Citrus Sinensis ID: 023465

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Secondary Structure (PSIPRED)
ccccccccEEEEEcccccccccccccccccccccEEEEEEcccccccccEEEEEccccccccHHHHcHHHHHHHHHcccccHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccEEEEEccccccccccEEEcccccccccccEEEEEEEEcccccHHHHHcccccccccccccccccEEEEEEEEcccccccccccEEEEcccccEEcEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEEEccccccccEEHccHHHHHHHHHHHHHHHcccEEEEEEcccHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEEccccEEEccccHHHEEEEEEccccccccEEEEEcccccccccccEEEEEEEEEEccccccEcccccccccccccEEcEEEEEEEEEEcccccccccccEEEEEcccccEEEEEEcHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mqaakkpgviinmgssaglypmyndpiysaskggVVLFTrsltpykrkgirinvlcpefvqtemGLKVASKFIDLMGGFVPMEMVVKGAFELItdeskagsclwitnrrgmeywptseEKAKYLVRSsgsmkrsssqvplnlnvqlpESFEKLLWIYGQvnfssgryfsdgndigsrlpfdagFEAVGLIAAVgdsvnnvkvgtpaaimtfgsyaeftmvpskhilpvarpdpEVVAMLTSGLTASIAleqagpasgkKVLVTAAAGGTGQFAVQVYFQIQG
Flexible Loop (DISEMBL)
MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSltpykrkgiriNVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELItdeskagsclwitnrrgmeywptsEEKAKYLVRSSGsmkrsssqvplNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Low Complexity Region (SEG)
MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRssgsmkrsssQVPLNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Disordered region (IsUnstruct)
********VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT************************NLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI**
Disordered Region (DISOPRED)
******P****NMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAK**************QVPLNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQ*
Disordered Region (DISEMBL)
MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYL***************LNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Disordered Region (DISPRO)
*****KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
P42865	340	Probable quinone oxidored	N/A	no	0.546	0.452	0.381	5e-21
Q24K16	377	Zinc-binding alcohol dehy	yes	no	0.400	0.299	0.508	6e-21
Q8BGC4	377	Zinc-binding alcohol dehy	yes	no	0.400	0.299	0.491	2e-20
Q8N4Q0	377	Zinc-binding alcohol dehy	yes	no	0.400	0.299	0.483	2e-19
P70684	265	15-hydroxyprostaglandin d	no	no	0.397	0.422	0.348	4e-12
Q3T0C2	266	15-hydroxyprostaglandin d	no	no	0.397	0.421	0.333	4e-11
Q8VCC1	269	15-hydroxyprostaglandin d	no	no	0.382	0.401	0.330	2e-10
P15428	266	15-hydroxyprostaglandin d	no	no	0.429	0.454	0.321	2e-10
Q8MJY8	266	15-hydroxyprostaglandin d	N/A	no	0.397	0.421	0.325	3e-10
O74489	329	Probable quinone oxidored	yes	no	0.351	0.300	0.423	2e-09

>sp|P42865|QOR_LEIAM Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1

 Score =  101 bits (252), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 11/165 (6%)

Query: 124 LVRSSGSMKRSSSQVPLNLNVQLPESFEKLLWIYGQVN-----FSSGRYFSDGNDIGSRL 178
           +V  S   + S+S V  +L  ++PE   ++   Y  VN     F++G YF +      + 
Sbjct: 12  VVSLSKDFRSSTSVVEAHLPEEVPEGMVRVSVKYAGVNASDLNFTNGSYFKN-----VQP 66

Query: 179 PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAM 238
           PFD GFEA G +  +G  V NVKVG    +M +G +AEF   P++  +PV    PE   +
Sbjct: 67  PFDCGFEAAGTVVQIGAGVANVKVGDHVVLMQYGCFAEFLDAPAERCIPVPELKPEYSVL 126

Query: 239 LTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQVYFQIQG 282
             S LTA++AL + G    G   LVTAAAGGTGQ AVQ+   + G
Sbjct: 127 PVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYG 171

Leishmania amazonensis (taxid: 5659)
EC: 1EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1

 Score =  101 bits (252), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 80/120 (66%), Gaps = 7/120 (5%)

Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFDAGFE VG + A+G S +    VG   A M  GS+AE+
Sbjct: 78  DINYSAGRY-----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEY 132

Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP++  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct: 133 TVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQL 192

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8BGC4|ZADH2_MOUSE Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 7/120 (5%)

Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+
Sbjct: 78  DINYSAGRY-----DPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY 132

Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP+   +P+    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct: 133 TVVPASIAIPMPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQL 192

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8N4Q0|ZADH2_HUMAN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 7/120 (5%)

Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+
Sbjct: 78  DINYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY 132

Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+Q+
Sbjct: 133 TVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 192

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P70684|PGDH_CAVPO 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 17/129 (13%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR---KGIRINVLCPE 58
           Q   + GVIINM S AGL P+   P+Y ASK G++ FTRS    ++    G+R+N +CP 
Sbjct: 125 QHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPG 184

Query: 59  FVQT----------EMG--LKVASKFIDLMG--GFVPMEMVVKGAFELITDESKAGSCLW 104
           FV T           MG  ++      D+M   G +  EM+  G   LI D+   G+ + 
Sbjct: 185 FVNTSILQSIEKEENMGPYIEYTGHIKDMMKCYGILDPEMIANGLITLIEDDDLNGAIMK 244

Query: 105 ITNRRGMEY 113
           IT   G+ +
Sbjct: 245 ITTSNGIHF 253

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q3T0C2|PGDH_BOVIN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Bos taurus GN=HPGD PE=2 SV=1

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 17/129 (13%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS---LTPYKRKGIRINVLCPE 58
           Q   + G+ INM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP 
Sbjct: 125 QNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPG 184

Query: 59  FVQTEMGLKVAS-----KFIDLMG---------GFVPMEMVVKGAFELITDESKAGSCLW 104
           FV T +   +       K+I+ MG         G +   M+  G   LI D++  G+ + 
Sbjct: 185 FVDTPILKSIEKEENMGKYIEYMGPIKDMMKYYGILDPSMIANGLITLIEDDALNGAIMK 244

Query: 105 ITNRRGMEY 113
           IT  +G+ +
Sbjct: 245 ITTSKGIHF 253

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q8VCC1|PGDH_MOUSE 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=2 SV=1

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 25/133 (18%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS---LTPYKRKGIRINVLCPE 58
           Q   + G+IINM S AGL P+   P+Y ASK G++ FTRS        + G+R+NV+CP 
Sbjct: 125 QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPG 184

Query: 59  FVQT----------EMG--------LKVASKFIDLMGGFVPMEMVVKGAFELITDESKAG 100
           FV T           MG        +K   KF     G +    +  G   LI D++  G
Sbjct: 185 FVDTPILESIEKEENMGQYIEYKDQIKAMMKFY----GVLHPSTIANGLINLIEDDALNG 240

Query: 101 SCLWITNRRGMEY 113
           + + IT  +G+ +
Sbjct: 241 AIMKITASKGIHF 253

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|P15428|PGDH_HUMAN 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 19/140 (13%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS---LTPYKRKGIRINVLCPE 58
           Q   + G+IINM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP 
Sbjct: 125 QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 184

Query: 59  FVQT----------EMG--LKVASKFIDLMG--GFVPMEMVVKGAFELITDESKAGSCLW 104
           FV T           MG  ++      D++   G +   ++  G   LI D++  G+ + 
Sbjct: 185 FVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 244

Query: 105 ITNRRGMEY--WPTSEEKAK 122
           IT  +G+ +  + T+  +AK
Sbjct: 245 ITTSKGIHFQDYDTTPFQAK 264

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4. Inhibits in vivo proliferation of colon cancer cells.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q8MJY8|PGDH_MACFA 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1

 Score = 66.2 bits (160), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 17/129 (13%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS---LTPYKRKGIRINVLCPE 58
           Q   + G+IINM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP 
Sbjct: 125 QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 184

Query: 59  FVQT----------EMG--LKVASKFIDLMG--GFVPMEMVVKGAFELITDESKAGSCLW 104
           FV T           MG  ++      D++   G +   ++  G   LI D++  G+ + 
Sbjct: 185 FVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 244

Query: 105 ITNRRGMEY 113
           IT  +G+ +
Sbjct: 245 ITTSKGIHF 253

Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|O74489|QOR_SCHPO Probable quinone oxidoreductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zta1 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 5/104 (4%)

Query: 178 LPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARPDPEV 235
           LP+  G EA G++AAVGD V  + KVG     +T FG+YA++T VP+  +  V+   P  
Sbjct: 57  LPYIPGKEAAGVVAAVGDKVEADFKVGDRVVYLTPFGAYAQYTNVPTTLVSKVSEKIPLK 116

Query: 236 V--AMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQV 276
           +  A L  GLTA   +E+A P  +G  V+V AAAGG G    Q+
Sbjct: 117 IASAALLQGLTAYTLIEEAYPVKTGDTVVVHAAAGGVGLLLCQM 160

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
224105531	634	predicted protein [Populus trichocarpa]	0.971	0.432	0.684	1e-114
225428782	634	PREDICTED: zinc-binding alcohol dehydrog	0.964	0.429	0.689	1e-113
255555487	634	alcohol dehydrogenase, putative [Ricinus	0.971	0.432	0.681	1e-110
357475423	633	15-hydroxyprostaglandin dehydrogenase [M	0.968	0.431	0.630	1e-105
357475429	633	15-hydroxyprostaglandin dehydrogenase [M	0.968	0.431	0.646	1e-105
356500045	633	PREDICTED: zinc-binding alcohol dehydrog	0.968	0.431	0.646	1e-103
171854667	633	putative NADPH oxidoreductase [Capsicum	0.968	0.431	0.614	1e-100
449445868	635	PREDICTED: zinc-binding alcohol dehydrog	0.971	0.431	0.625	1e-100
357158783	634	PREDICTED: zinc-binding alcohol dehydrog	0.971	0.432	0.595	2e-99
242044942	634	hypothetical protein SORBIDRAFT_02g02672	0.964	0.429	0.607	1e-98

>gi|224105531|ref|XP_002313845.1| predicted protein [Populus trichocarpa] gi|222850253|gb|EEE87800.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/314 (68%), Positives = 245/314 (78%), Gaps = 40/314 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M AA+KPGVIIN+GS++GLYPMYNDPIYS SKGGVV+FTRSL PYKR+GIRINVLCPEFV
Sbjct: 141 MLAAQKPGVIINLGSASGLYPMYNDPIYSGSKGGVVMFTRSLVPYKRRGIRINVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           +TEMG K+ SKFID+MGGFVPM+MVVKGAFELI+DESKAGSCLWITNRRGMEYWPT  E+
Sbjct: 201 KTEMGEKIDSKFIDMMGGFVPMKMVVKGAFELISDESKAGSCLWITNRRGMEYWPTPMEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLLW------------------------- 155
           AKYL RSS S +R S Q P+NL  QLP S+EKL+                          
Sbjct: 261 AKYLARSSNSKRRVSYQAPVNL--QLPLSYEKLVVQTLSHNFRNATRIVRVPLRLPIGSH 318

Query: 156 ------IYG-----QVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 IY       VNFSSGRYFS  N D+ S LPFD GFEAVG+IAAVG+SV ++KVG
Sbjct: 319 QVLVKVIYAGVNASDVNFSSGRYFSGKNQDLTSSLPFDVGFEAVGIIAAVGESVTDLKVG 378

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
           TPAA+MTFGSY EFT+VP+KHILPV RPDPEVVA+LTSG+TASIALE+ G   SG+ V+V
Sbjct: 379 TPAALMTFGSYTEFTVVPAKHILPVPRPDPEVVALLTSGMTASIALEKCGQMKSGEAVVV 438

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 439 TAAAGGTGQFAVQL 452

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428782|ref|XP_002285205.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2 [Vitis vinifera] gi|297741296|emb|CBI32427.3| unnamed protein product [Vitis vinifera]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/316 (68%), Positives = 243/316 (76%), Gaps = 44/316 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           MQAAKKPGVIINMGS++GLYPMY DPIYSASKGGVVLFTRSL PYKR GIR+NVLCPEFV
Sbjct: 141 MQAAKKPGVIINMGSASGLYPMYVDPIYSASKGGVVLFTRSLAPYKRHGIRVNVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           QTEMG  V SKFI LMGG+V MEMVVKGAFELI+DE KAGSCLWITNRRGMEYWPT  E+
Sbjct: 201 QTEMGSSVDSKFIGLMGGYVSMEMVVKGAFELISDERKAGSCLWITNRRGMEYWPTPIEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPL--NLNVQLPESFEKLL------------------------ 154
           AKY +     + +S  +VP   +LN+Q+P+SFEK++                        
Sbjct: 261 AKYRL----PISKSRRKVPFKASLNLQIPQSFEKVVVHTLSHNFRSATSIVRVPLRLPIK 316

Query: 155 -------WIYG-----QVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 201
                   IY       VNFSSGRYF  +  D+GSRLPFDAGFEAVG+IAAVGDSVN++K
Sbjct: 317 PRHVLVKIIYAGVNASDVNFSSGRYFGGNDKDLGSRLPFDAGFEAVGIIAAVGDSVNDLK 376

Query: 202 VGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQA-GPASGKKV 260
           +GTPAA+M FGSYAEF MVPSKHILPVARPDPEVVAMLTSGLTASIALE+A    SGK V
Sbjct: 377 IGTPAAVMIFGSYAEFMMVPSKHILPVARPDPEVVAMLTSGLTASIALEKAVQMESGKVV 436

Query: 261 LVTAAAGGTGQFAVQV 276
           LVTAAAGGTGQFAVQ+
Sbjct: 437 LVTAAAGGTGQFAVQL 452

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555487|ref|XP_002518780.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223542161|gb|EEF43705.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/314 (68%), Positives = 250/314 (79%), Gaps = 40/314 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M+AA+KPGVIIN+GS++GLYPM+NDPIY+ASKGGV++FTRSL PYKR+GIRINVLCPEFV
Sbjct: 141 MKAAQKPGVIINLGSASGLYPMFNDPIYAASKGGVIMFTRSLVPYKRQGIRINVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           +TEMG KV++KFID+MGGFVPM+MV+KGAFELI++E+ AGSCLWITNRRGME+WPT  E+
Sbjct: 201 ETEMGSKVSAKFIDMMGGFVPMQMVIKGAFELISNENSAGSCLWITNRRGMEFWPTPAEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLLW------------------------- 155
           AKYL+ SSGS KR SS VP+NL  QLP S+EK++                          
Sbjct: 261 AKYLLSSSGSSKRVSSAVPVNL--QLPNSYEKIVVHTLSHNFRSATSIVRAPLRLPIGPN 318

Query: 156 ------IYG-----QVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 +Y       VNFSSGRYFS  N DI SRLPFDAGFE VG+IAA+G+SV ++KVG
Sbjct: 319 QVLLKVVYAGVNASDVNFSSGRYFSGNNKDIASRLPFDAGFELVGIIAALGESVRDLKVG 378

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
           TPAAIMTFGSYAEFT+VP+KHILPV R DPEVVAMLTSGLTASIALE+A    SGK VLV
Sbjct: 379 TPAAIMTFGSYAEFTVVPAKHILPVPRLDPEVVAMLTSGLTASIALEKAAQMESGKLVLV 438

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 439 TAAAGGTGQFAVQL 452

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475423|ref|XP_003607997.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|355509052|gb|AES90194.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/314 (63%), Positives = 232/314 (73%), Gaps = 41/314 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M+A K+PG IIN+GS++GLYPMY DP+Y+ SKGGVV+FTR+L  YKR+GIRINVLCPEF+
Sbjct: 141 MEALKRPGTIINLGSASGLYPMYGDPVYTGSKGGVVMFTRALRLYKRQGIRINVLCPEFI 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           +TEMGLKV  + I +MGGFVPM+MVVKGAFELITDESKAG CLWITNRRG+EYWPT  E+
Sbjct: 201 ETEMGLKVDPRLISMMGGFVPMDMVVKGAFELITDESKAGHCLWITNRRGLEYWPTPSEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLL-------------------------- 154
           AKYL R +   ++S  Q P   +++LP+SFEK +                          
Sbjct: 261 AKYLTRPTRFRRKSEYQAP---SIKLPDSFEKTVVHTLTHNFRNATSIVRAPLRLPIKPN 317

Query: 155 -----WIYG-----QVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 IY       VNFSSGRYF   N +  +RLPFDAGFEAVG+IAAVGDSV ++KVG
Sbjct: 318 HVLVKIIYAGVNASDVNFSSGRYFGGNNKETAARLPFDAGFEAVGIIAAVGDSVTDLKVG 377

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
            P A MTFG YAEFTM+PSK+ LPV RPDPE VAMLTSGLTASIALE+AG   SGK VLV
Sbjct: 378 MPCAFMTFGGYAEFTMIPSKYALPVPRPDPEAVAMLTSGLTASIALEKAGQMESGKVVLV 437

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 438 TAAAGGTGQFAVQL 451

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475429|ref|XP_003608000.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|355509055|gb|AES90197.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/314 (64%), Positives = 234/314 (74%), Gaps = 41/314 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M+A K+PG IINMGS++GLYPMY DPIYS SKGGVV+FTRSL  YKRKGIR+NVLCPEFV
Sbjct: 141 MEALKRPGAIINMGSASGLYPMYLDPIYSGSKGGVVMFTRSLRLYKRKGIRVNVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           +TE+GLKV  KF+ +MGGF+PMEMVVKGAFELITDESKAG CLWI+NRRG+EYWPT  E+
Sbjct: 201 ETELGLKVDPKFLSMMGGFIPMEMVVKGAFELITDESKAGHCLWISNRRGLEYWPTPSEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLL-------------------------- 154
           AKYLVR     +R+  + P   +++LPESFEK++                          
Sbjct: 261 AKYLVRPRRLRRRAEYKAP---SIKLPESFEKIVVQTLTHNFRNATSIVRAPLRLPVKPN 317

Query: 155 -----WIYG-----QVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 IY       VNFSSGRYF   N +  +RLPFDAGFEAVG+IAAVGDSV ++KVG
Sbjct: 318 LVLVKIIYAGVNASDVNFSSGRYFGGNNKETTARLPFDAGFEAVGIIAAVGDSVTDLKVG 377

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
            P A MTFG YAEFTM+PSK+ LPV RPDPE VAMLTSGLTASIALE+AG   SGK VLV
Sbjct: 378 MPCAFMTFGGYAEFTMIPSKYALPVPRPDPEGVAMLTSGLTASIALEKAGQMESGKVVLV 437

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 438 TAAAGGTGQFAVQL 451

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500045|ref|XP_003518845.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Glycine max]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/314 (64%), Positives = 236/314 (75%), Gaps = 41/314 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M+A+K+PGVIIN+GS++GLYPM  DPIYS SKGGVV+F+RSL  YKR+GIR+NVLCPEFV
Sbjct: 141 MEASKRPGVIINLGSASGLYPMVADPIYSGSKGGVVMFSRSLRLYKRQGIRVNVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           +TEMG K+  K I+L GGFVPMEMVVKGAFELI DESKAG CLWITNR+GMEYWP+  E+
Sbjct: 201 ETEMGNKIDPKIINLSGGFVPMEMVVKGAFELIMDESKAGHCLWITNRQGMEYWPSPSEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLL-------------------------- 154
           AKYL+RSS   +RS  + PL   +++PESFEK++                          
Sbjct: 261 AKYLIRSSRFRRRSDFKAPL---IKIPESFEKIVVHTLTHNFRNATSIVRTPLRLPVKPK 317

Query: 155 -----WIYG-----QVNFSSGRYF-SDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 I+       VNFSSGRYF  + ND+ SRLPFDAGFEAVG+IAAVGDSV ++KVG
Sbjct: 318 HVLVKIIFAGVNASDVNFSSGRYFGGNNNDVVSRLPFDAGFEAVGIIAAVGDSVTDLKVG 377

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
            P A MTFG YAEF M+PSKH LPV RPDPEVVAMLTSGLTASIALE+AG   SGK VLV
Sbjct: 378 MPCAFMTFGGYAEFLMIPSKHALPVPRPDPEVVAMLTSGLTASIALEKAGQMESGKVVLV 437

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 438 TAAAGGTGQFAVQL 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171854667|dbj|BAG16523.1| putative NADPH oxidoreductase [Capsicum chinense]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/314 (61%), Positives = 236/314 (75%), Gaps = 41/314 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           MQ A+KPGVIIN+GS++GLYPMY  PIYSASKGGVV+FTRSL P+KR+GIRINVLCPEFV
Sbjct: 141 MQTAQKPGVIINLGSASGLYPMYAGPIYSASKGGVVMFTRSLAPFKRQGIRINVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           QT++  +V   FID +GG++PME++++GAF+LI DESKAG+CLW+T+RRG+EYWPT  E+
Sbjct: 201 QTDLAGQVNPSFIDQLGGYLPMELLLEGAFQLIRDESKAGACLWVTSRRGLEYWPTPAEE 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEK---------------------------- 152
           AKY + SS S ++S   VP++L  ++P SFEK                            
Sbjct: 261 AKYRLPSSKS-RKSLVTVPMDL--KIPHSFEKVVVNTLSHNFRSATRIVRTELRLPLKPD 317

Query: 153 ---LLWIYG-----QVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
              L  IY       VNFSSGRYFS +G D+ S LP D+GFEAVG+IAA+GD+V N+K+G
Sbjct: 318 YVLLKVIYAGVNASDVNFSSGRYFSGNGKDVNSLLPLDSGFEAVGIIAAIGDAVRNLKIG 377

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
            PAAIMTFG YAEFTMVP+KHILPVA+P PEV+AMLTSGLTASIALE+A    SGK VLV
Sbjct: 378 MPAAIMTFGGYAEFTMVPAKHILPVAKPAPEVLAMLTSGLTASIALEKAAQMESGKVVLV 437

Query: 263 TAAAGGTGQFAVQV 276
           TAAAG TGQFAVQ+
Sbjct: 438 TAAAGATGQFAVQL 451

Source: Capsicum chinense

Species: Capsicum chinense

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445868|ref|XP_004140694.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Cucumis sativus]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/315 (62%), Positives = 231/315 (73%), Gaps = 41/315 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M++ K+PGVIIN+GS++GLYP+  DP Y+ASKGGVV+FTRSL+PYKRKGIRINVLCPEFV
Sbjct: 141 MESLKRPGVIINLGSASGLYPLSIDPAYTASKGGVVMFTRSLSPYKRKGIRINVLCPEFV 200

Query: 61  QTEMGLKVA-SKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEE 119
           +TE+   V   +F + +GGFVPMEMV+KG FELI DESKAGSCLWITNRRGMEYWP+S E
Sbjct: 201 KTELASTVVGERFAERLGGFVPMEMVIKGTFELINDESKAGSCLWITNRRGMEYWPSSTE 260

Query: 120 KAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLL------------------------- 154
           +AKYL+ SS   K+SS+       V +P+SFEK++                         
Sbjct: 261 EAKYLLPSSRLGKQSST--AFFQKVDIPQSFEKVIVHTLSHNFRGATSIVHSPLRLPIRP 318

Query: 155 ------WIYG-----QVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 202
                  +Y       VNFSSG YF     D+ S LP DAGFE+VG+IAAVGDSV ++KV
Sbjct: 319 DHVLVKIVYAGVNASDVNFSSGHYFGGSSKDLQSMLPLDAGFESVGIIAAVGDSVTHLKV 378

Query: 203 GTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVL 261
           GTPAA+MTFGSYAEF  V SKHILPVARPDPEVVAMLTSGLTASIALE+A    SGK VL
Sbjct: 379 GTPAAMMTFGSYAEFVTVHSKHILPVARPDPEVVAMLTSGLTASIALEKAAQMESGKVVL 438

Query: 262 VTAAAGGTGQFAVQV 276
           VTAAAGGTGQFAVQ+
Sbjct: 439 VTAAAGGTGQFAVQL 453

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357158783|ref|XP_003578239.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Brachypodium distachyon]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 187/314 (59%), Positives = 231/314 (73%), Gaps = 40/314 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M++ KKPGVIIN+GS+AGLYPMY DPIYS +KGGVV+FTRSL P KR G+R+NVLCPEFV
Sbjct: 141 MRSLKKPGVIINIGSAAGLYPMYADPIYSGTKGGVVMFTRSLAPLKRHGVRVNVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           QT M  ++  K +D  GGF+ ME ++ GAFELI DESKAG+CLWIT RRGMEYWPTSEE+
Sbjct: 201 QTNMAEQINRKIVDATGGFMKMEEIINGAFELIKDESKAGACLWITKRRGMEYWPTSEEQ 260

Query: 121 AKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLL-------------------------- 154
            KYL+  + S KR+ ++      +Q+PE FEK++                          
Sbjct: 261 RKYLLNYTKS-KRTITKNAFP-GIQIPEFFEKIVVHTLSHNFRNATRLDRVRLRLPIEPQ 318

Query: 155 -----WIYG-----QVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 203
                 IY       VN+SSGRYFS    +  +RLPFDAGFEAVG++A+VGD+V+++KVG
Sbjct: 319 NVLVKIIYAGVNASDVNYSSGRYFSGSAKETAARLPFDAGFEAVGIVASVGDAVSHIKVG 378

Query: 204 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLV 262
           +P A+MTFGSYAEFT+VP+KH+LPV RPDPEVVAMLTSGLTASI+LE+AG   SG+ VLV
Sbjct: 379 SPVALMTFGSYAEFTLVPAKHLLPVPRPDPEVVAMLTSGLTASISLEKAGQMTSGQVVLV 438

Query: 263 TAAAGGTGQFAVQV 276
           TAAAGGTGQFAVQ+
Sbjct: 439 TAAAGGTGQFAVQL 452

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242044942|ref|XP_002460342.1| hypothetical protein SORBIDRAFT_02g026720 [Sorghum bicolor] gi|241923719|gb|EER96863.1| hypothetical protein SORBIDRAFT_02g026720 [Sorghum bicolor]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/316 (60%), Positives = 231/316 (73%), Gaps = 44/316 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M+  KKPGVIIN+GS+AGLYPM+ DPIYSA+KGGVV+FTRSL P KR G+R+NVLCPEFV
Sbjct: 141 MRDQKKPGVIINIGSAAGLYPMFYDPIYSATKGGVVMFTRSLAPLKRHGVRVNVLCPEFV 200

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK 120
           QT M  +++ K ID  GG++ ME VV GAFELI DESKAG+CLWIT RRGMEYWPT EE+
Sbjct: 201 QTNMAEQMSRKIIDSTGGYLKMEDVVNGAFELIQDESKAGACLWITKRRGMEYWPTPEEQ 260

Query: 121 AKYLVRSSGSMKRSSSQV-PLNLNVQLPESFEKLL------------------------- 154
            KY+V  + S +  ++ + P   ++++PE FEK++                         
Sbjct: 261 RKYMVNPNKSKRMLTNNIYP---SIRMPEFFEKIVVHTLSHNFRNATRLERVQLRFPIKA 317

Query: 155 ------WIYG-----QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVK 201
                  IY       VNFSSGRYFS GN  +I SRLPFDAGFE VG++AAVGDS +++K
Sbjct: 318 HSALVKIIYAGVNASDVNFSSGRYFS-GNPKEIASRLPFDAGFEGVGIVAAVGDSASHIK 376

Query: 202 VGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKV 260
           VGTP A+MTFGSYAEFT VP+KH+LPV RPDPEVVAMLTSGLTASI LE+AG   SG+ V
Sbjct: 377 VGTPVALMTFGSYAEFTEVPAKHLLPVPRPDPEVVAMLTSGLTASIGLEKAGQMTSGQVV 436

Query: 261 LVTAAAGGTGQFAVQV 276
           LVTAAAGGTGQFAVQ+
Sbjct: 437 LVTAAAGGTGQFAVQL 452

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
UNIPROTKB|Q24K16	377	ZADH2 "Zinc-binding alcohol de	0.397	0.297	0.512	2.7e-25
UNIPROTKB|E2R136	377	ZADH2 "Uncharacterized protein	0.397	0.297	0.504	2.4e-24
UNIPROTKB|Q8N4Q0	377	ZADH2 "Zinc-binding alcohol de	0.397	0.297	0.487	4.2e-24
UNIPROTKB|F1N5J9	308	ZADH2 "Zinc-binding alcohol de	0.397	0.363	0.512	6.1e-23
MGI|MGI:2444835	377	Zadh2 "zinc binding alcohol de	0.397	0.297	0.495	1.6e-22
RGD|1309999	377	Zadh2 "zinc binding alcohol de	0.397	0.297	0.487	4.3e-22
UNIPROTKB|F1NSU6	313	LOC100859402 "Uncharacterized	0.397	0.357	0.470	1.1e-21
UNIPROTKB|J3KTQ8	155	ZADH2 "Zinc-binding alcohol de	0.241	0.438	0.565	1e-13
UNIPROTKB|J3QQQ7	101	ZADH2 "Zinc-binding alcohol de	0.241	0.673	0.565	1e-13
UNIPROTKB|B4DZ91	254	ZADH2 "cDNA FLJ52809, highly s	0.241	0.267	0.565	1.1e-12

UNIPROTKB|Q24K16 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 265 (98.3 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
 Identities = 61/119 (51%), Positives = 80/119 (67%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFDAGFE VG + A+G S +    VG   A M  GS+AE+T
Sbjct:    79 INYSAGRY-----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYT 133

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP++  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:   134 VVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQL 192

GO:0005777 "peroxisome" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2R136 ZADH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 255 (94.8 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
 Identities = 60/119 (50%), Positives = 75/119 (63%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFD GFE VG + A+G S +    VG   A M  GS+AE+T
Sbjct:    79 INYSAGRY-----DPSVKTPFDVGFEGVGEVVALGLSASARYTVGQAVAYMAPGSFAEYT 133

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP+    PV    PE V +  SG TA I+L + G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:   134 VVPASAAAPVPSVKPEYVTLPVSGTTAYISLNELGGLSEGKKVLVTAAAGGTGQFAVQL 192

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8N4Q0 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 252 (93.8 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
 Identities = 58/119 (48%), Positives = 77/119 (64%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T
Sbjct:    79 INYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYT 133

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+Q+
Sbjct:   134 VVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1N5J9 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 61/119 (51%), Positives = 80/119 (67%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFDAGFE VG + A+G S +    VG   A M  GS+AE+T
Sbjct:    10 INYSAGRY-----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYT 64

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP++  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:    65 VVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQL 123

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:2444835 Zadh2 "zinc binding alcohol dehydrogenase, domain containing 2" [Mus musculus (taxid:10090)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 59/119 (49%), Positives = 78/119 (65%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T
Sbjct:    79 INYSAGRY-----DPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYT 133

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP+   +P+    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:   134 VVPASIAIPMPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQL 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1309999 Zadh2 "zinc binding alcohol dehydrogenase, domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 58/119 (48%), Positives = 79/119 (66%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A +T GS+AE+T
Sbjct:    79 INYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASAKYTVGQAVAYVTPGSFAEYT 133

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP+   +P+    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:   134 VVPASIAIPMPSVKPEYLTLLVSGTTAYISLKELGELSEGKKVLVTAAAGGTGQFAVQL 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NSU6 LOC100859402 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 56/119 (47%), Positives = 78/119 (65%)

Query:   160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFT 218
             +N+S+GRY     D   + P D GFE +G + A+G S + +  VG   A +  GS+AE+T
Sbjct:    15 INYSAGRY-----DTSVKPPLDVGFEGIGDVVALGLSASAHYSVGQAVAYVKAGSFAEYT 69

Query:   219 MVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
             +VP+K  +P+    PE + ++ SG TA I+L+  G  S GKKVLVTAAAGGTGQFAVQ+
Sbjct:    70 VVPAKEAVPLPSVKPEFLTLMVSGATAYISLKNLGGLSEGKKVLVTAAAGGTGQFAVQL 128

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|J3KTQ8 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)

Query:   209 MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAG 267
             M  GS+AE+T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAG
Sbjct:     1 MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 60

Query:   268 GTGQFAVQV 276
             GTGQFA+Q+
Sbjct:    61 GTGQFAMQL 69

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|J3QQQ7 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)

Query:   209 MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAG 267
             M  GS+AE+T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAG
Sbjct:     1 MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 60

Query:   268 GTGQFAVQV 276
             GTGQFA+Q+
Sbjct:    61 GTGQFAMQL 69

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|B4DZ91 ZADH2 "cDNA FLJ52809, highly similar to Zinc-binding alcohol dehydrogenasedomain-containing protein 2 (EC 1.-.-.-)" [Homo sapiens (taxid:9606)]

 Score = 178 (67.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 39/69 (56%), Positives = 50/69 (72%)

Query:   209 MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAG 267
             M  GS+AE+T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAG
Sbjct:     1 MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 60

Query:   268 GTGQFAVQV 276
             GTGQFA+Q+
Sbjct:    61 GTGQFAMQL 69

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.IX.2139.1 hypothetical protein (634 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	9e-50
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-31
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-19
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-18
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-17
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-17
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-15
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	6e-15
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-14
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	6e-14
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-13
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	8e-13
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-12
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-12
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-12
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-12
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	5e-12
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-11
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-11
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-11
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	5e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-11
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-10
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-10
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	3e-10
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-10
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-10
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	6e-10
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	8e-10
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-09
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-09
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-09
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-09
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	3e-09
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	4e-09
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-09
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-08
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	3e-08
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	4e-08
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-08
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-08
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-08
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	9e-08
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-07
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-07
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-07
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-07
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-07
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-07
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-07
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-07
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	5e-07
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	5e-07
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-06
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-06
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-06
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-06
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-06
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-06
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-06
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	5e-06
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-06
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-06
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	5e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	5e-06
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	6e-06
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-06
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	7e-06
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	8e-06
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-06
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-06
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	9e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-05
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-05
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-05
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-05
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-05
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-05
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-05
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-05
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-05
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-05
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-05
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-05
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-05
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-05
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-05
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	4e-05
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-05
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	4e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	5e-05
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-05
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	5e-05
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	6e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-05
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	7e-05
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	7e-05
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	9e-05
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-04
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-04
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-04
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-04
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-04
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-04
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-04
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	2e-04
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-04
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-04
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-04
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-04
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-04
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-04
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	6e-04
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	6e-04
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-04
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	9e-04
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	0.001
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	0.001
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	0.001
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.001
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	0.001
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	0.001
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	0.001
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	0.002
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	0.002
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	0.002
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	0.002
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	0.002
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	0.002
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	0.002
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	0.002
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	0.002
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	0.002
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	0.003
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	0.003
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	0.003
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	0.003
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	0.003
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	0.004
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	0.004
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	0.004

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  166 bits (423), Expect = 9e-50
 Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 6/117 (5%)

Query: 160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTM 219
           +NF++GRY       G + PFD GFE VG + AVG+ V + KVG   A M+FG++AE+ +
Sbjct: 47  INFTAGRYD-----PGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQV 101

Query: 220 VPSKHILPVARPDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQ 275
           VP++H +PV    PEV+ +L SGLTASIALE+ G   SG+ VLVTAAAGGTGQFAVQ
Sbjct: 102 VPARHAVPVPELKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ 158

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  115 bits (290), Expect = 5e-31
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP--YKRKGIRINVLCPEFVQT 62
            K GVI+N+GS AGLYP    P+YSASK GVV FTRSL      + G+R+N +CP F  T
Sbjct: 131 GKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTNT 190

Query: 63  EMGLKVASKFIDLMG--GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW 114
            +   + +K  +++        E+V K    LI D+ K G+   +   + +E  
Sbjct: 191 PLLPDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDDEKNGAIWIVDGGKLIEIE 244

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 86.3 bits (215), Expect = 1e-19
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVAR--PDPE 234
           LPF  G E  G++ AVG  V   KVG   A     G+YAE+ +VP+  ++ +     D  
Sbjct: 54  LPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDET 113

Query: 235 VVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQ 275
             A+L  GLTA   L +  P   G  VLV AAAGG G    Q
Sbjct: 114 AAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQ 155

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 82.4 bits (204), Expect = 4e-18
 Identities = 44/123 (35%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSYA 215
           VN                LPF  G EA G++ AVG  V   KVG   A +      G YA
Sbjct: 39  VNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYA 98

Query: 216 EFTMVPSK--HILPVARPDPEVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQF 272
           E+ +VP+     LP      E  A+  +GLTA +AL        G+ VLV  AAGG G  
Sbjct: 99  EYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSA 158

Query: 273 AVQ 275
           A+Q
Sbjct: 159 AIQ 161

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF----GSYAEFTMVPSKHILPV 228
                LP   G +  G++ AVG  V   KVG     MT     G+YAE+ +VP+  +   
Sbjct: 54  AFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADEL--A 111

Query: 229 ARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQ 275
            +P      E  A+  +GLTA  AL E  G  +G+ VL+  AAGG G FAVQ
Sbjct: 112 LKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQ 163

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 80.2 bits (199), Expect = 2e-17
 Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPDP--- 233
           LPF  G E  G++ AVG+ V   KVG    A+   G +AE  +VP+  + P+  PD    
Sbjct: 57  LPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL--PDGLSF 114

Query: 234 -EVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQV 276
            E  A+  +  TA  AL + A    G+ VLV  AAGG G  AVQ+
Sbjct: 115 EEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL 159

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTP----AAIMTFGSYAEFTMVPSKHILPVARPD 232
             P   G +  G + AVG  V   KVG            G+ AE+ + P   +    +P+
Sbjct: 57  PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGL--AKKPE 114

Query: 233 ----PEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQV 276
                E  A+  +GLTA  AL  AG    G++VL+  A+GG G FAVQ+
Sbjct: 115 GVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQI 163

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.4 bits (181), Expect = 6e-15
 Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARPD--- 232
           + PF  GFE  G + AVG+ V + KVG     +T FG YAE   VP+  + P+  PD   
Sbjct: 55  KPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL--PDGMS 112

Query: 233 -PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQ 275
             E  A   + LTA  AL E      G+ VLV +AAGG G  A Q
Sbjct: 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQ 157

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +  G I+N+ S AGL P+     Y+ASK  +   TRSL       GIR+N + P  V T
Sbjct: 122 KQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLVDT 181

Query: 63  EMGLKVASKFIDL-------MGGFVPMEMVVKGAFELITDESKA--GSCLWIT 106
            M  K+  +  +        +G     E V +    L +DE+    G  + + 
Sbjct: 182 PMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.3 bits (173), Expect = 6e-14
 Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 18/126 (14%)

Query: 162 FSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG-----TPAAIM-TFGSYA 215
           F  G Y          LP   G+EA G++ AVG  V    VG      PAA +  +G+YA
Sbjct: 46  FRRGAYIEPPP-----LPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYA 100

Query: 216 EFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTG 270
           E+ +VP+  ++    PD     E  A+    LTA  AL E AG   G  VL+TAA+   G
Sbjct: 101 EYALVPAAAVVK--LPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVG 158

Query: 271 QFAVQV 276
             A+Q+
Sbjct: 159 LAAIQI 164

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA----IMTFGSYAEFTMVPSKHILPVAR- 230
              P   G +  G++ AVG  V   KVG   A    +   GS+AE+T+V ++ +LP+   
Sbjct: 54  WSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDS 113

Query: 231 -PDPEVVAMLTSGLTASIALEQAGPASGKK-VLVTAAAGGTGQFAVQ 275
               E  A+  +GLTA  AL +       + +L+T  AGG G FAVQ
Sbjct: 114 LSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQ 160

