Consensus 35 ~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~~g~da~~GNHef 94 (264)
T cd07411 35 FAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNALGVDAMVGHWEF 94 (264)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHhhCCeEEeccccc
Confidence 34455566654322 2333 45699999887643 35556666655 3399984
No 97
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.93 E-value=1.4 Score=47.94 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=40.0
Q ss_pred CcceeecCCCCH---HHHHHHHHhCCCCCCCce-eeecccccCCCCh-----HHHHHHHHHhh----hcCchhH
Q 023464 44 PVTVCGDIHGQF---HDLMKLFQTGGHVPETNY-IFMGDFVDRGYNS-----LEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 44 ~i~vvGDiHG~~---~~l~~il~~~~~~~~~~~-vfLGD~vDrG~~s-----~evl~~l~~lk----~~G~~ee 104 (282)
+++.+.|+||.+ ..+..+++...-...+.+ +..||++++.+.+ ..++..+-.+. ..||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGYDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCCCEEEeccccc
Confidence 488999999875 455555554432222334 4489999987644 35666666666 7899983
No 98
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=78.51 E-value=2.6 Score=38.12 Aligned_cols=61 Identities=16% Similarity=0.145 Sum_probs=37.4
Q ss_pred CcceeecCCCC---------------------HHHHHHHHHhCCCC-CCCceeeecccccCCCCh-----HHHHHHHHHh
Q 023464 44 PVTVCGDIHGQ---------------------FHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNS-----LEVFTILLLL 96 (282)
Q Consensus 44 ~i~vvGDiHG~---------------------~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s-----~evl~~l~~l 96 (282)
+++-++|+||+ +..+..+++...-. ++..++..||++.+.+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 35677888876 45556666654322 233455589999876532 3444555455
Q ss_pred h----hcCchhH
Q 023464 97 K----VYGFYDE 104 (282)
Q Consensus 97 k----~~G~~ee 104 (282)
. ..||||-
T Consensus 82 g~D~~~lGNHef 93 (281)
T cd07409 82 GYDAMTLGNHEF 93 (281)
T ss_pred CCCEEEeccccc
Confidence 5 6799984
No 99
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=77.93 E-value=6.6 Score=34.79 Aligned_cols=95 Identities=24% Similarity=0.289 Sum_probs=53.3
Q ss_pred cCCcceeecCCCCHHHHH----------------HHHHh-CCCCCCCceeeeccccc-CCC----ChHHHHHHHHHhh--
Q 023464 42 NSPVTVCGDIHGQFHDLM----------------KLFQT-GGHVPETNYIFMGDFVD-RGY----NSLEVFTILLLLK-- 97 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~~l~----------------~il~~-~~~~~~~~~vfLGD~vD-rG~----~s~evl~~l~~lk-- 97 (282)
..++.||.|+|=-+.... +.+.. ...-..+++|.+||.-- .+. ...++-.++..+.
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 468999999996665443 22221 11123578999999984 333 2344444444444
Q ss_pred ----hcCchhHHHhhcCCccccccccchhcccceEEEEeCcEEEecCCCCCC
Q 023464 98 ----VYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPD 145 (282)
Q Consensus 98 ----~~G~~ee~~~~~~~~~~~~~~~~~f~~LPl~~~i~~~~l~vHgGi~~~ 145 (282)
+.||||.....-.+ ..-.++.+++ . .++++++||--.+.
T Consensus 99 evi~i~GNHD~~i~~~~~----~~~v~v~~~~----~-i~~~~~~HGh~~~~ 141 (235)
T COG1407 99 EVIIIRGNHDNGIEEILP----GFNVEVVDEL----E-IGGLLFRHGHKEPE 141 (235)
T ss_pred cEEEEeccCCCccccccc----cCCceeeeeE----E-ecCEEEEeCCCCCc
Confidence 78999863322211 1111222332 2 45799999976553
No 100
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.64 E-value=3.2 Score=40.05 Aligned_cols=56 Identities=29% Similarity=0.449 Sum_probs=44.2
Q ss_pred cCCcceeecCCCCHHHHHHHHHhCCCC--CCCceeeecccccCCCChHHHHHHHHHhh
Q 023464 42 NSPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSLEVFTILLLLK 97 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk 97 (282)
+.+|.|+||.-|+++.|.+-.+..... |-+.++.+|++++--.++-|++.+...-+
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~ 62 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK 62 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc
Confidence 468999999999999997776665433 35889999999987667888888765554
No 101
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=73.45 E-value=3.8 Score=36.45 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHhCCCC-CCCceeeecccccCCCC-----hHHHHHHHHHhh----hcCchhH
Q 023464 52 HGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYN-----SLEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 52 HG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk----~~G~~ee 104 (282)
.|.+..+..++++..-. ++.-++..||++++++. ...++..+-.++ ..||||-
T Consensus 20 ~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~d~~~~GNHef 82 (257)
T cd07406 20 VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGVDLACFGNHEF 82 (257)
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCCcEEeeccccc
Confidence 35678888888875433 33467779999988753 346666666666 7899984
No 102
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=72.32 E-value=0.42 Score=45.17 Aligned_cols=177 Identities=14% Similarity=0.066 Sum_probs=93.9
Q ss_pred CCceeeecccccCCCChHHHHHHHHHhh---------hcCchhHH--Hhhc-----CC---ccccccccchhcccceEEE
Q 023464 70 ETNYIFMGDFVDRGYNSLEVFTILLLLK---------VYGFYDEC--QRKY-----GN---ANAWRYCTDVFDYLTLSAI 130 (282)
Q Consensus 70 ~~~~vfLGD~vDrG~~s~evl~~l~~lk---------~~G~~ee~--~~~~-----~~---~~~~~~~~~~f~~LPl~~~ 130 (282)
.-..|+++++.+++.++++.+.+-+..+ ..+.|+.. .+++ .+ -.+|+..++-++..+..++
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l~k~i 127 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSLEKTI 127 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcchhhhheeecccccCceEEEEeccCcCccceeeee
Confidence 3568999999999999999998877776 22333211 1111 11 2466778888888898876
Q ss_pred EeCcEEEecCCCCCCCCCHHHHHhhhccccCCC-CCC---ccccccCCCCCCCCcccCCCCCeeeeChh--hHHHHHHhc
Q 023464 131 IDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPH-EGP---FCDLMWSDPEDIETWAVSPRGAGWLFGSR--VTSEFNHIN 204 (282)
Q Consensus 131 i~~~~l~vHgGi~~~~~~l~~i~~i~r~~~~~~-~~~---~~~llWsdp~~~~~~~~~~rg~~~~fg~~--~~~~fl~~~ 204 (282)
.+ ++++.||+..|.......+..+.- ..+-+ ++. -..++-++-.....|... +....||.+ ..-++....