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.3 bits (165), Expect = 8e-13
 Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 22/121 (18%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVG---------------TPAAIMTFGS-----YAE 216
             P   G + VG + AVG+ V+  ++G                PA I   GS     +AE
Sbjct: 76  SFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAE 135

Query: 217 FTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAV 274
           +T+VP+++  PV  P  D E+     S  TA   LE+AG  +G+ VLVT A+GG G   V
Sbjct: 136 YTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALV 195

Query: 275 Q 275
           Q
Sbjct: 196 Q 196

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.9 bits (164), Expect = 9e-13
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP-DP 233
             LPF  G++ VG + A+G  V   +VG   A +T  G  AE+  + +K+++PV    D 
Sbjct: 55  PPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDA 114

Query: 234 -EVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQ 275
            E V ++ + +TA   L +A    +G++VL+  A+GG GQ  ++
Sbjct: 115 AEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLE 158

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 66.3 bits (163), Expect = 1e-12
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 9/107 (8%)

Query: 177 RLPFDA--GFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD-- 232
             P +A  G E  G++  VG  V  + VG     +  G++A   +  ++ ++P+  PD  
Sbjct: 19  LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGAFATRVVTDARLVVPI--PDGW 76

Query: 233 --PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
              E   +    LTA  AL + A    G+ VL+ AAAGG GQ A+Q+
Sbjct: 77  SFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQL 123

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAM 238
           G E  G++  VG  V  +KVG     +  G++A    V ++ ++ +  PD     E   +
Sbjct: 32  GLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKI--PDSLSFEEAATL 89

Query: 239 LTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQV 276
             + LTA  AL        G+ VL+ AAAGG GQ A+Q+
Sbjct: 90  PVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQL 128

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 65.2 bits (160), Expect = 2e-12
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR----KGIRINVLCPEFV 60
           ++ G IIN+ S  GL        Y+ASK GV+ FT+SL    R    +GI +N + P F+
Sbjct: 132 QRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLA---RELASRGITVNAVAPGFI 188

Query: 61  QTEMGLKVASKFIDLMGGFVPME 83
           +T+M   +     + +   +P+ 
Sbjct: 189 ETDMTDALPEDVKEAILAQIPLG 211

Length = 248

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 11/130 (8%)

Query: 157 YGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP--AAIMTF--G 212
           YG+   +  R        G   P   G +  G++  +G  V + ++G     A+  +  G
Sbjct: 52  YGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQG 111

Query: 213 SYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALEQAGP-----ASGKKVLVTAA 265
           ++AE+ +VP   +   P      E  ++  +GLTA  AL   G      A+GK+VL+   
Sbjct: 112 THAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGG 171

Query: 266 AGGTGQFAVQ 275
           +GG G FA+Q
Sbjct: 172 SGGVGTFAIQ 181

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP------AAIMTFGSYAEFTMVPSKHI--LPVA 229
           LP+  G +  G++ AVG+ V+ +KVG              G+ AE+ +VP+  +  LP  
Sbjct: 57  LPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDG 116

Query: 230 RPDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQ 275
               +  A+    LTA  AL  +AG  +G+ VLV   +G  G  AVQ
Sbjct: 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQ 163

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 64.9 bits (159), Expect = 5e-12
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 33/138 (23%)

Query: 171 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP------------------------- 205
           G  +  +LPF  G E  G +  VG  V+ +K G P                         
Sbjct: 50  GGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCEN 109

Query: 206 ---AAIMTFGSYAEFTMVPSKHILPVAR-PDPEVVAMLT-SGLTASIALEQAGPA--SGK 258
                I T G +AE+ +VPS+ ++ + R  DP   A L  +GLTA  A+++A P    G 
Sbjct: 110 ARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGS 169

Query: 259 KVLVTAAAGGTGQFAVQV 276
            V+V    GG G  AVQ+
Sbjct: 170 TVVVI-GVGGLGHIAVQI 186

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEM 64
           K   I+N+ S AGL        Y+ASK  ++  T++L      +GIR+N + P ++ T M
Sbjct: 134 KKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM 193

Length = 251

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 179 PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT---FGSYAEFTMVPSKHILPVARPD--- 232
           PF  GFEA G++ AVG  V  + VG      T    G +A    VP   +  V +P    
Sbjct: 38  PFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQV--VRKPASLS 95

Query: 233 -PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
             E  A+    LT   A  +AG A G+ +L+  A GGTG  AVQ
Sbjct: 96  FEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQ 139

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 28/144 (19%)

Query: 160 VNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------- 208
           +  +       G     +LP   G E  G++  VG  V  VKVG    +           
Sbjct: 11  LCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCEL 70

Query: 209 -------------MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTS--GLTASIALEQAG 253
                           G +AE+ +VP+ +++P+        A L      TA  AL +AG
Sbjct: 71  CRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAG 130

Query: 254 PAS-GKKVLVTAAAGGTGQFAVQV 276
               G  VLV   AGG G  A Q+
Sbjct: 131 VLKPGDTVLVL-GAGGVGLLAAQL 153

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 61.6 bits (150), Expect = 5e-11
 Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGT---PAAIMTFGSYAEFTMVPSKHILPVARPD- 232
            LP+  G E  G++ AVG  V+   +G           G YAE  +     + PV  PD 
Sbjct: 58  ELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV--PDG 115

Query: 233 ---PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
                 VA++  G TA   L+ A    G  VLVTAAAGG G   VQ
Sbjct: 116 LDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQ 161

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           G I+N  S AGL       IY+ASK  V+  T+S    Y +KGIR+N +CP  + T+M
Sbjct: 137 GAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194

Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           M   +  G IIN+ S  GL        Y+ASK GV+ FT+SL      + I +N + P F
Sbjct: 122 MIKQRS-GRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGF 180

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
           + T+M  K++ K    +   +P+
Sbjct: 181 IDTDMTDKLSEKVKKKILSQIPL 203

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 60.5 bits (148), Expect = 1e-10
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 20/105 (19%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD--------- 232
           G E  G++ AVG  V   KVG    A++  G YAE+ +VP+  +LPV  P+         
Sbjct: 62  GLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV--PEGLSLVEAAA 119

Query: 233 -PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQ 275
            PEV        TA   L +  G  +G+ VL+   A G G  A+Q
Sbjct: 120 LPEVF------FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARPDP--- 233
           LP   G EAVG++ AVG+ V  ++VG   A+    G++AE+ + P+  ++P+  PD    
Sbjct: 58  LPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL--PDGISD 115

Query: 234 EVVAMLTSG-LTASIALEQAGPASGKKVLVTAAAGGTG 270
           EV A L +  L+A + L+  G   G+ ++  AA G  G
Sbjct: 116 EVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVG 153

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 1   MQAAKKPGVIINMGSSAGL---YPMYNDPI-YSASKGGVVLFTRSL-TPYKRKGIRINVL 55
               +  G IIN+ S AGL    P   D I Y+ SKG V+ FTR+L   +   GIR+N +
Sbjct: 135 SMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAI 194

Query: 56  CPEFVQTEMGLKVASKFIDLMGGFVPM 82
            P F  T+M      +  + +    P+
Sbjct: 195 APGFFPTKMTRGTLERLGEDLLAHTPL 221

Length = 259

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +K G I+N+ S AGL P      YSASK  +  F+R+L   YK +GI +  L P  V T
Sbjct: 128 KRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLPYLVAT 187

Query: 63  EM 64
           +M
Sbjct: 188 KM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVG-TPAAIMTFGSYAEFTMVPSKHILPVARP-DPE 234
            LP   G E VG++  VG  V+ + VG     +   G++ E+ + P+  ++PV      E
Sbjct: 55  PLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDE 114

Query: 235 VVAMLT-SGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQ 275
             AML  + LTA + L +      G  V+  AA    G+  +Q
Sbjct: 115 QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQ 157

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 58.4 bits (142), Expect = 8e-10
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 30/134 (22%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT--------------------------PA 206
           D G +LP   G E VG + AVG    +VKVG                             
Sbjct: 61  DRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGR 120

Query: 207 AIMTF--GSYAEFTMVP-SKHILPVARPDPEVVAMLT-SGLTASIALEQAGPASGKKVLV 262
           A+  F  G YAE+ +VP S++++     DP + A L  SGLTA  A+++  P    + +V
Sbjct: 121 ALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVV 180

Query: 263 TAAAGGTGQFAVQV 276
              AGG G  A+ +
Sbjct: 181 IIGAGGLGLMALAL 194

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 32/138 (23%)

Query: 170 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------------- 208
            G+    +LP   G E VG +  VG+ V  +KVG    +                     
Sbjct: 49  KGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLC 108

Query: 209 --------MTFGSYAEFTMVPSKHILPV-ARPDPEVVA-MLTSGLTASIALEQAGPASGK 258
                    T G YAE+ +VP+++++ +    D    A +L +G+T   AL++A    GK
Sbjct: 109 PNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGK 168

Query: 259 KVLVTAAAGGTGQFAVQV 276
            V V   AGG G  AVQ 
Sbjct: 169 WVAVV-GAGGLGHMAVQY 185

Length = 339

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 56.7 bits (138), Expect = 1e-09
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           M  A+  G I+N+ S +G+        YSA+K GV+ FT++L      +GI +N + P F
Sbjct: 128 MIKARY-GRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGF 186

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
           + T+M   +  +    +   +P+
Sbjct: 187 IDTDMTEGLPEEVKAEILKEIPL 209

Length = 246

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           ++ G IIN+ S  GL        Y+ASK GV+ FT+SL      +GI +N + P F+ T+
Sbjct: 126 RRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVAPGFIDTD 185

Query: 64  MGLKVASKFIDLMGGFVPM 82
           M   +  K  + +   +P+
Sbjct: 186 MTDALPEKVKEKILKQIPL 204

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM 64
           ++ G I+N+ S AG+ P Y   IY A K  V+  T+ L       IR+N + P FV+T++
Sbjct: 131 REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190

Query: 65  G 65
           G
Sbjct: 191 G 191

Length = 252

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.6 bits (135), Expect = 3e-09
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           +K GVI+N+ S  GL     + +YSASKG V  FT++L       GIR+N + P  + TE
Sbjct: 132 RKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191

Query: 64  MG 65
           M 
Sbjct: 192 MW 193

Length = 247

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAML- 239
           G++A G++       +   VG     +   G++AE   VP+  +  +         A L 
Sbjct: 56  GWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLP 115

Query: 240 TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
            +G+TA  AL + GP  G++VLVT A+GG G+FAVQ
Sbjct: 116 VAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQ 151

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 56.0 bits (136), Expect = 4e-09
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 35/133 (26%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------------------- 208
            +LP   G E  G++ AVG  V+ +KVG    +                           
Sbjct: 54  PKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS 113

Query: 209 --MTFGSYAEFTMVPSKHILPVARPD---PEVVA-MLTSGLTASIALEQAGPASGKKVLV 262
                G++AE+ +  ++++ P+  PD    E  A +L +G+T   AL++AG   G  V++
Sbjct: 114 GYTVDGTFAEYAIADARYVTPI--PDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVI 171

Query: 263 TAAAGGTGQFAVQ 275
           + A GG G   VQ
Sbjct: 172 SGAGGGLGHLGVQ 184

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M      G IIN+GS+AGL P     +YSA+K  V+ F+ +L    K  G+++  +CP  
Sbjct: 130 MVERGA-GHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGP 188

Query: 60  VQTEMGLKVASK 71
            +TE      S 
Sbjct: 189 TRTEFFDAKGSD 200

Length = 265

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 32/133 (24%)

Query: 175 GSRLPFDAGFEAVGLIAAVGDSVNNVKVGT-------------------------PAAIM 209
           GS+ P   G E VG +  VG  V   KVG                            A+ 
Sbjct: 50  GSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN 109

Query: 210 T----FGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVT 263
           T     G YAE+ +  +++ + +    P  +   +L +G+T   AL  AGP  G++V V 
Sbjct: 110 TGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVL 169

Query: 264 AAAGGTGQFAVQV 276
              GG G  AVQ 
Sbjct: 170 -GIGGLGHLAVQY 181

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 30/128 (23%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAA----------------------------IM 209
           +P   G E  G++  VGD V  VK G                                ++
Sbjct: 54  MPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVV 113

Query: 210 TFGSYAEFTMVPSKHILPV-ARPDPEVVAMLTSG-LTASIALEQAGPASGKKVLVTAAAG 267
           + G YAE+ +VP K++  +      E+ A L    LTA  AL+ AG   G+ V+V  A+G
Sbjct: 114 SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASG 173

Query: 268 GTGQFAVQ 275
            TG FAVQ
Sbjct: 174 NTGIFAVQ 181

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 30/129 (23%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-------------------------- 211
            P   G E VG +  VG+ V   K G    +  +                          
Sbjct: 54  YPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEE 113

Query: 212 --GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAG 267
             G +AE+  VP + ++ +     +  A L + +  +   AL++AG   G  VLVT A G
Sbjct: 114 VDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGG 173

Query: 268 GTGQFAVQV 276
           G G  A+Q+
Sbjct: 174 GVGIHAIQL 182

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 32/141 (22%)

Query: 167 YFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG----------------------- 203
               G    ++LP   G E  G +  VG  V N KVG                       
Sbjct: 45  ILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGN 104

Query: 204 -----TPAAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAMLT-SGLTASIALEQAGPAS 256
                    +   G +AE+ +VP++ ++PV         A+ T + LT   A+ +AG   
Sbjct: 105 LCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVK 164

Query: 257 -GKKVLVTAAAGGTGQFAVQV 276
            G+ VLV    GG G  AVQ+
Sbjct: 165 PGETVLVIGL-GGLGLNAVQI 184

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 7/61 (11%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEFVQTE 63
           G I+N+ S+AGL P      Y+ASKG V+  T++    L P     IR+N + P  V+T 
Sbjct: 134 GAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGP---DKIRVNAVAPVVVETG 190

Query: 64  M 64
           +
Sbjct: 191 L 191

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.8 bits (125), Expect = 8e-08
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 8   GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLCPEFVQT 62
           G I+N+ S AGL         Y+A+K G+V  T++L      Y   GI +N++ P  + T
Sbjct: 136 GRIVNISSVAGLPGWPGRSN-YAAAKAGLVGLTKALARELAEY---GITVNMVAPGDIDT 191

Query: 63  EMGLKVASKFIDLMGGFVPM 82
           +M      +  +      P+
Sbjct: 192 DMKEATIEEAREAKDAETPL 211

Length = 249

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD--------- 232
           G E  G + AVG+ V+  KVG    A++  G YAE+  VP+  +LPV  P+         
Sbjct: 62  GLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV--PEGLSLVEAAA 119

Query: 233 -PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQV 276
            PE    + S L      ++ G  +G+ VL+   A G G  A+Q+
Sbjct: 120 LPETFFTVWSNL-----FQRGGLKAGETVLIHGGASGIGTTAIQL 159

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G IIN+ S          P Y+ASKGGV   T++L T + R GI++N + P +  TE
Sbjct: 131 QGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPGYFATE 190

Query: 64  MGLKVAS 70
           M   V +
Sbjct: 191 MTEAVVA 197

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
            AK  G ++ + S A L  +     YSASK  +     SL    K++GIR+ V+ P F+ 
Sbjct: 122 RAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFID 181

Query: 62  TEMGLKVASKF 72
           T +   + +  
Sbjct: 182 TPLTANMFTMP 192

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M   K  G IIN+GS AG YP     +Y A+K  V  F+  L       GIR+ V+ P  
Sbjct: 127 MVERKS-GHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGL 185

Query: 60  VQTE 63
           V+T 
Sbjct: 186 VETT 189

Length = 246

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGL 66
           G IIN+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T M  
Sbjct: 134 GRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 193

Query: 67  KVASKFIDLMG 77
            V   + D+  
Sbjct: 194 SVREHYADIWE 204

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT 62
            K  G IIN+ S AGL  +    +Y  SK  VV  TR++   + R GI +N +CP ++ T
Sbjct: 142 TKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDT 201

Query: 63  EM 64
           E+
Sbjct: 202 EI 203

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQ 61
              + GVI+N+GS A L  +     Y ASK  V + +RSL   +   GIR+N + P +++
Sbjct: 389 LMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIE 448

Query: 62  T 62
           T
Sbjct: 449 T 449

Length = 520

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 30/131 (22%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------------ 211
            + P   G E VG +  VG++V   K G   A + +                        
Sbjct: 52  MKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYG 111

Query: 212 ----GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASI--ALEQAGPASGKKVLVTAA 265
               G +AE+  V    ++ V     +  A++   +T  +   L +AG   G+ VLVT A
Sbjct: 112 EELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGA 171

Query: 266 AGGTGQFAVQV 276
            GG G  A+QV
Sbjct: 172 GGGVGIHAIQV 182

Length = 334

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT 62
            +K G+IINM S A          Y+ASK  +  FT+ L   Y + GI++  + P  V+T
Sbjct: 116 ERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKT 175

Query: 63  EMGLKVASKFID 74
            M    A+ F  
Sbjct: 176 PMT---AADFEP 184

Length = 235

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 26/122 (21%)

Query: 179 PFDAGFEAVGLIAAVGDSVNNVKVGT---------PAAIMTFGSYAEFTMVPSKHILPVA 229
           P   G +  G +  VG  V   KVG                 G++ E+ +  +     + 
Sbjct: 55  PAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI- 113

Query: 230 RPD----PEVVAMLTSGLTASIAL-----------EQAGPASGKKVLVTAAAGGTGQFAV 274
            PD     E   +    +TA++AL           + +  + GK VL+   +   G  A+
Sbjct: 114 -PDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAI 172

Query: 275 QV 276
           Q+
Sbjct: 173 QL 174

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 18/105 (17%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK---GIRINVLCPEFVQTEM 64
           G IINM S  GL        Y+ASKG V   T+S          GIR+N + P ++ T M
Sbjct: 131 GSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPGYIYTPM 190

Query: 65  -------GLKVASKFIDLMGGF-VPME---MVVKGAFELITDESK 98
                    ++ +     MG    P E    VV     L +DES 
Sbjct: 191 TDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVY----LASDESS 231

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 17/113 (15%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVG-----TPAAI-MTFGSYAEFTMVPSKHILPVAR 230
            LP   G +  G++ AVG+ V   +VG         +    GS AE+ +V ++ +     
Sbjct: 56  PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK-- 113

Query: 231 PDPEVVAMLTS------GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
             P  ++M  +      G+TA   L ++A   +G+ VL+   AGG G  AVQ+
Sbjct: 114 --PANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQL 164

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 21/134 (15%)

Query: 157 YGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIM 209
           Y  VN+  G     G  I  R PF  G +  G +          GD V  +       + 
Sbjct: 36  YSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESNDPRFKPGDEV--IVTSYDLGVS 93

Query: 210 TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIA---LEQAG--PASGKKV 260
             G Y+E+  VP++ ++P+  P      E + + T+G TA+++   LE+ G  P  G  V
Sbjct: 94  HHGGYSEYARVPAEWVVPL--PKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGP-V 150

Query: 261 LVTAAAGGTGQFAV 274
           LVT A GG G  AV
Sbjct: 151 LVTGATGGVGSLAV 164

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 49.8 bits (120), Expect = 5e-07
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 25/117 (21%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-------MTFGSYAEFTMVPSKHILPVA 229
             P   G +A G + +  D     + G    +        T G +AE+  VP+  ++P+ 
Sbjct: 56  NYPHTPGIDAAGTVVSSDD--PRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL- 112

Query: 230 RPDPEVV----AML--TSGLTASIA---LEQAG--PASGKKVLVTAAAGGTGQFAVQ 275
              PE +    AM+  T+G TA+++   LE  G  P  G  VLVT A GG G  AV 
Sbjct: 113 ---PEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVA 165

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           GVIIN+ S+AGL P      Y+ASKG VV  T+++      + IR+N LCP   +T +
Sbjct: 132 GVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCPVAGETPL 189

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           M        I+N+ S AGL  +     YSASK  V+  TRSL   +  KGIR+N + P +
Sbjct: 127 MIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGY 186

Query: 60  VQTEM--GLKVASKF-IDLMGGFVPM 82
           V+T+M   L+ A K     +   +P+
Sbjct: 187 VRTQMVAELERAGKLDPSAVRSRIPL 212

Length = 520

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT- 62
           ++ G IIN  S +G         Y+A+KG V+ FT+S+   Y R GIR N + P  ++T 
Sbjct: 131 EQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190

Query: 63  -----------EMGLKV--ASKFIDLMGGFVPMEMVVKGAFELITDESK--AGSCLWITN 107
                      E G       K++  +G     E V K    L +D+S    G    I  
Sbjct: 191 LVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGET--IRI 248

Query: 108 RRG-MEY-WP 115
             G M Y WP
Sbjct: 249 DGGVMAYTWP 258

Length = 272

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 17/117 (14%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLC 56
           M A   PG I+N+ S A    + N  +Y ++K  + + T+     L P+K   IR+N + 
Sbjct: 122 MIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHK---IRVNSVN 178

Query: 57  PEFVQTEMGLKVAS------KFIDLM--GGFVPMEMVVKGAFELITDESK--AGSCL 103
           P  V T+MG    S      K ++ +  G F  +E VV     L++D+S    GS L
Sbjct: 179 PTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGSTL 235

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY-KRKGIRINVLCPEFVQTE 63
           +K G IIN+ S     P+   P YSA+K  V  FT+ L       G+R+N + P F  T 
Sbjct: 145 QKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATTGVRVNAIAPGFFVTP 204

Query: 64  MGLKV 68
              K+
Sbjct: 205 QNRKL 209

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
            A+K G IINM S A    +   P   +YS +K  V+  T+S+   + ++GIR N +CP 
Sbjct: 117 LARKDGSIINMSSVAS--SIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPG 174

Query: 59  FVQTEM 64
            V T  
Sbjct: 175 TVDTPS 180

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 1   MQAAKKPGVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCP 57
           ++A+   GVII + S AG   YP      Y+ASK  VV   +SL       GIR+N + P
Sbjct: 133 LKASGHGGVIIALSSVAGRLGYPGRTP--YAASKWAVVGLVKSLAIELGPLGIRVNAILP 190

Query: 58  EFVQTEMGLKVASKFIDLMG-GFVPME 83
             V+     +V       +G G   ME
Sbjct: 191 GIVRGPRMRRVIEARAQQLGIGLDEME 217

Length = 264

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           G ++N+GS  G+      P YSA+K G++ +T+ L   Y R GIR N + P  V+T+
Sbjct: 129 GAVVNIGSVNGMA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQ 184

Length = 257

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVG---TPAAIMTFGSYAEFTMVPSKHILPV-ARP 231
              P   G E VG +  VG  V ++K G    P      G++    +VP+  ++ V    
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLR-PGLGTWRTHAVVPADDLIKVPNDV 119

Query: 232 DPEVVAMLTSG-LTASIALEQAGPASGKKVLV-TAAAGGTGQFAVQ 275
           DPE  A L+    TA   LE          ++   A    GQ  +Q
Sbjct: 120 DPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQ 165

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTPA-AIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAML 239
           G E  G +  VG  V   K G    A++  G YAE+ +    H++ + +     E  A+ 
Sbjct: 63  GLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIP 122

Query: 240 TSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQ---VYFQI 280
            + LTA   L++ G    G+ VL+ A A G G  A Q    Y   
Sbjct: 123 EAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA 167

Length = 334

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 1   MQAA----KKPGV---IINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRI 52
           +QAA    KK G    IIN  S AG+    N   YSASK  V   T++       KGI +
Sbjct: 119 IQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITV 178

Query: 53  NVLCPEFVQTEMGLKVASKFIDLMGG 78
           N   P  V+TEM   +  +  ++ G 
Sbjct: 179 NAYAPGIVKTEMWDYIDEEVGEIAGK 204

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 21/116 (18%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLC 56
           M      G II   S AGL  +     Y+A+K G+V  T++L      Y   GIR+N + 
Sbjct: 139 MIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANELAEY---GIRVNSIH 195

Query: 57  PEFVQT---------EMGLK---VASKFID--LMGGFVPMEMVVKGAFELITDESK 98
           P  V T         E  LK    A  F+    + GFVP E V      L +DES+
Sbjct: 196 PYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVADAVLWLASDESR 251

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 9/65 (13%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-----GIRINVLCPE 58
           A+  G IIN+GS AG YP     +Y A+K  V  F+ +L    RK     GIR+  + P 
Sbjct: 127 ARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNL----RKDLIGTGIRVTNIEPG 182

Query: 59  FVQTE 63
            V+TE
Sbjct: 183 LVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G IIN+ S  G    +    YSA+K G++ FT++L      KG+ +N + P ++ T+M +
Sbjct: 130 GRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM 189

Query: 67  KVASKFIDLMGGFVPM 82
            +    ++ +   +P+
Sbjct: 190 AMREDVLNSIVAQIPV 205

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 8   GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           G I+   S AG          Y+ASK G+V FTR+L      + I +N + P  V T M
Sbjct: 135 GRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193

Length = 251

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 46.8 bits (112), Expect = 5e-06
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 12/73 (16%)

Query: 211 FGSYAEFTMVPSKHILPVARPDP----EVVAMLTSGLTAS---IALEQAG--PASGKKVL 261
           +G YA+   V +  ++P+  P+     + +A+ T+G TA    +ALE  G  P  G  VL
Sbjct: 95  WGGYAQRARVKADWLVPL--PEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGP-VL 151

Query: 262 VTAAAGGTGQFAV 274
           VT AAGG G  AV
Sbjct: 152 VTGAAGGVGSVAV 164

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +    I+N+ S     PM  +P+Y A+K  +  +T +L    K  G+ +  + P  V T
Sbjct: 128 KQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDT 187

Query: 63  EMGLKVASK 71
           E+  +  + 
Sbjct: 188 ELHEERRNP 196

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM-- 64
             +IN  SS+ +Y   +  +YSA+K  V   T +L   + R GIR+  + P FV T +  
Sbjct: 128 ARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPILT 187

Query: 65  GLKVASKFIDLMGGFVPMEMVVKGAFE 91
             +  +     +G  +P+  V K  + 
Sbjct: 188 KGETGAAPKKGLGRVLPVSDVAKVVWA 214

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPI-YSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           M    K G IIN  S   +       I Y+ASKGGV+  +R L   + R+GIR+N LCP 
Sbjct: 127 MVRQGK-GSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPG 185

Query: 59  FVQT 62
            V T
Sbjct: 186 PVNT 189

Length = 255

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 7   PG-VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           PG  +IN  S++ +Y      +YSA+K  V   T +L   ++R GIR+  + P FV T M
Sbjct: 127 PGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186

Length = 260

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-GIRINVLCPEFVQTE 63
           ++ G IIN+ S+AG         YSASK GV+  T SL    RK  IR+  L P  V T+
Sbjct: 133 RQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATD 192

Query: 64  M 64
           M
Sbjct: 193 M 193

Length = 239

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEM 64
           G IIN+ S  GL   +    YSA+K G++ FT++L +   R GI +N + P ++ T M
Sbjct: 132 GRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189

Length = 245

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 18/115 (15%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGT----PAAIMTFGSYAEFTMVPSKHILPVAR-PD----P 233
           G++A G++ AVGD V   K G        I   GS AEF +V  +    V   P      
Sbjct: 63  GWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDER---IVGHKPKSLSFA 119

Query: 234 EVVAMLTSGLTA------SIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG 282
           E  A+  + +TA       + +        + +L+   AGG G   +Q+  Q+ G
Sbjct: 120 EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTG 174

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAMLTS 241
           G+ +VG +  VG  V   K G       FG +AE  +VP+  ++P+     PE  A+   
Sbjct: 25  GYSSVGRVVEVGSGVTGFKPGDRVF--CFGPHAERVVVPANLLVPLPDGLPPERAALTAL 82

Query: 242 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
             TA   +  A P  G++V V    G  G  A Q
Sbjct: 83  AATALNGVRDAEPRLGERVAVV-GLGLVGLLAAQ 115

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT 62
           A   G I+ + S AG+  + +   Y A+KG +   TRSL   + +  IR+N + P  + T
Sbjct: 132 ASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAPWVIAT 191

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 4   AKKPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQ 61
             K G I+N+ S+AG+         Y+ +K G+++ TR L     + GIR+N + P +V+
Sbjct: 127 LSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVE 186

Query: 62  TEMGL 66
           T+M L
Sbjct: 187 TDMTL 191

Length = 255

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           A+K G I+ M S  G   M  DP    Y+ +K  +V  T+SL   Y + GIR+N +CP +
Sbjct: 130 ARKDGRIVMMSSVTG--DMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGY 187

Query: 60  VQTEMGLKVA--------SKFIDLMGGFVPM 82
           V+T M   +A           +  M   +P+
Sbjct: 188 VRTPMAESIARQSNPEDPESVLTEMAKAIPL 218

Length = 263

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY-KRKGIRINVLCPEFVQ 61
             +K G IIN+ S     P+   P YSA+K  +  FT+ L  +  + GIR+N + P F  
Sbjct: 149 VGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFL 208

Query: 62  TE 63
           TE
Sbjct: 209 TE 210

Length = 278

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 19/104 (18%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-----GIRINVLCPEFVQT 62
           G ++ + S +G   +  +  YSASK  +     +L    R+     G+R++ +CP FV T
Sbjct: 125 GRVVFLNSLSGKRVLAGNAGYSASKFALRALAHAL----RQEGWDHGVRVSAVCPGFVDT 180

Query: 63  EMGLKVASKFIDLMGGFVPMEM-----VVKGAFELITDESKAGS 101
            M        + L+G F P EM     +      +I       S
Sbjct: 181 PMAQG-----LTLVGAFPPEEMIQPKDIANLVRMVIELPENITS 219

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 39/141 (27%)

Query: 172 NDIGSRLPFD-AGFEAVGLIAAVGDSVNNVKVGTPAAIM--------------------- 209
              G   P+   G +A G++ AVG+ V N KVG    +                      
Sbjct: 74  QRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPS 133

Query: 210 --------TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPAS- 256
                    +GS+A+F +V +  ++P  +P      E  A +  G TA   L    P + 
Sbjct: 134 QRIWGYETNYGSFAQFALVQATQLMP--KPKHLSWEEAAAYMLVGATAYRMLFGWNPNTV 191

Query: 257 --GKKVLVTAAAGGTGQFAVQ 275
             G  VL+  A+GG G  A+Q
Sbjct: 192 KPGDNVLIWGASGGLGSMAIQ 212

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 8   GVIINMGSSAGLYPMYNDPI----YSASKGGVVLFT----RSLTPYKRKGIRINVLCPEF 59
           GVIIN  S A     +   I    YSASKGG+V  T    R L P   +GIR+  + P  
Sbjct: 139 GVIINTASVAA----FEGQIGQAAYSASKGGIVGMTLPIARDLAP---QGIRVVTIAPGL 191

Query: 60  VQTEMGLKVASKFIDLMGGFVP 81
             T +   +  K  D +   VP
Sbjct: 192 FDTPLLAGLPEKVRDFLAKQVP 213

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 28/86 (32%)

Query: 171 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------- 211
           G     +LP   G E  G++  VG  V  +KVG    +                      
Sbjct: 23  GEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLCPN 82

Query: 212 ---------GSYAEFTMVPSKHILPV 228
                    G +AE+ +VP+++++P+
Sbjct: 83  GKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 34/123 (27%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF--- 211
           R P   G E  G++ AVG  V  +  G   A+                      M F   
Sbjct: 52  REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGS 111

Query: 212 --------GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASI-ALEQAGPASGKKVLV 262
                   G + E+ +V +   +P+        A L   L  ++ A+ +AG  +GK+VLV
Sbjct: 112 AMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLV 171

Query: 263 TAA 265
           T A
Sbjct: 172 TGA 174

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
             G IINM S     P      Y+ASKGGV L T +L   Y  KGIR+N + P  + T +
Sbjct: 136 IKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195

Query: 65  GLKVASKFID 74
               A KF D
Sbjct: 196 N---AEKFAD 202

Length = 261

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 10/117 (8%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDS-VNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVA 229
                LP   GFE  G + A G   +    +G   A +   +G+YAE+ +  ++  LP+ 
Sbjct: 55  GSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPL- 113

Query: 230 RPD----PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG 282
            PD     +  +   + LTA   LE A     K V+ TAAA   G+  V+   +  G
Sbjct: 114 -PDGVSFEQGASSFVNPLTALGMLETAREEGAKAVVHTAAASALGRMLVR-LCKADG 168

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLC 56
           M AA + G I+N+ S A L  + +   Y ASK  +   TR L     P+   GIR+N + 
Sbjct: 123 MIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH---GIRVNSVN 179

Query: 57  PEFVQTEM 64
           P    T M
Sbjct: 180 PTVTLTPM 187

Length = 245

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGT----PAAIMTFGSYAEFTMVPSKHILPVAR-P----DP 233
           G++A G++ AVG  V   KVG        I   GS AE+ +V  + I  V   P      
Sbjct: 64  GWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDER-I--VGHKPKSLSFA 120

Query: 234 EVVAM-LTSGLTA------SIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
           E  A+ LTS LTA       + + +     GK +L+   AGG G  A+Q
Sbjct: 121 EAAALPLTS-LTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQ 168

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 6   KPGVIINMGSSAGLYP---MYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQ 61
           K G I+N+ S AGL     M +   Y+ +K GVV  + +L        I ++V+CP F Q
Sbjct: 127 KSGRIVNIASMAGLMQGPAMSS---YNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQ 183

Query: 62  TEMG 65
           T + 
Sbjct: 184 TNLL 187

Length = 270

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGL 66
           G I+N+ S AG         Y ASK  +   TR+L    +  GIR N L P  + T + L
Sbjct: 130 GSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPLLL 189

Query: 67  KVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWIT 106
              + F   +G      ++ +    L   E  A + +++ 
Sbjct: 190 AKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLL 229

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S A       + +Y+A KGG+V F++++   + R GI +NV+CP    T 
Sbjct: 129 RGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA 188

Query: 64  M 64
           +
Sbjct: 189 L 189

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
             ++PG I+ + S A L  +Y    Y  SK  +     SL    K   IR++V+ P    
Sbjct: 129 KEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSVVYPPDTD 188

Query: 62  TEM 64
           T  
Sbjct: 189 TPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 5   KKPGVIINMGSSAGL----YPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +K G IIN+GS A +     P+Y   +Y+A+K  +  F+R L   YK+ GI +    P +
Sbjct: 183 RKKGAIINIGSGAAIVIPSDPLY--AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240

Query: 60  VQTEM 64
           V T+M
Sbjct: 241 VATKM 245

Length = 320

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 12/103 (11%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTP-AAIM-----TF-GSYAEFTMVPSKHILPVARPDP-- 233
           G EAVG +            G   A  M     TF GSYAE+T+VP++ +  +       
Sbjct: 61  GIEAVGEVEE--APGGTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWA 118

Query: 234 EVVAMLTSGLTASIALEQA-GPASGKKVLVTAAAGGTGQFAVQ 275
           E+ A+  +  TA  +L ++ G   G  +L+       G  A++
Sbjct: 119 ELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALK 161

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 32/131 (24%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-----------------------MTF-- 211
           +LP   G E VG + AVG  V    VG    +                         F  
Sbjct: 57  KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTG 116

Query: 212 ----GSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA 265
               G YAE+ +   +   P+     D E   +L +G+    AL+ AG   G+++ +   
Sbjct: 117 YTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLY-G 175

Query: 266 AGGTGQFAVQV 276
            G +   A+Q+
Sbjct: 176 FGASAHLALQI 186

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 39/136 (28%), Positives = 52/136 (38%), Gaps = 39/136 (28%)

Query: 178 LPFD-AGFEAVGLIAAVGDSVNNVKVGTPAAI-----------------MT--------- 210
           LPF   G +A G++  VG  V   KVG                      M          
Sbjct: 76  LPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGY 135

Query: 211 ---FGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPAS---GKKV 260
              FGS+AEF +V    ++P  +P      E      +G TA   L    PA+   G  V
Sbjct: 136 ETNFGSFAEFALVKDYQLMP--KPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGDNV 193

Query: 261 LVTAAAGGTGQFAVQV 276
           L+  AAGG G +A Q+
Sbjct: 194 LIWGAAGGLGSYATQL 209

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLCPEF 59
            +  G I+ + S AGL        Y ASK   V F  SL      Y + GI+  ++CP F
Sbjct: 124 ERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLVCPYF 183

Query: 60  VQTEMGLKVASKF 72
           + T M   V +  
Sbjct: 184 INTGMFQGVKTPR 196

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 12/75 (16%)

Query: 210 TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASI---ALEQAG--PASGKKV 260
             G Y+++  VP+  ++P   P+     E +A+ T+G TA++   ALE+ G  P  G  V
Sbjct: 93  HDGGYSQYARVPADWLVP--LPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP-V 149

Query: 261 LVTAAAGGTGQFAVQ 275
           LVT A GG G  AV 
Sbjct: 150 LVTGATGGVGSLAVA 164

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
            + +K  G IINM S     P      Y+ASKGGV + T++L   Y  KGIR+N + P  
Sbjct: 127 FRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGA 186

Query: 60  VQTE 63
           + T 
Sbjct: 187 INTP 190

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 2   QAAKK---PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCP 57
           +AAK+    G IIN+ SS       N   Y+ SK  V  FTR L      +GI +N + P
Sbjct: 122 EAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAP 181

Query: 58  EFVQTEM 64
             V T+M
Sbjct: 182 GPVDTDM 188

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 179 PFDAGFEAVGLIAAVGDSVNN--VKVGTPAAIMTFGSYAEFTMVPSKHILPV----ARPD 232
           P + G   VG   A   + N+   + G    ++    + E+ +   + +  +    A   
Sbjct: 68  PVELGEVMVGGTVAKVVASNHPGFQPGD--IVVGVSGWQEYAISDGEGLRKLDPSPAPLS 125

Query: 233 PEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQV 276
             +  +   GLTA   L   G P +G+ V+V+AAAG  G    Q+
Sbjct: 126 AYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI 170

Length = 340

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMG 65
           G I+N+ S  G         Y  SK  +   TR L    K  GI++N  CP +V+T+MG
Sbjct: 131 GRIVNVSSGLGSL----TSAYGVSKAALNALTRILAKELKETGIKVNACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS 41
            +  GVI+NM S AGL        Y+A+K  +  FTRS
Sbjct: 134 KQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRS 171

Length = 266

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           M+     G I+N+ S     P  N  + + ++ G++   ++L+      G+ +N + P +
Sbjct: 124 MKERGW-GRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLPGY 182

Query: 60  VQTE 63
           + TE
Sbjct: 183 IDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G II++ S  G    +    YSA+K G++ FT+SL     +  + +N +CP F+ TEM  
Sbjct: 136 GRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA 195

Query: 67  KV 68
           +V
Sbjct: 196 EV 197

Length = 247

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G I+N+ S AG+  +     Y ASK GVV  T+ L   +   GI +N + P  V TE+G 
Sbjct: 141 GKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK 200

Query: 67  K 67
           K
Sbjct: 201 K 201

Length = 255

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G I+N+ S   L+       Y ASKG V+  TRSL      +GI +N + P    TE   
Sbjct: 136 GRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATA 195

Query: 67  KVAS 70
            V +
Sbjct: 196 YVPA 199

Length = 250

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPA--AIMTFGSYAEFTMVPSKH--ILPVARPDP 233
           LP   G EA G+++ VG  V ++KVG     A    G+Y+    VP+    ILP A    
Sbjct: 57  LPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFE 116