T Consensus 128 ~~-~il~~~~l~~Pht~hcla~g~v~v-s~lGd~~gn~kg~f~llD~~~~~k~tw~~~--~~~p~~gyDfwyqpr~~~mI 203 (476)
T KOG0918|consen 128 DP-DILEKTGLACPHTSHCLASGNVMV-SCLGDAEGNAKGGFLLLDSDFNEKGTWEKP--GHSPLFGYDFWYQPRHNVMI 203 (476)
T ss_pred ch-hhHhhcCCcCCcccccccCCCeeE-EeecccccCCcCCeEEecCccceecccccC--CCccccccceeeccccceEE
Confidence 55 999999999997654333221110 00000 111 111121111111133221 122222222 222233344
Q ss_pred CCcEEEecccccccceEEEe-cCCeEEEEecCCCcccCCCCceEEEEEcCC
Q 023464 205 NLDLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFNEN 254 (282)
Q Consensus 205 ~~~~iIrgH~~~~~G~~~~~-~~~~~itifSa~~y~~~~~n~~avl~i~~~ 254 (282)
..++..+.|.. .||...+ +++ .+.++..-|.-...+..+.+.++.+
T Consensus 204 stewgap~~~~--~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 204 STEWGAPNALR--KGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred eecccCchhhh--cCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 55555566653 4444322 244 6667776666555566777777765
No 103
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=70.39 E-value=5.5 Score=35.42 Aligned_cols=24 Identities=8% Similarity=-0.045 Sum_probs=20.0
Q ss_pred hhHHHHHHhcCCcEEEeccccccc
Q 023464 195 RVTSEFNHINNLDLVCRAHQLVQE 218 (282)
Q Consensus 195 ~~~~~fl~~~~~~~iIrgH~~~~~ 218 (282)
+.+.++++++++++++-||.....
T Consensus 191 ~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 191 DRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHcCCCEEEeCCcccce
Confidence 467788999999999999997644
No 104
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=66.25 E-value=7.5 Score=35.10 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=46.7
Q ss_pred CCcceeecCCCC--HHHHHHHHHhCCCC-CCCceeeecccccCC-CChHHHHHHHHHhh----hcCchhH
Q 023464 43 SPVTVCGDIHGQ--FHDLMKLFQTGGHV-PETNYIFMGDFVDRG-YNSLEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 43 ~~i~vvGDiHG~--~~~l~~il~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~lk----~~G~~ee 104 (282)
+++.++|||=|. ...+...|..+... +.+-.|..||....| .-+-++...|..+. ..|||.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvDviT~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVNYITMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCCEEEccchhc
Confidence 478999999999 56667777765433 235667789999766 46788889888887 5699963
No 105
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=66.20 E-value=4 Score=39.49 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=32.1
Q ss_pred ChhhHHHHHHhcCCc----EEEeccccccc--ceEEEecCCeEEEEecC
Q 023464 193 GSRVTSEFNHINNLD----LVCRAHQLVQE--GLKYMFQDKGLVTVWSA 235 (282)
Q Consensus 193 g~~~~~~fl~~~~~~----~iIrgH~~~~~--G~~~~~~~~~~itifSa 235 (282)
.++...+.++..|++ .||.||+|+.+ |-...-+|||++-|..+
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGG 562 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGG 562 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCc
Confidence 345677888888887 89999999864 44444469999999554
No 106
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=65.74 E-value=4.1 Score=34.98 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=27.0
Q ss_pred ecCCCCHHHHHHHHHhCCCC-CCCceeeecccccCCCC
Q 023464 49 GDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYN 85 (282)
Q Consensus 49 GDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~ 85 (282)
=|++|+=.=|.++++.+-.. .-+.++||||++|.|--
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~ 60 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWI 60 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcc
Confidence 36677777778887765433 35889999999998743
No 107
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=63.53 E-value=5.7 Score=39.14 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=41.2
Q ss_pred CCcceeecCCCCHH---------------HHHHHHHhCCCC-CCCceeeecccccCCC------ChHHHHHHHHHhh---
Q 023464 43 SPVTVCGDIHGQFH---------------DLMKLFQTGGHV-PETNYIFMGDFVDRGY------NSLEVFTILLLLK--- 97 (282)
Q Consensus 43 ~~i~vvGDiHG~~~---------------~l~~il~~~~~~-~~~~~vfLGD~vDrG~------~s~evl~~l~~lk--- 97 (282)