Query: 234 EVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQ 275
           +  A    GLT    L +       ++ L  AAAGG G  A Q
Sbjct: 117 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159

Length = 327

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGL 66
           G ++N+ S AG  P+     Y ASK  VV FT +     +  G+ ++V+ P FV TE+  
Sbjct: 130 GHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL-- 187

Query: 67  KVASKFIDLMGGFVPME 83
                      GF  +E
Sbjct: 188 ---IAGTGGAKGFKNVE 201

Length = 273

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL----TPYKRKGIRINVLC 56
           M+     G I+N+ S AGL P      Y ASK  +   + SL     P+   GI++ ++ 
Sbjct: 120 MRKQGS-GRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPF---GIKVTIIE 175

Query: 57  PEFVQTEMGLKVASKF 72
           P  V+T      A   
Sbjct: 176 PGPVRTGFADNAAGSA 191

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY---KRKGIRINVLCPEFV 60
           A +P  I+N+ S A      +   Y+ASK  V   T+S+      +   +R N + P F+
Sbjct: 127 ASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFI 186

Query: 61  QT 62
           +T
Sbjct: 187 RT 188

Length = 251

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 6   KPG-VIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           K G  IIN GS  G        D  YSA+KG +  FTRSL     +KGIR+N + P
Sbjct: 172 KQGSAIINTGSITGYEGNETLID--YSATKGAIHAFTRSLAQSLVQKGIRVNAVAP 225

Length = 290

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 43/140 (30%)

Query: 176 SRLPFDAGFEAVGLIAAVGDSVNNVKVG-------------------------------- 203
           ++ P   G E VG++ AVG  V   KVG                                
Sbjct: 51  TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVT 110

Query: 204 ----TPAAIMTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPA 255
                P   +T G YA+  +V  + +  +  P   D    A +L +G+T    L++ G  
Sbjct: 111 YNGKYPDGTITQGGYADHIVVDERFVFKI--PEGLDSAAAAPLLCAGITVYSPLKRNGVG 168

Query: 256 SGKKVLVTAAAGGTGQFAVQ 275
            GK+V V    GG G  AV+
Sbjct: 169 PGKRVGV-VGIGGLGHLAVK 187

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 39/139 (28%), Positives = 50/139 (35%), Gaps = 34/139 (24%)

Query: 171 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG----TPAA------------------- 207
           G+D    LP   G E  G++  VG+ V+  +VG     P                     
Sbjct: 47  GHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEH 106

Query: 208 --IMTF---GSYAEFTMVPSKHILPVARPD---PEVVAMLTSGL-TASIAL-EQAGPASG 257
                F   GS+AE+  VP   +  V  PD       A L     TA  AL  QA    G
Sbjct: 107 QVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPG 166

Query: 258 KKVLVTAAAGGTGQFAVQV 276
           + V V    GG G  AV +
Sbjct: 167 EWVAVH-GCGGVGLSAVMI 184

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 242 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
           GLTA   L E   P  G+ V+V+AAAG  G    Q+
Sbjct: 130 GLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQI 165

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEF 59
            K  G I+N+ S AG         Y  SK  +  FTR     L P   KG+R+N + P  
Sbjct: 130 IKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAP---KGVRVNSVSPGV 186

Query: 60  VQTE----MGL--KVASKFIDLMGGFVPM 82
           + T     MG+  +   KF+       P+
Sbjct: 187 IVTGFHRRMGMPEEQYIKFLSRAKETHPL 215

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 3/112 (2%)

Query: 167 YFSDGNDIGSRLPFDAGF--EAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKH 224
            F+ G           G   E  G + A+G  V  + VG   A ++ G++AE+ +  + H
Sbjct: 38  AFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADH 97

Query: 225 ILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQV 276
            +P+                A     +    +GK V V   AG  G   +Q+
Sbjct: 98  AVPLPSLLDGQAFPGEPLGCALNVFRRGWIRAGKTVAVI-GAGFIGLLFLQL 148

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-GIRINVLCP 57
           +K G IIN  S+AGLY  +    YSA+K G++  + +L     K  I  N + P
Sbjct: 137 QKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYNITCNTIAP 190

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR----SLTPYKRKGIRINVLC 56
           M+A    GVI+N  S  G    +    Y+A+K GV+  TR        Y   G+RIN + 
Sbjct: 143 MRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEY---GVRINAVA 199

Query: 57  PEFVQTEMGLKVAS 70
           P         KV S
Sbjct: 200 PSIAMHPFLAKVTS 213

Length = 262

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT 62
           A+  G IINM S  GL        Y ++K G++  T+ +       G+ +N +CP +V T
Sbjct: 129 AQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDT 188

Length = 258

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           ++ G IIN+ S  G+        Y ASK G++ F++SL      + + +N + P F+++ 
Sbjct: 129 RRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188

Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGA 89
           M  K+  K  + + G +PM+ +  GA
Sbjct: 189 MTGKLNDKQKEAIMGAIPMKRMGTGA 214

Length = 245

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 28  YSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM 64
           Y+ASK GV+   ++L P    +GI IN + P F++T+M
Sbjct: 356 YAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM 393

Length = 450

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           G I+N+G+ A L        Y+A+K GV   T +L      +GI +N + P  + T  
Sbjct: 134 GRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191

Length = 239

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY-KRKGIRINVLCPEFVQT---- 62
           G IIN+ S   L PM ++  Y+A+KG +  FT+SL P    KGI +N + P    T    
Sbjct: 147 GRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT 206

Query: 63  -EMGLKVASKFIDLMGGF-VPMEMVVKGAFELITDESKAGSCLWIT 106
            E+   +  KF    G    P++     AF L+++E+K     WIT
Sbjct: 207 EELKHHLVPKF--PQGRVGEPVDAARLIAF-LVSEEAK-----WIT 244

Length = 256

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM-- 64
           G I+N  S   L        Y ASKG +   TR++   +   GIR+N + P  + T    
Sbjct: 133 GSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFR 192

Query: 65  ----------GLKVASKFIDLMGGFVPMEMVVKGAFELITDES 97
                      L+ A +    M  F   E V + A  L +DES
Sbjct: 193 RIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDES 235

Length = 252

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY-KRKGIRINVLCPEFVQT 62
            +    IIN+ S     PM + P+Y A+K  +  +T +L    K   + +  L P  V T
Sbjct: 128 RQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDT 187

Query: 63  EMG 65
             G
Sbjct: 188 TEG 190

Length = 245

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 39.7 bits (93), Expect = 9e-04
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 1   MQAA----KKPGV---IINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKG 49
           +QAA    KK G    IIN  S AG         YS++K  V   T++    L P   KG
Sbjct: 116 IQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAP---KG 172

Query: 50  IRINVLCPEFVQTEMGLKVASKFIDLMG 77
           I +N  CP  V+T M  ++  +  ++ G
Sbjct: 173 ITVNAYCPGIVKTPMWEEIDEETSEIAG 200

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR-SLTPYKRKGIRINVLCPEFVQTE 63
           +  G+I+N  S  G+  + N   Y+A+K GVV  TR S   Y + GIRIN + P  + T 
Sbjct: 132 QGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAILTP 191

Query: 64  M 64
           M
Sbjct: 192 M 192

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 11/64 (17%)

Query: 5   KKPGVIINMGSSAGLYP----------MYNDPIYSASKGGVVLFTRSL-TPYKRKGIRIN 53
           +  G IIN+ S  G+            MY+   YS  K G++  T+ L   Y   GIR+N
Sbjct: 132 QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYYADTGIRVN 191

Query: 54  VLCP 57
            + P
Sbjct: 192 AISP 195

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 35/134 (26%)

Query: 175 GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF- 211
           G   P   G E  G++  VG  V   KVG    +                      + F 
Sbjct: 61  GETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI 120

Query: 212 ------GSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLTASI-ALEQAGPASGKKVLV 262
                 G +AE+ +VP+ H+  +  PD  P   A L   L  +  A+ ++G   G   LV
Sbjct: 121 GLGGGGGGFAEYVVVPAYHVHKL--PDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTALV 178

Query: 263 TAAAGGTGQFAVQV 276
              AG  G   +  
Sbjct: 179 L-GAGPIGLLTILA 191

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 36/125 (28%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTPAAIM----------------------------TFGSY 214
           G E  G +  VG  V+++ VG   A+                               G++
Sbjct: 57  GHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAF 116

Query: 215 AEFTMVPSKHILPVARPD---PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGT-G 270
           AE+  VP+++++ +  PD    E  AM+     A  A+  AG   G  V+V  A  GT G
Sbjct: 117 AEYVSVPARNLIKI--PDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGA--GTIG 172

Query: 271 QFAVQ 275
             A+Q
Sbjct: 173 LLAIQ 177

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLC 56
           M A  + G IINM S AG        +Y A+K  V+  T+S    L  +   GI +N + 
Sbjct: 123 MIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH---GINVNAIA 179

Query: 57  PEFVQTEMGLKVASKFID 74
           P  V  E    V +KF  
Sbjct: 180 PGVVDGEHWDGVDAKFAR 197

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 12/70 (17%)

Query: 1   MQAAKKPGVIINMGS--SAGLYPMYNDPIYSASKGGVVLFT----RSLTPYKRKGIRINV 54
           M  +   GVIIN+ S   AG     N   YSASK GV   T    + L    R GIR+  
Sbjct: 137 MIESGSKGVIINISSIARAGNMGQTN---YSASKAGVAAMTVTWAKELA---RYGIRVAA 190

Query: 55  LCPEFVQTEM 64
           + P  ++TEM
Sbjct: 191 IAPGVIETEM 200

Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQ 61
                  I+N+GS +GL  + +   Y  +K  ++  TR+L   +   GIR+N + P +++
Sbjct: 135 KQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIR 194

Query: 62  T 62
           T
Sbjct: 195 T 195

Length = 257

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 17/107 (15%)

Query: 4   AKKPGVIINMGSSAG------LYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLC 56
                 IIN+ S  G          Y+   Y ASK  + + T+SL    KR GI +  L 
Sbjct: 124 KGARAKIINISSRVGSIGDNTSGGWYS---YRASKAALNMLTKSLAVELKRDGITVVSLH 180

Query: 57  PEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELIT--DESKAGS 101
           P +V+T+MG      F    G   P E  V G  ++I   +E  +G 
Sbjct: 181 PGWVRTDMG----GPFAKNKGPITPEE-SVAGLLKVIDNLNEEDSGK 222

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLC 56
           M    + G IINM S AG         Y A+K  V+ +T+S    L  +   GI +N + 
Sbjct: 126 MVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRH---GINVNAIA 182

Query: 57  PEFVQTEMGLKVASKF 72
           P  V T M  +V + F
Sbjct: 183 PGVVDTPMWDQVDALF 198

Length = 257

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR-KGIRINVLCPEF 59
           M  A++ G I+N+ S AG+        Y+ASK G++  T++L      +GI +N + P  
Sbjct: 133 MIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGA 192

Query: 60  VQTEM 64
           + T M
Sbjct: 193 INTPM 197

Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQT 62
            +  G IIN+ S+ GL        Y A+K G++  T+ L       GI +N +CP +V+T
Sbjct: 126 KQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPGYVRT 185

Query: 63  EMGLKVASKFIDLMGGF-VPMEMVVK 87
            +   V  +  D      +P E V++
Sbjct: 186 PL---VEKQIADQAKTRGIPEEQVIR 208

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEF 59
            ++ G I+ +GS+A   P      Y+ASK  + + T+     L PY   GIR NV+ P  
Sbjct: 123 RRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPY---GIRCNVVSPGS 179

Query: 60  VQTEM 64
             TEM
Sbjct: 180 TDTEM 184

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 5   KKPGVIINMGSSAGLY---PMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           KK   IIN  +S   Y   P   D  Y+A+KG +V FTR L      KGIR+N + P
Sbjct: 153 KKGSSIINT-TSVTAYKGSPHLLD--YAATKGAIVAFTRGLSLQLAEKGIRVNAVAP 206

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 35/132 (26%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------------------------- 209
           LP   G +  G++ AVG  V NVK G    I                             
Sbjct: 57  LPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH 116

Query: 210 TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTA 264
             G YAE+  VP++++LP+  PD     E  A   + LTA   L  +A    G+ VLV  
Sbjct: 117 VDGGYAEYVAVPARNLLPI--PDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHG 174

Query: 265 AAGGTGQFAVQV 276
           A  G G  A+Q+
Sbjct: 175 AGSGVGSAAIQI 186

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 33/142 (23%), Positives = 48/142 (33%), Gaps = 40/142 (28%)

Query: 170 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------ 211
            G+      P   G E  G I  VG  V   KVG      T                   
Sbjct: 47  KGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLC 106

Query: 212 -----------GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIA------LEQAGP 254
                      G +AE+ +VP + +  +    PE +++  + LT  +A       E++G 
Sbjct: 107 PHRKGIGTQADGGFAEYVLVPEESLHEL----PENLSLEAAALTEPLAVAVHAVAERSGI 162

Query: 255 ASGKKVLVTAAAGGTGQFAVQV 276
             G  V+V    G  G  A QV
Sbjct: 163 RPGDTVVVF-GPGPIGLLAAQV 183

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 22/63 (34%), Positives = 32/63 (50%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           MQ     G I+N+GS +G  P      Y A+K G++  TRSL       +R+N +    V
Sbjct: 121 MQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLV 180

Query: 61  QTE 63
           +TE
Sbjct: 181 RTE 183

Length = 252

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-GIRINVLCPEF 59
           M    + GV+I MGS            Y  +K G++   R L     K  +R +V+CP F
Sbjct: 130 MYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGF 189

Query: 60  VQT 62
           V+T
Sbjct: 190 VRT 192

Length = 262

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQT 62
           K  G IIN+ S+       +   Y+ASKGG+V  T +L       IR+N + P ++ T
Sbjct: 123 KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 2   QAAKKP---GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKG-----IRIN 53
            A K P   G I+N  S AGL       IY+ SK  VV  T +L  Y+        +  +
Sbjct: 132 AAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL--YQDLSLVTDQVGAS 189

Query: 54  VLCPEFVQT 62
           VLCP FV T
Sbjct: 190 VLCPYFVPT 198

Length = 287

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLC 56
           +   +  G I+N+ S  G+ P     IYS +K  V+  T++      P+   GIR+N L 
Sbjct: 131 LMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPF---GIRVNALL 187

Query: 57  PEFVQT 62
           P    T
Sbjct: 188 PGLTDT 193

Length = 252

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 212 GSYAEFTMVPSK-HILPVARPDPEVVAMLT--SGLTASIALEQAGPASGKKVLVTAAAGG 268
           G YAE   +P    I+ V    P+ VA     +  T   AL++AGP      +V   AG 
Sbjct: 129 GGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGP 188

Query: 269 TGQFAV 274
            G +AV
Sbjct: 189 LGLYAV 194

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEF 59
           M AA + G ++N+ S+AGL  +     YSASK G+   +  L     R GI ++V+ P  
Sbjct: 124 MVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGA 183

Query: 60  VQTEM 64
           V+T +
Sbjct: 184 VKTPL 188

Length = 272

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEF 59
            ++ G I+ +GS+A   P      Y ASK  +    +     L PY   G+R NV+ P  
Sbjct: 124 RQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPY---GVRCNVVSPGS 180

Query: 60  VQTEM 64
             T+M
Sbjct: 181 TDTDM 185

Length = 252

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           G I+N+ S +          Y +SK  V   TR+L      KGIR+N + P  V+T+
Sbjct: 129 GAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPGAVKTD 185

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFT----RSLTPYKRKGIRINVLCPEFVQTE 63
           G I+N  S AGL        Y A+K G+   T    R+L  Y   G+R N +CP   +T 
Sbjct: 148 GRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRY---GVRANAICPR-ARTA 203

Query: 64  MGLKVASKFIDLMGG 78
           M   V     D+  G
Sbjct: 204 MTADVFGDAPDVEAG 218

Length = 306

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGL 66
           G I+N+     L P   D  Y+A K G+   T  L    +R GI +N L P         
Sbjct: 144 GHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRRHGIAVNSLWPSTAIETPA- 202

Query: 67  KVASKFIDLMGGFVP 81
                  +L GG  P
Sbjct: 203 -----ATELSGGSDP 212

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M  AKK G I+++ S AG+        Y+ASK  V+  TRS  T     GIR+N + P  
Sbjct: 127 MIPAKK-GSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVSPYG 185

Query: 60  VQTEMGLKVA 69
           V T +     
Sbjct: 186 VATPLLTAGF 195

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.97
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.96
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	99.96
PLN02740	381	Alcohol dehydrogenase-like	99.94
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.94
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.94
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.94
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.94
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.94
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.94
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.94
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.93
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.93
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.93
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.93
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.93
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.93
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.93
PLN02827	378	Alcohol dehydrogenase-like	99.93
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.92
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.92
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.92
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.92
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.92
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.92
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.91
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.91
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.91
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.91
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.91
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.91
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.91
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.91
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.9
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.9
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.9
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.89
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.89
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.89
PRK10083	339	putative oxidoreductase; Provisional	99.89
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.89
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.89
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.89
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.89
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.89
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.89
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.89
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.88
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.88
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.88
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.88
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.88
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.88
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.88
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.88
PTZ00354	334	alcohol dehydrogenase; Provisional	99.88
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.88
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.87
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.87
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.87
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.87
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.87
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.87
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.87
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.87
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.87
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.87
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.87
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.87
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.87
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.87
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.87
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.87
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.86
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.86
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.86
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.86
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.86
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.86
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.86
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.86
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.86
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.86
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.86
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.85
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.85
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.85
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.85
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.85
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.85
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.85
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.85
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.85
PLN02702	364	L-idonate 5-dehydrogenase	99.85
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.85
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.85
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.85
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.84
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.84
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.84
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.84
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.84
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.84
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.84
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.84
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.84
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.83
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.83
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.83
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.83
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.83
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.83
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.82
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.82
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.82
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.82
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.82
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.81
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.8
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.79
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.78
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.78
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.77
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.77
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08339	263	short chain dehydrogenase; Provisional	99.76
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.75
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.74
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.72
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.72
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.72
PRK05867	253	short chain dehydrogenase; Provisional	99.72
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.71
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK07063	260	short chain dehydrogenase; Provisional	99.69
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.69
KOG0725	270	consensus Reductases with broad range of substrate	99.68
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.68
PRK06114	254	short chain dehydrogenase; Provisional	99.68
PRK07062	265	short chain dehydrogenase; Provisional	99.67
PRK12747	252	short chain dehydrogenase; Provisional	99.67
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK08589	272	short chain dehydrogenase; Validated	99.65
PRK07791	286	short chain dehydrogenase; Provisional	99.65
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.65
PRK08265	261	short chain dehydrogenase; Provisional	99.65
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.64
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.64
PRK07831	262	short chain dehydrogenase; Provisional	99.64
PRK06940	275	short chain dehydrogenase; Provisional	99.64
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.64
PRK07478	254	short chain dehydrogenase; Provisional	99.64
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.63
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.63
PRK08643	256	acetoin reductase; Validated	99.63
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.63
PRK06125	259	short chain dehydrogenase; Provisional	99.62
PRK07985	294	oxidoreductase; Provisional	99.62
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.62
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.61
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.61
PRK08303	305	short chain dehydrogenase; Provisional	99.61
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.61
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.61
PRK05884	223	short chain dehydrogenase; Provisional	99.6
PRK12743	256	oxidoreductase; Provisional	99.6
PRK06398	258	aldose dehydrogenase; Validated	99.6
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.6
PRK06484	520	short chain dehydrogenase; Validated	99.59
PRK07856	252	short chain dehydrogenase; Provisional	99.59
PRK06523	260	short chain dehydrogenase; Provisional	99.59
PRK12742	237	oxidoreductase; Provisional	99.58
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.58
PRK06172	253	short chain dehydrogenase; Provisional	99.58
PRK07035	252	short chain dehydrogenase; Provisional	99.58
PRK06841	255	short chain dehydrogenase; Provisional	99.58
PRK06128	300	oxidoreductase; Provisional	99.57
PRK07677	252	short chain dehydrogenase; Provisional	99.57
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.56
PRK05599	246	hypothetical protein; Provisional	99.55
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK07067	257	sorbitol dehydrogenase; Provisional	99.54
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.53
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.53
PRK09242	257	tropinone reductase; Provisional	99.52
PRK06483	236	dihydromonapterin reductase; Provisional	99.52
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.52
PLN02253	280	xanthoxin dehydrogenase	99.51
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.51
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.51
PRK08226	263	short chain dehydrogenase; Provisional	99.51
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.5
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.5
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.49
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.49
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.49
PRK06949	258	short chain dehydrogenase; Provisional	99.49
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.48
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.48
PRK06484	520	short chain dehydrogenase; Validated	99.47
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.46
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.45
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.45
PRK08278	273	short chain dehydrogenase; Provisional	99.45
PRK07069	251	short chain dehydrogenase; Validated	99.44
PRK06701	290	short chain dehydrogenase; Provisional	99.44
PRK08628	258	short chain dehydrogenase; Provisional	99.43
PRK12937	245	short chain dehydrogenase; Provisional	99.43
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.43
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.42
PRK08862	227	short chain dehydrogenase; Provisional	99.42
PRK05872	296	short chain dehydrogenase; Provisional	99.42
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.42
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.42
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.41
PRK08703	239	short chain dehydrogenase; Provisional	99.41
PRK07576	264	short chain dehydrogenase; Provisional	99.41
PRK07814	263	short chain dehydrogenase; Provisional	99.4
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.4
PRK05717	255	oxidoreductase; Validated	99.4
PRK06198	260	short chain dehydrogenase; Provisional	99.4
PLN02780	320	ketoreductase/ oxidoreductase	99.39
PRK07060	245	short chain dehydrogenase; Provisional	99.39
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.39
PRK09186	256	flagellin modification protein A; Provisional	99.39
PRK07578	199	short chain dehydrogenase; Provisional	99.38
PRK06139	330	short chain dehydrogenase; Provisional	99.38
PRK06123	248	short chain dehydrogenase; Provisional	99.38
PRK12939	250	short chain dehydrogenase; Provisional	99.37
PRK06057	255	short chain dehydrogenase; Provisional	99.37
PRK12744	257	short chain dehydrogenase; Provisional	99.37
PRK06924	251	short chain dehydrogenase; Provisional	99.37
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.37
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.36
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.36
PRK05993	277	short chain dehydrogenase; Provisional	99.36
PRK05855	582	short chain dehydrogenase; Validated	99.36
PRK07577	234	short chain dehydrogenase; Provisional	99.36
PRK06500	249	short chain dehydrogenase; Provisional	99.35
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.34
PRK05875	276	short chain dehydrogenase; Provisional	99.34
PRK07832	272	short chain dehydrogenase; Provisional	99.33
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.33
PRK07890	258	short chain dehydrogenase; Provisional	99.33
PRK07041	230	short chain dehydrogenase; Provisional	99.33
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.32
PRK05876	275	short chain dehydrogenase; Provisional	99.32
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.32
PRK07904	253	short chain dehydrogenase; Provisional	99.32
PRK06182	273	short chain dehydrogenase; Validated	99.32
PLN00015	308	protochlorophyllide reductase	99.32
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.31
PRK07825	273	short chain dehydrogenase; Provisional	99.3
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.3
PRK12827	249	short chain dehydrogenase; Provisional	99.29
PRK07109	334	short chain dehydrogenase; Provisional	99.29
PRK06138	252	short chain dehydrogenase; Provisional	99.27
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.27
PRK07454	241	short chain dehydrogenase; Provisional	99.26
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.24
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.23
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.23
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.23
PRK06179	270	short chain dehydrogenase; Provisional	99.22
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.22
PRK07074	257	short chain dehydrogenase; Provisional	99.22
PRK12746	254	short chain dehydrogenase; Provisional	99.22
PRK09072	263	short chain dehydrogenase; Provisional	99.21
PRK08263	275	short chain dehydrogenase; Provisional	99.21
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.21
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.21
PRK07024	257	short chain dehydrogenase; Provisional	99.2
PRK06180	277	short chain dehydrogenase; Provisional	99.19
PRK09134	258	short chain dehydrogenase; Provisional	99.19
PRK05866	293	short chain dehydrogenase; Provisional	99.18
PRK10538	248	malonic semialdehyde reductase; Provisional	99.18
PRK08267	260	short chain dehydrogenase; Provisional	99.18
PRK08324	681	short chain dehydrogenase; Validated	99.18
PRK07806	248	short chain dehydrogenase; Provisional	99.17
PRK06196	315	oxidoreductase; Provisional	99.17
PRK05650	270	short chain dehydrogenase; Provisional	99.17
COG1028	251	FabG Dehydrogenases with different specificities (	99.17
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.16
PRK06914	280	short chain dehydrogenase; Provisional	99.14
PRK07102	243	short chain dehydrogenase; Provisional	99.14
PRK07023	243	short chain dehydrogenase; Provisional	99.14
PRK05693	274	short chain dehydrogenase; Provisional	99.13
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.12
PRK07774	250	short chain dehydrogenase; Provisional	99.11
PRK07775	274	short chain dehydrogenase; Provisional	99.11
PRK06101	240	short chain dehydrogenase; Provisional	99.11
PRK12828	239	short chain dehydrogenase; Provisional	99.1
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.09
PRK12829	264	short chain dehydrogenase; Provisional	99.09
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.09
PRK07201	657	short chain dehydrogenase; Provisional	99.09
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.08
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.08
PRK06181	263	short chain dehydrogenase; Provisional	99.06
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.06
PRK08177	225	short chain dehydrogenase; Provisional	99.05
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.05
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.03
PRK08251	248	short chain dehydrogenase; Provisional	99.03
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.02
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.0
PRK06194	287	hypothetical protein; Provisional	98.98
PRK06197	306	short chain dehydrogenase; Provisional	98.95
PRK08017	256	oxidoreductase; Provisional	98.95
PRK09291	257	short chain dehydrogenase; Provisional	98.92
PRK07326	237	short chain dehydrogenase; Provisional	98.89
PRK06482	276	short chain dehydrogenase; Provisional	98.88
PRK06953	222	short chain dehydrogenase; Provisional	98.84
PRK08264	238	short chain dehydrogenase; Validated	98.81
PRK09135	249	pteridine reductase; Provisional	98.81
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.81
PRK08219	227	short chain dehydrogenase; Provisional	98.79
PRK05854	313	short chain dehydrogenase; Provisional	98.79
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.76
PRK12367	245	short chain dehydrogenase; Provisional	98.74
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.69
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.14
PLN03209	576	translocon at the inner envelope of chloroplast su	98.08
KOG1208	314	consensus Dehydrogenases with different specificit	98.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.75
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.6
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.49
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.35
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.49
PLN02583	297	cinnamoyl-CoA reductase	95.43
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.11
TIGR01746	367	Thioester-redct thioester reductase domain. It has	93.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.67
PTZ00414	100	10 kDa heat shock protein; Provisional	93.62
PRK14533	91	groES co-chaperonin GroES; Provisional	93.09
PRK00364	95	groES co-chaperonin GroES; Reviewed	92.94
PLN02650	351	dihydroflavonol-4-reductase	92.78
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	91.6
PLN02653	340	GDP-mannose 4,6-dehydratase	91.57
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	91.51
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	91.05
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	91.0
PLN00198	338	anthocyanidin reductase; Provisional	89.43
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	89.3
PLN02896	353	cinnamyl-alcohol dehydrogenase	89.07
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	88.92
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	88.64
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	88.59
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	88.15
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	87.96
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	87.62
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	87.57
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	87.55
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	86.1
PLN02686	367	cinnamoyl-CoA reductase	84.97
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	84.73
PLN02214	342	cinnamoyl-CoA reductase	83.94
PF00166	93	Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR0208	83.62
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	83.16
COG0234	96	GroS Co-chaperonin GroES (HSP10) [Posttranslationa	82.97
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	82.92
KOG1641	104	consensus Mitochondrial chaperonin [Posttranslatio	82.56
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	82.36
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	81.22
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	80.97
PF10686	71	DUF2493: Protein of unknown function (DUF2493); In	80.53
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	80.35
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	80.13

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=255.75  Aligned_cols=153  Identities=27%  Similarity=0.384  Sum_probs=137.1

Q ss_pred             ccCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          127 SSGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      ++++........|   .+++.|.|+++||+|+|++ ++|.+|++.+.|.+.. ..+|+|+|||++|+|+++|++|++||+
T Consensus         3 ~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~-~~~P~ipGHEivG~V~~vG~~V~~~k~   81 (339)
T COG1064           3 TMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV-PKLPLIPGHEIVGTVVEVGEGVTGLKV   81 (339)
T ss_pred             ceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC-CCCCccCCcceEEEEEEecCCCccCCC
Confidence            3455555555553   5677899999999999999 9999999999998764 359999999999999999999999999


Q ss_pred             CCeeEE-cc----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH
Q 023465          203 GTPAAI-MT----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ  251 (282)
Q Consensus       203 Gd~V~~-~~----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~  251 (282)
                      ||||.+ +.                            +|+||||+++|+++++++|+  ++.++|.++|++.|.|++|++
T Consensus        82 GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~  161 (339)
T COG1064          82 GDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK  161 (339)
T ss_pred             CCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhh
Confidence            999998 31                            29999999999999999999  799999999999999999999


Q ss_pred             hCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          252 AGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       252 ~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      .+++||++|+|.|+ ||+|++++|+||++.
T Consensus       162 ~~~~pG~~V~I~G~-GGlGh~avQ~Aka~g  190 (339)
T COG1064         162 ANVKPGKWVAVVGA-GGLGHMAVQYAKAMG  190 (339)
T ss_pred             cCCCCCCEEEEECC-cHHHHHHHHHHHHcC
Confidence            99999999999999 899999999999864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.8e-33  Score=247.22  Aligned_cols=145  Identities=33%  Similarity=0.424  Sum_probs=133.7

Q ss_pred             CCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc----cC
Q 023465          137 QVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM----TF  211 (282)
Q Consensus       137 ~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----~~  211 (282)
                      ....++|.|.|++|||||||++ ++|+.|.+...|......++|+++|.|++|+|+++|++|++|++||||+..    ..
T Consensus        15 l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~   94 (326)
T COG0604          15 LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRD   94 (326)
T ss_pred             eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCC
Confidence            3456778899999999999999 999999999888644455689999999999999999999999999999998    47


Q ss_pred             CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          212 GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       212 G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      |+||||+++|++.++++|+  +++++|+++++++|||++| ...++++|++|||+||+|+||++++||||++.
T Consensus        95 G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G  167 (326)
T COG0604          95 GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALG  167 (326)
T ss_pred             CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence            9999999999999999999  8999999999999999999 55788999999999999999999999999875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.7e-31  Score=221.68  Aligned_cols=140  Identities=24%  Similarity=0.383  Sum_probs=130.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .++++|+|+++||+|||++ ++|.+|.+.+.+.+.. .++|.|+|||++|+|+++|++|++||+||||-+-.        
T Consensus        27 ~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~C  105 (360)
T KOG0023|consen   27 FSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSC  105 (360)
T ss_pred             eEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCc
Confidence            6777899999999999999 9999999999998876 89999999999999999999999999999997531        


Q ss_pred             ----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEE
Q 023465          211 ----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKV  260 (282)
Q Consensus       211 ----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~v  260 (282)
                                                  .|+||||+++++..++++|+  +.+.+|.++|++.|+|.+|++.++.||++|
T Consensus       106 E~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~pG~~v  185 (360)
T KOG0023|consen  106 EYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGLGPGKWV  185 (360)
T ss_pred             cccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCCCCCcEE
Confidence                                        17799999999999999999  788999999999999999999999999999


Q ss_pred             EEeCCCchHHHHHHHHHHHhh
Q 023465          261 LVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       261 li~ga~g~vG~~a~q~a~~~~  281 (282)
                      .|.|+ ||+|.+++|+||+|.
T Consensus       186 gI~Gl-GGLGh~aVq~AKAMG  205 (360)
T KOG0023|consen  186 GIVGL-GGLGHMAVQYAKAMG  205 (360)
T ss_pred             EEecC-cccchHHHHHHHHhC
Confidence            99999 779999999999984

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=5e-30  Score=217.82  Aligned_cols=140  Identities=27%  Similarity=0.334  Sum_probs=126.5

Q ss_pred             cccCCCC-CCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          141 NLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       141 ~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ++|.|++ .|+||+|++++ +||.+|.+++..+.  .+..+.|+++|||.+|+|+|+|+.|+++|+||||++.+      
T Consensus        20 ~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~   99 (354)
T KOG0024|consen   20 QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRD   99 (354)
T ss_pred             eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCcccc
Confidence            5555665 89999999999 99999999998663  23346899999999999999999999999999999863      


Q ss_pred             -----------------------CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          211 -----------------------FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       211 -----------------------~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                             +|+++||++.+++.|+|||| -+.+.++|.+++++++||.+++++++|++|||+|| 
T Consensus       100 cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GA-  178 (354)
T KOG0024|consen  100 CDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHACRRAGVKKGSKVLVLGA-  178 (354)
T ss_pred             chhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhhhhhcCcccCCeEEEECC-
Confidence                                   19999999999999999999 57788889999999999999999999999999999 


Q ss_pred             chHHHHHHHHHHHhh
Q 023465          267 GGTGQFAVQVYFQIQ  281 (282)
Q Consensus       267 g~vG~~a~q~a~~~~  281 (282)
                      |++|+.+...||++.
T Consensus       179 GPIGl~t~l~Aka~G  193 (354)
T KOG0024|consen  179 GPIGLLTGLVAKAMG  193 (354)
T ss_pred             cHHHHHHHHHHHHcC
Confidence            999999999999874

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.96  E-value=1e-28  Score=202.75  Aligned_cols=143  Identities=34%  Similarity=0.436  Sum_probs=131.0

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-cCCccc
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-TFGSYA  215 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~G~~a  215 (282)
                      +..+.|.|+|.|+|++||.++ ++|+.|.....|-|. +.+.|++||.|.+|+|+++|++|+++++||||+.. ++|.|+
T Consensus        24 k~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~ya  102 (336)
T KOG1197|consen   24 KLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYA  102 (336)
T ss_pred             EEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCccccccccEEEEeccchhhh
Confidence            345667789999999999999 999999998888875 67899999999999999999999999999999876 579999


Q ss_pred             cEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          216 EFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       216 e~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      |+..+|...++++|+  ++.++|+++..++|||.-+++ .+++||++||||.|+||||++++|++|++.
T Consensus       103 ee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~  171 (336)
T KOG1197|consen  103 EEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVG  171 (336)
T ss_pred             eeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcC
Confidence            999999999999999  799999999999999999954 567999999999999999999999999753

>PLN02740 Alcohol dehydrogenase-like

Probab=99.94  E-value=5.3e-27  Score=213.20  Aligned_cols=140  Identities=19%  Similarity=0.253  Sum_probs=125.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .+++.|.|+++||+|||++ ++|.+|.+.+.|.+.....+|.++|||++|+|+++|++|++|++||||++..        
T Consensus        26 ~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~  105 (381)
T PLN02740         26 EEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCR  105 (381)
T ss_pred             EEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCCh
Confidence            4677888999999999999 9999999988776433346799999999999999999999999999998642        


Q ss_pred             --------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHH
Q 023465          211 --------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLT  244 (282)
Q Consensus       211 --------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~t  244 (282)
                                                                  .|+|+||+++|.+.++++|+  ++++++.+.+++.|
T Consensus       106 ~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  185 (381)
T PLN02740        106 YCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVST  185 (381)
T ss_pred             hhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchh
Confidence                                                        48999999999999999999  67788888899999


Q ss_pred             HHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          245 ASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       245 a~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ||+++ +.+++++|++|||+|+ |++|++++|+||++
T Consensus       186 a~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~  221 (381)
T PLN02740        186 GVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARAR  221 (381)
T ss_pred             hHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHC
Confidence            99987 6688899999999997 99999999999975

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.94  E-value=9.8e-27  Score=210.51  Aligned_cols=140  Identities=26%  Similarity=0.345  Sum_probs=124.5

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .++|.|.|+++||+|||++ ++|.+|.+...+.+. ...+|.++|||++|+|+++|++|++|++||||++..        
T Consensus        17 ~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~-~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~   95 (368)
T TIGR02818        17 EEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADP-EGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECK   95 (368)
T ss_pred             EEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCC-CCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCCh
Confidence            4667788999999999999 999999988877543 235789999999999999999999999999998642        


Q ss_pred             -----------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          211 -----------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       211 -----------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                               .|+|+||+++|++.++++|+  ++++++.+.+++.|||+
T Consensus        96 ~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~  175 (368)
T TIGR02818        96 FCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIG  175 (368)
T ss_pred             hhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHH
Confidence                                                     26999999999999999999  78888888999999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++ +++.+++|++|||+|+ |++|++++|+||++.
T Consensus       176 a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G  209 (368)
T TIGR02818       176 AVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAK  209 (368)
T ss_pred             HHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            98 6678899999999986 999999999999763

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.94  E-value=1.6e-26  Score=206.63  Aligned_cols=141  Identities=26%  Similarity=0.333  Sum_probs=125.0

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|.|+++||+||+.+ ++|++|.+...+.+..+..+|.++|||++|+|+++|++|++|++||||+..+       
T Consensus        14 ~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c   93 (339)
T cd08239          14 LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGAC   93 (339)
T ss_pred             EEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCC
Confidence            35677788999999999999 9999998877655322234589999999999999999999999999998753       


Q ss_pred             ----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          211 ----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                            .|+|+||+++|.+.++++|+  ++++++.+++++.|||++++++++++|++|||+|+ 
T Consensus        94 ~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~-  172 (339)
T cd08239          94 RNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGA-  172 (339)
T ss_pred             hhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECC-
Confidence                                  58999999999999999999  67888888999999999998888999999999987 


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      |++|++++|+||++
T Consensus       173 G~vG~~~~~~ak~~  186 (339)
T cd08239         173 GPVGLGALMLARAL  186 (339)
T ss_pred             CHHHHHHHHHHHHc
Confidence            99999999999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.94  E-value=1.7e-26  Score=208.29  Aligned_cols=140  Identities=21%  Similarity=0.332  Sum_probs=122.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..+++.|.|+++||+|||++ ++|.+|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++.        
T Consensus        27 ~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~-~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~  105 (360)
T PLN02586         27 PFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG-FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKS  105 (360)
T ss_pred             EEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC-CCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCC
Confidence            34566788899999999999 999999988776543 23578999999999999999999999999999742        


Q ss_pred             ----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHh-CCCCCC
Q 023465          210 ----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQA-GPASGK  258 (282)
Q Consensus       210 ----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~-~~~~g~  258 (282)
                                                  .+|+|+||+++|++.++++|+  ++++++++.+.+.|+|+++.+. .+++|+
T Consensus       106 C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~  185 (360)
T PLN02586        106 CESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGK  185 (360)
T ss_pred             CccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCC
Confidence                                        148999999999999999999  7888999999999999999654 458999


Q ss_pred             EEEEeCCCchHHHHHHHHHHHh
Q 023465          259 KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       259 ~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|||.|+ |++|++++|+||++
T Consensus       186 ~VlV~G~-G~vG~~avq~Ak~~  206 (360)
T PLN02586        186 HLGVAGL-GGLGHVAVKIGKAF  206 (360)
T ss_pred             EEEEECC-CHHHHHHHHHHHHC
Confidence            9999887 99999999999976