-+++-+.|+||.+. ....+++...-. ++..+|=.||++++.+ ....++.+|-.++
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yDa 106 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYDA 106 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCcE
Confidence 46889999999998 333333332211 2344666899999844 3456777777777
Q ss_pred -hcCchhH
Q 023464 98 -VYGFYDE 104 (282)
Q Consensus 98 -~~G~~ee 104 (282)
..||||-
T Consensus 107 ~tiGNHEF 114 (517)
T COG0737 107 MTLGNHEF 114 (517)
T ss_pred Eeeccccc
Confidence 7899984
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=62.80 E-value=5.5 Score=36.18 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=35.8
Q ss_pred CcceeecCCCCHH----------------HHHHHHHh-CCC-CCCCceeeecccccCCCCh-------HHHHHHHHHhh-
Q 023464 44 PVTVCGDIHGQFH----------------DLMKLFQT-GGH-VPETNYIFMGDFVDRGYNS-------LEVFTILLLLK- 97 (282)
Q Consensus 44 ~i~vvGDiHG~~~----------------~l~~il~~-~~~-~~~~~~vfLGD~vDrG~~s-------~evl~~l~~lk- 97 (282)
+|+-+.|+||.+. .+.+.++. ... .++..++..||.+.+-+.+ .-++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 4788899998753 22222322 111 1223456689999765433 23455555555
Q ss_pred ---hcCchhH
Q 023464 98 ---VYGFYDE 104 (282)
Q Consensus 98 ---~~G~~ee 104 (282)
..||||.
T Consensus 87 Da~tlGNHEF 96 (282)
T cd07407 87 DLLTIGNHEL 96 (282)
T ss_pred cEEeeccccc
Confidence 7899986
No 109
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=60.17 E-value=10 Score=35.71 Aligned_cols=38 Identities=24% Similarity=0.441 Sum_probs=30.3
Q ss_pred CCcceeecCCCCHHHHHHHH---HhCCCCCCCceeeecccc
Q 023464 43 SPVTVCGDIHGQFHDLMKLF---QTGGHVPETNYIFMGDFV 80 (282)
Q Consensus 43 ~~i~vvGDiHG~~~~l~~il---~~~~~~~~~~~vfLGD~v 80 (282)
+||.|=|=-||+++.+-+-+ ++.|-.+-|.++.+||+=
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQ 41 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQ 41 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchH
Confidence 57889999999999997544 444555678999999985
No 110
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=60.09 E-value=8 Score=37.04 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=19.2
Q ss_pred HHHHHHhCCCC-CCCceeeecccccCCCCh
Q 023464 58 LMKLFQTGGHV-PETNYIFMGDFVDRGYNS 86 (282)
Q Consensus 58 l~~il~~~~~~-~~~~~vfLGD~vDrG~~s 86 (282)
|.+.++..-+. ..+..+||||++|-|...
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~ 110 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWA 110 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccC
Confidence 34444443333 347899999999988754
No 111
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=59.28 E-value=18 Score=31.62 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=28.7
Q ss_pred HHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcc
Q 023464 199 EFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 239 (282)
Q Consensus 199 ~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 239 (282)
+.+-..|+|.||-||+.+..+++. + ++++| +||--|+.
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~-~-~~~~I-~YslGNfi 236 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEI-Y-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEE-E-CCEEE-EEcccccc
Confidence 334346999999999999999987 6 67755 78875553
No 112
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=58.60 E-value=7.7 Score=42.26 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=38.8
Q ss_pred CCcceeecCCCCHH----------------HHHHHHHhCCCC-CCCceeeecccccCCCC--------------hHHHHH
Q 023464 43 SPVTVCGDIHGQFH----------------DLMKLFQTGGHV-PETNYIFMGDFVDRGYN--------------SLEVFT 91 (282)
Q Consensus 43 ~~i~vvGDiHG~~~----------------~l~~il~~~~~~-~~~~~vfLGD~vDrG~~--------------s~evl~ 91 (282)
-+|+.+.|+||++. .+..+++.+.-. ++..+|-.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 35899999999863 344455543322 23344458999987652 224555
Q ss_pred HHHHhh----hcCchhH
Q 023464 92 ILLLLK----VYGFYDE 104 (282)
Q Consensus 92 ~l~~lk----~~G~~ee 104 (282)
.+-.++ ..||||.