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.94  E-value=2.8e-26  Score=204.54  Aligned_cols=141  Identities=25%  Similarity=0.309  Sum_probs=125.3

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ...++|.|.|+++||+|||.+ ++|.+|.+...|.++. ..+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        16 ~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~   94 (329)
T TIGR02822        16 RFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV-HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCG   94 (329)
T ss_pred             eEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC-CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCC
Confidence            345677889999999999999 9999999888775432 2357899999999999999999999999999752       


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                            ..|+|+||+.+|++.++++|+  ++.+++++++++.|||++++++++++|++|||+|+
T Consensus        95 ~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~  174 (329)
T TIGR02822        95 VCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGF  174 (329)
T ss_pred             CChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcC
Confidence                                  148999999999999999999  67888899999999999998888899999999998


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+||++
T Consensus       175 -g~iG~~a~~~a~~~  188 (329)
T TIGR02822       175 -GGSAHLTAQVALAQ  188 (329)
T ss_pred             -CHHHHHHHHHHHHC
Confidence             99999999999975

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.94  E-value=3.3e-26  Score=207.32  Aligned_cols=139  Identities=23%  Similarity=0.338  Sum_probs=123.7

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|.|+++||+|||.+ ++|.+|.+.+.+.+  +..+|.++|||++|+|+++|++|++|++||||++..       
T Consensus        23 ~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c  100 (371)
T cd08281          23 IEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR--PRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHC  100 (371)
T ss_pred             EEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC--CCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCC
Confidence            35677888999999999999 99999999887753  345789999999999999999999999999998631       


Q ss_pred             ------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTAS  246 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~  246 (282)
                                                                .|+|+||+++|++.++++|+  ++++++.+.++++|||
T Consensus       101 ~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~  180 (371)
T cd08281         101 RPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV  180 (371)
T ss_pred             ccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHH
Confidence                                                      26999999999999999999  6788888889999999


Q ss_pred             HHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++ +++++++|++|||+|+ |++|++++|+||++
T Consensus       181 ~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~  214 (371)
T cd08281         181 GAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAA  214 (371)
T ss_pred             HHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            997 6788899999999996 99999999999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.94  E-value=6.2e-27  Score=200.66  Aligned_cols=149  Identities=23%  Similarity=0.316  Sum_probs=129.1

Q ss_pred             CCccccCCCCCc---cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCC
Q 023465          129 GSMKRSSSQVPL---NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT  204 (282)
Q Consensus       129 ~~~~~~~~~~~~---~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd  204 (282)
                      ++++.....+|.   +++++.|+++|||||+.+ ++|.+|....+|..+  ..+|.++|||++|+|++||++|+++|+||
T Consensus         4 ~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p--~~~P~vLGHEgAGiVe~VG~gVt~vkpGD   81 (366)
T COG1062           4 RAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP--EGFPAVLGHEGAGIVEAVGEGVTSVKPGD   81 (366)
T ss_pred             eEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC--CCCceecccccccEEEEecCCccccCCCC
Confidence            344555556664   455889999999999999 999999999888754  35999999999999999999999999999


Q ss_pred             eeEEccC-------------------------------------------------CccccEEeecCCCeeeCCC--ChH
Q 023465          205 PAAIMTF-------------------------------------------------GSYAEFTMVPSKHILPVAR--PDP  233 (282)
Q Consensus       205 ~V~~~~~-------------------------------------------------G~~ae~~~v~~~~~~~~p~--~~~  233 (282)
                      +|+....                                                 ++|+||.++++..++++++  +++
T Consensus        82 hVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~  161 (366)
T COG1062          82 HVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLE  161 (366)
T ss_pred             EEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCcc
Confidence            9986511                                                 5999999999999999977  677


Q ss_pred             HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          234 EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       234 ~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .++-+.|...|.+.+. +.+++++|++|.|+|. |+||++++|-|+..
T Consensus       162 ~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~a  208 (366)
T COG1062         162 KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAA  208 (366)
T ss_pred             ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHc
Confidence            7777889999999987 7888999999999999 99999999999864

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.94  E-value=2.9e-26  Score=205.43  Aligned_cols=138  Identities=17%  Similarity=0.220  Sum_probs=115.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCC---CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI---GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      .++|.| ++++||||||++ ++|.+|.+.+.|.+..   ...+|.++|||++|+|+++|.+  +|++||||++.+     
T Consensus        17 ~~~~~P-~~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~   93 (341)
T cd08237          17 TYEEEN-LREDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE   93 (341)
T ss_pred             eecCCC-CCCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch
Confidence            456667 489999999999 9999999988875422   1357999999999999998764  799999998742     


Q ss_pred             --------------------CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHH---hCCCCCCEEEEeCCC
Q 023465          211 --------------------FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQ---AGPASGKKVLVTAAA  266 (282)
Q Consensus       211 --------------------~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~---~~~~~g~~vli~ga~  266 (282)
                                          .|+|+||+++|++.++++|+ -+.+.|++.++++++|+++++   +.+++||+|||.|+ 
T Consensus        94 ~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-  172 (341)
T cd08237          94 KDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-  172 (341)
T ss_pred             hcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-
Confidence                                38899999999999999999 233456688899999999853   34689999999997 


Q ss_pred             chHHHHHHHHHHHhh
Q 023465          267 GGTGQFAVQVYFQIQ  281 (282)
Q Consensus       267 g~vG~~a~q~a~~~~  281 (282)
                      |++|++++|+|++++
T Consensus       173 G~vGl~~~~~a~~~~  187 (341)
T cd08237         173 GNLGYITALLLKQIY  187 (341)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999998743

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.93  E-value=5.2e-26  Score=205.01  Aligned_cols=138  Identities=25%  Similarity=0.288  Sum_probs=122.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .+++.|.|+++||+|||.+ ++|.+|.+...+..  ...+|.++|||++|+|+++|++|++|++||||++.         
T Consensus        17 ~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~   94 (358)
T TIGR03451        17 ETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGI--NDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCR   94 (358)
T ss_pred             EEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCc--cccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCCh
Confidence            5677888999999999999 99999998877653  23578999999999999999999999999999862         


Q ss_pred             --------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCC
Q 023465          210 --------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGP  254 (282)
Q Consensus       210 --------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~  254 (282)
                                                      ..|+|+||+.+|++.++++|+  ++++++.+.+++.|+|+++ +...+
T Consensus        95 ~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~  174 (358)
T TIGR03451        95 ACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV  174 (358)
T ss_pred             HHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCC
Confidence                                            248999999999999999999  6778888888999999887 56778


Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          255 ASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       255 ~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|++|||+|+ |++|++++|+||++
T Consensus       175 ~~g~~VlV~G~-g~vG~~a~~~ak~~  199 (358)
T TIGR03451       175 KRGDSVAVIGC-GGVGDAAIAGAALA  199 (358)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            99999999986 99999999999975

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.93  E-value=1e-25  Score=203.97  Aligned_cols=139  Identities=19%  Similarity=0.232  Sum_probs=123.1

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .+++.|.|+++||+|||.+ ++|.+|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++..        
T Consensus        18 ~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~   96 (369)
T cd08301          18 EEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECR   96 (369)
T ss_pred             EEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCc
Confidence            4667788999999999999 999999888776532 346789999999999999999999999999998741        


Q ss_pred             ------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTAS  246 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~  246 (282)
                                                                .|+|+||+++|...++++|+  ++++++.+++++.|+|
T Consensus        97 ~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~  176 (369)
T cd08301          97 HCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGL  176 (369)
T ss_pred             hhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHH
Confidence                                                      27899999999999999999  6778888889999999


Q ss_pred             HHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++ +..++++|++|||+|+ |++|++++|+||++
T Consensus       177 ~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~  210 (369)
T cd08301         177 GAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIR  210 (369)
T ss_pred             HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            987 5678899999999986 99999999999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.93  E-value=7.5e-26  Score=199.98  Aligned_cols=137  Identities=16%  Similarity=0.220  Sum_probs=114.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-ccc-ccccccccCCCCCC--CCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVN-FSSGRYFSDGNDIG--SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~-~~d~~~~~~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      .+++.|.|+++||||||++ ++| .+|.+++.|.+...  ..+|+++|||++|+|+++|+++ +|++||||+...     
T Consensus        16 ~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~   94 (308)
T TIGR01202        16 REVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCYE   94 (308)
T ss_pred             EEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEeCccccc
Confidence            4567788999999999999 997 58887777654321  3579999999999999999998 699999998632     


Q ss_pred             -----CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          211 -----FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 -----~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                           .|+|+||+++|++.++++|+ .+.++ ++..++.|||+++++.. .++++|||+|+ |++|++++|+||++
T Consensus        95 ~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~~~~-~~~~~vlV~G~-G~vG~~a~q~ak~~  167 (308)
T TIGR01202        95 DVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVAGAE-VKVLPDLIVGH-GTLGRLLARLTKAA  167 (308)
T ss_pred             cccccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHHhcc-cCCCcEEEECC-CHHHHHHHHHHHHc
Confidence                 59999999999999999999 33344 44567899999997653 46999999986 99999999999975

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.93  E-value=9.2e-26  Score=204.15  Aligned_cols=139  Identities=22%  Similarity=0.261  Sum_probs=123.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .++|.|.|+++||+|||++ ++|.+|.+...+.++ ...+|.++|||++|+|+++|+++++|++||||++..        
T Consensus        18 ~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~   96 (368)
T cd08300          18 EEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADP-EGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECK   96 (368)
T ss_pred             EEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCc-cCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCCh
Confidence            4667888999999999999 999999988776543 235799999999999999999999999999998641        


Q ss_pred             -----------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          211 -----------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       211 -----------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                               .|+|+||++++++.++++|+  ++++++.+.+++.|||+
T Consensus        97 ~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~  176 (368)
T cd08300          97 FCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYG  176 (368)
T ss_pred             hhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHH
Confidence                                                     26899999999999999999  67888888899999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +.+.+++|++|||+|+ |++|++++|+||++
T Consensus       177 a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~  209 (368)
T cd08300         177 AVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAA  209 (368)
T ss_pred             HHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            98 6678899999999986 99999999999975

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-25  Score=200.96  Aligned_cols=137  Identities=23%  Similarity=0.305  Sum_probs=116.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-ccccccccccc-CCCC-CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFS-DGND-IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~-~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .+++.| ++++||||||++ ++|++|.+.+. +.+. ....+|.++|||++|+|+++  +|++|++||||++.       
T Consensus        19 ~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~   95 (343)
T PRK09880         19 TEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGH   95 (343)
T ss_pred             EecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcC
Confidence            455556 588999999999 99999998764 3221 23467999999999999999  78999999999853       


Q ss_pred             --------------------------cCCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          210 --------------------------TFGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       210 --------------------------~~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                                                ..|+|+||+++|++.++++|+ .+.+.+++..+++|||+++++.+..+|++|||
T Consensus        96 c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~~al~~~~~~~g~~VlV  175 (343)
T PRK09880         96 CKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFV  175 (343)
T ss_pred             ChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHHHHHHhcCCCCCCEEEE
Confidence                                      249999999999999999999 34456678889999999998888889999999


Q ss_pred             eCCCchHHHHHHHHHHHh
Q 023465          263 TAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       263 ~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+ |++|++++|+||++
T Consensus       176 ~G~-G~vG~~aiqlak~~  192 (343)
T PRK09880        176 SGV-GPIGCLIVAAVKTL  192 (343)
T ss_pred             ECC-CHHHHHHHHHHHHc
Confidence            997 99999999999986

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.93  E-value=1.1e-25  Score=205.03  Aligned_cols=138  Identities=18%  Similarity=0.211  Sum_probs=117.7

Q ss_pred             ccccCCCCC-------CCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--
Q 023465          140 LNLNVQLPE-------SFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--  209 (282)
Q Consensus       140 ~~~~~p~~~-------~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--  209 (282)
                      .++|.|.|+       ++||||||++ ++|.+|.+++.+.+  ...+|.++|||++|+|+++|++|++|++||||++.  
T Consensus        17 ~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~--~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~   94 (393)
T TIGR02819        17 QDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT--TAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN   94 (393)
T ss_pred             EeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC--CCCCCccccceeEEEEEEEcCccccccCCCEEEEecc
Confidence            456666653       6899999999 99999999887653  23579999999999999999999999999999762  


Q ss_pred             ------------------------------------cCCccccEEeecCC--CeeeCCCC--h----HHHHHhhhHHHHH
Q 023465          210 ------------------------------------TFGSYAEFTMVPSK--HILPVARP--D----PEVVAMLTSGLTA  245 (282)
Q Consensus       210 ------------------------------------~~G~~ae~~~v~~~--~~~~~p~~--~----~~~a~l~~~~~ta  245 (282)
                                                          ..|+|+||+++|..  .++++|++  .    .+++++.+++.|+
T Consensus        95 ~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta  174 (393)
T TIGR02819        95 IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTG  174 (393)
T ss_pred             cCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHH
Confidence                                                14899999999964  69999982  2    3467788899999


Q ss_pred             HHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++++.++++|++|||.|+ |++|++++|+|+++
T Consensus       175 ~~a~~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~  208 (393)
T TIGR02819       175 YHGAVTAGVGPGSTVYIAGA-GPVGLAAAASAQLL  208 (393)
T ss_pred             HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            99998888899999999776 99999999999975

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.93  E-value=1.8e-25  Score=202.54  Aligned_cols=139  Identities=24%  Similarity=0.338  Sum_probs=121.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .+++.|.|+++||+|||.+ ++|.+|.+.+.|.+. ...+|.++|||++|+|+++|++|++|++||||.+..        
T Consensus        22 ~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~-~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C  100 (375)
T PLN02178         22 FHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG-FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSC  100 (375)
T ss_pred             EeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC-CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCC
Confidence            3566678899999999999 999999988876542 235689999999999999999999999999997421        


Q ss_pred             ----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCC--CCCC
Q 023465          211 ----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGP--ASGK  258 (282)
Q Consensus       211 ----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~--~~g~  258 (282)
                                                  .|+|+||+++|++.++++|+  ++++++++.+++.|+|+++.+...  ++|+
T Consensus       101 ~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~  180 (375)
T PLN02178        101 ESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK  180 (375)
T ss_pred             hhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCC
Confidence                                        48999999999999999999  778888899999999999966553  6899


Q ss_pred             EEEEeCCCchHHHHHHHHHHHh
Q 023465          259 KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       259 ~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+|.|+ |++|++++|+||++
T Consensus       181 ~VlV~G~-G~vG~~avq~Ak~~  201 (375)
T PLN02178        181 RLGVNGL-GGLGHIAVKIGKAF  201 (375)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHc
Confidence            9999997 99999999999976

>PLN02827 Alcohol dehydrogenase-like

Probab=99.93  E-value=4.4e-25  Score=200.34  Aligned_cols=137  Identities=19%  Similarity=0.217  Sum_probs=121.0

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|.|+++||+|||.+ ++|.+|.+.+.+.    ..+|.++|||++|+|+++|++|++|++||||++..       
T Consensus        27 ~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~----~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C  102 (378)
T PLN02827         27 MEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ----ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSC  102 (378)
T ss_pred             EEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC----CCCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCC
Confidence            35677888999999999999 9999998876553    14688999999999999999999999999998752       


Q ss_pred             ------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTAS  246 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~  246 (282)
                                                                .|+|+||+.+|++.++++|+  ++++++.+.+++.|+|
T Consensus       103 ~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~  182 (378)
T PLN02827        103 RHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGL  182 (378)
T ss_pred             hhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhH
Confidence                                                      27999999999999999999  6777888888899999


Q ss_pred             HHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++ +..++++|++|||+|+ |++|++++|+||++
T Consensus       183 ~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~  216 (378)
T PLN02827        183 GAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLR  216 (378)
T ss_pred             HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            987 5678899999999997 99999999999975

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.92  E-value=5.4e-25  Score=198.92  Aligned_cols=139  Identities=19%  Similarity=0.204  Sum_probs=124.3

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|.|.++++||+|||.+ ++|.+|.+...+...  ..+|.++|||++|+|+++|++|+++++||||++..       
T Consensus        17 ~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c   94 (365)
T cd08277          17 IEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGEC   94 (365)
T ss_pred             EEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCC
Confidence            35677888999999999999 999999988776532  46789999999999999999999999999998741       


Q ss_pred             -----------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          211 -----------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       211 -----------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                               .|+|+||+.++.+.++++|+  ++++++.+.+++.|||+
T Consensus        95 ~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~  174 (365)
T cd08277          95 SNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYG  174 (365)
T ss_pred             chhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHH
Confidence                                                     37999999999999999999  67888888999999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +.+.+++|++|||+|+ |++|++++|+||++
T Consensus       175 ~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~  207 (365)
T cd08277         175 AAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIA  207 (365)
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            87 6778899999999986 99999999999976

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.92  E-value=1.2e-24  Score=196.11  Aligned_cols=140  Identities=20%  Similarity=0.323  Sum_probs=122.7

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..+++.|+|+++||+|||.+ ++|..|.+...+.+. ...+|.++|||++|+|+++|++|++|++||+|++.        
T Consensus        24 ~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~  102 (357)
T PLN02514         24 PYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG-MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGE  102 (357)
T ss_pred             EEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC-cCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCC
Confidence            45667788999999999999 999999988776542 23568999999999999999999999999999741        


Q ss_pred             ----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCC-CCCC
Q 023465          210 ----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGP-ASGK  258 (282)
Q Consensus       210 ----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~-~~g~  258 (282)
                                                  ..|+|+||+++|.+.++++|+  ++++++++++++.|||+++.+... ++|+
T Consensus       103 C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  182 (357)
T PLN02514        103 CSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGL  182 (357)
T ss_pred             ChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCC
Confidence                                        148999999999999999999  788889999999999999966554 7999


Q ss_pred             EEEEeCCCchHHHHHHHHHHHh
Q 023465          259 KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       259 ~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+|+|+ |++|++++|+||++
T Consensus       183 ~vlV~G~-G~vG~~av~~Ak~~  203 (357)
T PLN02514        183 RGGILGL-GGVGHMGVKIAKAM  203 (357)
T ss_pred             eEEEEcc-cHHHHHHHHHHHHC
Confidence            9999976 99999999999976

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.92  E-value=8.6e-25  Score=195.86  Aligned_cols=141  Identities=16%  Similarity=0.138  Sum_probs=115.4

Q ss_pred             CccccCCCCC-CCcEEEEEEc-cccccccccccCC-C-CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCcc
Q 023465          139 PLNLNVQLPE-SFEKLLWIYG-QVNFSSGRYFSDG-N-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSY  214 (282)
Q Consensus       139 ~~~~~~p~~~-~~~vlv~v~~-~~~~~d~~~~~~~-~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~  214 (282)
                      ..+++.|+|. ++||||||++ ++|+.|....... . ....++|.++|||++|+|+++|++|++|++||||+... ++|
T Consensus        25 ~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~  103 (345)
T cd08293          25 VEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-WPW  103 (345)
T ss_pred             EEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-CCc
Confidence            3466778774 9999999999 9998874322111 0 11235688999999999999999999999999998764 789


Q ss_pred             ccEEeecCCCeeeCCCC--h----HHHHHhhhHHHHHHHHH-HHhCCCCC--CEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVARP--D----PEVVAMLTSGLTASIAL-EQAGPASG--KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~~--~----~~~a~l~~~~~ta~~~l-~~~~~~~g--~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +||+++|++.++++|+.  +    ..+++++.+++|||+++ +.+++++|  ++|||+|++|++|++++|+||++
T Consensus       104 ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~  178 (345)
T cd08293         104 QTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLL  178 (345)
T ss_pred             eeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence            99999999999999982  2    23567788999999999 56677776  99999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.92  E-value=1.2e-24  Score=181.96  Aligned_cols=140  Identities=21%  Similarity=0.283  Sum_probs=130.5

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCccccE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEF  217 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae~  217 (282)
                      .+++|.....||+||..+ .||++|.....|.|+..+++|.|-|.|++|+|+.+|+++.+|++||+|+...  .|+|++|
T Consensus        39 ~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~  118 (354)
T KOG0025|consen   39 NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTE  118 (354)
T ss_pred             cccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCCCccceee
Confidence            445777778889999999 9999999999999998899999999999999999999999999999999775  5999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .+.+++.++++++  +.+.||++..+.+|||.+| +...+++||+|.-.||+++||++.+|+||++
T Consensus       119 ~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~  184 (354)
T KOG0025|consen  119 AVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKAL  184 (354)
T ss_pred             EeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHh
Confidence            9999999999998  7899999999999999999 6678899999999999999999999999986

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.92  E-value=1.1e-24  Score=196.22  Aligned_cols=140  Identities=19%  Similarity=0.179  Sum_probs=116.3

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCC--CCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIG--SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      ..++|.|.|+++||||||++ ++|++|.+.+.|.+...  ..+|.++|||++|+|+++|++ ++|++||||+...     
T Consensus        15 ~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg   93 (355)
T cd08230          15 VVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPG   93 (355)
T ss_pred             EEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCC
Confidence            34677899999999999999 99999999887764221  246899999999999999999 9999999998631     


Q ss_pred             --------------------------CCccccEEeecCCCeeeCCCChHHHHHhhhHHHHHHHHHHH-------hCCCCC
Q 023465          211 --------------------------FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQ-------AGPASG  257 (282)
Q Consensus       211 --------------------------~G~~ae~~~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l~~-------~~~~~g  257 (282)
                                                +|+|+||+++|++.++++|+...+++++.+++.++++++..       .+.++|
T Consensus        94 ~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g  173 (355)
T cd08230          94 KCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNP  173 (355)
T ss_pred             cChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCCcceeecchHHHHHHHHHHHhhhhhhcccCCC
Confidence                                      38899999999999999999322667777788777666532       225789


Q ss_pred             CEEEEeCCCchHHHHHHHHHHHh
Q 023465          258 KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       258 ~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|||+|+ |++|++++|+||++
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~  195 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLR  195 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc
Confidence            99999997 99999999999986

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.92  E-value=2e-24  Score=191.56  Aligned_cols=141  Identities=23%  Similarity=0.344  Sum_probs=126.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~  217 (282)
                      .+++.|.+.++||+|||++ ++|..|.....+.+......|.++|||++|+|+++|++|++|++||+|++.. .|+|++|
T Consensus        19 ~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~   98 (324)
T cd08292          19 GEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEY   98 (324)
T ss_pred             eecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeE
Confidence            4566788899999999999 9999998877665432345688999999999999999999999999999986 7999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++...++++|+  ++.+++.++....|||++++...+++|++|||+|++|++|++++|+|+++
T Consensus        99 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~  163 (324)
T cd08292          99 FVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAAR  163 (324)
T ss_pred             EEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence            9999999999999  67888888888999999997788899999999999999999999999986

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=1.1e-24  Score=184.12  Aligned_cols=150  Identities=21%  Similarity=0.245  Sum_probs=130.1

Q ss_pred             CCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCC
Q 023465          129 GSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT  204 (282)
Q Consensus       129 ~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd  204 (282)
                      ++++.....+|   +++++++|+.+||+||+.+ ++|.+|.+.+.+.. ....+|.|+|||.+|+|+.+|++|+++++||
T Consensus         9 KAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHEaaGIVESvGegV~~vk~GD   87 (375)
T KOG0022|consen    9 KAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHEAAGIVESVGEGVTTVKPGD   87 (375)
T ss_pred             eEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC-ccccCceEecccceeEEEEecCCccccCCCC
Confidence            44455555555   4555888999999999999 99999999998875 5667899999999999999999999999999


Q ss_pred             eeEEccC--------------------------------------------------CccccEEeecCCCeeeCCC--Ch
Q 023465          205 PAAIMTF--------------------------------------------------GSYAEFTMVPSKHILPVAR--PD  232 (282)
Q Consensus       205 ~V~~~~~--------------------------------------------------G~~ae~~~v~~~~~~~~p~--~~  232 (282)
                      +|+....                                                  .+|+||.+++...+.++++  +.
T Consensus        88 ~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl  167 (375)
T KOG0022|consen   88 HVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPL  167 (375)
T ss_pred             EEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCCh
Confidence            9986410                                                  4999999999999999987  56


Q ss_pred             HHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          233 PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       233 ~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++-|.|...|.|.|. +.+.++||++|.|+|. |+||++++|-||+.
T Consensus       168 ~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~  215 (375)
T KOG0022|consen  168 EKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAA  215 (375)
T ss_pred             hheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhc
Confidence            66667789999999987 8899999999999999 99999999999975

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.91  E-value=4.4e-24  Score=190.43  Aligned_cols=140  Identities=25%  Similarity=0.309  Sum_probs=124.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~~  214 (282)
                      .++|.|.|+++||+|||++ ++|+.|.....+... ...+|.++|||++|+|+++|++|++|++||+|+...    .|+|
T Consensus        20 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~   98 (336)
T TIGR02817        20 IDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP-EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSN   98 (336)
T ss_pred             cccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC-CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcc
Confidence            4567788999999999999 999999877655432 235688999999999999999999999999999874    6999


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCC-----CCEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPAS-----GKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~-----g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +||++++++.++++|+  ++++++.++++..|||+++ +..++++     |++|||+|++|++|++++|+||++
T Consensus        99 ~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~  172 (336)
T TIGR02817        99 AEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQL  172 (336)
T ss_pred             cceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence            9999999999999999  7889999999999999999 6677776     999999999999999999999986

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.91  E-value=4e-24  Score=192.10  Aligned_cols=139  Identities=24%  Similarity=0.329  Sum_probs=121.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .++|.|.|+++||+|||.+ ++|.+|.+...+.+.....+|.++|||++|+|+++|++++.+ +||||++.         
T Consensus        14 ~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~   92 (349)
T TIGR03201        14 TRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECE   92 (349)
T ss_pred             EeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCCh
Confidence            4677788999999999999 999999887644322234568999999999999999999887 99999862         


Q ss_pred             -------------------cCCccccEEeecCCCeeeCCC--------ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          210 -------------------TFGSYAEFTMVPSKHILPVAR--------PDPEVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       210 -------------------~~G~~ae~~~v~~~~~~~~p~--------~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                                         ..|+|+||+++|++.++++|+        ++++++++.+++.|+|+++++..+++|++|+|
T Consensus        93 ~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV  172 (349)
T TIGR03201        93 LCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIV  172 (349)
T ss_pred             hhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEE
Confidence                               259999999999999999996        35677888899999999998888899999999


Q ss_pred             eCCCchHHHHHHHHHHHh
Q 023465          263 TAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       263 ~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+ |++|++++|+|+++
T Consensus       173 ~G~-G~vG~~a~~~a~~~  189 (349)
T TIGR03201       173 IGA-GGVGGYMVQTAKAM  189 (349)
T ss_pred             ECC-CHHHHHHHHHHHHc
Confidence            999 99999999999976

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.91  E-value=4.7e-24  Score=189.64  Aligned_cols=140  Identities=26%  Similarity=0.322  Sum_probs=120.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCC-CCCCCeeEEccC--Cccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN-VKVGTPAAIMTF--GSYA  215 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~--G~~a  215 (282)
                      .++|.|.|+++||+||+++ ++|..|.+...+.+.....+|.++|||++|+|+++|++|++ |++||+|++...  |+|+
T Consensus        21 ~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a  100 (324)
T cd08291          21 PEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYA  100 (324)
T ss_pred             cccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCCCCcch
Confidence            3566788899999999999 99999988877764433457899999999999999999996 999999998765  9999


Q ss_pred             cEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEe-CCCchHHHHHHHHHHHh
Q 023465          216 EFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVT-AAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       216 e~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~-ga~g~vG~~a~q~a~~~  280 (282)
                      ||+++|++.++++|+  ++.++++++..++|||.+++.... ++++++|+ +++|++|++++|+||++
T Consensus       101 ~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~  167 (324)
T cd08291         101 EYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKAD  167 (324)
T ss_pred             heeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence            999999999999999  677888888889999876666655 56667676 78899999999999975

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.91  E-value=4.2e-24  Score=191.09  Aligned_cols=142  Identities=23%  Similarity=0.245  Sum_probs=118.5

Q ss_pred             CCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCc--eEEEEEeCCCCCCCCCCCeeEEccCCc
Q 023465          137 QVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEA--VGLIAAVGDSVNNVKVGTPAAIMTFGS  213 (282)
Q Consensus       137 ~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~G~  213 (282)
                      ..+.+.+.|+|+++||||||++ ++|+.|.+...+.+.....+|+++|+++  .|++..+|+++++|++||+|+..  |+
T Consensus        25 ~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~--g~  102 (338)
T cd08295          25 TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF--TG  102 (338)
T ss_pred             EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec--CC
Confidence            3444445688999999999999 9999998877664322235688999865  45666688999999999999865  79


Q ss_pred             cccEEeecC-CCeeeCC-C--ChH-HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPS-KHILPVA-R--PDP-EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~-~~~~~~p-~--~~~-~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+||+++|+ ..++++| +  ++. ++++++++++|||+++ +..++++|++|||+|++|++|++++|+||++
T Consensus       103 ~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~  175 (338)
T cd08295         103 WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLK  175 (338)
T ss_pred             ceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence            999999999 7899995 4  454 7889999999999999 5678899999999999999999999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.91  E-value=6.1e-24  Score=190.59  Aligned_cols=138  Identities=25%  Similarity=0.282  Sum_probs=115.5

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCC-cccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPF-DAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      .+.+.|.+.++||+|||++ ++|.+|.+++.+.... ...|. ++|||++|+|+++| .++.|++||||++.+       
T Consensus        16 ~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~-~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C   93 (350)
T COG1063          16 EEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF-VPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHC   93 (350)
T ss_pred             ccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC-CCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCC
Confidence            3444456789999999999 9999999999886432 23444 99999999999999 778899999999861       


Q ss_pred             --------------------------CCccccEEeecCCCeee-CCCC-hHHHHHhhhHHHHHHHHH-HHhCCCCCCEEE
Q 023465          211 --------------------------FGSYAEFTMVPSKHILP-VARP-DPEVVAMLTSGLTASIAL-EQAGPASGKKVL  261 (282)
Q Consensus       211 --------------------------~G~~ae~~~v~~~~~~~-~p~~-~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vl  261 (282)
                                                +|+|+||+.+|.+++++ +||. +.+.++|.+++.|+|++. .+...+++++|+
T Consensus        94 ~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~  173 (350)
T COG1063          94 RYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVV  173 (350)
T ss_pred             hhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEE
Confidence                                      18999999999766555 5787 999999999999998885 555566777999


Q ss_pred             EeCCCchHHHHHHHHHHHh
Q 023465          262 VTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       262 i~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|+ |++|++++|+||.+
T Consensus       174 V~Ga-GpIGLla~~~a~~~  191 (350)
T COG1063         174 VVGA-GPIGLLAIALAKLL  191 (350)
T ss_pred             EECC-CHHHHHHHHHHHHc
Confidence            9998 99999999999975

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.91  E-value=1.1e-23  Score=193.09  Aligned_cols=141  Identities=19%  Similarity=0.215  Sum_probs=111.3

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccc-cCCCCC-----CCCCCCcccCCceEEEEEeCCCCC-CCCCCCeeEEcc
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYF-SDGNDI-----GSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMT  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~-~~~~~~-----~~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~  210 (282)
                      ..++|.|.|+++||+|||++ ++|.+|.+.. .+....     ...+|+++|||++|+|+++|++|+ +|++||||++.+
T Consensus        16 ~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~   95 (410)
T cd08238          16 LEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQP   95 (410)
T ss_pred             EEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcC
Confidence            34677788999999999999 9999998865 332110     124688999999999999999998 699999998752


Q ss_pred             -----------------CCccccEEeecCC----CeeeCCC--ChHHHHHhhhHHHH---HHHHH---------HHhCCC
Q 023465          211 -----------------FGSYAEFTMVPSK----HILPVAR--PDPEVVAMLTSGLT---ASIAL---------EQAGPA  255 (282)
Q Consensus       211 -----------------~G~~ae~~~v~~~----~~~~~p~--~~~~~a~l~~~~~t---a~~~l---------~~~~~~  255 (282)
                                       .|+|+||+++|.+    .++++|+  ++.+++ +.+++++   ++.++         ++++++
T Consensus        96 ~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aa-l~epl~~~~~~~~a~~~~~~~~~~~~~~~~  174 (410)
T cd08238          96 ALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEAS-LVEPLSCVIGAYTANYHLQPGEYRHRMGIK  174 (410)
T ss_pred             CcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHh-hcchHHHHHHHhhhcccccccchhhhcCCC
Confidence                             4999999999987    6899999  455444 4333322   33332         356779


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+|+|++|++|++++|+||++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~  199 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHG  199 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhc
Confidence            9999999998899999999999985

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.91  E-value=1.4e-23  Score=190.20  Aligned_cols=138  Identities=22%  Similarity=0.253  Sum_probs=123.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .++|.|.+.++||+|||.+ ++|.+|.+...+.+  ...+|+++|||++|+|+++|++++.|++||+|++.         
T Consensus        23 ~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~--~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~  100 (373)
T cd08299          23 EEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL--VTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCR  100 (373)
T ss_pred             EEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC--CCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCCh
Confidence            4667788999999999999 99999998877654  33578999999999999999999999999999875         


Q ss_pred             ----------------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          210 ----------------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       210 ----------------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                              ..|+|+||++++.+.++++|+  ++.+++.+.+++.|||+
T Consensus       101 ~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~  180 (373)
T cd08299         101 ACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYG  180 (373)
T ss_pred             hhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHH
Confidence                                                    248999999999999999999  67888888899999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +.+.+++|++|||+|+ |++|++++|+|+++
T Consensus       181 ~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~  213 (373)
T cd08299         181 AAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAA  213 (373)
T ss_pred             HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            87 6678899999999975 99999999999976

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.90  E-value=3.4e-23  Score=186.84  Aligned_cols=141  Identities=28%  Similarity=0.301  Sum_probs=121.4

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCC------CCCCCeeEEc-
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN------VKVGTPAAIM-  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~-  209 (282)
                      ...+++.|.|+++||+|||.+ ++|+.|.....|.+.. ..+|.++|||++|+|+++|++|++      |++||+|+.. 
T Consensus        14 ~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~   92 (361)
T cd08231          14 EIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSV   92 (361)
T ss_pred             EEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcc
Confidence            345677788999999999999 9999998887765432 467899999999999999999986      9999999876 


Q ss_pred             ----------------------------------cCCccccEEeecCC-CeeeCCC--ChHHHHHhhhHHHHHHHHHHHh
Q 023465          210 ----------------------------------TFGSYAEFTMVPSK-HILPVAR--PDPEVVAMLTSGLTASIALEQA  252 (282)
Q Consensus       210 ----------------------------------~~G~~ae~~~v~~~-~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~  252 (282)
                                                        ..|+|+||+.++++ .++++|+  +..+++.++++++|||+++.+.
T Consensus        93 ~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~  172 (361)
T cd08231          93 GAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRA  172 (361)
T ss_pred             cCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhc
Confidence                                              24899999999996 7999999  5566666779999999999766


Q ss_pred             CC-CCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          253 GP-ASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       253 ~~-~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .. ++|++|||+|+ |++|++++|+|+++
T Consensus       173 ~~~~~g~~vlI~g~-g~vG~~~~~lak~~  200 (361)
T cd08231         173 GPVGAGDTVVVQGA-GPLGLYAVAAAKLA  200 (361)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            65 59999999985 99999999999975

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=6.3e-23  Score=184.15  Aligned_cols=137  Identities=20%  Similarity=0.258  Sum_probs=114.3

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      .+++.|.| .++||+|||.+ ++|..|.+......  ...+|.++|||++|+|+++|++|++|++||||++.+       
T Consensus        15 ~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c   92 (347)
T PRK10309         15 AESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG--AHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTC   92 (347)
T ss_pred             EECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC--CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCC
Confidence            45667776 58999999999 99999976432111  123688999999999999999999999999998753       


Q ss_pred             ---------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          211 ---------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       211 ---------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                           .|+|+||+.+|++.++++|+  ++++++. ..++.+++++++...+++|++|||+|+ |
T Consensus        93 ~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~-~~~~~~~~~~~~~~~~~~g~~vlV~G~-g  170 (347)
T PRK10309         93 PECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAF-IEPITVGLHAFHLAQGCEGKNVIIIGA-G  170 (347)
T ss_pred             cchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhh-hhHHHHHHHHHHhcCCCCCCEEEEECC-C
Confidence                                 59999999999999999999  5555554 446777898887788899999999986 9


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+++
T Consensus       171 ~vG~~~~~~a~~~  183 (347)
T PRK10309        171 TIGLLAIQCAVAL  183 (347)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999976

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.90  E-value=6e-23  Score=184.42  Aligned_cols=135  Identities=21%  Similarity=0.228  Sum_probs=111.0

Q ss_pred             cCCC-CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccC--CceEEEEEeCCCCCCCCCCCeeEEccCCccccEE
Q 023465          143 NVQL-PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGF--EAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFT  218 (282)
Q Consensus       143 ~~p~-~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~  218 (282)
                      +.|. +++|||||||++ ++|+.|.....+ +.....+|+++|+  |++|+|.++|+++++|++||+|+..  |+|+||+
T Consensus        36 ~~~~~~~~gevlVkv~a~~inp~~~~~~~~-~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~--~~~aey~  112 (348)
T PLN03154         36 ELKAPKGSGAFLVKNLYLSCDPYMRGRMRD-FHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI--TGWEEYS  112 (348)
T ss_pred             CCCCCCCCCeEEEEEEEEccCHHHHHhhhc-cCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec--CCcEEEE
Confidence            4443 479999999999 999987653222 1112246899998  8899999999999999999999865  7999999


Q ss_pred             eecCCC--eee--CCC--ChH-HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKH--ILP--VAR--PDP-EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~--~~~--~p~--~~~-~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++.+.  +.+  +|+  ++. ++++++++++|||+++ +..++++|++|||+|++|++|++++|+||++
T Consensus       113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~  182 (348)
T PLN03154        113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLH  182 (348)
T ss_pred             EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence            999854  544  477  454 6788999999999999 5678899999999999999999999999975

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.89  E-value=9.3e-23  Score=183.29  Aligned_cols=139  Identities=22%  Similarity=0.228  Sum_probs=121.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .+++.|.+.++||+|||++ ++|..|.+...+.+. ...+|.++|||++|+|+++|+++++|++||+|++.+        
T Consensus        15 ~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~-~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~   93 (351)
T cd08285          15 IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAP-GERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSV   93 (351)
T ss_pred             EECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCC-CCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCH
Confidence            3556677899999999999 999999887666532 235689999999999999999999999999999732        


Q ss_pred             -----------------------CCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEe
Q 023465          211 -----------------------FGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVT  263 (282)
Q Consensus       211 -----------------------~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~  263 (282)
                                             .|+|+||+.+|.+  .++++|+  ++.+++.++.++.|||++++++.+++|++|||+
T Consensus        94 ~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~  173 (351)
T cd08285          94 AAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVF  173 (351)
T ss_pred             HHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHHHccCCCCCCEEEEE
Confidence                                   5899999999974  8999998  677888888999999999988888999999999


Q ss_pred             CCCchHHHHHHHHHHHh
Q 023465          264 AAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       264 ga~g~vG~~a~q~a~~~  280 (282)
                      |+ |++|++++|+||++
T Consensus       174 g~-g~iG~~~~~lak~~  189 (351)
T cd08285         174 GI-GPVGLMAVAGARLR  189 (351)
T ss_pred             CC-CHHHHHHHHHHHHc
Confidence            75 99999999999976