T Consensus 122 ~mN~lgyDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGYDAGTLGNHEF 138 (1163)
T ss_pred HHhhcCccEEeeccccc
Confidence 555565 7899984
No 113
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=56.63 E-value=10 Score=34.91 Aligned_cols=60 Identities=17% Similarity=0.020 Sum_probs=38.0
Q ss_pred cceeecCCCCH------HHHHHHHHhCCC-----CCCCceeeecccccCCCC-------------hHHHHHHHHHhh---
Q 023464 45 VTVCGDIHGQF------HDLMKLFQTGGH-----VPETNYIFMGDFVDRGYN-------------SLEVFTILLLLK--- 97 (282)
Q Consensus 45 i~vvGDiHG~~------~~l~~il~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk--- 97 (282)
++-+.|+||++ ..+..+++.... .++..++.-||.+..++. ..-++.++-+++
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~Da 82 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQA 82 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCcE
Confidence 55678999985 344444444321 234467778999976553 345566666666
Q ss_pred -hcCchhH
Q 023464 98 -VYGFYDE 104 (282)
Q Consensus 98 -~~G~~ee 104 (282)
..||||.
T Consensus 83 ~tlGNHEF 90 (313)
T cd08162 83 IALGNHEF 90 (313)
T ss_pred Eecccccc
Confidence 6899984
No 114
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=56.34 E-value=8.9 Score=38.56 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=26.9
Q ss_pred CceeeecccccCCCChHHHHHHHHHhh----hcCchh
Q 023464 71 TNYIFMGDFVDRGYNSLEVFTILLLLK----VYGFYD 103 (282)
Q Consensus 71 ~~~vfLGD~vDrG~~s~evl~~l~~lk----~~G~~e 103 (282)
+++-.+||+.||||.+-.+++.|+..- -.||||
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~hsvDIQWGNHD 222 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYHSVDIQWGNHD 222 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCCCccccccchH
Confidence 356669999999999999999999876 445554
No 115
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=55.27 E-value=12 Score=38.29 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=41.6
Q ss_pred cCCcceeecCCCCHH----------------HHHHHHHhCCC-CCCCceeeecccccCCCChH-------------HHHH
Q 023464 42 NSPVTVCGDIHGQFH----------------DLMKLFQTGGH-VPETNYIFMGDFVDRGYNSL-------------EVFT 91 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~----------------~l~~il~~~~~-~~~~~~vfLGD~vDrG~~s~-------------evl~ 91 (282)
+-+|.-..|+||++. .+..+++.+.- -++..+|-.||.+...|.+- -++.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~ 104 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYK 104 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHH
Confidence 456889999999863 33444444321 13456777999998766431 3566
Q ss_pred HHHHhh----hcCchhH
Q 023464 92 ILLLLK----VYGFYDE 104 (282)
Q Consensus 92 ~l~~lk----~~G~~ee 104 (282)
.+-.++ ..||||.
T Consensus 105 amN~lgyDa~tlGNHEF 121 (649)
T PRK09420 105 AMNTLDYDVGNLGNHEF 121 (649)
T ss_pred HHHhcCCcEEeccchhh
Confidence 666666 7899984
No 116
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=53.90 E-value=1.1e+02 Score=26.30 Aligned_cols=37 Identities=24% Similarity=0.160 Sum_probs=27.9
Q ss_pred CCCCceeeeccccc--CCCChHHHHHHHHHhh-----hcCchhH
Q 023464 68 VPETNYIFMGDFVD--RGYNSLEVFTILLLLK-----VYGFYDE 104 (282)
Q Consensus 68 ~~~~~~vfLGD~vD--rG~~s~evl~~l~~lk-----~~G~~ee 104 (282)
.+++.++.-||+-- |=+...+-+.++-+|- ++||||-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG~K~m~rGNHDY 85 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDLPGTKYMIRGNHDY 85 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcCCCcEEEEecCCcc
Confidence 34677777899873 5566777788887776 8999986
No 117
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=53.79 E-value=9.5 Score=34.54 Aligned_cols=61 Identities=18% Similarity=0.061 Sum_probs=35.4
Q ss_pred CcceeecCCCCHH----------HHHHHHHhCCC-----CCCCceeeecccccCCCCh-----HHHHHHHHHhh----hc
Q 023464 44 PVTVCGDIHGQFH----------DLMKLFQTGGH-----VPETNYIFMGDFVDRGYNS-----LEVFTILLLLK----VY 99 (282)
Q Consensus 44 ~i~vvGDiHG~~~----------~l~~il~~~~~-----~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk----~~ 99 (282)
.|+.+.|+||++. .+..+++.... .++..++-.||.+...+.+ .-++..+-.++ ..
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~Da~~~ 81 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAV 81 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCcEEee
Confidence 3667889999752 24444443321 2334566689998443322 33445555555 67
Q ss_pred CchhH
Q 023464 100 GFYDE 104 (282)
Q Consensus 100 G~~ee 104 (282)
||||-
T Consensus 82 GNHEf 86 (285)
T cd07405 82 GNHEF 86 (285)
T ss_pred ccccc
Confidence 99984
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=53.61 E-value=11 Score=38.22 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=39.3
Q ss_pred CcceeecCCCCHH----------------HHHHHHHhCCCC-CCCceeeecccccCCCCh-------------HHHHHHH
Q 023464 44 PVTVCGDIHGQFH----------------DLMKLFQTGGHV-PETNYIFMGDFVDRGYNS-------------LEVFTIL 93 (282)
Q Consensus 44 ~i~vvGDiHG~~~----------------~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~l 93 (282)
+|+-..|+||++. .+..+++.+.-. ++..+|-.||.+...+.+ .-++..+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 5777899999864 344455443211 345577789999866543 2356666
Q ss_pred HHhh----hcCchhH
Q 023464 94 LLLK----VYGFYDE 104 (282)
Q Consensus 94 ~~lk----~~G~~ee 104 (282)
-.|+ ..||||.
T Consensus 84 N~lgyDa~tlGNHEF 98 (626)
T TIGR01390 84 NLLKYDVGNLGNHEF 98 (626)
T ss_pred hhcCccEEecccccc
Confidence 6666 7899984
No 119
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=51.41 E-value=18 Score=32.59 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=25.3
Q ss_pred cceeecCCCC---HHHHHHHHHhCCC--CCCCceeeecccccCCCC
Q 023464 45 VTVCGDIHGQ---FHDLMKLFQTGGH--VPETNYIFMGDFVDRGYN 85 (282)
Q Consensus 45 i~vvGDiHG~---~~~l~~il~~~~~--~~~~~~vfLGD~vDrG~~ 85 (282)
.--.|+-. | ...+..+++.+.- ++-+-+|+.||+++.+..
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~ 84 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVD 84 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCch
Confidence 34455554 3 3455666665432 355889999999988764
No 120
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=45.82 E-value=27 Score=29.65 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=25.8
Q ss_pred cceeecCCCC-----HHHHHHHHHhCC-CCCCCceeeecccccCC
Q 023464 45 VTVCGDIHGQ-----FHDLMKLFQTGG-HVPETNYIFMGDFVDRG 83 (282)
Q Consensus 45 i~vvGDiHG~-----~~~l~~il~~~~-~~~~~~~vfLGD~vDrG 83 (282)
|++++|+|=. ++.|.++|+.+. ...-+.+|++|+++|.-
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~ 45 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSP 45 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTT
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcc
Confidence 3566666654 667777887766 44457899999999963
No 121
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=43.84 E-value=3.3e+02 Score=26.82 Aligned_cols=52 Identities=15% Similarity=0.034 Sum_probs=33.6
Q ss_pred cEEEecccccccceEEEecCCeEEEEecCCCcccCCCCceEEEEEcC-CCceEEEEeec
Q 023464 207 DLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMEREVKFFTE 264 (282)
Q Consensus 207 ~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~ 264 (282)
+.++.||++. .|+.... +.+++..+|.+.... .+-++.|+. -+...+..+..
T Consensus 420 Dv~~~Ghvh~-~g~~~y~-gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 420 DVFHTGHVHK-FGTGVYE-GVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred cEEEEccccc-cceeEEe-ccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 8899999997 7887755 678888888876542 233444543 24444444443
No 122
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=43.61 E-value=21 Score=33.49 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=37.0
Q ss_pred HHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecC-CCcccCC-C---CceEEEEEcCCCceEEEEeeccC
Q 023464 197 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSA-PNYCYRC-G---NVASILSFNENMEREVKFFTETE 266 (282)
Q Consensus 197 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa-~~y~~~~-~---n~~avl~i~~~~~~~~~~~~~~~ 266 (282)
+..+-++.+++.+..||+.+.+ |.-.. .+++..=|.. ..|.+.. + .++=|++++.... .++.++-..
T Consensus 291 ~~~L~~r~~Vk~vf~GHdHvND-fC~~~-k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~~-~IkTWKRl~ 362 (379)
T KOG1432|consen 291 LTTLVNRGNVKGVFCGHDHVND-FCGEL-KGELWLCYGGGAGYGGYGIGGWERRARVFELDLNKD-RIKTWKRLD 362 (379)
T ss_pred HHHHHhccCcceEEeccccccc-eeccc-CCeEEEEecCCCccCCcCcCCcccceEEEEcccccc-ccceeeecC
Confidence 3333448899999999999854 44445 5554444443 3343211 1 1344777764332 355555443
No 123
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=39.52 E-value=50 Score=28.70 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=29.0
Q ss_pred HHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCc
Q 023464 197 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 238 (282)
Q Consensus 197 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y 238 (282)
+.+.+-..|+|.||-||+.+..+++. + +++ +..||.-|+
T Consensus 199 la~~l~~~G~D~IiG~H~Hv~q~~E~-~-~~~-~I~YSlGNf 237 (239)
T cd07381 199 LARALIDAGADLVIGHHPHVLQGIEI-Y-KGK-LIFYSLGNF 237 (239)
T ss_pred HHHHHHHCCCCEEEcCCCCcCCCeEE-E-CCE-EEEEcCCCc
Confidence 33344456999999999999999988 6 666 556887554
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=37.24 E-value=34 Score=35.94 Aligned_cols=62 Identities=15% Similarity=0.146 Sum_probs=39.6
Q ss_pred CCcceeecCCCCHH----------------HHHHHHHhCCC-CCCCceeeecccccCCCCh--------------HHHHH
Q 023464 43 SPVTVCGDIHGQFH----------------DLMKLFQTGGH-VPETNYIFMGDFVDRGYNS--------------LEVFT 91 (282)
Q Consensus 43 ~~i~vvGDiHG~~~----------------~l~~il~~~~~-~~~~~~vfLGD~vDrG~~s--------------~evl~ 91 (282)
-+|+-..|+||++. .+..+++.+.- -++..+|-.||.+-..|.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 35888999999964 23333443321 1344577789999765432 13677
Q ss_pred HHHHhh----hcCchhH
Q 023464 92 ILLLLK----VYGFYDE 104 (282)
Q Consensus 92 ~l~~lk----~~G~~ee 104 (282)
.+-.|+ ..||||.