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.89  E-value=1.2e-22  Score=182.62  Aligned_cols=140  Identities=24%  Similarity=0.293  Sum_probs=117.9

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCC-CC---------CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeE
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN-DI---------GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  207 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~-~~---------~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  207 (282)
                      ..+++.|.|+++||+||+.+ ++|+.|.+...+.. ..         ...+|.++|||++|+|+++|+++++|++||+|+
T Consensus        14 ~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~   93 (351)
T cd08233          14 VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVV   93 (351)
T ss_pred             EEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEE
Confidence            34667788999999999999 99999976544321 10         123689999999999999999999999999998


Q ss_pred             Ec---------------------------c--CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCC
Q 023465          208 IM---------------------------T--FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPAS  256 (282)
Q Consensus       208 ~~---------------------------~--~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~  256 (282)
                      ..                           .  +|+|+||+.++.+.++++|+  ++++++ +..++.|||+++....+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa-~~~~~~ta~~~l~~~~~~~  172 (351)
T cd08233          94 VEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAA-LVEPLAVAWHAVRRSGFKP  172 (351)
T ss_pred             ECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhh-hccHHHHHHHHHHhcCCCC
Confidence            62                           1  59999999999999999999  555655 4478899999998888899


Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHh
Q 023465          257 GKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       257 g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++|||+|+ |++|++++|+|+++
T Consensus       173 g~~vlI~g~-g~vG~~a~q~a~~~  195 (351)
T cd08233         173 GDTALVLGA-GPIGLLTILALKAA  195 (351)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc
Confidence            999999986 99999999999975

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.89  E-value=1e-22  Score=182.56  Aligned_cols=140  Identities=31%  Similarity=0.383  Sum_probs=122.8

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCC-------------------CCCCCCCcccCCceEEEEEeCCCCCCCC
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND-------------------IGSRLPFDAGFEAVGLIAAVGDSVNNVK  201 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~-------------------~~~~~p~~~G~e~~G~V~~vG~~v~~~~  201 (282)
                      ++.|.+.++||+|||.+ ++|..|.....+.+.                   ....+|.++|||++|+|+++|+++++|+
T Consensus        21 ~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  100 (350)
T cd08274          21 VPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTAR  100 (350)
T ss_pred             CCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCC
Confidence            34566789999999999 999999877655432                   1345789999999999999999999999


Q ss_pred             CCCeeEEcc--------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCE
Q 023465          202 VGTPAAIMT--------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKK  259 (282)
Q Consensus       202 ~Gd~V~~~~--------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~  259 (282)
                      +||+|++..                    .|+|++|+.++.+.++++|+  ++.+++++.+++.|||++++...+++|++
T Consensus       101 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~~~~~~~g~~  180 (350)
T cd08274         101 IGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGET  180 (350)
T ss_pred             CCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHHhhcCCCCCCE
Confidence            999998731                    48999999999999999999  67888999999999999998888899999


Q ss_pred             EEEeCCCchHHHHHHHHHHHhh
Q 023465          260 VLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       260 vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      |||+|++|++|++++|+|+++.
T Consensus       181 vlI~g~~g~ig~~~~~~a~~~g  202 (350)
T cd08274         181 VLVTGASGGVGSALVQLAKRRG  202 (350)
T ss_pred             EEEEcCCcHHHHHHHHHHHhcC
Confidence            9999999999999999999763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10083 putative oxidoreductase; Provisional

Probab=99.89  E-value=1.3e-22  Score=181.28  Aligned_cols=140  Identities=23%  Similarity=0.328  Sum_probs=119.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE----------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----------  208 (282)
                      .+++.|.|+++|++||+.+ ++|..|.+...+.+.. .++|.++|||++|+|+++|++|+.|++||+|++          
T Consensus        15 ~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~   93 (339)
T PRK10083         15 EERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCY   93 (339)
T ss_pred             EeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCc
Confidence            4667788899999999999 9999998887665432 356899999999999999999999999999984          


Q ss_pred             -----------------c-cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCch
Q 023465          209 -----------------M-TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG  268 (282)
Q Consensus       209 -----------------~-~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~  268 (282)
                                       . ..|+|+||+.++.+.++++|+  ++.+ +++..++.++|++++..++++|++|+|+|+ |+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~-a~~~~~~~~a~~~~~~~~~~~g~~vlI~g~-g~  171 (339)
T PRK10083         94 PCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQY-AVMVEPFTIAANVTGRTGPTEQDVALIYGA-GP  171 (339)
T ss_pred             cccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHH-HhhhchHHHHHHHHHhcCCCCCCEEEEECC-CH
Confidence                             2 258999999999999999999  4444 457788899997778888999999999995 99


Q ss_pred             HHHHHHHHHHHhhC
Q 023465          269 TGQFAVQVYFQIQG  282 (282)
Q Consensus       269 vG~~a~q~a~~~~~  282 (282)
                      +|++++|+|++++|
T Consensus       172 vG~~~~~~a~~~~G  185 (339)
T PRK10083        172 VGLTIVQVLKGVYN  185 (339)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999997533

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.89  E-value=7.8e-23  Score=182.84  Aligned_cols=140  Identities=21%  Similarity=0.249  Sum_probs=122.6

Q ss_pred             cccCCCCCC-CcEEEEEEc-cccccccccccCCCCCCCC----CCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC--C
Q 023465          141 NLNVQLPES-FEKLLWIYG-QVNFSSGRYFSDGNDIGSR----LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF--G  212 (282)
Q Consensus       141 ~~~~p~~~~-~~vlv~v~~-~~~~~d~~~~~~~~~~~~~----~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--G  212 (282)
                      ++|.|.|.+ +||+||+.+ ++|+.|.....+.......    +|.++|||++|+|+++|++++.|++||+|+....  |
T Consensus        20 ~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g   99 (341)
T cd08290          20 SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLG   99 (341)
T ss_pred             ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCCCCc
Confidence            455677777 999999999 9999998877665322222    6789999999999999999999999999998864  9


Q ss_pred             ccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          213 SYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       213 ~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+||+.++.+.++++|+  ++.++++++++++|||+++. ...+++|++|||+|++|++|++++|+|+++
T Consensus       100 ~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~  170 (341)
T cd08290         100 TWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLL  170 (341)
T ss_pred             cchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHc
Confidence            999999999999999999  67888899999999999994 467799999999999999999999999976

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.89  E-value=1.3e-22  Score=183.49  Aligned_cols=139  Identities=22%  Similarity=0.280  Sum_probs=122.8

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..+++.|.+.++||+|||.+ ++|..|.+...+.+.  ..+|.++|||++|+|+++|+++.+|++||+|++.        
T Consensus        17 ~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~   94 (365)
T cd08278          17 LEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECA   94 (365)
T ss_pred             EEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCCh
Confidence            34566788899999999999 999999888776532  3568899999999999999999999999999841        


Q ss_pred             ------------------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHH
Q 023465          210 ------------------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTA  245 (282)
Q Consensus       210 ------------------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta  245 (282)
                                                                ..|+|+||+.+++++++++|+  ++.+++.+++++.||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta  174 (365)
T cd08278          95 NCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTG  174 (365)
T ss_pred             HHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhh
Confidence                                                      248999999999999999999  788889999999999


Q ss_pred             HHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++ +...+++|++|||+|+ |++|++++|+|+++
T Consensus       175 ~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~  209 (365)
T cd08278         175 AGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIA  209 (365)
T ss_pred             hHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9998 6677899999999976 99999999999975

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.89  E-value=1.5e-22  Score=180.12  Aligned_cols=132  Identities=19%  Similarity=0.129  Sum_probs=111.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFT  218 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~  218 (282)
                      .+++.|.|++|||||||++ ++|+.+..   +.+. ....|.++|.|++|+|+++|+   +|++||||+..  ++|+||+
T Consensus        22 ~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~-~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--~~~~~~~   92 (325)
T TIGR02825        22 KTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR-LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS--PGWTSHS   92 (325)
T ss_pred             EeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc-CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe--cCceeeE
Confidence            4677889999999999999 99986533   2221 123478999999999999874   69999999975  5899999


Q ss_pred             eecCCCeeeC----CC--ChHHH-HHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPV----AR--PDPEV-VAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~----p~--~~~~~-a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++.+.+.++    |+  +++++ ++++++++|||+++ +.+++++|++|||+|++|++|++++|+||++
T Consensus        93 ~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~  162 (325)
T TIGR02825        93 ISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLK  162 (325)
T ss_pred             EechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHc
Confidence            9999988777    77  56666 67899999999998 7788899999999999999999999999975

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.89  E-value=1.4e-22  Score=180.95  Aligned_cols=139  Identities=21%  Similarity=0.267  Sum_probs=122.8

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|.+.++||+|||++ ++|..|.....+.+.  ...|.++|||++|+|+++|+++++|++||+|++.        
T Consensus        15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~   92 (338)
T PRK09422         15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG--DKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGH   92 (338)
T ss_pred             EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC--CCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCC
Confidence            35667788999999999999 999999877766532  2347899999999999999999999999999861        


Q ss_pred             ---------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          210 ---------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                           ..|+|+||+.++.++++++|+  ++.++++++.++.|||++++.+++++|++|||+|+ 
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~-  171 (338)
T PRK09422         93 CEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGA-  171 (338)
T ss_pred             ChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHhcCCCCCCEEEEECC-
Confidence                                 158999999999999999999  68889999999999999998888899999999995 


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      |++|++++|+|+++
T Consensus       172 g~vG~~~~~la~~~  185 (338)
T PRK09422        172 GGLGNLALQYAKNV  185 (338)
T ss_pred             cHHHHHHHHHHHHh
Confidence            99999999999975

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.89  E-value=1.3e-22  Score=180.37  Aligned_cols=141  Identities=48%  Similarity=0.693  Sum_probs=125.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFT  218 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~  218 (282)
                      .+++.|.+.++|++|||.+ ++|+.|.....+.+.....+|.++|||++|+|+++|+++++|++||+|++...|+|++|+
T Consensus        21 ~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~  100 (329)
T cd08250          21 VDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQ  100 (329)
T ss_pred             EecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEE
Confidence            4556677899999999999 999999887666543335678999999999999999999999999999998889999999


Q ss_pred             eecCCCeeeCCCChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVARPDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .++.+.++++|+...+++++++++.|||+++. ...+++|++|+|+|++|++|++++|+|+++
T Consensus       101 ~v~~~~~~~ip~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~  163 (329)
T cd08250         101 VVPARHAVPVPELKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLA  163 (329)
T ss_pred             EechHHeEECCCCcchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHc
Confidence            99999999999965677889999999999994 467799999999999999999999999975

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.89  E-value=2.7e-22  Score=179.28  Aligned_cols=141  Identities=29%  Similarity=0.457  Sum_probs=123.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCC--CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND--IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      .+++.|.+.++|++||+.+ ++|..|.....+.+.  .+..+|.++|||++|+|+++|+++.+|++||+|++..      
T Consensus        16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   95 (340)
T cd05284          16 EDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGT   95 (340)
T ss_pred             EeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCC
Confidence            3556677899999999999 999999887766543  3456689999999999999999999999999998753      


Q ss_pred             ----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHh--CCCCCCEEEEeC
Q 023465          211 ----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQA--GPASGKKVLVTA  264 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~--~~~~g~~vli~g  264 (282)
                                            .|+|+||+.++.++++++|+  ++++++++++.+.|||+++...  .+++|++|||+|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g  175 (340)
T cd05284          96 CRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG  175 (340)
T ss_pred             ChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEc
Confidence                                  58999999999999999999  6888999999999999999554  568899999999


Q ss_pred             CCchHHHHHHHHHHHhh
Q 023465          265 AAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       265 a~g~vG~~a~q~a~~~~  281 (282)
                      + |++|++++|+|+++.
T Consensus       176 ~-~~vg~~~~~~a~~~g  191 (340)
T cd05284         176 V-GGLGHIAVQILRALT  191 (340)
T ss_pred             C-cHHHHHHHHHHHHhC
Confidence            6 779999999999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.89  E-value=2.5e-22  Score=179.22  Aligned_cols=139  Identities=31%  Similarity=0.433  Sum_probs=122.5

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .+++.|.++++||+||+.+ ++|..|.....+... ...+|.++|||++|+|+++|+++++|++||+|++.         
T Consensus        16 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~   94 (333)
T cd08296          16 VERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMP-GLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTC   94 (333)
T ss_pred             EeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCC-CCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCC
Confidence            4566788899999999999 999999887766432 23568899999999999999999999999999862         


Q ss_pred             -------------------c-CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          210 -------------------T-FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       210 -------------------~-~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                         . .|+|+||+.++.+.++++|+  ++.+++.+++++.|||++++...+++|++|||+| +|
T Consensus        95 ~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~vlV~g-~g  173 (333)
T cd08296          95 DACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQG-IG  173 (333)
T ss_pred             hhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEEC-Cc
Confidence                               1 48999999999999999999  6778888999999999999777889999999999 69


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+||++
T Consensus       174 ~iG~~~~~~a~~~  186 (333)
T cd08296         174 GLGHLAVQYAAKM  186 (333)
T ss_pred             HHHHHHHHHHHHC
Confidence            9999999999985

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.88  E-value=3.1e-22  Score=179.03  Aligned_cols=140  Identities=18%  Similarity=0.190  Sum_probs=120.1

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCC----------CCCCCCCcccCCceEEEEEeCCCCCC-CCCCCeeE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND----------IGSRLPFDAGFEAVGLIAAVGDSVNN-VKVGTPAA  207 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~----------~~~~~p~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~  207 (282)
                      .+++.|+++++||+||+.+ ++|+.|.+...+...          ....+|.++|||++|+|+++|+++++ |++||+|+
T Consensus        14 ~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~   93 (341)
T cd08262          14 RDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVT   93 (341)
T ss_pred             EecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEE
Confidence            4567788999999999999 999999887765211          12235789999999999999999997 99999999


Q ss_pred             Ec------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          208 IM------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       208 ~~------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                      ..                  ..|+|+||++++.+.++++|+  ++.++ +++.++++||++++.+++++|++|||+|+ |
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a-~~~~~~~~a~~~~~~~~~~~g~~VlI~g~-g  171 (341)
T cd08262          94 SLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDA-ALTEPLAVGLHAVRRARLTPGEVALVIGC-G  171 (341)
T ss_pred             ecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHh-hhhhhHHHHHHHHHhcCCCCCCEEEEECC-C
Confidence            87                  469999999999999999999  45544 47789999999988888899999999985 9


Q ss_pred             hHHHHHHHHHHHhh
Q 023465          268 GTGQFAVQVYFQIQ  281 (282)
Q Consensus       268 ~vG~~a~q~a~~~~  281 (282)
                      ++|.+++|+|+++.
T Consensus       172 ~vg~~~~~la~~~G  185 (341)
T cd08262         172 PIGLAVIAALKARG  185 (341)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999999763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.88  E-value=3.4e-22  Score=180.71  Aligned_cols=138  Identities=20%  Similarity=0.221  Sum_probs=121.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .+++.|.++++||+||+.+ ++|..|.+...+.+  ...+|.++|||++|+|+++|++++.+++||+|++..        
T Consensus        16 ~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~--~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~   93 (365)
T cd05279          16 EEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL--PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCK   93 (365)
T ss_pred             EEeecCCCCCCeEEEEEEEeeecchhHHHhcCCC--CCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCCh
Confidence            4566788999999999999 99999988877653  235678999999999999999999999999998752        


Q ss_pred             -----------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          211 -----------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       211 -----------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                               .|+|+||+.++++.++++|+  ++.+++.+.+++.|||+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~  173 (365)
T cd05279          94 QCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYG  173 (365)
T ss_pred             hhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHH
Confidence                                                     37899999999999999999  67788888889999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +.+++++|++|||+|+ |++|++++|+|+++
T Consensus       174 al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~  206 (365)
T cd05279         174 AAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAA  206 (365)
T ss_pred             HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            87 6678899999999975 99999999999976

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.88  E-value=3.7e-22  Score=182.11  Aligned_cols=143  Identities=27%  Similarity=0.329  Sum_probs=121.5

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCC--------CC-CCCCCcccCCceEEEEEeCCCCCCCCCCCeeE
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND--------IG-SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  207 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~--------~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  207 (282)
                      +..+++.|.++++||+|||.+ ++|..|.+...+...        .+ ...+.++|||++|+|+++|++++.|++||+|+
T Consensus        31 ~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  110 (393)
T cd08246          31 QLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVV  110 (393)
T ss_pred             EEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEE
Confidence            445667788999999999999 999998776554310        00 11235899999999999999999999999998


Q ss_pred             Ecc-----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH---hC
Q 023465          208 IMT-----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ---AG  253 (282)
Q Consensus       208 ~~~-----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~---~~  253 (282)
                      +.+                             .|+|+||++++...++++|+  ++.+++.+++++.|||+++..   ++
T Consensus       111 ~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~  190 (393)
T cd08246         111 VHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNT  190 (393)
T ss_pred             EeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhccccc
Confidence            864                             39999999999999999999  677888899999999999843   57


Q ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          254 PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       254 ~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++|+|+|++|++|++++|+|+++
T Consensus       191 ~~~g~~vlV~ga~g~iG~a~~~lak~~  217 (393)
T cd08246         191 VKPGDNVLIWGASGGLGSMAIQLARAA  217 (393)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence            799999999999999999999999976

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.88  E-value=6.4e-22  Score=176.93  Aligned_cols=142  Identities=25%  Similarity=0.392  Sum_probs=125.2

Q ss_pred             CCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE-------
Q 023465          137 QVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-------  208 (282)
Q Consensus       137 ~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-------  208 (282)
                      ....+++.|.|.++|++||+.+ ++|..|.+...+.+. ...+|.++|||++|+|+++|+++++|++||+|++       
T Consensus        12 ~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~   90 (337)
T cd05283          12 LEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSC   90 (337)
T ss_pred             ceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCC
Confidence            3456677888999999999999 999999888776542 3456899999999999999999999999999973       


Q ss_pred             -----------------------------ccCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCC
Q 023465          209 -----------------------------MTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASG  257 (282)
Q Consensus       209 -----------------------------~~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g  257 (282)
                                                   ...|+|+||+.++.+.++++|+  ++.+++.+.+.+.|||+++++.++++|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g  170 (337)
T cd05283          91 GTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPG  170 (337)
T ss_pred             CCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence                                         2258999999999999999998  678888899999999999988888999


Q ss_pred             CEEEEeCCCchHHHHHHHHHHHh
Q 023465          258 KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       258 ~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|+|.|+ |++|++++|+|+++
T Consensus       171 ~~vlV~g~-g~vG~~~~~~a~~~  192 (337)
T cd05283         171 KRVGVVGI-GGLGHLAVKFAKAL  192 (337)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHc
Confidence            99999875 99999999999975

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.88  E-value=2.9e-22  Score=179.43  Aligned_cols=140  Identities=21%  Similarity=0.232  Sum_probs=122.8

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE---------
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI---------  208 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~---------  208 (282)
                      .+++.|.| .++||+|||.+ ++|+.|.....+.+.. ..+|.++|||++|+|+++|+++++|++||+|++         
T Consensus        15 ~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~   93 (347)
T cd05278          15 EEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRC   93 (347)
T ss_pred             EEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCC
Confidence            45666778 89999999999 9999998877765432 456899999999999999999999999999997         


Q ss_pred             ----------------------ccCCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          209 ----------------------MTFGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       209 ----------------------~~~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                                            ...|+|+||++++.+  .++++|+  ++.+++++++++.|||++++...+++|++|||
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~VlI  173 (347)
T cd05278          94 RFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAV  173 (347)
T ss_pred             hhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehhhhcCCCCCCEEEE
Confidence                                  235899999999997  8999999  67888899999999999997778899999999


Q ss_pred             eCCCchHHHHHHHHHHHhh
Q 023465          263 TAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       263 ~ga~g~vG~~a~q~a~~~~  281 (282)
                      .|+ |++|++++|+|+++.
T Consensus       174 ~g~-g~vg~~~iqlak~~g  191 (347)
T cd05278         174 IGA-GPVGLCAVAGARLLG  191 (347)
T ss_pred             ECC-CHHHHHHHHHHHHcC
Confidence            875 999999999999763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.88  E-value=5.4e-22  Score=180.67  Aligned_cols=140  Identities=20%  Similarity=0.169  Sum_probs=122.9

Q ss_pred             CccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          139 PLNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       139 ~~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ..+++.|.| .++||+||+.+ ++|.+|.....|.+.. .++|.++|||++|+|+++|+++++|++||+|++..      
T Consensus        14 ~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~   92 (386)
T cd08283          14 VEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGE   92 (386)
T ss_pred             EEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCC
Confidence            345566777 49999999999 9999999888776533 35689999999999999999999999999998742      


Q ss_pred             ------------------------------------------CCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLT  244 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~t  244 (282)
                                                                .|+|+||++++.+  .++++|+  ++.++++++++.+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  172 (386)
T cd08283          93 CFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPT  172 (386)
T ss_pred             ChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhh
Confidence                                                      4899999999988  8899999  78888889999999


Q ss_pred             HHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          245 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       245 a~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ||++++...+++|++|||+|+ |++|++++|+|+++
T Consensus       173 a~~~l~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~  207 (386)
T cd08283         173 GYHAAELAEVKPGDTVAVWGC-GPVGLFAARSAKLL  207 (386)
T ss_pred             hHHHHhhccCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            999997788899999999975 99999999999976

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.88  E-value=7.7e-22  Score=175.32  Aligned_cols=140  Identities=26%  Similarity=0.358  Sum_probs=124.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .++|.|.+.++||+|++++ ++|+.|.+...+.++ ....|.++|||++|+|+++|+++++|++||+|++..        
T Consensus        16 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~   94 (332)
T cd08259          16 EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP-RGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCE   94 (332)
T ss_pred             EEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCC-CCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCCh
Confidence            3566788899999999999 999999888766543 235678999999999999999999999999999875        


Q ss_pred             --------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCch
Q 023465          211 --------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG  268 (282)
Q Consensus       211 --------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~  268 (282)
                                          .|+|++|++++...++++|+  ++++++.+++++.|||++++.+.++++++|||+|++|+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~  174 (332)
T cd08259          95 YCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGG  174 (332)
T ss_pred             hhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence                                68999999999999999999  67888889999999999996688899999999999999


Q ss_pred             HHHHHHHHHHHh
Q 023465          269 TGQFAVQVYFQI  280 (282)
Q Consensus       269 vG~~a~q~a~~~  280 (282)
                      +|++++++++++
T Consensus       175 vG~~~~~~a~~~  186 (332)
T cd08259         175 VGIHAIQLAKAL  186 (332)
T ss_pred             HHHHHHHHHHHc
Confidence            999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.88  E-value=5.1e-22  Score=176.56  Aligned_cols=134  Identities=20%  Similarity=0.155  Sum_probs=112.8

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCcccc
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAE  216 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae  216 (282)
                      +..+++.|.|+++||||||++ ++|+.+..+...    ..++|.++|+|++|+|++   .+++|++||||+..  ++|+|
T Consensus        22 ~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~--~~~~~   92 (329)
T cd08294          22 ELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS--FGWRT   92 (329)
T ss_pred             EEEecCCCCCCCCcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEEEEec---CCCCCCCCCEEEee--CCeee
Confidence            335677899999999999999 999887543211    124688999999999985   45789999999875  68999


Q ss_pred             EEeecCC---CeeeCCC--C-----hHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSK---HILPVAR--P-----DPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~---~~~~~p~--~-----~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++++.+   .++++|+  +     ....++++++++|||+++ +..++++|++|||+|++|++|++++|+|+++
T Consensus        93 ~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~  167 (329)
T cd08294          93 HTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIK  167 (329)
T ss_pred             EEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence            9999999   9999999  3     133457889999999999 6678899999999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.88  E-value=6.5e-22  Score=175.94  Aligned_cols=140  Identities=23%  Similarity=0.257  Sum_probs=122.4

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFT  218 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~  218 (282)
                      +.+.|.+.++|++|||.+ ++|..|.....+.+......|.++|||++|+|+++|++++++++||+|+... +|+|+||+
T Consensus        20 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~   99 (334)
T PTZ00354         20 ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYA   99 (334)
T ss_pred             eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEE
Confidence            344566889999999999 9999887776665433345577999999999999999999999999999874 59999999


Q ss_pred             eecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++.+.++++|+  ++.+++.+++++.|||+++.. ..+++|++|+|+|++|++|++++|+|+++
T Consensus       100 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~  164 (334)
T PTZ00354        100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKY  164 (334)
T ss_pred             EecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc
Confidence            999999999999  677888899999999999944 67899999999999999999999999976

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.88  E-value=1e-21  Score=175.70  Aligned_cols=142  Identities=25%  Similarity=0.401  Sum_probs=124.8

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..+++.|.+.++|++||+.+ ++|+.|.....+.+......|.++|||++|+|+++|++++.|++||+|+..        
T Consensus        16 ~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~   95 (341)
T cd08297          16 VKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGK   95 (341)
T ss_pred             EEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCC
Confidence            34566788899999999999 999999877766543334557789999999999999999999999999864        


Q ss_pred             ---------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          210 ---------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                           ..|+|++|+.++.+.++++|+  ++.++++++..+.|||+++...+++++++|||+|++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~~~~~~~~vlV~g~~  175 (341)
T cd08297          96 CEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAG  175 (341)
T ss_pred             CccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhcCCCCCCEEEEECCC
Confidence                                 258999999999999999999  678888899999999999977788999999999998


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      +++|++++|+|+++
T Consensus       176 ~~vg~~~~~~a~~~  189 (341)
T cd08297         176 GGLGHLGVQYAKAM  189 (341)
T ss_pred             chHHHHHHHHHHHC
Confidence            88999999999976

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.87  E-value=4.5e-23  Score=163.39  Aligned_cols=108  Identities=31%  Similarity=0.403  Sum_probs=99.8

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM   76 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~   76 (282)
                      ++++++|||+||+.|..+..++..|++||+++.+|||+.++ +++++||||.++|||+.|||....+++..+      |+
T Consensus       140 ~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPm  219 (256)
T KOG1200|consen  140 QQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPM  219 (256)
T ss_pred             cCCCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCc
Confidence            34456999999999999999999999999999999999998 999999999999999999999888776554      67


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +|.+++||+|+.++||+|+.++|.+|..+..+|++
T Consensus       220 gr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  220 GRLGEAEEVANLVLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             cccCCHHHHHHHHHHHhccccccccceeEEEeccc
Confidence            89999999999999999999999999999888875

>cd08251 polyketide_synthase polyketide synthase

Probab=99.87  E-value=1.6e-21  Score=170.64  Aligned_cols=137  Identities=30%  Similarity=0.352  Sum_probs=123.4

Q ss_pred             CCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC---CccccEEe
Q 023465          144 VQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF---GSYAEFTM  219 (282)
Q Consensus       144 ~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---G~~ae~~~  219 (282)
                      .|.+.++|++||+.+ ++|+.|.....+.+.....+|.++|||++|+|+++|+++++|++||+|++...   |+|++|+.
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            477899999999999 99999987776654333456889999999999999999999999999998765   99999999


Q ss_pred             ecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          220 VPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       220 v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++.+.++++|+  +..++++++.++.|||++++...+++|++|+|++++|++|++++|+|+++
T Consensus        82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~  144 (303)
T cd08251          82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK  144 (303)
T ss_pred             ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc
Confidence            99999999999  67888999999999999998888899999999999999999999999976

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.87  E-value=1.4e-21  Score=171.80  Aligned_cols=135  Identities=25%  Similarity=0.404  Sum_probs=120.4

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFT  218 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~  218 (282)
                      +.+.|.+.++||+||+.+ ++|..|.+....     ...|.++|||++|+|+++|+++..|++||+|+... .|+|++|+
T Consensus        18 ~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-----~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~   92 (305)
T cd08270          18 EVPDPQPAPHEALVRVAAISLNRGELKFAAE-----RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELV   92 (305)
T ss_pred             ecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-----CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEE
Confidence            556677899999999999 999999776541     13467899999999999999999999999999875 79999999


Q ss_pred             eecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .++.+.++++|+  ++.+++++++.+.|||+++.+....+|++|+|+|++|++|++++|+|+++
T Consensus        93 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~  156 (305)
T cd08270          93 AVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALA  156 (305)
T ss_pred             EEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence            999999999999  78889999999999999997766667999999999999999999999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.87  E-value=1.6e-21  Score=174.48  Aligned_cols=139  Identities=21%  Similarity=0.201  Sum_probs=121.7

Q ss_pred             CccccCCCCC-CCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          139 PLNLNVQLPE-SFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       139 ~~~~~~p~~~-~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ..++++|.|. ++||+||+.+ ++|+.|.....+.+.  ..+|.++|||++|+|+++|++|+++++||+|++..      
T Consensus        14 ~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   91 (344)
T cd08284          14 VEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGE   91 (344)
T ss_pred             EEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCC
Confidence            4556778875 9999999999 999999887766532  34578999999999999999999999999999753      


Q ss_pred             --------------------------CCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEE
Q 023465          211 --------------------------FGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKV  260 (282)
Q Consensus       211 --------------------------~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~v  260 (282)
                                                .|+|+||+.++++  .++++|+  +++++++++++++|||++++...+++|++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~v  171 (344)
T cd08284          92 CFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTV  171 (344)
T ss_pred             ChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEE
Confidence                                      4899999999975  9999999  688889999999999999977788999999


Q ss_pred             EEeCCCchHHHHHHHHHHHh
Q 023465          261 LVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       261 li~ga~g~vG~~a~q~a~~~  280 (282)
                      ||+| +|++|++++|+|+++
T Consensus       172 lI~g-~g~vg~~~~~~a~~~  190 (344)
T cd08284         172 AVIG-CGPVGLCAVLSAQVL  190 (344)
T ss_pred             EEEC-CcHHHHHHHHHHHHc
Confidence            9997 599999999999975

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.87  E-value=2.5e-21  Score=173.92  Aligned_cols=141  Identities=19%  Similarity=0.227  Sum_probs=119.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC--------CCCCCCcccCCceEEEEEeCCCCC--CCCCCCeeE
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI--------GSRLPFDAGFEAVGLIAAVGDSVN--NVKVGTPAA  207 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG~~v~--~~~~Gd~V~  207 (282)
                      ..+++.|++.++||+||+.+ ++|+.|.+...+....        ..++|.++|||++|+|+++|++|+  +|++||+|+
T Consensus        14 ~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~   93 (350)
T cd08256          14 LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVI   93 (350)
T ss_pred             EEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEE
Confidence            34566788999999999999 9999998876654211        124678999999999999999999  999999998


Q ss_pred             E---------------------------c---cCCccccEEeecCC-CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCC
Q 023465          208 I---------------------------M---TFGSYAEFTMVPSK-HILPVAR--PDPEVVAMLTSGLTASIALEQAGP  254 (282)
Q Consensus       208 ~---------------------------~---~~G~~ae~~~v~~~-~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~  254 (282)
                      .                           .   ..|+|+||+.++++ .++++|+  ++.+++.+ .+++|+|++++.+.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~~~~~~  172 (350)
T cd08256          94 SEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAVDRANI  172 (350)
T ss_pred             ECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHHHhcCC
Confidence            7                           2   35999999999988 5789999  56677766 899999999987888


Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          255 ASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       255 ~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++|++|+|.|+ |++|++++|+|+++.
T Consensus       173 ~~g~~vlI~g~-g~vG~~~~~~a~~~G  198 (350)
T cd08256         173 KFDDVVVLAGA-GPLGLGMIGAARLKN  198 (350)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            99999999555 999999999999863

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.87  E-value=2.4e-21  Score=174.18  Aligned_cols=135  Identities=21%  Similarity=0.157  Sum_probs=116.4

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC-CCCCCCeeEEcc------CCccccEE
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMT------FGSYAEFT  218 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~------~G~~ae~~  218 (282)
                      ++++||+||+.+ ++|+.|.....+........|.++|||++|+|+++|++++ +|++||+|+...      .|+|+||+
T Consensus        26 ~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~  105 (352)
T cd08247          26 YKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYL  105 (352)
T ss_pred             CCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEE
Confidence            389999999999 9999997665432111112378999999999999999998 999999999875      69999999


Q ss_pred             eecCC----CeeeCCC--ChHHHHHhhhHHHHHHHHHHHh--CCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          219 MVPSK----HILPVAR--PDPEVVAMLTSGLTASIALEQA--GPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       219 ~v~~~----~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~--~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      +++..    .++++|+  ++.+++.++.++.|||++++..  .+++|++|+|+|++|++|++++|+|+++.
T Consensus       106 ~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~  176 (352)
T cd08247         106 LVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHY  176 (352)
T ss_pred             EEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcC
Confidence            99987    7899999  7888899999999999999665  58999999999999999999999999763

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.87  E-value=1.7e-21  Score=174.72  Aligned_cols=142  Identities=25%  Similarity=0.364  Sum_probs=121.7

Q ss_pred             CccccCCCC-CCCcEEEEEEc-cccccccccccCCCC--------------CCCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          139 PLNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGND--------------IGSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       139 ~~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~--------------~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      ..+++.|.| +++||+|||.+ ++|..|.....+...              ....+|.++|||++|+|+++|+++++|++
T Consensus        18 ~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~   97 (350)
T cd08248          18 LENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEI   97 (350)
T ss_pred             ecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCC
Confidence            345677888 49999999999 999999877655311              02356889999999999999999999999


Q ss_pred             CCeeEEcc----CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCC----CCCEEEEeCCCchHHH
Q 023465          203 GTPAAIMT----FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPA----SGKKVLVTAAAGGTGQ  271 (282)
Q Consensus       203 Gd~V~~~~----~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~----~g~~vli~ga~g~vG~  271 (282)
                      ||||++..    .|+|+||+.++.+.++++|+  ++.+++.+++++.|||+++.+ ..+.    +|++|+|+|++|++|+
T Consensus        98 Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~  177 (350)
T cd08248          98 GDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT  177 (350)
T ss_pred             CCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHH
Confidence            99999865    69999999999999999999  677888899999999999844 4444    4999999999999999


Q ss_pred             HHHHHHHHh
Q 023465          272 FAVQVYFQI  280 (282)
Q Consensus       272 ~a~q~a~~~  280 (282)
                      +++++|+++
T Consensus       178 ~~~~~a~~~  186 (350)
T cd08248         178 FAIQLLKAW  186 (350)
T ss_pred             HHHHHHHHC
Confidence            999999875

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.87  E-value=2.1e-21  Score=172.70  Aligned_cols=141  Identities=26%  Similarity=0.407  Sum_probs=124.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC-CccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-GSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-G~~ae~  217 (282)
                      .+.+.|.|.++||+|++.+ ++|..|.....+.+.....+|.++|||++|+|+++|+++++|++||+|++... |+|++|
T Consensus        18 ~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~   97 (331)
T cd08273          18 VEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEY   97 (331)
T ss_pred             eccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeE
Confidence            3446677889999999999 99999887766654323356889999999999999999999999999999865 999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++.+.++++|+  +..+++.+++++.|||+++.+ ..+++|++|+|+|++|++|++++|+|+++
T Consensus        98 ~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~  163 (331)
T cd08273          98 INLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLA  163 (331)
T ss_pred             EEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence            9999999999999  677888899999999999944 67899999999999999999999999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-21  Score=173.48  Aligned_cols=141  Identities=25%  Similarity=0.284  Sum_probs=124.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|.++++|++||+.+ ++|+.|.+...+.+. ..++|.++|||++|+|+++|++++.+++||+|++..       
T Consensus        15 ~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~   93 (334)
T PRK13771         15 IEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTC   93 (334)
T ss_pred             EEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC-CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCC
Confidence            34566788899999999999 999999877666432 235678999999999999999999999999999864       


Q ss_pred             ---------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          211 ---------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       211 ---------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                           .|+|++|+.++.+.++++|+  ++.+++.+.+++.+||+++....++++++|+|+|++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g  173 (334)
T PRK13771         94 EYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGG  173 (334)
T ss_pred             hhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence                                 68999999999999999999  6778888899999999999767889999999999999


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+++
T Consensus       174 ~~g~~~~~la~~~  186 (334)
T PRK13771        174 GVGIHAIQVAKAL  186 (334)
T ss_pred             cHHHHHHHHHHHc
Confidence            9999999999986

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.87  E-value=2.2e-21  Score=171.94  Aligned_cols=139  Identities=29%  Similarity=0.337  Sum_probs=121.6

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCCC--CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc---CCccc
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI--GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT---FGSYA  215 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~G~~a  215 (282)
                      .+.|.+.++||+|++++ ++|+.|.....+....  ...+|.++|||++|+|+++|+++.++++||+|++..   .|+|+
T Consensus        20 ~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~   99 (324)
T cd08244          20 VPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYA   99 (324)
T ss_pred             cCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCCCCceee
Confidence            33456789999999999 9999998776654321  235678999999999999999999999999999987   79999


Q ss_pred             cEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          216 EFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       216 e~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+.++.++++++|+  ++.+++++++++.|||..++...++++++|+|+|++|++|++++|+|+++
T Consensus       100 ~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~  166 (324)
T cd08244         100 ELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAA  166 (324)
T ss_pred             EEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence            999999999999999  67888899999999966567788899999999999999999999999986

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.87  E-value=1.3e-21  Score=177.42  Aligned_cols=139  Identities=22%  Similarity=0.221  Sum_probs=119.8

Q ss_pred             CccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          139 PLNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       139 ~~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ..++|+|.+ .++||+|||++ ++|..|.+...+.+.  ..+|.++|||++|+|+++|++++.+++||+|+..       
T Consensus        14 ~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~   91 (375)
T cd08282          14 VEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGR   91 (375)
T ss_pred             EEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCC
Confidence            345667775 78999999999 999999888776543  3568999999999999999999999999999862       


Q ss_pred             c-------------------------------CCccccEEeecCC--CeeeCCC--ChH---HHHHhhhHHHHHHHHHHH
Q 023465          210 T-------------------------------FGSYAEFTMVPSK--HILPVAR--PDP---EVVAMLTSGLTASIALEQ  251 (282)
Q Consensus       210 ~-------------------------------~G~~ae~~~v~~~--~~~~~p~--~~~---~~a~l~~~~~ta~~~l~~  251 (282)
                      +                               +|+|+||+.+|.+  .++++|+  ++.   +++++.++++|||+++..
T Consensus        92 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~~~  171 (375)
T cd08282          92 CRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLEL  171 (375)
T ss_pred             CHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHHHh
Confidence            1                               3889999999976  8999999  555   467788899999999977


Q ss_pred             hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          252 AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       252 ~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.+++|++|+|.|+ |++|++++|+||++
T Consensus       172 ~~~~~g~~vlI~g~-g~vg~~~~~~a~~~  199 (375)
T cd08282         172 AGVQPGDTVAVFGA-GPVGLMAAYSAILR  199 (375)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            88899999999876 99999999999975

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.87  E-value=3.3e-21  Score=170.89  Aligned_cols=140  Identities=21%  Similarity=0.379  Sum_probs=119.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------C
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------F  211 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------~  211 (282)
                      .++|.|.++++||+||+.+ ++|..|.....+.+.....+|.++|||++|+|+++  +++.|++||+|++..       .
T Consensus        18 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~   95 (325)
T cd05280          18 RTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTD   95 (325)
T ss_pred             EeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccccCCCCC
Confidence            4567788899999999999 99999988877664333456889999999999999  567899999999863       6


Q ss_pred             CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHh---CCC-CCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          212 GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQA---GPA-SGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       212 G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~---~~~-~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      |+|+||+.++.+.++++|+  ++.+++.+++.+.|||+++...   +++ .+++|+|+|++|++|++++|+|+++.
T Consensus        96 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g  171 (325)
T cd05280          96 GGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLG  171 (325)
T ss_pred             ceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcC
Confidence            9999999999999999999  6888999999999999998543   334 46799999999999999999999763

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.87  E-value=2.1e-21  Score=171.99  Aligned_cols=140  Identities=25%  Similarity=0.361  Sum_probs=123.3

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFT  218 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~  218 (282)
                      +.+.|.+.++||+|||++ ++|..|.....+.+......|.++|||++|+|+++|++++++++||+|++.. .|+|++|+
T Consensus        18 ~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~   97 (323)
T cd05282          18 SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYV   97 (323)
T ss_pred             eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEE
Confidence            345677899999999999 9999988776655433345678999999999999999999999999999987 79999999


Q ss_pred             eecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .++.+.++++|+  ++.+++.++....|||+++ +...+++|++|||+|++|++|++++|+|+++
T Consensus        98 ~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~  162 (323)
T cd05282          98 VAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL  162 (323)
T ss_pred             ecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence            999999999999  6778888889999999998 4456699999999999999999999999986

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.87  E-value=1.9e-21  Score=172.72  Aligned_cols=139  Identities=30%  Similarity=0.416  Sum_probs=121.1

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc----------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM----------  209 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------  209 (282)
                      +.+.|.++++||+||+.+ ++|+.|.....+. . ...+|.++|||++|+|+++|+++++|++||+|+..          
T Consensus        18 ~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~   95 (325)
T cd08264          18 DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-K-VKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDM   95 (325)
T ss_pred             eccCCCCCCCeEEEEEEEEEechHHHHHHhCC-C-CCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChh
Confidence            344456889999999999 9999997765432 1 12357899999999999999999999999999875          


Q ss_pred             ------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchH
Q 023465          210 ------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGT  269 (282)
Q Consensus       210 ------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~v  269 (282)
                                        ..|+|++|+.++++.++++|+  ++++++.+++++.|||+++..+++++|++|+|+|++|++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~v  175 (325)
T cd08264          96 CLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNT  175 (325)
T ss_pred             hcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchH
Confidence                              358999999999999999999  678888899999999999977888999999999999999


Q ss_pred             HHHHHHHHHHhh
Q 023465          270 GQFAVQVYFQIQ  281 (282)
Q Consensus       270 G~~a~q~a~~~~  281 (282)
                      |++++|+|+++.
T Consensus       176 g~~~~~~a~~~G  187 (325)
T cd08264         176 GIFAVQLAKMMG  187 (325)
T ss_pred             HHHHHHHHHHcC
Confidence            999999999763

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.87  E-value=1.9e-21  Score=174.58  Aligned_cols=141  Identities=29%  Similarity=0.456  Sum_probs=121.2

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC-----------CCCCCCcccCCceEEEEEeCCCCCCCCCCCee
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI-----------GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA  206 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  206 (282)
                      ..++|.|.++++||+||+.+ ++|+.|.+...+.+..           ...+|.++|||++|+|+++|++++++++||+|
T Consensus        15 ~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   94 (350)
T cd08240          15 EVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKV   94 (350)
T ss_pred             EEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEE
Confidence            34567788999999999999 9999998776654321           22456889999999999999999999999999


Q ss_pred             EEc----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCC-C
Q 023465          207 AIM----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGP-A  255 (282)
Q Consensus       207 ~~~----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~-~  255 (282)
                      ++.                            ..|+|+||+.++.+.++++|+  ++.+++.+.+.+.|||++++.... +
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~  174 (350)
T cd08240          95 LVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLV  174 (350)
T ss_pred             EECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCC
Confidence            876                            368999999999999999999  678888899999999999966554 6


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|||+|+ |++|++++|+||++
T Consensus       175 ~~~~vlI~g~-g~vg~~~~~~a~~~  198 (350)
T cd08240         175 ADEPVVIIGA-GGLGLMALALLKAL  198 (350)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHc
Confidence            8999999975 99999999999976

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.87  E-value=1.6e-21  Score=174.47  Aligned_cols=141  Identities=23%  Similarity=0.273  Sum_probs=122.3

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ...+++.|.|+++||+||+++ ++|+.|.....+.+  ...+|.++|||++|+|+++|++++.|++||+|+...      
T Consensus        15 ~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~   92 (339)
T cd08249          15 VVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPN   92 (339)
T ss_pred             cccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccCC
Confidence            345677888999999999999 99999987664432  224578999999999999999999999999999875      


Q ss_pred             ---CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCC----------CCCCEEEEeCCCchHHHHHH
Q 023465          211 ---FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGP----------ASGKKVLVTAAAGGTGQFAV  274 (282)
Q Consensus       211 ---~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~----------~~g~~vli~ga~g~vG~~a~  274 (282)
                         +|+|++|++++.+.++++|+  ++.+++.+++++.|||+++. ...+          ++|++|||+|++|++|++++
T Consensus        93 ~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~  172 (339)
T cd08249          93 DPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAI  172 (339)
T ss_pred             CCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHH
Confidence               39999999999999999998  67788889999999999984 3333          78999999999999999999


Q ss_pred             HHHHHh
Q 023465          275 QVYFQI  280 (282)
Q Consensus       275 q~a~~~  280 (282)
                      |+|+++
T Consensus       173 ~~a~~~  178 (339)
T cd08249         173 QLAKLA  178 (339)
T ss_pred             HHHHHc
Confidence            999975

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.86  E-value=4.6e-21  Score=171.51  Aligned_cols=137  Identities=25%  Similarity=0.281  Sum_probs=118.1

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc----------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM----------  209 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------  209 (282)
                      +.+.|.+.+++|+||+++ ++|+.|.....+.+. +..+|.++|+|++|+|+++|++++.|++||+|++.          
T Consensus        16 ~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~   94 (343)
T cd08235          16 EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHY   94 (343)
T ss_pred             EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChH
Confidence            455677889999999999 999999887766542 23457899999999999999999999999999975          


Q ss_pred             ------------------cCCccccEEeecCCC-----eeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC
Q 023465          210 ------------------TFGSYAEFTMVPSKH-----ILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  264 (282)
Q Consensus       210 ------------------~~G~~ae~~~v~~~~-----~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g  264 (282)
                                        ..|+|+||++++.+.     ++++|+  ++.+++.+ +++.|||+++....+++|++|||+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~VlV~g  173 (343)
T cd08235          95 CLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRKAGIKPGDTVLVIG  173 (343)
T ss_pred             HHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHhcCCCCCCEEEEEC
Confidence                              359999999999998     999999  56666544 8899999999777889999999997


Q ss_pred             CCchHHHHHHHHHHHh
Q 023465          265 AAGGTGQFAVQVYFQI  280 (282)
Q Consensus       265 a~g~vG~~a~q~a~~~  280 (282)
                      + |++|++++|+|+++
T Consensus       174 ~-g~vg~~~~~la~~~  188 (343)
T cd08235         174 A-GPIGLLHAMLAKAS  188 (343)
T ss_pred             C-CHHHHHHHHHHHHc
Confidence            4 99999999999975

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.86  E-value=3.1e-21  Score=175.55  Aligned_cols=141  Identities=21%  Similarity=0.233  Sum_probs=118.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC------CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE----
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN------DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~------~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----  208 (282)
                      .+++.|.++++||+||+++ ++|..|.....+..      +....+|.++|||++|+|+++|++++.|++||+|++    
T Consensus        42 ~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  121 (384)
T cd08265          42 EDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMM  121 (384)
T ss_pred             EECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCC
Confidence            4667788999999999999 99999987665210      112356889999999999999999999999999985    


Q ss_pred             -----------------------c-cCCccccEEeecCCCeeeCCCC--------hHHHHHhhhHHHHHHHHH-HH-hCC
Q 023465          209 -----------------------M-TFGSYAEFTMVPSKHILPVARP--------DPEVVAMLTSGLTASIAL-EQ-AGP  254 (282)
Q Consensus       209 -----------------------~-~~G~~ae~~~v~~~~~~~~p~~--------~~~~a~l~~~~~ta~~~l-~~-~~~  254 (282)
                                             . ..|+|+||+.++++.++++|+.        +.++++++.+++|||+++ .. .++
T Consensus       122 ~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~  201 (384)
T cd08265         122 WCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGF  201 (384)
T ss_pred             CCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCC
Confidence                                   2 2699999999999999999972        456788889999999999 34 578


Q ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          255 ASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       255 ~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++|++|||+|+ |++|++++|+|+++.
T Consensus       202 ~~g~~VlV~g~-g~vG~~ai~lA~~~G  227 (384)
T cd08265         202 RPGAYVVVYGA-GPIGLAAIALAKAAG  227 (384)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            99999999975 999999999999863

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.86  E-value=4.1e-21  Score=170.38  Aligned_cols=140  Identities=21%  Similarity=0.376  Sum_probs=121.0

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|.|.++++||+||+++ ++|..|.....+.+.....+|.++|||++|+|++  +++.+|++||+|++..       
T Consensus        16 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~   93 (323)
T TIGR02823        16 VETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSH   93 (323)
T ss_pred             EeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCCCCCC
Confidence            45677888999999999999 9999998877665433345688999999999998  5678899999999874       


Q ss_pred             CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH---HhCCCCCC-EEEEeCCCchHHHHHHHHHHHh
Q 023465          211 FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE---QAGPASGK-KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~---~~~~~~g~-~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .|+|+||+.+|.+.++++|+  ++.+++.++..+.||+++++   +.++++|+ +|+|+|++|++|++++|+|+++
T Consensus        94 ~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~  169 (323)
T TIGR02823        94 DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKL  169 (323)
T ss_pred             CccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHc
Confidence            69999999999999999999  67788889999999988763   34478898 9999999999999999999986

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.86  E-value=5.3e-21  Score=171.18  Aligned_cols=137  Identities=23%  Similarity=0.317  Sum_probs=119.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .+.+.|.++++||+||+.+ ++|+.|.....+.+  ....|.++|+|++|+|+++|++++.|++||+|+..         
T Consensus        15 ~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~   92 (343)
T cd08236          15 EDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCE   92 (343)
T ss_pred             EecCCCCCCCCeEEEEEEEEEECccchHhhcCCC--CCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCh
Confidence            4456677899999999999 99999988766653  23457899999999999999999999999999986         


Q ss_pred             -------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCch
Q 023465          210 -------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG  268 (282)
Q Consensus       210 -------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~  268 (282)
                                         ..|+|++|+.+|++.++++|+  ++.+++.+ .+++|||+++....+++|++|||+|+ |.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~g~-g~  170 (343)
T cd08236          93 YCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVRLAGITLGDTVVVIGA-GT  170 (343)
T ss_pred             hHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHHhcCCCCCCEEEEECC-CH
Confidence                               469999999999999999999  56666665 68899999998778899999999975 99


Q ss_pred             HHHHHHHHHHHh
Q 023465          269 TGQFAVQVYFQI  280 (282)
Q Consensus       269 vG~~a~q~a~~~  280 (282)
                      +|.+++|+|+++
T Consensus       171 ~g~~~~~lA~~~  182 (343)
T cd08236         171 IGLLAIQWLKIL  182 (343)
T ss_pred             HHHHHHHHHHHc
Confidence            999999999975

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.86  E-value=4.5e-21  Score=170.27  Aligned_cols=139  Identities=27%  Similarity=0.454  Sum_probs=116.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------C
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------F  211 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------~  211 (282)
                      .+++.|.+.++||+||+.+ ++|..|.....+.+.....+|.++|||++|+|+++|  +.+|++||+|+...       .
T Consensus        18 ~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~~~~~~~   95 (326)
T cd08289          18 KNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYDLGVSHH   95 (326)
T ss_pred             EEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccccCCCCC
Confidence            4566788899999999999 999999765432222233468899999999999954  57899999999874       6


Q ss_pred             CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH---hCC-CCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          212 GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ---AGP-ASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       212 G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~---~~~-~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|+||+.++++.++++|+  ++.+++.+++++.||++++..   ... ..+++|||+|++|++|++++|+|+++
T Consensus        96 g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (326)
T cd08289          96 GGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL  170 (326)
T ss_pred             CcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence            9999999999999999999  678888899999999988843   333 45789999999999999999999976

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.86  E-value=6.4e-21  Score=169.63  Aligned_cols=138  Identities=25%  Similarity=0.357  Sum_probs=121.5

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc----------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM----------  209 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------  209 (282)
                      +.+.|.+.++||+||+.+ ++|..|.....+.++. ..+|.++|||++|+|+++|+++++|++||+|.+.          
T Consensus        21 ~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~   99 (329)
T cd08298          21 EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECR   99 (329)
T ss_pred             eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCCh
Confidence            445567889999999999 9999998877665332 3568899999999999999999999999999762          


Q ss_pred             -------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCch
Q 023465          210 -------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG  268 (282)
Q Consensus       210 -------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~  268 (282)
                                         ..|+|+||+.++.+.++++|+  ++.+++++++++.|||++++.+++++|++|||+|+ |+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~vlV~g~-g~  178 (329)
T cd08298         100 YCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGF-GA  178 (329)
T ss_pred             hHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHHHhhCCCCCCEEEEECC-cH
Confidence                               258999999999999999999  68889999999999999998888899999999985 99


Q ss_pred             HHHHHHHHHHHh
Q 023465          269 TGQFAVQVYFQI  280 (282)
Q Consensus       269 vG~~a~q~a~~~  280 (282)
                      +|++++|+|+++
T Consensus       179 vg~~~~~la~~~  190 (329)
T cd08298         179 SAHLALQIARYQ  190 (329)
T ss_pred             HHHHHHHHHHHC
Confidence            999999999975

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.86  E-value=4.1e-21  Score=173.45  Aligned_cols=138  Identities=25%  Similarity=0.311  Sum_probs=121.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .+++.|.++++||+||+.+ ++|..|.....+.+.  ..+|.++|||++|+|+++|++++.|++||+|++.         
T Consensus        16 ~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~   93 (363)
T cd08279          16 EEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCR   93 (363)
T ss_pred             EEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCCh
Confidence            4566788899999999999 999999887766532  4567899999999999999999999999999972         


Q ss_pred             ---------------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHH
Q 023465          210 ---------------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIA  248 (282)
Q Consensus       210 ---------------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~  248 (282)
                                                             ..|+|+||+.++.+.++++|+  ++++++.++++..|||++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~  173 (363)
T cd08279          94 YCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGA  173 (363)
T ss_pred             hhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHH
Confidence                                                   358999999999999999999  677888888999999999


Q ss_pred             H-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          249 L-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       249 l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      + +..++++|++|||+|+ |++|++++|+|+++
T Consensus       174 ~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~  205 (363)
T cd08279         174 VVNTARVRPGDTVAVIGC-GGVGLNAIQGARIA  205 (363)
T ss_pred             HHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            8 6677899999999965 99999999999975

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.86  E-value=6.1e-21  Score=169.62  Aligned_cols=140  Identities=24%  Similarity=0.295  Sum_probs=122.1

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae  216 (282)
                      .+++.|.|+++||+||+.+ ++|..|.....+.+. ...+|.++|||++|+|+++|++|+.+++||+|+...  .|+|+|
T Consensus        19 ~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~   97 (327)
T PRK10754         19 VEFTPADPAENEVQVENKAIGINYIDTYIRSGLYP-PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSS   97 (327)
T ss_pred             eeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCC-CCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCCCCcceee
Confidence            4456678899999999999 999999877666542 234678999999999999999999999999998653  599999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+.++.+.++++|+  ++++++.++.+..|||+++ +...+++|++|+|+|++|++|++++|+||++
T Consensus        98 ~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~  164 (327)
T PRK10754         98 VHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL  164 (327)
T ss_pred             EEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHc
Confidence            99999999999999  6778888899999999998 4567799999999999999999999999975

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.86  E-value=7.2e-21  Score=169.64  Aligned_cols=141  Identities=28%  Similarity=0.377  Sum_probs=122.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~~  214 (282)
                      .+++.|.+.++||+||+.+ ++|+.|.....+.+. ..++|.++|||++|+|+++|++++.|++||+|+...    .|+|
T Consensus        21 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~   99 (336)
T cd08252          21 IELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSN   99 (336)
T ss_pred             ccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccc
Confidence            3456677889999999999 999999877655432 234677999999999999999999999999999864    4999


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCC-----CCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPAS-----GKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~-----g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++|+.++.+.++++|+  ++.+++.++....|||+++ +.+.+++     |++|+|+|++|++|++++|+|+++.
T Consensus       100 ~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G  174 (336)
T cd08252         100 AEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLT  174 (336)
T ss_pred             eEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcC
Confidence            9999999999999998  6778888999999999998 6677777     9999999998999999999999864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.86  E-value=6.4e-21  Score=174.29  Aligned_cols=142  Identities=28%  Similarity=0.289  Sum_probs=118.8

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCC---------CCCCCC-CcccCCceEEEEEeCCCCCCCCCCCeeE
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND---------IGSRLP-FDAGFEAVGLIAAVGDSVNNVKVGTPAA  207 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~---------~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  207 (282)
                      ..+++.|.|+++|++||+.+ ++|..|.+...+...         .+...| .++|||++|+|+++|++++.|++||+|+
T Consensus        27 ~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~  106 (398)
T TIGR01751        27 LEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVV  106 (398)
T ss_pred             EeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEE
Confidence            34667788899999999999 999877654433210         001223 3899999999999999999999999998


Q ss_pred             Ecc-----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH---hC
Q 023465          208 IMT-----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ---AG  253 (282)
Q Consensus       208 ~~~-----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~---~~  253 (282)
                      +..                             .|+|+||+.++.+.++++|+  ++++++.+..++.|||+++..   ..
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~  186 (398)
T TIGR01751       107 ASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAT  186 (398)
T ss_pred             EccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccC
Confidence            753                             48999999999999999999  677888889999999999853   66


Q ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          254 PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       254 ~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++|+|+|++|++|++++|+|+++
T Consensus       187 ~~~g~~vlV~Ga~g~vG~~ai~~ak~~  213 (398)
T TIGR01751       187 VKPGDNVLIWGAAGGLGSYATQLARAG  213 (398)
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence            799999999999999999999999975

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.86  E-value=1e-20  Score=168.94  Aligned_cols=138  Identities=25%  Similarity=0.316  Sum_probs=118.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++++|.+.++|++|||.+ ++|+.|.....+.+.. ..+|.++|+|++|+|+++|++++.|++||+|+..        
T Consensus        14 ~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~   92 (337)
T cd08261          14 VVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF-ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGEC   92 (337)
T ss_pred             EEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc-CCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCC
Confidence            45667788999999999999 9999998877665432 2457899999999999999999999999999862        


Q ss_pred             --------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          210 --------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       210 --------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                          ..|+|++|+.++++ ++++|+  ++++++.+ .++++++++++...+++|++|||+|+ |
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~~~~~l~~g~~vLI~g~-g  169 (337)
T cd08261          93 YACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAVRRAGVTAGDTVLVVGA-G  169 (337)
T ss_pred             hhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHHHhcCCCCCCEEEEECC-C
Confidence                                26999999999999 999999  56666655 67888998887788899999999975 9


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|.+++|+|+++
T Consensus       170 ~vG~~a~~lA~~~  182 (337)
T cd08261         170 PIGLGVIQVAKAR  182 (337)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=9.9e-21  Score=166.87  Aligned_cols=140  Identities=22%  Similarity=0.186  Sum_probs=119.2

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccc-cCCCCC-CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccc
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYF-SDGNDI-GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYA  215 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~-~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~a  215 (282)
                      ..+++.|.+.++||+||+.+ ++|..|.... .+.... ....|.++|||++|+|+++|++++++++||+|+....|+|+
T Consensus         9 ~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~   88 (312)
T cd08269           9 VEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSGGAFA   88 (312)
T ss_pred             EEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecCCcce
Confidence            34566788999999999999 9999997765 443211 12347899999999999999999999999999998889999


Q ss_pred             cEEeecCCCeeeCCCChHHHHHhh-hHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          216 EFTMVPSKHILPVARPDPEVVAML-TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       216 e~~~v~~~~~~~~p~~~~~~a~l~-~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+.++++.++++|+.. ..++++ .+++|++++++...+++|++|+|+|+ |++|++++|+|+++
T Consensus        89 ~~~~v~~~~~~~lP~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~la~~~  152 (312)
T cd08269          89 EYDLADADHAVPLPSLL-DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGA-GFIGLLFLQLAAAA  152 (312)
T ss_pred             eeEEEchhheEECCCch-hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            99999999999999954 334454 88999999998888899999999974 99999999999976

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=7.5e-21  Score=171.97  Aligned_cols=138  Identities=28%  Similarity=0.361  Sum_probs=121.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCC---CCCCCeeEEc------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN---VKVGTPAAIM------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~------  209 (282)
                      .+.+.|.++++||+||+.+ ++|+.|.....+.+  +..+|.++|||++|+|+++|+++.+   |++||+|++.      
T Consensus        16 ~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~--~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~   93 (367)
T cd08263          16 EEIPVPRPKEGEILIRVAACGVCHSDLHVLKGEL--PFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCG   93 (367)
T ss_pred             EEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCC--CCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCC
Confidence            4556678899999999999 99999988776654  2367889999999999999999988   9999999872      


Q ss_pred             --------------------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHH
Q 023465          210 --------------------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGL  243 (282)
Q Consensus       210 --------------------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~  243 (282)
                                                                  ..|+|+||+.++.+.++++|+  ++.++++++.+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~  173 (367)
T cd08263          94 KCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGF  173 (367)
T ss_pred             CChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHH
Confidence                                                        258999999999999999999  7889999999999


Q ss_pred             HHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          244 TASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       244 ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |||+++.. ..+++|++|||+| +|++|++++|+|+++
T Consensus       174 tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~  210 (367)
T cd08263         174 TAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF  210 (367)
T ss_pred             HHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc
Confidence            99999944 5568999999996 599999999999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.85  E-value=9.9e-21  Score=167.90  Aligned_cols=141  Identities=23%  Similarity=0.344  Sum_probs=119.7

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|.|.|+++||+||+.+ ++|+.|.....+.+.....+|.++|||++|+|++  ++++++++||+|++..       
T Consensus        17 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~   94 (324)
T cd08288          17 LRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERH   94 (324)
T ss_pred             EEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCccCCCCC
Confidence            34667788999999999999 9999998876665322234688899999999999  7788899999999863       


Q ss_pred             CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH---HhCCC-CCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          211 FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE---QAGPA-SGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~---~~~~~-~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      .|+|+||++++.+.++++|+  ++++++.++.+++|++.++.   ..+.. +|++|||+|++|++|++++|+|+++.
T Consensus        95 ~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G  171 (324)
T cd08288          95 WGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLG  171 (324)
T ss_pred             CCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCC
Confidence            69999999999999999999  67888889999999987764   45565 67899999999999999999999863

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.85  E-value=8.5e-21  Score=170.06  Aligned_cols=140  Identities=18%  Similarity=0.157  Sum_probs=120.6

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      .+++.|+| .++||+||+.+ ++|..|.....+.+. ...+|.++|||++|+|+++|++++++++||+|++..       
T Consensus        15 ~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~   93 (345)
T cd08286          15 EDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVP-TVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTC   93 (345)
T ss_pred             EecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCC-CCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCC
Confidence            35566775 78999999999 999999888776543 234588999999999999999999999999998743       


Q ss_pred             ----------------------CCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEe
Q 023465          211 ----------------------FGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVT  263 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~  263 (282)
                                            .|+|+||+.++.+  .++++|+  +..+++.++++++|||+++ +...+++|++|||.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~  173 (345)
T cd08286          94 GYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIV  173 (345)
T ss_pred             hHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEE
Confidence                                  2899999999987  8999998  6778888999999999976 66778999999998


Q ss_pred             CCCchHHHHHHHHHHHhh
Q 023465          264 AAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       264 ga~g~vG~~a~q~a~~~~  281 (282)
                      |+ |++|++++|+||++.
T Consensus       174 g~-g~~g~~~~~~a~~~G  190 (345)
T cd08286         174 GA-GPVGLAALLTAQLYS  190 (345)
T ss_pred             CC-CHHHHHHHHHHHHcC
Confidence            86 999999999999763

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=1.1e-20  Score=166.79  Aligned_cols=140  Identities=25%  Similarity=0.265  Sum_probs=120.0

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ...+++.|.+.++||+||+.+ ++|+.|.+...+.+. ....|.++|+|++|+|+++|++++.|++||+|++..      
T Consensus        15 ~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   93 (306)
T cd08258          15 ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCG   93 (306)
T ss_pred             EEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCC
Confidence            345667788999999999999 999999877665531 234578999999999999999999999999999864      


Q ss_pred             -----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeC
Q 023465          211 -----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTA  264 (282)
Q Consensus       211 -----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~g  264 (282)
                                             .|+|+||++++.+.++++|+  ++.++ +++.+.++||+++ ..+.+++|++|||.|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a-a~~~~~~~a~~~l~~~~~~~~g~~vlI~g  172 (306)
T cd08258          94 RCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAA-ALTEPLAVAVHAVAERSGIRPGDTVVVFG  172 (306)
T ss_pred             CCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHH-HhhchHHHHHHHHHHhcCCCCCCEEEEEC
Confidence                                   38999999999999999999  45554 4888999999998 667789999999987


Q ss_pred             CCchHHHHHHHHHHHh
Q 023465          265 AAGGTGQFAVQVYFQI  280 (282)
Q Consensus       265 a~g~vG~~a~q~a~~~  280 (282)
                       +|++|++++|+|+++
T Consensus       173 -~g~~g~~~~~la~~~  187 (306)
T cd08258         173 -PGPIGLLAAQVAKLQ  187 (306)
T ss_pred             -CCHHHHHHHHHHHHc
Confidence             599999999999986

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.85  E-value=1.4e-20  Score=167.77  Aligned_cols=140  Identities=29%  Similarity=0.412  Sum_probs=121.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE----------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----------  208 (282)
                      .+.+.|.++++||+|++.+ ++|..|.....+.+.....+|.++|+|++|+|+++|+++..|++||+|+.          
T Consensus        17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~   96 (338)
T cd08254          17 EEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACA   96 (338)
T ss_pred             eccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCCh
Confidence            3456678899999999999 99999988877665434456789999999999999999999999999986          


Q ss_pred             --------cc----------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCc
Q 023465          209 --------MT----------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAG  267 (282)
Q Consensus       209 --------~~----------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g  267 (282)
                              .+          .|+|++|+.++.+.++++|+  ++.++++++.+++|||+++. ...++++++|||.|+ |
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~-g  175 (338)
T cd08254          97 LCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGL-G  175 (338)
T ss_pred             hhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-c
Confidence                    11          48999999999999999999  67888889999999999984 455799999999865 9


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+.+
T Consensus       176 ~vG~~~~~la~~~  188 (338)
T cd08254         176 GLGLNAVQIAKAM  188 (338)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999975

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.85  E-value=1.5e-20  Score=168.48  Aligned_cols=139  Identities=24%  Similarity=0.298  Sum_probs=116.5

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCC-C-CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDG-N-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~-~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~--------  208 (282)
                      .+.+.|.+.++||+|||.+ ++|+.|.....+. . .....+|.++|+|++|+|+++|+++++|++||+|++        
T Consensus        13 ~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   92 (343)
T cd05285          13 EERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRT   92 (343)
T ss_pred             EECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCC
Confidence            4566788899999999999 9999997764321 1 112245788999999999999999999999999986        


Q ss_pred             ----------------c-----cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          209 ----------------M-----TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       209 ----------------~-----~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                      .     ..|+|+||++++.+.++++|+  ++.+++.+ .++.+|+++++.+.+++|++|||+|+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~~~~~~~g~~vlI~g~  171 (343)
T cd05285          93 CEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACRRAGVRPGDTVLVFGA  171 (343)
T ss_pred             ChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHHhcCCCCCCEEEEECC
Confidence                            1     258999999999999999999  56666554 68899999998888999999999876


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+||++
T Consensus       172 -g~vG~~a~~lak~~  185 (343)
T cd05285         172 -GPIGLLTAAVAKAF  185 (343)
T ss_pred             -CHHHHHHHHHHHHc
Confidence             99999999999975

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.85  E-value=1.5e-20  Score=168.07  Aligned_cols=139  Identities=25%  Similarity=0.337  Sum_probs=114.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-ccccccccccc-CCC-CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFS-DGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~-~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .+.++|.++++||+||+.+ ++|+.|..... +.+ .....+|.++|||++|+|+++|++|++|++||+|++.       
T Consensus        12 ~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~   91 (339)
T cd08232          12 EERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGT   91 (339)
T ss_pred             EEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCC
Confidence            4456788999999999999 99999876543 221 1122457899999999999999999999999999862       


Q ss_pred             --------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEE
Q 023465          210 --------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVL  261 (282)
Q Consensus       210 --------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vl  261 (282)
                                                ..|+|+||++++.+.++++|+  ++.++ +++.+++|||+++.+....+|++||
T Consensus        92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~a-a~~~~~~~a~~~l~~~~~~~~~~VL  170 (339)
T cd08232          92 CDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRA-ALAEPLAVALHAVNRAGDLAGKRVL  170 (339)
T ss_pred             ChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHh-hhcchHHHHHHHHHhcCCCCCCEEE
Confidence                                      248999999999999999999  45555 4578899999999666555999999


Q ss_pred             EeCCCchHHHHHHHHHHHh
Q 023465          262 VTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       262 i~ga~g~vG~~a~q~a~~~  280 (282)
                      |.|+ |++|++++|+|+++
T Consensus       171 I~g~-g~vG~~~~~lak~~  188 (339)
T cd08232         171 VTGA-GPIGALVVAAARRA  188 (339)
T ss_pred             EECC-CHHHHHHHHHHHHc
Confidence            9885 99999999999975

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.85  E-value=2.1e-20  Score=164.82  Aligned_cols=140  Identities=29%  Similarity=0.386  Sum_probs=124.2

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------CCc
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------FGS  213 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------~G~  213 (282)
                      +++.|.+.++|++|++.+ ++|..|.....+.+......|.++|||++|+|+++|+++++|++||+|+...      .|+
T Consensus        19 ~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~   98 (325)
T cd08253          19 DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGT   98 (325)
T ss_pred             ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcc
Confidence            455677889999999999 9999998776665433345788999999999999999999999999999876      799


Q ss_pred             cccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++|+.++.+.++++|+  +..+++.+++++.+||+++. ...+++|++|+|+|++|++|++++++++++
T Consensus        99 ~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~  168 (325)
T cd08253          99 AAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWA  168 (325)
T ss_pred             eeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHc
Confidence            99999999999999999  67788899999999999994 478899999999999999999999999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.85  E-value=1.9e-20  Score=169.15  Aligned_cols=139  Identities=20%  Similarity=0.219  Sum_probs=114.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .+++.|.|+++||+||+.+ ++|+.|..+..+..  .....+|.++|||++|+|+++|+++++|++||+|++.       
T Consensus        32 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~  111 (364)
T PLN02702         32 QPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWR  111 (364)
T ss_pred             EeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCC
Confidence            3455677899999999999 99999988765421  1122457899999999999999999999999999862       


Q ss_pred             ------------------c----CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ------------------T----FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ------------------~----~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                        .    .|+|+||+.++.+.++++|+  ++.+++ +..++.+++++++..++++|++|||+|+
T Consensus       112 c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~~~~~~~~~~g~~vlI~g~  190 (364)
T PLN02702        112 CNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGA-MCEPLSVGVHACRRANIGPETNVLVMGA  190 (364)
T ss_pred             CcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHh-hhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence                              1    58999999999999999999  455554 3456667888887788899999999975


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+|+++
T Consensus       191 -g~vG~~~~~~a~~~  204 (364)
T PLN02702        191 -GPIGLVTMLAARAF  204 (364)
T ss_pred             -CHHHHHHHHHHHHc
Confidence             99999999999975

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.85  E-value=1.3e-20  Score=166.29  Aligned_cols=137  Identities=22%  Similarity=0.265  Sum_probs=118.8

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC-------C
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-------G  212 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-------G  212 (282)
                      +.+.|.++++||+||+++ ++|+.|.....+.+. ....|.++|||++|+|+++|+  ..+++||+|++...       |
T Consensus        19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g   95 (320)
T cd08243          19 EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP-SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDG   95 (320)
T ss_pred             ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCc
Confidence            344456889999999999 999999877665432 235578999999999999995  67999999998753       8


Q ss_pred             ccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          213 SYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       213 ~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+.++...++++|+  ++.+++++++++.|||+++.. ..+++|++|||+|++|++|++++|+|+++
T Consensus        96 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~  166 (320)
T cd08243          96 SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKAL  166 (320)
T ss_pred             ccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHc
Confidence            999999999999999999  678899999999999999954 56799999999999999999999999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=1.8e-20  Score=167.96  Aligned_cols=139  Identities=24%  Similarity=0.273  Sum_probs=120.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE----------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----------  208 (282)
                      .+.+.|.+.++||+||+.+ ++|+.|.....+... ...+|.++|||++|+|+++|++++.|++||+|++          
T Consensus        16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~   94 (345)
T cd08260          16 REVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP-DVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCP   94 (345)
T ss_pred             EEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCC-CCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCc
Confidence            3456678899999999999 999999887766533 2356889999999999999999999999999986          


Q ss_pred             -----------------c-cCCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCC
Q 023465          209 -----------------M-TFGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAA  265 (282)
Q Consensus       209 -----------------~-~~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga  265 (282)
                                       . ..|+|++|+++++.  .++++|+  ++.+++.++.++.|||+++ +..+++++++|+|+| 
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-  173 (345)
T cd08260          95 YCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG-  173 (345)
T ss_pred             cccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEEC-
Confidence                             2 26999999999985  8999999  6778888889999999998 567789999999999 


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                      +|++|++++|+|+++
T Consensus       174 ~g~vg~~~~~~a~~~  188 (345)
T cd08260         174 CGGVGLSAVMIASAL  188 (345)
T ss_pred             CCHHHHHHHHHHHHc
Confidence            599999999999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.85  E-value=2.1e-20  Score=166.60  Aligned_cols=138  Identities=25%  Similarity=0.316  Sum_probs=119.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE---------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI---------  208 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~---------  208 (282)
                      ..+.+.|.++++||+||+++ ++|+.|.....+.+.  ..+|.++|+|++|+|+++|+++++|++||+|+.         
T Consensus        14 ~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~--~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~   91 (334)
T cd08234          14 VEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG--AAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGEC   91 (334)
T ss_pred             EEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC--CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCC
Confidence            44566788999999999999 999999888776543  247889999999999999999999999999987         


Q ss_pred             ----------------c---cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          209 ----------------M---TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       209 ----------------~---~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                      .   ..|+|+||+.++.+.++++|+  ++.+++.+ .++.+++++++.+.+++|++|||+|+ |
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~g~-g  169 (334)
T cd08234          92 FYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGLDLLGIKPGDSVLVFGA-G  169 (334)
T ss_pred             ccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHHHhcCCCCCCEEEEECC-C
Confidence                            1   358999999999999999999  55666544 78889999997788899999999985 9


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+++
T Consensus       170 ~vg~~~~~la~~~  182 (334)
T cd08234         170 PIGLLLAQLLKLN  182 (334)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.84  E-value=8.6e-21  Score=168.82  Aligned_cols=144  Identities=26%  Similarity=0.299  Sum_probs=120.7

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCC---CCCCcccCCceEE---EEEeC-CCCCCCCCCCeeEEc
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGS---RLPFDAGFEAVGL---IAAVG-DSVNNVKVGTPAAIM  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~---~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~~  209 (282)
                      ...+.++|.|.+++++|++.+ .+|+.|+++..+.+....   .+|.+++.++.|+   +..+| ..+..+..||++...
T Consensus        21 ~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~  100 (347)
T KOG1198|consen   21 FSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAF  100 (347)
T ss_pred             EeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeec
Confidence            345677899999999999999 889999999888876666   7886666666655   44445 344567788777665


Q ss_pred             c-CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHh------CCCCCCEEEEeCCCchHHHHHHHHHHH
Q 023465          210 T-FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQA------GPASGKKVLVTAAAGGTGQFAVQVYFQ  279 (282)
Q Consensus       210 ~-~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~------~~~~g~~vli~ga~g~vG~~a~q~a~~  279 (282)
                      . .|+|+||+++|...++++|+  ++.++|+++.++.|||.+| +..      +.++|++|||+||+|+||++++|+|++
T Consensus       101 ~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~  180 (347)
T KOG1198|consen  101 LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKH  180 (347)
T ss_pred             cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHh
Confidence            4 69999999999999999999  8999999999999999999 555      589999999999999999999999998


Q ss_pred             hh
Q 023465          280 IQ  281 (282)
Q Consensus       280 ~~  281 (282)
                      .+
T Consensus       181 ~~  182 (347)
T KOG1198|consen  181 AG  182 (347)
T ss_pred             cC
Confidence            64

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.84  E-value=2.9e-20  Score=160.03  Aligned_cols=129  Identities=29%  Similarity=0.408  Sum_probs=114.2

Q ss_pred             cEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------------------
Q 023465          151 EKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------------------  210 (282)
Q Consensus       151 ~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------  210 (282)
                      ||+|+|.+ ++|+.|.+...+.+.....+|.++|||++|+|+++|++++.|++||+|+...                   
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            68999999 9999998887765432345688999999999999999999999999999875                   


Q ss_pred             -----CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCC-CCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          211 -----FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 -----~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~-~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                           .|+|+||+.++.+.++++|+  ++.+++.+++++.|||+++..... ++|++|||+|+++ +|++++|+++++
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~  157 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA  157 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc
Confidence                 69999999999999999999  678888888999999999966555 8999999999965 999999999975

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.84  E-value=3.6e-20  Score=165.91  Aligned_cols=139  Identities=24%  Similarity=0.275  Sum_probs=115.0

Q ss_pred             CccccCCCC-CCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE-cc-----
Q 023465          139 PLNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-MT-----  210 (282)
Q Consensus       139 ~~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~-----  210 (282)
                      ..+.|+|.| +++||+||+.+ ++|++|.....+.+.  ...|.++|||++|+|+++|+++..+++||+|++ ..     
T Consensus        14 ~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   91 (345)
T cd08287          14 VEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP--TRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGT   91 (345)
T ss_pred             EEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC--CCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCC
Confidence            345667876 89999999999 999999887766532  345889999999999999999999999999987 21     


Q ss_pred             ----------------------CCccccEEeecCC--CeeeCCC--ChHH-----HHHhhhHHHHHHHHHHHhCCCCCCE
Q 023465          211 ----------------------FGSYAEFTMVPSK--HILPVAR--PDPE-----VVAMLTSGLTASIALEQAGPASGKK  259 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~--~~~~~p~--~~~~-----~a~l~~~~~ta~~~l~~~~~~~g~~  259 (282)
                                            .|+|+||+.+|.+  .++++|+  +++.     .+++.+.+.|||++++.+.+++|++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~  171 (345)
T cd08287          92 CPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGST  171 (345)
T ss_pred             ChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCE
Confidence                                  2899999999975  8999999  3311     1133467899999998788899999