T Consensus 196 amN~LGyDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALGFDAGTLGNHEF 212 (814)
T ss_pred HHhccCCCEEEechhhc
Confidence 777777 7899984
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=37.10 E-value=39 Score=33.67 Aligned_cols=49 Identities=8% Similarity=-0.097 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCC-CCCCceeeecccccCCCCh-----HHHHHHHHHhh----hcCchhH
Q 023464 56 HDLMKLFQTGGH-VPETNYIFMGDFVDRGYNS-----LEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 56 ~~l~~il~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk----~~G~~ee 104 (282)
..+..+++...- .++..++.-||.+...+.+ ..++.++-+++ ..||||.
T Consensus 35 a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g~Da~~lGNHEF 93 (550)
T TIGR01530 35 AALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAGFDFFTLGNHEF 93 (550)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccCCCEEEeccccc
Confidence 334444554321 2345677789999765433 33455555555 7899984
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=34.48 E-value=35 Score=33.90 Aligned_cols=62 Identities=18% Similarity=0.070 Sum_probs=37.4
Q ss_pred CCcceeecCCCCHH----------HHHHHHHhCC-----CCCCCceeeecccccCCCCh-----HHHHHHHHHhh----h
Q 023464 43 SPVTVCGDIHGQFH----------DLMKLFQTGG-----HVPETNYIFMGDFVDRGYNS-----LEVFTILLLLK----V 98 (282)
Q Consensus 43 ~~i~vvGDiHG~~~----------~l~~il~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk----~ 98 (282)
-.++-+.|+||++. .+..+++... ..++..++.-||.+...+.+ .-++.++-.+. .
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~Da~t 114 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYDAMA 114 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCCEEc
Confidence 35888999999864 2333444322 12344577789998654332 23455555555 7
Q ss_pred cCchhH
Q 023464 99 YGFYDE 104 (282)
Q Consensus 99 ~G~~ee 104 (282)
.||||.
T Consensus 115 lGNHEF 120 (551)
T PRK09558 115 VGNHEF 120 (551)
T ss_pred cccccc
Confidence 799984
No 127
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=33.87 E-value=2.9e+02 Score=23.42 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeecCCCCHHHHHHHHHhCCCCC------------------------
Q 023464 14 QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP------------------------ 69 (282)
Q Consensus 14 ~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~------------------------ 69 (282)
..++++++..-+.++.+.+.++..= ...++||=++|++.=+-.+++...++.
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~k 85 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILK 85 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEec
Confidence 4589999999999988877766432 568899999999988877777655441
Q ss_pred -------CCceeeecccccCCCChHHHHHH
Q 023464 70 -------ETNYIFMGDFVDRGYNSLEVFTI 92 (282)
Q Consensus 70 -------~~~~vfLGD~vDrG~~s~evl~~ 92 (282)
...++.+=|++|-|.-=-.+..+
T Consensus 86 Dld~di~grdVLiVeDIiDsG~TLs~i~~~ 115 (178)
T COG0634 86 DLDEDIKGRDVLIVEDIIDSGLTLSKVRDL 115 (178)
T ss_pred ccccCCCCCeEEEEecccccChhHHHHHHH
Confidence 24588889999987543333333
No 128
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=33.67 E-value=52 Score=29.46 Aligned_cols=60 Identities=17% Similarity=0.063 Sum_probs=42.9
Q ss_pred CcceeecCCCCHHH--HHHHHHhCCCC-CCCceeeecccccCC-CChHHHHHHHHHhh----hcCchh
Q 023464 44 PVTVCGDIHGQFHD--LMKLFQTGGHV-PETNYIFMGDFVDRG-YNSLEVFTILLLLK----VYGFYD 103 (282)
Q Consensus 44 ~i~vvGDiHG~~~~--l~~il~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~lk----~~G~~e 103 (282)
++..||||=|.... +.+.|...... +.+-.|-.||..-.| .-+-++...|..+. ..|||+
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D~iTlGNH~ 68 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVDVITMGNHT 68 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCCEEEecccc
Confidence 47899999998654 35555554322 235566689998766 47788888888888 679996
No 129
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=32.04 E-value=90 Score=27.41 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=30.4
Q ss_pred HHHHHHhcCCcEEEecccccccceEEEecCCeEEEEecCCCcc
Q 023464 197 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 239 (282)
Q Consensus 197 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 239 (282)
+.+.+-..|+|+||-+|..+..|++. + +++ +.+||.-|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~-y-~~~-~I~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEI-Y-KGK-PIFYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEE-E-CCE-EEEEeCcccc
Confidence 44445557999999999999999998 6 666 5578876553
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=31.18 E-value=78 Score=31.61 Aligned_cols=55 Identities=16% Similarity=0.153 Sum_probs=41.0
Q ss_pred CCcceeecCCC------------CHHHHHHHHHhCCCCCCCceeeecccccCCCChHHHHHHHHHhh
Q 023464 43 SPVTVCGDIHG------------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK 97 (282)
Q Consensus 43 ~~i~vvGDiHG------------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk 97 (282)
.+|.|-.|.|= .+..|+.+|..+.-..-+-++.=||++.-..-|.+++...+.|-
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lL 80 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELL 80 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHH
Confidence 46788888883 46688999998876666788888999987777777666544443
No 131
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=30.23 E-value=23 Score=34.47 Aligned_cols=26 Identities=23% Similarity=0.391 Sum_probs=22.6