Q ss_pred             EEEeCCCchHHHHHHHHHHHh
Q 023465          260 VLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       260 vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|.| +|++|++++|+|+++
T Consensus       172 vlI~g-~g~vg~~~~~lak~~  191 (345)
T cd08287         172 VVVVG-DGAVGLCAVLAAKRL  191 (345)
T ss_pred             EEEEC-CCHHHHHHHHHHHHc
Confidence            99987 499999999999975

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.84  E-value=3e-20  Score=165.41  Aligned_cols=139  Identities=30%  Similarity=0.424  Sum_probs=121.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .+.+.|.+.++|++|++.+ ++|..|.....+.+. ...+|.++|||++|+|+++|+++++|++||+|++.         
T Consensus        15 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~   93 (330)
T cd08245          15 EEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRC   93 (330)
T ss_pred             EeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC-CCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCC
Confidence            3556677889999999999 999999887766542 33568899999999999999999999999999842         


Q ss_pred             --------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          210 --------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       210 --------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                          ..|+|++|+.++.++++++|+  ++.+++.+.+.+.|||++++...+++|++|||+|+ |
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~vlI~g~-g  172 (330)
T cd08245          94 EYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVLGI-G  172 (330)
T ss_pred             hhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhhCCCCCCEEEEECC-C
Confidence                                258999999999999999998  67788889999999999997788899999999976 8


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++++|+++
T Consensus       173 ~iG~~~~~~a~~~  185 (330)
T cd08245         173 GLGHLAVQYARAM  185 (330)
T ss_pred             HHHHHHHHHHHHC
Confidence            8999999999975

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.84  E-value=4.7e-20  Score=164.06  Aligned_cols=139  Identities=31%  Similarity=0.361  Sum_probs=121.3

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-----------
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----------  209 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------  209 (282)
                      .+.|.+.++||+|++.+ ++|..|.+...+.......+|.++|||++|+|+++|+++.+|++||+|++.           
T Consensus        20 ~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~   99 (342)
T cd08266          20 LPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYC   99 (342)
T ss_pred             cCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhh
Confidence            34456789999999999 999999887766543334568899999999999999999999999999986           


Q ss_pred             -----------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchH
Q 023465          210 -----------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGT  269 (282)
Q Consensus       210 -----------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~v  269 (282)
                                       ..|+|++|+.++.+.++++|+  ++.+++.++.++.+||+++ +...++++++|+|+|+++++
T Consensus       100 ~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~i  179 (342)
T cd08266         100 LAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGV  179 (342)
T ss_pred             ccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchH
Confidence                             358899999999999999998  6778888889999999998 66778999999999998899


Q ss_pred             HHHHHHHHHHh
Q 023465          270 GQFAVQVYFQI  280 (282)
Q Consensus       270 G~~a~q~a~~~  280 (282)
                      |++++++++++
T Consensus       180 G~~~~~~~~~~  190 (342)
T cd08266         180 GSAAIQIAKLF  190 (342)
T ss_pred             HHHHHHHHHHc
Confidence            99999999875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.84  E-value=3e-20  Score=163.61  Aligned_cols=139  Identities=27%  Similarity=0.314  Sum_probs=122.1

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEEe
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTM  219 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~~  219 (282)
                      .+.|.+.++|++||+.+ ++|..|.....+.+.....+|.++|||++|+|+++|+++..+++||+|+... +|+|++|+.
T Consensus        20 ~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~   99 (323)
T cd05276          20 VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVV   99 (323)
T ss_pred             cCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEE
Confidence            34456789999999999 9999998776665443445688999999999999999999999999999875 499999999


Q ss_pred             ecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          220 VPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       220 v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++.+.++++|+  ++.+++.+..++.++|+++ +...+.++++|+|+|++|++|++++++++++
T Consensus       100 ~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~  163 (323)
T cd05276         100 VPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKAL  163 (323)
T ss_pred             cCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHc
Confidence            99999999999  6778889999999999998 4567799999999999999999999999975

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.84  E-value=4.6e-20  Score=165.09  Aligned_cols=140  Identities=27%  Similarity=0.363  Sum_probs=115.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .+++.|.|+++|++|||.+ ++|+.|.....+..  ....++|.++|||++|+|+++|+++++|++||+|+..       
T Consensus        14 ~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   93 (340)
T TIGR00692        14 TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGK   93 (340)
T ss_pred             EECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCC
Confidence            4566788899999999999 99999977644321  1123457789999999999999999999999999872       


Q ss_pred             ---------------------cCCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          210 ---------------------TFGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                           ..|+|+||++++++.++++|+ .+.+.++++.++.+|++++ ....++|++|+|.|+ |
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vlI~~~-g  171 (340)
T TIGR00692        94 CYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVLVTGA-G  171 (340)
T ss_pred             ChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEEEECC-C
Confidence                                 358999999999999999999 3335667888999999987 334689999999875 9


Q ss_pred             hHHHHHHHHHHHhh
Q 023465          268 GTGQFAVQVYFQIQ  281 (282)
Q Consensus       268 ~vG~~a~q~a~~~~  281 (282)
                      ++|.+++|+|+++.
T Consensus       172 ~vg~~a~~la~~~G  185 (340)
T TIGR00692       172 PIGLMAIAVAKASG  185 (340)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999999763

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.84  E-value=2.8e-20  Score=162.27  Aligned_cols=99  Identities=30%  Similarity=0.400  Sum_probs=89.8

Q ss_pred             cccCCceEEEEEeCCCCC------CCCCCCeeEEcc-----------------------------------CCccccEEe
Q 023465          181 DAGFEAVGLIAAVGDSVN------NVKVGTPAAIMT-----------------------------------FGSYAEFTM  219 (282)
Q Consensus       181 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~-----------------------------------~G~~ae~~~  219 (282)
                      ++|||++|+|+++|++|+      +|++||||.+.+                                   +|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      999999997631                                   389999999


Q ss_pred             ecCC-CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          220 VPSK-HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       220 v~~~-~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++ .++++|+  ++++++.+.+.+.|+|+++++....+|++|||+|+ |++|++++|+||++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~  143 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGA-GMLGLTAAAAAAAA  143 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9997 6999999  67788888899999999998877789999999997 99999999999975

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.84  E-value=6.4e-20  Score=161.85  Aligned_cols=141  Identities=29%  Similarity=0.405  Sum_probs=122.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCC--CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CC
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI--GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FG  212 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G  212 (282)
                      .+.+.|.++++||+|++.+ ++|..|.....+.+..  ....|.++|||++|+|+++|++++++++||+|+...    .|
T Consensus        17 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g   96 (319)
T cd08267          17 VEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGG   96 (319)
T ss_pred             ccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCc
Confidence            3456677899999999999 9999988776554311  224577899999999999999999999999999876    49


Q ss_pred             ccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhC-CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          213 SYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       213 ~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~-~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+.++.+.++++|+  ++.+++.+++++.+||++++... +++|++|+|+|++|++|++++++|+.+
T Consensus        97 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~  167 (319)
T cd08267          97 ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKAL  167 (319)
T ss_pred             eeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence            999999999999999999  67788899999999999995554 799999999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=6.3e-20  Score=163.14  Aligned_cols=139  Identities=33%  Similarity=0.415  Sum_probs=121.7

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC-CccccEEe
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-GSYAEFTM  219 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-G~~ae~~~  219 (282)
                      .+.|.|.++|++||+.+ ++|..|.....+.+......|.++|||++|+|+.+|+++.+|++||+|+.... |+|++|+.
T Consensus        19 ~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~   98 (337)
T cd08275          19 EALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVN   98 (337)
T ss_pred             cCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEE
Confidence            34456789999999999 99999887766543323355789999999999999999999999999999854 99999999


Q ss_pred             ecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          220 VPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       220 v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++.+.++++|+  ++.+++.+..+..++|+++ +...+++|++|+|+|++|++|++++|+|+++
T Consensus        99 ~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~  162 (337)
T cd08275          99 VPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV  162 (337)
T ss_pred             ecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc
Confidence            99999999999  6778888899999999998 5677899999999999999999999999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=5.9e-20  Score=163.34  Aligned_cols=139  Identities=24%  Similarity=0.282  Sum_probs=121.4

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc---------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT---------  210 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------  210 (282)
                      +.+.|.++++|++|++.+ ++|+.|.....+.+......|.++|||++|+|+++|+++.+|++||+|++..         
T Consensus        19 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~   98 (336)
T cd08276          19 EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP   98 (336)
T ss_pred             eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccc
Confidence            344566889999999999 9999998877665443445788999999999999999999999999999875         


Q ss_pred             -------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHH
Q 023465          211 -------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAV  274 (282)
Q Consensus       211 -------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~  274 (282)
                                   .|+|++|+.++.+.++++|+  ++.+++.++.++.+||+++ +...+++|++|+|+| +|++|++++
T Consensus        99 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~  177 (336)
T cd08276          99 TAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFAL  177 (336)
T ss_pred             cccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHH
Confidence                         58999999999999999999  6778888999999999998 456789999999996 599999999


Q ss_pred             HHHHHh
Q 023465          275 QVYFQI  280 (282)
Q Consensus       275 q~a~~~  280 (282)
                      ++|+++
T Consensus       178 ~~a~~~  183 (336)
T cd08276         178 QFAKAA  183 (336)
T ss_pred             HHHHHc
Confidence            999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=6.6e-20  Score=162.49  Aligned_cols=135  Identities=23%  Similarity=0.218  Sum_probs=112.4

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ...+++.|.++++||+||+++ ++|+.|.....+.+    +.|.++|||++|+|+++|++   +++||||...       
T Consensus        13 ~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~----~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~   85 (319)
T cd08242          13 RVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY----PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGR   85 (319)
T ss_pred             EEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC----CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCC
Confidence            345667788999999999999 99999988776643    36889999999999999987   6899999731       


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                            ..|+|+||++++.++++++|+  +.++++. ..+..++|++++..++++|++|||+| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~-~~~~~~~~~~~~~~~~~~g~~vlV~g-  163 (319)
T cd08242          86 CEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVF-AEPLAAALEILEQVPITPGDKVAVLG-  163 (319)
T ss_pred             ChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhh-hhHHHHHHHHHHhcCCCCCCEEEEEC-
Confidence                                  258999999999999999999  4445443 35666788777888889999999997 


Q ss_pred             CchHHHHHHHHHHHhh
Q 023465          266 AGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~~  281 (282)
                      +|++|++++|+|+++.
T Consensus       164 ~g~vg~~~~q~a~~~G  179 (319)
T cd08242         164 DGKLGLLIAQVLALTG  179 (319)
T ss_pred             CCHHHHHHHHHHHHcC
Confidence            5999999999999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=1.2e-19  Score=160.38  Aligned_cols=140  Identities=31%  Similarity=0.419  Sum_probs=121.6

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC------Cc
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------GS  213 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------G~  213 (282)
                      +.+.|.+++++++|+|.+ ++|..|.....+.+.....+|.++|||++|+|+.+|+++.+|++||+|.....      |+
T Consensus        19 ~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~   98 (328)
T cd08268          19 ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGT   98 (328)
T ss_pred             ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccccCCCcc
Confidence            334456889999999999 99999987766554333355789999999999999999999999999998743      89


Q ss_pred             cccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++|+.++.+.++++|+  +..+++.++.++.|+|+++ +...++++++|+|+|++|++|+++++++++.
T Consensus        99 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~  168 (328)
T cd08268          99 YAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAA  168 (328)
T ss_pred             ceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence            99999999999999999  6778888999999999998 5567789999999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.83  E-value=8.8e-20  Score=163.29  Aligned_cols=140  Identities=21%  Similarity=0.269  Sum_probs=113.9

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-----
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----  209 (282)
                      ...++|.|.|+++||+||+++ ++|+.|..+..+..  .....+|.++|||++|+|+++|+++++|++||+|+..     
T Consensus        14 ~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   93 (341)
T PRK05396         14 WLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVC   93 (341)
T ss_pred             EEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCC
Confidence            345667788999999999999 99999987654321  1123467899999999999999999999999999975     


Q ss_pred             -----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC
Q 023465          210 -----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  264 (282)
Q Consensus       210 -----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g  264 (282)
                                             .+|+|+||+.++.+.++++|+  ++.+++ +..++.++++++.. ..++|++|+|+|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~-~~~~~~~~~~~~~~-~~~~g~~vlV~~  171 (341)
T PRK05396         94 GHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAA-IFDPFGNAVHTALS-FDLVGEDVLITG  171 (341)
T ss_pred             CCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhH-hhhHHHHHHHHHHc-CCCCCCeEEEEC
Confidence                                   359999999999999999999  455554 55777777776643 346899999988


Q ss_pred             CCchHHHHHHHHHHHh
Q 023465          265 AAGGTGQFAVQVYFQI  280 (282)
Q Consensus       265 a~g~vG~~a~q~a~~~  280 (282)
                      + |++|++++|+|+++
T Consensus       172 ~-g~vg~~~~~la~~~  186 (341)
T PRK05396        172 A-GPIGIMAAAVAKHV  186 (341)
T ss_pred             C-CHHHHHHHHHHHHc
Confidence            5 99999999999975

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=9.5e-20  Score=161.00  Aligned_cols=139  Identities=27%  Similarity=0.348  Sum_probs=121.6

Q ss_pred             ccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------CCcc
Q 023465          142 LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------FGSY  214 (282)
Q Consensus       142 ~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------~G~~  214 (282)
                      .+.|.+.++||+|++.+ ++|..|.....+........|.++|||++|+|+++|+++.+|++||+|+...      .|+|
T Consensus        20 ~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~   99 (326)
T cd08272          20 VPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSL   99 (326)
T ss_pred             cCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCce
Confidence            34456789999999999 9999998776554332334578999999999999999999999999999875      6899


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|+.++.+.++++|+  ++.+++.++..+.+||+++ +...+++|++|+|+|++|++|++++++|+.+
T Consensus       100 ~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~  168 (326)
T cd08272         100 AEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAA  168 (326)
T ss_pred             eEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHc
Confidence            9999999999999999  6778888899999999998 6678899999999999999999999999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.82  E-value=1.3e-19  Score=156.96  Aligned_cols=128  Identities=27%  Similarity=0.304  Sum_probs=115.6

Q ss_pred             CcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEeecCCCeeeC
Q 023465          150 FEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV  228 (282)
Q Consensus       150 ~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~  228 (282)
                      +||+||+.+ ++|+.|.+...+.+   ..+|.++|||++|+|+++|+++++|++||+|++...|+|+||+.++.+.++++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~   77 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKI   77 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeC
Confidence            589999999 99999988776543   24578999999999999999999999999999988899999999999999999


Q ss_pred             CC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          229 AR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       229 p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+  ++.+++.++++..|+|+++ +...+++|++|+|+|++|++|++++|+|+.+
T Consensus        78 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~  132 (293)
T cd05195          78 PDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL  132 (293)
T ss_pred             CCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence            98  6778888889999999998 5577899999999999999999999999975

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd05281 TDH Threonine dehydrogenase

Probab=99.82  E-value=2.2e-19  Score=160.81  Aligned_cols=140  Identities=26%  Similarity=0.342  Sum_probs=116.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------  209 (282)
                      ..+.+.|.|+++|++||+.+ ++|+.|.....+..  .....+|.++|||++|+|+.+|++++.|++||+|++.      
T Consensus        15 ~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~   94 (341)
T cd05281          15 LVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCG   94 (341)
T ss_pred             EEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCC
Confidence            45566788999999999999 99999877643321  1123457789999999999999999999999999874      


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                            ..|+|++|++++.+.++++|+ .+.+.++++.++.++++++. ...++|++|||+|+ 
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~-  172 (341)
T cd05281          95 KCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-AGDVSGKSVLITGC-  172 (341)
T ss_pred             CChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-hcCCCCCEEEEECC-
Confidence                                  358999999999999999999 34466788889999999875 45589999999876 


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      |++|++++|+|+++
T Consensus       173 g~vg~~~~~la~~~  186 (341)
T cd05281         173 GPIGLMAIAVAKAA  186 (341)
T ss_pred             CHHHHHHHHHHHHc
Confidence            99999999999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.82  E-value=1.8e-19  Score=158.46  Aligned_cols=136  Identities=35%  Similarity=0.454  Sum_probs=120.5

Q ss_pred             cCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEEee
Q 023465          143 NVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMV  220 (282)
Q Consensus       143 ~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~~v  220 (282)
                      +.|.+.++|++|+|.+ ++|..|.....+.+.  ..+|.++|||++|+|+.+|+++.+|++||+|++.. .|+|++|+.+
T Consensus        20 ~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~   97 (320)
T cd05286          20 PVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP--LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVV   97 (320)
T ss_pred             CCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC--CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEe
Confidence            3345789999999999 999999877665432  24578999999999999999999999999999987 8999999999


Q ss_pred             cCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          221 PSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       221 ~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.+.++++|+  +..++++++....++++++ +..++++|++|+|+|++|++|++++++|+++
T Consensus        98 ~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~  160 (320)
T cd05286          98 PASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKAL  160 (320)
T ss_pred             cHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc
Confidence            9999999999  6778888899999999998 5577899999999999999999999999976

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.82  E-value=2.8e-19  Score=158.19  Aligned_cols=140  Identities=31%  Similarity=0.437  Sum_probs=122.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~~  214 (282)
                      .+.+.|.+.++|++||+.+ ++|..|.....+.+. ...+|.++|||++|+|+.+|++++.+++||+|.+..    .|+|
T Consensus        18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~   96 (325)
T cd08271          18 EEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPP-AWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSF   96 (325)
T ss_pred             eccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccc
Confidence            4556788899999999999 999998776655432 223478899999999999999999999999999884    6999


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|+.++.+.++++|+  ++.+++.+.+++.+|++++ +...+++|++|+|+|++|++|++++++|+++
T Consensus        97 ~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~  165 (325)
T cd08271          97 AEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRA  165 (325)
T ss_pred             eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence            9999999999999999  6778888999999999999 5567799999999999899999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.82  E-value=2.6e-19  Score=157.98  Aligned_cols=138  Identities=27%  Similarity=0.341  Sum_probs=121.0

Q ss_pred             cCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEEee
Q 023465          143 NVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMV  220 (282)
Q Consensus       143 ~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~~v  220 (282)
                      +.|.++++|++|++.+ ++|..|.....+.+..+..+|.++|||++|+|+.+|+++.++++||+|+... +|+|++|+.+
T Consensus        21 ~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~  100 (325)
T TIGR02824        21 PLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAV  100 (325)
T ss_pred             CCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEe
Confidence            3345789999999999 9999987776655433345678999999999999999999999999999885 4999999999


Q ss_pred             cCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          221 PSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       221 ~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++++++|+  ++.++++++.++.|+|+++ +...+++|++|+|+|++|++|++++++++++
T Consensus       101 ~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~  163 (325)
T TIGR02824       101 PAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAF  163 (325)
T ss_pred             cHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHc
Confidence            9999999999  6778888999999999997 6678899999999999999999999999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.81  E-value=2.9e-19  Score=156.61  Aligned_cols=140  Identities=32%  Similarity=0.385  Sum_probs=121.2

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCC--CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCc
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND--IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGS  213 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~  213 (282)
                      +.+.|.++++||+||+.+ ++|..|.....+...  ....+|.++|||++|+|+++|++++.+++||+|+...    .|+
T Consensus        19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~   98 (309)
T cd05289          19 DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGA   98 (309)
T ss_pred             ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCc
Confidence            344566889999999999 999998777655431  1234588999999999999999999999999999987    799


Q ss_pred             cccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhC-CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~-~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++|+.++.+.++++|+  ++.+++.++....++|+++.... +++|++|+|+|++|++|++++++|+++
T Consensus        99 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~  168 (309)
T cd05289          99 YAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKAR  168 (309)
T ss_pred             ceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHc
Confidence            99999999999999999  67788888899999999996554 799999999999999999999999875

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.80  E-value=1e-18  Score=155.37  Aligned_cols=137  Identities=21%  Similarity=0.222  Sum_probs=111.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCC--CCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDG--NDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~--~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae  216 (282)
                      .+++.|.+.++||+||+.+ ++|+.|.....+.  ...+...+.++|+|++|+|+++|++  +|++||+|+..  ++|+|
T Consensus        23 ~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~--~~~~~   98 (329)
T cd05288          23 VEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF--LGWQE   98 (329)
T ss_pred             EeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--cceEE
Confidence            4566788899999999999 9988654333222  1112234568999999999999964  89999999876  69999


Q ss_pred             EEeecC-CCeeeCCCC----hHHHHH-hhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPS-KHILPVARP----DPEVVA-MLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~-~~~~~~p~~----~~~~a~-l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+.++. +.++++|++    +.++++ +++++.|||+++ +...+.+|++|||+|++|++|++++|+|+++
T Consensus        99 ~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~  169 (329)
T cd05288          99 YAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLL  169 (329)
T ss_pred             EEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHc
Confidence            999999 999999983    245555 899999999999 4467799999999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.79  E-value=1.5e-19  Score=154.07  Aligned_cols=105  Identities=31%  Similarity=0.380  Sum_probs=93.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhh--HHHH------hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVA--SKFI------DLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~--~~~~------~~~   76 (282)
                      +|+||++||..+..+.++...|+++|+|+++|+|+|+. |++ +|||||+|+||+++|++.....  +++.      .++
T Consensus       126 ~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl  205 (241)
T PF13561_consen  126 GGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL  205 (241)
T ss_dssp             EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT
T ss_pred             CCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc
Confidence            48999999999999999999999999999999999999 999 9999999999999999865432  2221      267


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++..+|+|+|++++||+++.+.+.||..+..||++
T Consensus       206 ~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  206 GRLGTPEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            78889999999999999999999999999999986

...

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.78  E-value=2.6e-18  Score=145.31  Aligned_cols=146  Identities=19%  Similarity=0.168  Sum_probs=112.6

Q ss_pred             ccccCCCCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeC--CCCCCCCCCCeeE
Q 023465          131 MKRSSSQVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG--DSVNNVKVGTPAA  207 (282)
Q Consensus       131 ~~~~~~~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~  207 (282)
                      ..........++++|+|++||||+|..+ ++.+.-.......  ...-.|+-+|....|-++...  |+...|++||.|.
T Consensus        21 ~p~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~--~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~   98 (340)
T COG2130          21 APVPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA--PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV   98 (340)
T ss_pred             CCCCCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCC--cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE
Confidence            3334446667888999999999999999 7766422111111  122346667766654444332  5678899999998


Q ss_pred             EccCCccccEEeecCCCeeeCCC----ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          208 IMTFGSYAEFTMVPSKHILPVAR----PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       208 ~~~~G~~ae~~~v~~~~~~~~p~----~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ..  .+|+||..++.+.+.|+.+    .+.....|..++.|||.+| +....++||+|+|.+|+|+||..+.|+||..
T Consensus        99 ~~--~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlk  174 (340)
T COG2130          99 GV--SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK  174 (340)
T ss_pred             ec--ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhh
Confidence            76  5999999999999999975    4677788999999999999 5566699999999999999999999999964

>smart00829 PKS_ER Enoylreductase

Probab=99.78  E-value=2.3e-18  Score=149.14  Aligned_cols=123  Identities=27%  Similarity=0.310  Sum_probs=111.0

Q ss_pred             EEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEeecCCCeeeCCC--
Q 023465          154 LWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--  230 (282)
Q Consensus       154 v~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~p~--  230 (282)
                      ||+.+ ++|+.|.+...+.+    ..|.++|||++|+|+++|+++++|++||+|+....|+|+||+.++.+.++++|+  
T Consensus         2 i~v~~~~i~~~d~~~~~g~~----~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~p~~~   77 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL----PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPIPDGL   77 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC----CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEECCCCC
Confidence            67888 99999988776542    236789999999999999999999999999998889999999999999999999  


Q ss_pred             ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          231 PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       231 ~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++.+++.+.+++.|+|+++ +...+++|++|+|+|++|++|++++|+|+++
T Consensus        78 ~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~  128 (288)
T smart00829       78 SFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL  128 (288)
T ss_pred             CHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc
Confidence            6788888999999999998 6678899999999999899999999999875

Enoylreductase in Polyketide synthases.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=9.9e-19  Score=151.81  Aligned_cols=110  Identities=19%  Similarity=0.179  Sum_probs=94.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------HH--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------KF--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~~--~~~~~   77 (282)
                      +|+|||+||.++..+.+++..|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....+      ..  ..+++
T Consensus       138 ~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~  217 (271)
T PRK06505        138 GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR  217 (271)
T ss_pred             CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc
Confidence            48999999999988899999999999999999999999 99999999999999999998532211      11  12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      +..+|||+++.++||+++.+.+.+|..+..||++....+
T Consensus       218 r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~~~~  256 (271)
T PRK06505        218 RTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIVSM  256 (271)
T ss_pred             ccCCHHHHHHHHHHHhCccccccCceEEeecCCcccCCc
Confidence            788999999999999999988999999999999765443

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.77  E-value=3e-19  Score=133.72  Aligned_cols=80  Identities=29%  Similarity=0.468  Sum_probs=69.7

Q ss_pred             CCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----------------
Q 023465          149 SFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----------------  210 (282)
Q Consensus       149 ~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----------------  210 (282)
                      |+||||||++ ++|.+|.+.+.+.......+|+++|||++|+|+++|++|++|++||||++..                 
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            6999999999 9999999998885455678999999999999999999999999999999852                 


Q ss_pred             -----------CCccccEEeecCCCeeeC
Q 023465          211 -----------FGSYAEFTMVPSKHILPV  228 (282)
Q Consensus       211 -----------~G~~ae~~~v~~~~~~~~  228 (282)
                                 .|+||||+++|+++++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                       299999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.77  E-value=4.9e-18  Score=149.57  Aligned_cols=136  Identities=32%  Similarity=0.411  Sum_probs=118.0

Q ss_pred             CCCC-CCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEEeec
Q 023465          145 QLPE-SFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVP  221 (282)
Q Consensus       145 p~~~-~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~~v~  221 (282)
                      |.+. ++|++|++.+ ++|..|.....+.+......|.++|||++|+|+.+|+++..+++||+|+... .|+|++|+.++
T Consensus        22 ~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~  101 (323)
T cd08241          22 PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVP  101 (323)
T ss_pred             CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcC
Confidence            4444 5999999999 9999988776654322234577899999999999999999999999999987 79999999999


Q ss_pred             CCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          222 SKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       222 ~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .+.++++|+  +..+++.+..+..+|++++. ...+++|++|+|+|++|++|++++++|+++
T Consensus       102 ~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~  163 (323)
T cd08241         102 AAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKAL  163 (323)
T ss_pred             HHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHh
Confidence            999999999  56777788999999999984 677899999999999999999999999975

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.8e-18  Score=149.29  Aligned_cols=110  Identities=15%  Similarity=0.087  Sum_probs=94.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H----HHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S----KFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~----~~~--~~~~   77 (282)
                      +|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....  +    ...  .+++
T Consensus       139 ~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  218 (260)
T PRK06603        139 GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLK  218 (260)
T ss_pred             CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcC
Confidence            48999999999988889999999999999999999998 9999999999999999999853211  1    111  2567


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      ++.+|+|++++++||+++.+.+.+|..+..||++...++
T Consensus       219 r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  257 (260)
T PRK06603        219 RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGS  257 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccccCc
Confidence            788999999999999999999999999999999766554

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.1e-18  Score=151.68  Aligned_cols=111  Identities=16%  Similarity=0.158  Sum_probs=94.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----HH---HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----KF---IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----~~---~~~~~   77 (282)
                      +|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....+     .+   ..+++
T Consensus       136 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~  215 (274)
T PRK08415        136 GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLK  215 (274)
T ss_pred             CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchh
Confidence            38999999999988899999999999999999999999 99999999999999999987542211     11   12557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTS  117 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~p  117 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..+|++...+.|
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~~~~~  255 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNIMGMG  255 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccccCCC
Confidence            7899999999999999998889999999999997654443

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.5e-18  Score=148.64  Aligned_cols=107  Identities=21%  Similarity=0.119  Sum_probs=92.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKF-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~-   72 (282)
                      +.|+|||+||.++..+.++...|+++|+|+++|+|+|+. ++++|||||+|+||+++|+|.....           ++. 
T Consensus       135 ~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  214 (263)
T PRK08339        135 GFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEAL  214 (263)
T ss_pred             CCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHH
Confidence            458999999999998999999999999999999999999 9999999999999999999864321           111 


Q ss_pred             ---H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 ---I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ---~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                         .  .++++..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       215 ~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        215 QEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             HHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence               1  145678899999999999999999999999998888853

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=5.7e-18  Score=146.23  Aligned_cols=107  Identities=18%  Similarity=0.122  Sum_probs=92.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~~   77 (282)
                      .|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....  ++    +.  .+++
T Consensus       139 ~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  218 (261)
T PRK08690        139 NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR  218 (261)
T ss_pred             CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCC
Confidence            48999999999988899999999999999999999998 9999999999999999999864321  11    11  1557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++.+|||+++.++||+++.+.+.+|..+..||++..
T Consensus       219 r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        219 RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             CCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            789999999999999999999999999999998643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.75  E-value=5.8e-18  Score=145.85  Aligned_cols=108  Identities=17%  Similarity=0.128  Sum_probs=92.8

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-----------hHH
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-----------ASK   71 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-----------~~~   71 (282)
                      +++.|+||++||.++..+.+....|++||+|+++|+|+|+. +.++|||||+|+||+++|++....           .++
T Consensus       127 ~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  206 (259)
T PRK08340        127 KKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEE  206 (259)
T ss_pred             cCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHH
Confidence            34468999999999998899999999999999999999999 999999999999999999986421           111


Q ss_pred             -H----H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 -F----I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 -~----~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       .    .  .+++++.+|+|+++.++||+++++++.+|..+..||++
T Consensus       207 ~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        207 TWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             HHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence             1    1  14567889999999999999999999999999989885

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=4.3e-18  Score=146.65  Aligned_cols=106  Identities=19%  Similarity=0.157  Sum_probs=91.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....  ++    ..  .++.
T Consensus       140 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  219 (257)
T PRK08594        140 GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLR  219 (257)
T ss_pred             CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCcc
Confidence            48999999999998999999999999999999999998 9999999999999999999753211  11    11  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       220 r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        220 RTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             ccCCHHHHHHHHHHHcCcccccccceEEEECCchh
Confidence            78899999999999999999999999998898864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=6e-18  Score=145.30  Aligned_cols=106  Identities=21%  Similarity=0.142  Sum_probs=91.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~----~~--~~~~   77 (282)
                      +|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+|+|+|....  .++    ..  .+++
T Consensus       136 ~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  215 (252)
T PRK06079        136 GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDG  215 (252)
T ss_pred             CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCccc
Confidence            48999999999988899999999999999999999999 999999999999999999985321  111    11  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|||+++.++||+++++.+.+|..+..+|++.
T Consensus       216 r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~  250 (252)
T PRK06079        216 VGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVH  250 (252)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccccEEEeCCcee
Confidence            78999999999999999999999999998888853

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=8.1e-18  Score=145.20  Aligned_cols=106  Identities=16%  Similarity=0.068  Sum_probs=91.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H----HHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S----KFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~----~~~--~~~~   77 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....  +    ...  .+++
T Consensus       138 ~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  217 (260)
T PRK06997        138 DASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLR  217 (260)
T ss_pred             CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCccc
Confidence            48999999999988889999999999999999999998 9999999999999999998753211  1    111  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|||+++.++||+++++.+.+|..+..||++.
T Consensus       218 r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~  252 (260)
T PRK06997        218 RNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFN  252 (260)
T ss_pred             ccCCHHHHHHHHHHHhCccccCcceeEEEEcCChh
Confidence            78899999999999999999999999999998853

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.74  E-value=4.6e-18  Score=145.93  Aligned_cols=108  Identities=20%  Similarity=0.233  Sum_probs=92.3

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--h
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--D   74 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~   74 (282)
                      ++.+|+|||+||.++..+.++...|++||+|+++|+|+++. ++++|||||+|+||+++|++.....  +.    ..  .
T Consensus       132 ~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK12481        132 QGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERI  211 (251)
T ss_pred             cCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC
Confidence            33358999999999998888999999999999999999998 9999999999999999999864321  11    11  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.++.+|||+++.++||+++.+.+.+|..+..+|++
T Consensus       212 p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        212 PASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence            4567889999999999999999999999998888885

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=9.7e-18  Score=144.86  Aligned_cols=106  Identities=16%  Similarity=0.148  Sum_probs=91.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~------~~~~~   77 (282)
                      +|+|||+||..+..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....+  +.      ..+++
T Consensus       138 ~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  217 (262)
T PRK07984        138 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR  217 (262)
T ss_pred             CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCc
Confidence            48999999999888889999999999999999999998 99999999999999999987532111  11      12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       218 r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        218 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            88899999999999999988899999998888854

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=1.2e-17  Score=144.97  Aligned_cols=107  Identities=18%  Similarity=0.153  Sum_probs=92.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----HH---HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----KF---IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----~~---~~~~~   77 (282)
                      +|+|||+||.++..+.|++..|++||+|+++|+|+|+. +.++|||||+|+||+++|++.....+     +.   ..+++
T Consensus       141 ~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  220 (272)
T PRK08159        141 GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR  220 (272)
T ss_pred             CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCccc
Confidence            48999999998888899999999999999999999998 99999999999999999987532211     11   12556


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|||+++.++||+++.+.+.+|..+..+|++..
T Consensus       221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             ccCCHHHHHHHHHHHhCccccCccceEEEECCCcee
Confidence            788999999999999999999999999999999643

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.72  E-value=5e-17  Score=141.16  Aligned_cols=103  Identities=27%  Similarity=0.406  Sum_probs=93.3

Q ss_pred             CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHh
Q 023465          175 GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQA  252 (282)
Q Consensus       175 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~  252 (282)
                      +.++|.++|||++|+|+++|+++++|++||+|+..  ++|++|+.++.+.++++|+  ++.+++.+ ++++|||++++..
T Consensus        17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~~   93 (277)
T cd08255          17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVRDA   93 (277)
T ss_pred             cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHhc
Confidence            45689999999999999999999999999999986  5899999999999999999  56677766 8899999999888


Q ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          253 GPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       253 ~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++++|++|||+|+ |++|++++|+|+++.
T Consensus        94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g  121 (277)
T cd08255          94 EPRLGERVAVVGL-GLVGLLAAQLAKAAG  121 (277)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcC
Confidence            8899999999985 999999999999863

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.72  E-value=1.7e-17  Score=143.00  Aligned_cols=107  Identities=19%  Similarity=0.134  Sum_probs=91.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---hH---HHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---AS---KFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---~~---~~~--~~~~   77 (282)
                      +|+|||+||..+..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++....   .+   ...  .++.
T Consensus       140 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  219 (258)
T PRK07370        140 GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLR  219 (258)
T ss_pred             CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcC
Confidence            48999999999998999999999999999999999998 999999999999999999985321   11   111  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.+.||+++++.+.+|..+..||++..
T Consensus       220 r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        220 RTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             cCCCHHHHHHHHHHHhChhhccccCcEEEECCcccc
Confidence            788999999999999999999999998888888643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=2.6e-18  Score=134.19  Aligned_cols=109  Identities=26%  Similarity=0.391  Sum_probs=94.8

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H-H---H--Hh
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S-K---F--ID   74 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~-~---~--~~   74 (282)
                      ++..|.|||+||.++..+..+..+||++|+||+++||+|+. ++++.||||++.|--+-|+|.....  + +   +  ..
T Consensus       126 R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~ri  205 (245)
T KOG1207|consen  126 RQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRI  205 (245)
T ss_pred             ccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhC
Confidence            44568999999999999999999999999999999999999 9999999999999999999975431  1 1   1  12


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++++...++++++++||+|+.++-.+|..+...|++.
T Consensus       206 Pl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  206 PLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             chhhhhHHHHHHhhheeeeecCcCcccCceeeecCCcc
Confidence            66788999999999999999999988998888888753

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.8e-17  Score=142.27  Aligned_cols=110  Identities=23%  Similarity=0.223  Sum_probs=90.5

Q ss_pred             cCCCCcEEEEEcCCCccCC-CC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---HH--h
Q 023465            3 AAKKPGVIINMGSSAGLYP-MY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---FI--D   74 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~-~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---~~--~   74 (282)
                      +++.+|+||++||.++... .+ ....|++||+|+++|+|+++. ++++|||||+|+||+++|++.....+.   +.  .
T Consensus       134 ~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~  213 (253)
T PRK05867        134 KQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKI  213 (253)
T ss_pred             hcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcC
Confidence            3333589999999888643 23 457899999999999999998 999999999999999999986543221   11  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++++..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       214 ~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        214 PLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            45678999999999999999999999999999999853

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=2.8e-17  Score=141.61  Aligned_cols=107  Identities=17%  Similarity=0.141  Sum_probs=91.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~~   77 (282)
                      +|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....  ++    ..  .+++
T Consensus       141 ~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  220 (258)
T PRK07533        141 GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLR  220 (258)
T ss_pred             CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcC
Confidence            48999999999988889999999999999999999998 9999999999999999999864321  11    11  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++..
T Consensus       221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             CCCCHHHHHHHHHHHhChhhccccCcEEeeCCcccc
Confidence            788999999999999999888999999998988643

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.71  E-value=2.8e-17  Score=144.33  Aligned_cols=106  Identities=17%  Similarity=0.044  Sum_probs=89.3

Q ss_pred             cEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhh--HH----HH--hhh
Q 023465            8 GVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVA--SK----FI--DLM   76 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~   76 (282)
                      |+|||+||.++..+.|+. ..|++||+|+++|+|+|+. +++ +|||||+|+||+++|+|.....  ++    ..  .++
T Consensus       172 G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl  251 (303)
T PLN02730        172 GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPL  251 (303)
T ss_pred             CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCC
Confidence            899999999998888865 5899999999999999998 986 8999999999999999975321  11    11  144


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+..+|+|+++.++||+++.+.+.+|..+..+|++..
T Consensus       252 ~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        252 QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            6778999999999999999888889988888888533

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=5.3e-17  Score=142.49  Aligned_cols=114  Identities=18%  Similarity=0.096  Sum_probs=94.1

Q ss_pred             CcEEEEEcCCCccCCCCCCh-hhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhh--HHH------Hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDP-IYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVA--SKF------IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~-~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~   75 (282)
                      +|+|||++|.++..+.|+.. .|++||+|+++|+|+|+. +++ +|||||+|+||+++|+|.....  ++.      ..+
T Consensus       170 ~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p  249 (299)
T PRK06300        170 GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAP  249 (299)
T ss_pred             CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCC
Confidence            37999999999988888875 899999999999999998 887 5999999999999999864211  111      114


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCchhh
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEK  120 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~pq~~  120 (282)
                      +.+..+|+++++.++||+++.+.+.+|..+..+|++.....+...
T Consensus       250 ~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~  294 (299)
T PRK06300        250 LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEM  294 (299)
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCc
Confidence            567789999999999999998889999989899997766555443