Q ss_pred ceeeecccccCCCChHHHHHHHHHhh
Q 023464 72 NYIFMGDFVDRGYNSLEVFTILLLLK 97 (282)
Q Consensus 72 ~~vfLGD~vDrG~~s~evl~~l~~lk 97 (282)
++=.+||+-||||++-.+++.|...-
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~yh 218 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINYH 218 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhcc
Confidence 45569999999999999999988776
No 132
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.62 E-value=1.8e+02 Score=24.06 Aligned_cols=52 Identities=21% Similarity=0.356 Sum_probs=38.2
Q ss_pred ceeecCCCCHHHHHHHHHh-CCC------------CCCCceeeecccccCCCChHHHHHHHHHhh
Q 023464 46 TVCGDIHGQFHDLMKLFQT-GGH------------VPETNYIFMGDFVDRGYNSLEVFTILLLLK 97 (282)
Q Consensus 46 ~vvGDiHG~~~~l~~il~~-~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk 97 (282)
++..-.+||-..+-+.+.. ++. ..+-.+||+|=.+|+|.-.-++..+|-.|+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 4555667777777554432 322 123579999999999999999999999988
No 133
>TIGR01201 HU_rel DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe.
Probab=29.13 E-value=81 Score=25.57 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=25.8
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 023464 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (282)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~ 33 (282)
|+.+++++++.+...++..++..++++..+++.
T Consensus 31 mt~~el~~~Ia~~s~~s~~dv~~vl~~l~~~i~ 63 (145)
T TIGR01201 31 IDFEEIAELIAEESSLSPGDVKGIIDRLAYVLR 63 (145)
T ss_pred cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 467788888888888888888888877766654
No 134
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=28.77 E-value=1.1e+02 Score=22.00 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=26.4
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 023464 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (282)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~ 33 (282)
|+-.++++.+....-++..++..+++...+++.
T Consensus 1 mtk~eli~~ia~~~~~~~~~v~~vl~~l~~~i~ 33 (90)
T smart00411 1 MTKSELIDAIAEKAGLSKKDAKAAVDAFLEIIT 33 (90)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 567889999988888999988888877666553
No 135
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=25.23 E-value=1.3e+02 Score=20.30 Aligned_cols=31 Identities=13% Similarity=0.033 Sum_probs=23.2
Q ss_pred cCCeEEEEecCCCcccCCCCceEEEEEcCCCce
Q 023464 225 QDKGLVTVWSAPNYCYRCGNVASILSFNENMER 257 (282)
Q Consensus 225 ~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~ 257 (282)
++||++...+..+.. ..+..+++++..++..
T Consensus 10 ~DGkIlv~G~~~~~~--~~~~~~l~Rln~DGsL 40 (55)
T TIGR02608 10 SDGKILVAGYVDNSS--GNNDFVLARLNADGSL 40 (55)
T ss_pred CCCcEEEEEEeecCC--CcccEEEEEECCCCCc
Confidence 489999988776542 3567789999988764
No 136
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=25.05 E-value=93 Score=26.99 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=25.0
Q ss_pred eeChhhHHHHHHhcCCcEEEecccccccc
Q 023464 191 LFGSRVTSEFNHINNLDLVCRAHQLVQEG 219 (282)
Q Consensus 191 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 219 (282)
.+|...+.+++++.+++.+|.||......
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 56778999999999999999999987643
No 137
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=24.63 E-value=69 Score=33.54 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=38.9
Q ss_pred cCCcceeecCCCCHHH----------------HHHHHHhCCC-CCCCceeeecccccCCCCh------------------
Q 023464 42 NSPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNS------------------ 86 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~~----------------l~~il~~~~~-~~~~~~vfLGD~vDrG~~s------------------ 86 (282)
+-+|+-..|+||++.. +..++++..- .++..+|-.||.+-..+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3468999999999632 3334443321 1345677789988543322
Q ss_pred -HHHHHHHHHhh----hcCchhH
Q 023464 87 -LEVFTILLLLK----VYGFYDE 104 (282)
Q Consensus 87 -~evl~~l~~lk----~~G~~ee 104 (282)
.-++.++-.|+ ..||||.
T Consensus 119 ~~p~i~~mN~lgyDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKYDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCCCEEecccccc
Confidence 24666666666 7899984
No 138
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=22.35 E-value=63 Score=29.59 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=28.9
Q ss_pred CCcceeecCCC----CHHHHHHHHHhCC-CCC----CCceeeecccccC
Q 023464 43 SPVTVCGDIHG----QFHDLMKLFQTGG-HVP----ETNYIFMGDFVDR 82 (282)
Q Consensus 43 ~~i~vvGDiHG----~~~~l~~il~~~~-~~~----~~~~vfLGD~vDr 82 (282)
..++|.||+|= .++.|.++|..+. ..+ ..-+|+.|+++-+
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~ 76 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISL 76 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCC
Confidence 35889999994 4667777887762 222 2468999999966
No 139
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.15 E-value=20 Score=28.29 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=22.7
Q ss_pred cceeecCCC------CHHHHHHHHHhCCCCCCCceeeecccccCCC
Q 023464 45 VTVCGDIHG------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGY 84 (282)
Q Consensus 45 i~vvGDiHG------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~ 84 (282)
..-+||.|| +.+++....+ +-++.+|||.|+|.
T Consensus 23 ~~yi~~~~g~~~~~~d~dsfeE~kn-------df~~ll~~lld~G~ 61 (122)
T COG3792 23 WNYIGDAYGLSSGQRDPDSFEERKN-------DFFFLLGDLLDEGK 61 (122)
T ss_pred HHHHHHHhCCccccCChhhHHHHHH-------HHHHHHHHHhcCCe
Confidence 344678888 6777766655 34677899998863
No 140
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=21.83 E-value=2.4e+02 Score=18.50 Aligned_cols=31 Identities=29% Similarity=0.367 Sum_probs=23.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIE 34 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~ 34 (282)
++.+++++.++. ++-++...+.+++..+++.
T Consensus 8 Le~Iv~~Le~~~-~sLdes~~lyeeg~~l~~~ 38 (53)
T PF02609_consen 8 LEEIVEKLESGE-LSLDESLKLYEEGMELIKK 38 (53)
T ss_dssp HHHHHHHHHTT--S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHH
Confidence 677888888765 8888999999888887653
No 141
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=21.29 E-value=3.3e+02 Score=20.08 Aligned_cols=80 Identities=16% Similarity=0.056 Sum_probs=44.0
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCC-----cceeecCCCCHHHHHHHHHhCCCCCCCceeeeccccc
Q 023464 7 IAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP-----VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (282)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~~a~~il~~ep~l~~~~~~-----i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 81 (282)
++.......++.+++.+++++. .+..++.+..+ -.|-|=+|=-+..|...+...+..++..+|+. +.
T Consensus 3 ~~~~~~~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~ 74 (109)
T cd01533 3 VEAVRHTPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CA 74 (109)
T ss_pred ccccccCCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CC
Confidence 3444455667777777665421 11245566432 23344445466677766666654444556664 56
Q ss_pred CCCChHHHHHHHH
Q 023464 82 RGYNSLEVFTILL 94 (282)
Q Consensus 82 rG~~s~evl~~l~ 94 (282)
.|..|......|.
T Consensus 75 ~G~rs~~a~~~L~ 87 (109)
T cd01533 75 GRTRSIIGAQSLI 87 (109)
T ss_pred CCchHHHHHHHHH
Confidence 7777766655443
No 142
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.28 E-value=59 Score=30.30 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=35.6
Q ss_pred HhhCCCeeeecCCcceeecCC-CCHHHHHHHHHhCCCCCCCceeeeccccc--CCCChHHHHHHHHHhh
Q 023464 32 LIEESNVQPVNSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIFMGDFVD--RGYNSLEVFTILLLLK 97 (282)
Q Consensus 32 l~~ep~l~~~~~~i~vvGDiH-G~~~~l~~il~~~~~~~~~~~vfLGD~vD--rG~~s~evl~~l~~lk 97 (282)
+++-|-.++-.+.+.++||.| |||.++... ....++-+-|+=. -|+....++.+..+|.
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~-------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARNS-------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhccC-------CCceEEEecccchhhccchHHHHHHHHHHHH
Confidence 444554555567799999999 777665421 1122333444321 2677778888888877
No 143
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=21.17 E-value=1.4e+02 Score=20.41 Aligned_cols=26 Identities=15% Similarity=0.437 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 023464 3 LDQWIAKVKEGQHLLEDELQLLCEYV 28 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~a 28 (282)
+.++++++.++..++.+++..+++..
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 56789999999999999988887654
No 144
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=20.30 E-value=1.3e+02 Score=27.77 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=30.4
Q ss_pred cCCcceeecCCCCHHHHHHHHHhCCCCCCCceeeecccc
Q 023464 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (282)
Q Consensus 42 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v 80 (282)
++.+..+.|+=|+=..|.++-+.. +.+.+||.||..
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 456999999999999998888865 578899999976
No 145
>PF04839 PSRP-3_Ycf65: Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65); InterPro: IPR006924 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This small acidic protein is found in 30S ribosomal subunit of cyanobacteria and plant plastids. In plants it has been named plastid-specific ribosomal protein 3 (PSRP-3), and in cyanobacteria it is named Ycf65. Plastid-specific ribosomal proteins may mediate the effects of nuclear factors on plastid translation. The acidic PSRPs are thought to contribute to protein-protein interactions in the 30S subunit, and are not thought to bind RNA [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome, 0009536 plastid; PDB: 2KT9_A.
Probab=20.25 E-value=2.7e+02 Score=18.38 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 023464 4 DQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (282)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~a~~il~ 33 (282)
+++...+-....+++.+-..|+-++++++.
T Consensus 14 e~lk~eLe~K~WIs~~e~i~lLN~~TeiIN 43 (49)
T PF04839_consen 14 EQLKNELESKPWISEKERIELLNQATEIIN 43 (49)
T ss_dssp HHHHHHHHHSTTS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345556667889999999999999999875
Done!