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.3e-17  Score=140.40  Aligned_cols=107  Identities=23%  Similarity=0.279  Sum_probs=92.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHH------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKF------   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~------   72 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....      +..      
T Consensus       136 ~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T PRK07063        136 GRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLA  215 (260)
T ss_pred             CCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHh
Confidence            358999999999999999999999999999999999998 9999999999999999999864311      101      


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..++++..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       216 ~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        216 LQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            1145678899999999999999999999999999998853

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.69  E-value=6.4e-17  Score=139.47  Aligned_cols=107  Identities=17%  Similarity=0.121  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH------hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI------DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~------~~~   76 (282)
                      +.|+||++||..+..+.++...|++||+|+++|+++|+. +.++|||||+|+||+++|+|.....  ++..      .++
T Consensus       143 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T PRK08416        143 GGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL  222 (260)
T ss_pred             CCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC
Confidence            358999999999988889999999999999999999998 9999999999999999999854321  1111      145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+..+|+|+++.++||+++.+.+.+|..+..++++.
T Consensus       223 ~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        223 NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCee
Confidence            678899999999999999988888998888888753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.68  E-value=6.9e-17  Score=139.52  Aligned_cols=112  Identities=28%  Similarity=0.347  Sum_probs=93.6

Q ss_pred             ccCCCCcEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh-hh----hHHHH-
Q 023465            2 QAAKKPGVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL-KV----ASKFI-   73 (282)
Q Consensus         2 ~~~~~~g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~-~~----~~~~~-   73 (282)
                      ++++++|.|+++||.++..+.+.. ..|++||+|+++|+|+|+. |.++|||||+|+||.+.|++.. ..    .+++. 
T Consensus       137 ~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~  216 (270)
T KOG0725|consen  137 LKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKE  216 (270)
T ss_pred             HHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhh
Confidence            445567999999999998776665 8999999999999999999 9999999999999999999821 10    11211 


Q ss_pred             -------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 -------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 -------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                             .++++.++|+|+++.+.||+++++++.+|..+..||++..
T Consensus       217 ~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  217 ATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             hhccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence                   1578899999999999999999877999999999998654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.68  E-value=8.3e-17  Score=138.19  Aligned_cols=109  Identities=23%  Similarity=0.286  Sum_probs=92.5

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------HHHh-
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------KFID-   74 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~~~~-   74 (282)
                      +++.+|+||++||..+..+.+....|++||+|+++|+++++. +.++||+||+|+||+++|++.....+      +..+ 
T Consensus       133 ~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~  212 (253)
T PRK08993        133 AQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR  212 (253)
T ss_pred             hCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc
Confidence            333358999999999988888999999999999999999998 99999999999999999998643211      1111 


Q ss_pred             -hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 -LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 -~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       +.+++.+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       213 ~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        213 IPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence             3467889999999999999999999999988888875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.8e-17  Score=137.79  Aligned_cols=108  Identities=25%  Similarity=0.382  Sum_probs=91.1

Q ss_pred             CCcEEEEEcCCCccCCCCC--ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--h---HHH--Hhh
Q 023465            6 KPGVIINMGSSAGLYPMYN--DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--A---SKF--IDL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~--~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~---~~~--~~~   75 (282)
                      +.|+||++||.++..+.+.  ...|++||+|+++|+|+++. +.++|||||+|+||+++|+|....  .   +.+  ..+
T Consensus       136 ~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p  215 (254)
T PRK06114        136 GGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTP  215 (254)
T ss_pred             CCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCC
Confidence            3589999999998776554  68999999999999999998 999999999999999999986421  1   111  125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +++..+|||+++.++||+++.+.+.+|..+..+|++..
T Consensus       216 ~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        216 MQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCEec
Confidence            67889999999999999999999999999999998654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.1e-16  Score=136.43  Aligned_cols=106  Identities=19%  Similarity=0.203  Sum_probs=91.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----------HHH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----------KFI-   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----------~~~-   73 (282)
                      +.|+||++||.++..+.++...|+++|+|+++|+++|+. +.++||+||+|+||+++|++......          +.. 
T Consensus       137 ~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (265)
T PRK07062        137 AAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTA  216 (265)
T ss_pred             CCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHH
Confidence            358999999999999999999999999999999999998 99999999999999999998643211          110 


Q ss_pred             -------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 -------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 -------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                             .++++..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       217 ~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        217 ALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence                   14457789999999999999998889999999989885

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.9e-16  Score=135.79  Aligned_cols=105  Identities=23%  Similarity=0.308  Sum_probs=90.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----HHHHh---hhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----SKFID---LMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----~~~~~---~~~   77 (282)
                      .|+||++||.++..+.++...|++||+|+++|+|+++. ++++|||||+|+||+++|+|.....     .....   +++
T Consensus       137 ~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  216 (252)
T PRK12747        137 NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFN  216 (252)
T ss_pred             CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCccc
Confidence            38999999999999999999999999999999999998 9999999999999999999864321     11111   346


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       217 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        217 RLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             CCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            7789999999999999988888899888888874

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=3.4e-16  Score=134.75  Aligned_cols=107  Identities=15%  Similarity=0.143  Sum_probs=87.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~~   77 (282)
                      +|+||+++|. +..+.+.+..|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....  ++    +.  .+++
T Consensus       138 ~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  216 (256)
T PRK07889        138 GGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLG  216 (256)
T ss_pred             CceEEEEeec-ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccc
Confidence            4899999875 345667888999999999999999998 9999999999999999999864321  11    11  1334


Q ss_pred             -CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           78 -GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        78 -~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                       +..+|+|+++.++||+++.+.+.+|..+..+|++...
T Consensus       217 ~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        217 WDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             cccCCHHHHHHHHHHHhCcccccccceEEEEcCceecc
Confidence             4789999999999999998889999999989886543

>PRK08589 short chain dehydrogenase; Validated

Probab=99.65  E-value=2.7e-16  Score=136.56  Aligned_cols=106  Identities=31%  Similarity=0.352  Sum_probs=90.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------HHH----
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------KFI----   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------~~~----   73 (282)
                      +|+||++||.++..+.++...|++||+|+++|+++++. +.++||+||+|+||+++|++......        .+.    
T Consensus       133 ~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  212 (272)
T PRK08589        133 GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQK  212 (272)
T ss_pred             CCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhh
Confidence            38999999999998889999999999999999999998 99999999999999999998653211        111    


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        .++++..+|+|+++.++||+++.+.+.+|..+..+|+..
T Consensus       213 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~  253 (272)
T PRK08589        213 WMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVM  253 (272)
T ss_pred             ccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcc
Confidence              134567899999999999999988888998888888854

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.1e-16  Score=136.44  Aligned_cols=105  Identities=26%  Similarity=0.252  Sum_probs=89.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh--hhC--CCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID--LMG--GFVP   81 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--~~~--~~~~   81 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+|| ++|+|.....+....  +..  +..+
T Consensus       149 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T PRK07791        149 DARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMA  227 (286)
T ss_pred             CcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCC
Confidence            37999999999999999999999999999999999998 99999999999999 899986543222211  111  3579


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           82 MEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      |+|+++.++||+++.+.+.+|..+..+|+..
T Consensus       228 pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        228 PENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence            9999999999999988889999999898853

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.65  E-value=3.1e-16  Score=129.98  Aligned_cols=97  Identities=30%  Similarity=0.391  Sum_probs=79.1

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hH----HHHh
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-AS----KFID   74 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~----~~~~   74 (282)
                      |.+++ .|+|||+||++|.+++|+.+.|++||+++..|++.|+. +..++|||.+|+||.+.|...... .+    ...+
T Consensus       127 m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~  205 (246)
T COG4221         127 MVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADK  205 (246)
T ss_pred             HHhcC-CceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHH
Confidence            45554 58999999999999999999999999999999999999 999999999999999965543221 11    1111


Q ss_pred             --hhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           75 --LMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        75 --~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                        .....++|+++|+.++|.++.+..
T Consensus       206 ~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         206 VYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HhccCCCCCHHHHHHHHHHHHhCCCc
Confidence              234578999999999999987765

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.9e-16  Score=134.07  Aligned_cols=108  Identities=21%  Similarity=0.247  Sum_probs=92.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-------HHH---h
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-------KFI---D   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-------~~~---~   74 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. +.++|||||+|+||+++|++.....+       ...   .
T Consensus       128 ~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~  207 (261)
T PRK08265        128 GGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFH  207 (261)
T ss_pred             CCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccC
Confidence            358999999999999999999999999999999999998 99999999999999999998643211       111   1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++++..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       208 p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~  246 (261)
T PRK08265        208 LLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYSA  246 (261)
T ss_pred             CCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            456778999999999999999888999999998998643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.64  E-value=4.7e-16  Score=135.29  Aligned_cols=108  Identities=28%  Similarity=0.376  Sum_probs=92.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHH-----
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKF-----   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~-----   72 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+|+++. +.++|||||+|+||+++|++.....       .+.     
T Consensus       152 ~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  231 (278)
T PRK08277        152 KGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKIL  231 (278)
T ss_pred             CCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHh
Confidence            358999999999999999999999999999999999998 9999999999999999999754321       011     


Q ss_pred             -HhhhCCCCCHHHHHHHHHHhhcC-CCCceEEEEEecCCcccc
Q 023465           73 -IDLMGGFVPMEMVVKGAFELITD-ESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 -~~~~~~~~~~~~~a~~~~~l~~~-~~~~~~~~~~~~~g~~~~  113 (282)
                       ..+++++.+|+|++++++||+++ .+.+.+|..+..||++..
T Consensus       232 ~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        232 AHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             ccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence             11456788999999999999999 888999999998998643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.64  E-value=4.2e-16  Score=132.50  Aligned_cols=97  Identities=28%  Similarity=0.392  Sum_probs=81.1

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh--hhHHHHhhhC
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK--VASKFIDLMG   77 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~--~~~~~~~~~~   77 (282)
                      |.++ +.|+||||+|.+|..+.|..+.|++||+++.+|+++|+. +.++||+|.++|||++.|+|+..  .......+..
T Consensus       130 m~~~-~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~  208 (265)
T COG0300         130 MVER-GAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGE  208 (265)
T ss_pred             HHhc-CCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchh
Confidence            3444 459999999999999999999999999999999999998 99999999999999999999962  1111112334


Q ss_pred             CCCCHHHHHHHHHHhhcCCCC
Q 023465           78 GFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~   98 (282)
                      .+.+|+++++.+++.+.....
T Consensus       209 ~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         209 LVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             hccCHHHHHHHHHHHHhcCCc
Confidence            578999999999999976554

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6e-16  Score=133.45  Aligned_cols=104  Identities=24%  Similarity=0.233  Sum_probs=89.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHH----H--HhhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASK----F--IDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~----~--~~~~~~   78 (282)
                      .|+||+++|..+..+.++...|++||+|+++|+++++. +.++|||||+|+||+++|++.... .++    +  ..++.+
T Consensus       149 ~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r  228 (262)
T PRK07831        149 GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGR  228 (262)
T ss_pred             CcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCC
Confidence            58999999999988889999999999999999999998 999999999999999999986432 111    1  124567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+|+|+++.++||+++.+.+.+|..+..+++
T Consensus       229 ~~~p~~va~~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        229 AAEPWEVANVIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence            88999999999999999988999998887774

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-16  Score=134.43  Aligned_cols=104  Identities=15%  Similarity=0.081  Sum_probs=86.1

Q ss_pred             cEEEEEcCCCccCCC------------------------------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEe
Q 023465            8 GVIINMGSSAGLYPM------------------------------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLC   56 (282)
Q Consensus         8 g~Iv~isS~~~~~~~------------------------------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~   56 (282)
                      |++|++||.++....                              +++..|++||+|+++|+|+|+. +.++|||||+|+
T Consensus       119 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~  198 (275)
T PRK06940        119 GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSIS  198 (275)
T ss_pred             CCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEec
Confidence            789999998886542                              2467899999999999999998 999999999999


Q ss_pred             CCcccCcchhhhh----HH----H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           57 PEFVQTEMGLKVA----SK----F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        57 PG~v~T~~~~~~~----~~----~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ||+++|+|.....    ++    .  ..++++..+|||+++.++||+++.+.+.+|..+..||+.
T Consensus       199 PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        199 PGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             cCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            9999999864211    11    1  114567899999999999999999999999888888884

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=9.6e-16  Score=131.86  Aligned_cols=106  Identities=24%  Similarity=0.218  Sum_probs=90.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-HHH--hhhCCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-KFI--DLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-~~~--~~~~~~~~   81 (282)
                      ..|+||++||.++..+.+++..|++||+|+++|+++++. +.++||+||+|+||+++|++...... .+.  .+..+..+
T Consensus       146 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  225 (256)
T PRK12859        146 SGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGE  225 (256)
T ss_pred             CCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcC
Confidence            358999999999998999999999999999999999998 99999999999999999997533211 111  13456789


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           82 MEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+|+++.++|++++.+.+.+|..+..|+++
T Consensus       226 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        226 PKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999999998889999999888874

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.8e-16  Score=133.38  Aligned_cols=108  Identities=24%  Similarity=0.330  Sum_probs=90.2

Q ss_pred             CCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH---HH---hh
Q 023465            6 KPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK---FI---DL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~---~~---~~   75 (282)
                      +.|+||++||.++. .+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|+|.....  ++   +.   .+
T Consensus       134 ~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  213 (254)
T PRK07478        134 GGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA  213 (254)
T ss_pred             CCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC
Confidence            45899999999886 5788999999999999999999998 9999999999999999999764321  11   11   13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ..+..+|+|+++.++||+++.+.+.+|..+..+|++..
T Consensus       214 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        214 LKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCchhc
Confidence            45678999999999999999888889988888888543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.63  E-value=7.9e-16  Score=131.28  Aligned_cols=105  Identities=25%  Similarity=0.281  Sum_probs=87.4

Q ss_pred             CcEEEEEcCCCcc---------------------------CCCCCChhhHhhHHHHHHHHHHhc-c-ccCCCcEEEEEeC
Q 023465            7 PGVIINMGSSAGL---------------------------YPMYNDPIYSASKGGVVLFTRSLT-P-YKRKGIRINVLCP   57 (282)
Q Consensus         7 ~g~Iv~isS~~~~---------------------------~~~~~~~~Y~asKaal~~~t~~la-~-~~~~gI~v~~i~P   57 (282)
                      .|+|||+||.++.                           .+.++...|++||+|+++|+|+++ . ++++|||||+|+|
T Consensus        89 ~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~P  168 (241)
T PRK12428         89 GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAP  168 (241)
T ss_pred             CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeec
Confidence            3899999999886                           256678899999999999999999 8 9999999999999


Q ss_pred             CcccCcchhhhhH----H----HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           58 EFVQTEMGLKVAS----K----FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        58 G~v~T~~~~~~~~----~----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+++|+|.....+    +    ...++.+..+||++++.++|++++.+.+.+|..+..+|++
T Consensus       169 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        169 GPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL  230 (241)
T ss_pred             CCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCch
Confidence            9999998653221    1    1124556789999999999999988888888888888885

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.63  E-value=8e-16  Score=130.71  Aligned_cols=107  Identities=25%  Similarity=0.286  Sum_probs=92.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH-----hhhCC
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI-----DLMGG   78 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~-----~~~~~   78 (282)
                      ++.|+||++||.++..+.++...|++||+++.+|+++++. +.++||+||+|+||+++|++.....+...     .++.+
T Consensus       126 ~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  205 (239)
T TIGR01831       126 RQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNR  205 (239)
T ss_pred             cCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCC
Confidence            3458999999999999999999999999999999999998 98999999999999999999764333211     14567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.++||+++.+.+.+|..+..+|+.
T Consensus       206 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       206 MGQPAEVASLAGFLMSDGASYVTRQVISVNGGM  238 (239)
T ss_pred             CCCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            889999999999999999889999888877763

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08643 acetoin reductase; Validated

Probab=99.63  E-value=1.3e-15  Score=130.80  Aligned_cols=108  Identities=26%  Similarity=0.266  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----------HH--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----------KF--   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----------~~--   72 (282)
                      ..|+||++||..+..+.++...|++||++++.|++.++. +.++||+||+|+||+++|++.....+          .+  
T Consensus       130 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  209 (256)
T PRK08643        130 HGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGM  209 (256)
T ss_pred             CCCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHH
Confidence            358999999999998999999999999999999999998 99999999999999999998653211          11  


Q ss_pred             ---H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 ---I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 ---~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                         .  .+.++..+|+++++.++||+++.+...+|..+..||++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        210 EQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             HHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCeec
Confidence               0  1345678999999999999999988899999998988643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.63  E-value=9.5e-16  Score=132.12  Aligned_cols=113  Identities=31%  Similarity=0.338  Sum_probs=95.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~~------~~~~   76 (282)
                      ..|+||++||..+..+.++...|++||+|+++|+++++. +.++||+||+|+||+++|++....  .++.      ..++
T Consensus       136 ~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (261)
T PRK08936        136 IKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM  215 (261)
T ss_pred             CCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC
Confidence            358999999999988999999999999999999999998 999999999999999999985421  1111      1144


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCch
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSE  118 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~pq  118 (282)
                      ++..+|+++++.++||+++.+...+|..+..+++....|..|
T Consensus       216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~~~~~  257 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSFQ  257 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccCcccc
Confidence            677899999999999999988888998888899987777655

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.4e-15  Score=130.98  Aligned_cols=107  Identities=25%  Similarity=0.216  Sum_probs=90.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----------H----H
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----------S----K   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----------~----~   71 (282)
                      .|+||++||..+..+.+....|+++|+|+++|+++++. +.++|||||+|+||+++|++.....          +    .
T Consensus       132 ~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  211 (259)
T PRK06125        132 SGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQE  211 (259)
T ss_pred             CcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHH
Confidence            48999999999988888889999999999999999998 9999999999999999999753211          1    1


Q ss_pred             HH--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 FI--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.  .++.++.+|+|+++.++||+++.+.+.+|..+..+|++..
T Consensus       212 ~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  255 (259)
T PRK06125        212 LLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGISA  255 (259)
T ss_pred             HhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCeee
Confidence            11  1345678999999999999998888999999999988643

>PRK07985 oxidoreductase; Provisional

Probab=99.62  E-value=1.5e-15  Score=133.46  Aligned_cols=105  Identities=21%  Similarity=0.184  Sum_probs=90.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hH----HHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--AS----KFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~----~~~--~~~~   77 (282)
                      .|+||++||.++..+.++...|++||+|+++|+++++. ++++|||||+|+||+++|++....  .+    .+.  .+++
T Consensus       178 ~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  257 (294)
T PRK07985        178 GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK  257 (294)
T ss_pred             CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCC
Confidence            47999999999998899999999999999999999998 999999999999999999985211  11    111  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..+|+|+++.++||+++++.+.+|..+..+|+.
T Consensus       258 r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            7889999999999999999999999998888875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.62  E-value=1.4e-15  Score=130.72  Aligned_cols=99  Identities=18%  Similarity=0.287  Sum_probs=83.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----H----H--Hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----K----F--ID   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----~----~--~~   74 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....+     +    +  ..
T Consensus       143 ~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T TIGR01500       143 NRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK  222 (256)
T ss_pred             CCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH
Confidence            47999999999999999999999999999999999998 99999999999999999998753211     1    1  12


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      ++++..+|+|+++.+++++++ +...+|.++.
T Consensus       223 ~~~~~~~p~eva~~~~~l~~~-~~~~~G~~~~  253 (256)
T TIGR01500       223 AKGKLVDPKVSAQKLLSLLEK-DKFKSGAHVD  253 (256)
T ss_pred             hcCCCCCHHHHHHHHHHHHhc-CCcCCcceee
Confidence            557789999999999999974 4566776654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.61  E-value=1.4e-15  Score=131.27  Aligned_cols=106  Identities=25%  Similarity=0.222  Sum_probs=89.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-----------hHH---
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-----------ASK---   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-----------~~~---   71 (282)
                      .|+||+++|.++..+.++...|++||+|+++|+++|+. +++. ||||+|+||+++|+|....           .++   
T Consensus       135 ~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~  213 (263)
T PRK06200        135 GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLAD  213 (263)
T ss_pred             CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhH
Confidence            48999999999998889999999999999999999998 8875 9999999999999985311           011   


Q ss_pred             -HH--hhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccc
Q 023465           72 -FI--DLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 -~~--~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~  113 (282)
                       ..  .++++..+|+|+++.++||+++. +.+.+|..+..||++..
T Consensus       214 ~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        214 MIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             HhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCceee
Confidence             11  14577899999999999999998 88999999999998643

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.61  E-value=1.3e-15  Score=131.65  Aligned_cols=106  Identities=24%  Similarity=0.288  Sum_probs=90.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc-Ccchhhh------------hHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ-TEMGLKV------------ASK   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~~------------~~~   71 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+|+++. +.++|||||+|+||+++ |++....            .++
T Consensus       136 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~  215 (266)
T PRK06171        136 HDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQ  215 (266)
T ss_pred             CCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHH
Confidence            358999999999998999999999999999999999998 99999999999999996 6663211            011


Q ss_pred             ----H----HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 ----F----IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 ----~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                          +    ..++++..+|+|+++++.||+++.+.+.+|..+..||++
T Consensus       216 ~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        216 LRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             HHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence                1    124577889999999999999999999999999998874

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.1e-15  Score=134.92  Aligned_cols=101  Identities=16%  Similarity=0.190  Sum_probs=79.6

Q ss_pred             CCcEEEEEcCCCccC---CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---h-HHH-----
Q 023465            6 KPGVIINMGSSAGLY---PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---A-SKF-----   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~---~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---~-~~~-----   72 (282)
                      ++|+|||+||..+..   +.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|....   . +.+     
T Consensus       150 ~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  229 (305)
T PRK08303        150 PGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA  229 (305)
T ss_pred             CCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc
Confidence            358999999977643   334577899999999999999999 999999999999999999985321   1 111     


Q ss_pred             Hhh-hCCCCCHHHHHHHHHHhhcCCC-CceEEEEEe
Q 023465           73 IDL-MGGFVPMEMVVKGAFELITDES-KAGSCLWIT  106 (282)
Q Consensus        73 ~~~-~~~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~  106 (282)
                      ..+ ..+..+|+|+++.++||+++.+ .+.+|..+.
T Consensus       230 ~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        230 KEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             cccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            112 2455689999999999999875 477888775

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.61  E-value=1.5e-15  Score=129.79  Aligned_cols=105  Identities=24%  Similarity=0.278  Sum_probs=89.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~----~~--~~~~   77 (282)
                      .|+||++||.++..+.++...|++||+++++|+|+++. +.++||+||+|+||+++|++......  .    ..  .+.+
T Consensus       132 ~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  211 (248)
T TIGR01832       132 GGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAG  211 (248)
T ss_pred             CeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCC
Confidence            58999999999888888899999999999999999998 99999999999999999998643211  1    11  1345


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+|+|+++.+++++++.+.+.+|..+..+|++
T Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       212 RWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            7889999999999999988888888888888875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-15  Score=130.12  Aligned_cols=106  Identities=25%  Similarity=0.284  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~   76 (282)
                      +.|+||++||..+..+.+....|++||+|+++|+++++. ++++||+||+|+||+++|++.....  ++.      ..++
T Consensus       136 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~  215 (254)
T PRK08085        136 QAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA  215 (254)
T ss_pred             CCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC
Confidence            358999999999988889999999999999999999998 9999999999999999999865321  111      1145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++.+|||+++.++|++++.+.+.+|..+..+|++
T Consensus       216 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        216 ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            67889999999999999999999999988888885

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.2e-15  Score=127.09  Aligned_cols=96  Identities=15%  Similarity=0.029  Sum_probs=81.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      +|+|||+||.+    .+....|++||+|+++|+|+|+. +.++|||||+|+||+++|++.....   .   ....+|+|+
T Consensus       123 ~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~---~---~p~~~~~~i  192 (223)
T PRK05884        123 GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS---R---TPPPVAAEI  192 (223)
T ss_pred             CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc---C---CCCCCHHHH
Confidence            48999999976    35668999999999999999998 9999999999999999999753211   0   112489999


Q ss_pred             HHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           86 VKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        86 a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++.++||+++.+.+.+|..+..||++.
T Consensus       193 a~~~~~l~s~~~~~v~G~~i~vdgg~~  219 (223)
T PRK05884        193 ARLALFLTTPAARHITGQTLHVSHGAL  219 (223)
T ss_pred             HHHHHHHcCchhhccCCcEEEeCCCee
Confidence            999999999999999999998888853

>PRK12743 oxidoreductase; Provisional

Probab=99.60  E-value=3.3e-15  Score=128.41  Aligned_cols=107  Identities=19%  Similarity=0.151  Sum_probs=91.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH------HhhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF------IDLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~------~~~~~~   78 (282)
                      ++|+||++||..+..+.++...|+++|+++++|+++++. +.++||++|+|+||+++|++......+.      ..++.+
T Consensus       131 ~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T PRK12743        131 QGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGR  210 (256)
T ss_pred             CCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCC
Confidence            358999999999998999999999999999999999998 9999999999999999999864321111      113456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++|++++.+.+.+|.++..+|+..
T Consensus       211 ~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        211 PGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            7899999999999999888888998888898854

>PRK06398 aldose dehydrogenase; Validated

Probab=99.60  E-value=2.6e-15  Score=129.39  Aligned_cols=106  Identities=26%  Similarity=0.255  Sum_probs=89.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--------HHH----
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--------SKF----   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--------~~~----   72 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+|+++. +.+. |+||+|+||+++|+|.....        ...    
T Consensus       122 ~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  200 (258)
T PRK06398        122 DKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKI  200 (258)
T ss_pred             CCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHH
Confidence            358999999999998999999999999999999999998 8776 99999999999999864321        100    


Q ss_pred             -----HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 -----IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 -----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                           ..++++..+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       201 ~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        201 REWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLR  245 (258)
T ss_pred             HhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccc
Confidence                 0144667899999999999999988888998888888853

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.60  E-value=1.8e-15  Score=130.25  Aligned_cols=106  Identities=21%  Similarity=0.250  Sum_probs=90.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHHH--hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKFI--DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~~--~~~   76 (282)
                      +.|+||++||..+..+.++...|++||+|+++|+++++. +.++|||||+|+||+++|++.....      ....  .+.
T Consensus       141 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK06935        141 GSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA  220 (258)
T ss_pred             CCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC
Confidence            358999999999988889999999999999999999998 9999999999999999999854211      1111  144


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        221 GRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            67899999999999999998888899888888874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.59  E-value=3.4e-15  Score=141.13  Aligned_cols=106  Identities=27%  Similarity=0.355  Sum_probs=91.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHHH--hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKFI--DLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~~--~~~   76 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. +.++|||||+|+||+++|+|.....       +.+.  .++
T Consensus       393 ~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  472 (520)
T PRK06484        393 GGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL  472 (520)
T ss_pred             CCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC
Confidence            48999999999999999999999999999999999998 9999999999999999999864321       1111  134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+..+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       473 ~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~~  508 (520)
T PRK06484        473 GRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGWT  508 (520)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            567899999999999999888889999998898853

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.9e-15  Score=127.67  Aligned_cols=107  Identities=25%  Similarity=0.294  Sum_probs=90.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~   76 (282)
                      ..|+||++||..+..+.++...|++||+++++|+++++. +.++ |++|+|+||+++|++.....  ++    ..  .++
T Consensus       126 ~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  204 (252)
T PRK07856        126 GGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL  204 (252)
T ss_pred             CCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC
Confidence            458999999999999999999999999999999999998 8888 99999999999999864321  11    11  134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+..+|+|+++.++||+++.+.+.+|..+..+|+...
T Consensus       205 ~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        205 GRLATPADIAWACLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence            6678999999999999999888999999998988543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.59  E-value=5.1e-15  Score=127.42  Aligned_cols=106  Identities=24%  Similarity=0.298  Sum_probs=88.5

Q ss_pred             CCcEEEEEcCCCccCCCC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------HH
Q 023465            6 KPGVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------KF   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~~   72 (282)
                      +.|+||++||..+..+.+ +...|++||+++++|+++++. +.++||+||+|+||+++|++......           +.
T Consensus       129 ~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  208 (260)
T PRK06523        129 GSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGA  208 (260)
T ss_pred             CCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHH
Confidence            358999999999988765 789999999999999999998 99999999999999999998643211           11


Q ss_pred             H---------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I---------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~---------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .         .++++..+|+|+++.++||+++++.+.+|..+..+|+.
T Consensus       209 ~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~  256 (260)
T PRK06523        209 KQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT  256 (260)
T ss_pred             HHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence            1         13456789999999999999998888888888888874

>PRK12742 oxidoreductase; Provisional

Probab=99.58  E-value=6.1e-15  Score=125.04  Aligned_cols=105  Identities=24%  Similarity=0.197  Sum_probs=89.0

Q ss_pred             CcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---HH--hhhCCC
Q 023465            7 PGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---FI--DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---~~--~~~~~~   79 (282)
                      .|+||++||..+. .+.++...|++||++++.|++.++. +.++||+||+|+||+++|++.....+.   ..  .++.++
T Consensus       124 ~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~  203 (237)
T PRK12742        124 GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRH  203 (237)
T ss_pred             CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCC
Confidence            4799999998884 5778899999999999999999998 999999999999999999986432111   11  144678


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+|+|+++.+.||+++.+.+.+|..+..||++
T Consensus       204 ~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        204 GRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            89999999999999998888899888888874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.58  E-value=2.6e-15  Score=129.49  Aligned_cols=106  Identities=21%  Similarity=0.255  Sum_probs=88.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-------------hHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-------------ASKF   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-------------~~~~   72 (282)
                      .|+||+++|..+..+.++...|++||+|+++|+++++. ++++ ||||+|+||+++|+|....             ..+.
T Consensus       134 ~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~  212 (262)
T TIGR03325       134 RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDM  212 (262)
T ss_pred             CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhh
Confidence            37899999999988888899999999999999999998 9887 9999999999999985321             0111


Q ss_pred             H---hhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccc
Q 023465           73 I---DLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 ~---~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~  113 (282)
                      .   .++++..+|+|+++.++||+++. +.+.+|..+..||++..
T Consensus       213 ~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       213 LKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             hhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeee
Confidence            1   14678899999999999999985 56789999988988653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5.7e-15  Score=126.60  Aligned_cols=106  Identities=29%  Similarity=0.391  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HHHH------hh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SKFI------DL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~~~------~~   75 (282)
                      +.++||++||..+..+.++...|++||+|+++|+++++. +.++||+||+|+||+++|++.....   ++..      .+
T Consensus       135 ~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (253)
T PRK06172        135 GGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP  214 (253)
T ss_pred             CCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC
Confidence            358999999999999999999999999999999999998 9999999999999999999976431   1111      13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+..+|+++++.++||+++...+.+|.++..|+++
T Consensus       215 ~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        215 VGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             CCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            456789999999999999998889999999888875

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.8e-15  Score=126.98  Aligned_cols=106  Identities=22%  Similarity=0.277  Sum_probs=90.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~   76 (282)
                      +.|+|+++||..+..+.++.+.|++||+++++|+++++. +.++||+||+|+||+++|++.....  ++    ..  .+.
T Consensus       136 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK07035        136 GGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL  215 (252)
T ss_pred             CCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC
Confidence            358999999999988999999999999999999999998 9999999999999999999864321  11    11  134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+..+|+|+++.++|++++.+.+.+|..+..||++
T Consensus       216 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        216 RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            56789999999999999999888888888888774

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.3e-15  Score=127.41  Aligned_cols=107  Identities=29%  Similarity=0.345  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----HHHH--hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----SKFI--DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----~~~~--~~~~   77 (282)
                      +.|+||++||..+..+.+....|++||+++++|+++++. ++++||+||+|+||+++|++.....     ....  .+..
T Consensus       139 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  218 (255)
T PRK06841        139 GGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAG  218 (255)
T ss_pred             CCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCC
Confidence            358999999999989999999999999999999999998 9999999999999999999864321     1111  1346


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++.+|+|+++.+++++++.+.+.+|..+..+|++.
T Consensus       219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        219 RFAYPEEIAAAALFLASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            77899999999999999998889998888888853

>PRK06128 oxidoreductase; Provisional

Probab=99.57  E-value=9.9e-15  Score=128.53  Aligned_cols=106  Identities=25%  Similarity=0.193  Sum_probs=90.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~----~~--~~~~   77 (282)
                      +++|||+||..+..+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|++....  .++    +.  .++.
T Consensus       184 ~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~  263 (300)
T PRK06128        184 GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMK  263 (300)
T ss_pred             CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCC
Confidence            47999999999998999999999999999999999998 999999999999999999985321  111    11  2456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..+|+..
T Consensus       264 r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        264 RPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEe
Confidence            78899999999999999988888998888888753

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.57  E-value=8.6e-15  Score=125.50  Aligned_cols=112  Identities=25%  Similarity=0.215  Sum_probs=89.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCc-chhhh--hHHHH------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTE-MGLKV--ASKFI------   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~-~~~~~--~~~~~------   73 (282)
                      +..|+|||+||..+..+.++...|++||+|+++|+|+|+. +.+ +||+||+|+||+++|. +....  .++..      
T Consensus       128 ~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~  207 (252)
T PRK07677        128 GIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS  207 (252)
T ss_pred             CCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc
Confidence            3358999999999988888899999999999999999998 864 7999999999999954 32111  11111      


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      .++.++.+|+++++.+.+++++.+...+|..+..+++....+.
T Consensus       208 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  250 (252)
T PRK07677        208 VPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWLNQY  250 (252)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCCeecCCC
Confidence            1345788999999999999998888889988888888655444

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=6.3e-15  Score=126.55  Aligned_cols=106  Identities=26%  Similarity=0.399  Sum_probs=87.3

Q ss_pred             CCcEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hH---HHH-----
Q 023465            6 KPGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--AS---KFI-----   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~---~~~-----   73 (282)
                      +.|+||++||.++.. +.++...|++||+|+++|+|+++. +.++||+||+|+||+++|++....  .+   ...     
T Consensus       129 ~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  208 (255)
T PRK06463        129 KNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRN  208 (255)
T ss_pred             CCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHh
Confidence            358999999998874 456788999999999999999998 999999999999999999986421  10   111     


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       .++++..+|+++++.+++++++.+.+.+|..+..+|+.
T Consensus       209 ~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        209 KTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             CCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence             13456789999999999999988888888888878774

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=9.3e-15  Score=125.05  Aligned_cols=105  Identities=16%  Similarity=0.195  Sum_probs=88.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH----H--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF----I--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~----~--~~~~~   78 (282)
                      .|+||++||..+..+......|++||+|+++|+|+++. +.++|||||+|+||+++|++.... .++.    .  .++.+
T Consensus       138 ~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (253)
T PRK08642        138 FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRK  217 (253)
T ss_pred             CeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCC
Confidence            48999999988877777788999999999999999998 999999999999999999854321 1111    1  14467


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.+.||+++.+.+.+|..+..+|++
T Consensus       218 ~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        218 VTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             CCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            889999999999999998888999888888874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.56  E-value=1.2e-14  Score=124.94  Aligned_cols=105  Identities=21%  Similarity=0.209  Sum_probs=89.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH----H--hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF----I--DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~----~--~~~~   77 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+++++. +.++|||||+|+||+++|++.... .++.    .  .++.
T Consensus       137 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T PRK06113        137 GGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR  216 (255)
T ss_pred             CCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCC
Confidence            357999999999998999999999999999999999998 999999999999999999986532 1111    1  1345


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +..+|+|+++.+++++++.+.+.+|..+..+|+
T Consensus       217 ~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            678999999999999998888888888887777

>PRK05599 hypothetical protein; Provisional

Probab=99.55  E-value=1.4e-14  Score=123.97  Aligned_cols=86  Identities=22%  Similarity=0.286  Sum_probs=74.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|+|.....+.     ....+||++
T Consensus       129 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~-----~~~~~pe~~  203 (246)
T PRK05599        129 PAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA-----PMSVYPRDV  203 (246)
T ss_pred             CCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-----CCCCCHHHH
Confidence            58999999999999999999999999999999999998 999999999999999999986432211     113589999


Q ss_pred             HHHHHHhhcCCC
Q 023465           86 VKGAFELITDES   97 (282)
Q Consensus        86 a~~~~~l~~~~~   97 (282)
                      ++.++++++...
T Consensus       204 a~~~~~~~~~~~  215 (246)
T PRK05599        204 AAAVVSAITSSK  215 (246)
T ss_pred             HHHHHHHHhcCC
Confidence            999999998754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=8.4e-15  Score=124.08  Aligned_cols=106  Identities=25%  Similarity=0.263  Sum_probs=90.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~   76 (282)
                      +.|+||++||.++..+.++...|+++|+++++|+++++. +.++||+||+|+||+++|++.....  ...      ..++
T Consensus       118 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  197 (235)
T PRK06550        118 KSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPI  197 (235)
T ss_pred             CCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCc
Confidence            358999999999998889999999999999999999998 9999999999999999999853211  111      1145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++.+|+|+++.++|++++.+...+|..+..+|++
T Consensus       198 ~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        198 KRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             CCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            66789999999999999988888888888888875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.54  E-value=2.1e-14  Score=123.37  Aligned_cols=106  Identities=25%  Similarity=0.228  Sum_probs=89.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKFI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~~   73 (282)
                      .+|+||++||..+..+.++...|++||+++++|+|+++. +.++||+||+|.||+++|++.....           .+..
T Consensus       131 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  210 (257)
T PRK07067        131 RGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKK  210 (257)
T ss_pred             CCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHH
Confidence            347999999999988999999999999999999999998 9999999999999999999854321           0111


Q ss_pred             ------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 ------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                            .++.++.+|+|+++.++||+++.+.+.+|..+..+++.
T Consensus       211 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  254 (257)
T PRK07067        211 RLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGN  254 (257)
T ss_pred             HHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCE
Confidence                  14567889999999999999998888888888878773

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-14  Score=123.88  Aligned_cols=106  Identities=22%  Similarity=0.325  Sum_probs=90.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~   76 (282)
                      +.|+||++||..+..+.++...|+++|+++++|+++++. ++++||+||+|+||+++|++.....  +..      ..++
T Consensus       137 ~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T PRK07523        137 GAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA  216 (255)
T ss_pred             CCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCC
Confidence            358999999999988899999999999999999999998 9999999999999999999864321  111      1145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++.+|+|+++.++||+++++.+.+|..+..+++.
T Consensus       217 ~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        217 GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCe
Confidence            67889999999999999998888888888888875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.53  E-value=7.7e-15  Score=119.66  Aligned_cols=90  Identities=38%  Similarity=0.604  Sum_probs=75.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc---ccCCCcEEEEEeCCcccCcchhhhhH---------HHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQTEMGLKVAS---------KFI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~---~~~~gI~v~~i~PG~v~T~~~~~~~~---------~~~   73 (282)
                      .+|-|||+||.+|+.|.|-.++|++|||++.+|||+|+.   +.+.|||+|++|||+++|++.....+         ++.
T Consensus       128 ~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~  207 (261)
T KOG4169|consen  128 KGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIK  207 (261)
T ss_pred             CCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHH
Confidence            578999999999999999999999999999999999985   66789999999999999999765522         222


Q ss_pred             hhh--CCCCCHHHHHHHHHHhhcC
Q 023465           74 DLM--GGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        74 ~~~--~~~~~~~~~a~~~~~l~~~   95 (282)
                      +.+  ....+|.+++..++.+++.
T Consensus       208 ~~l~~~~~q~~~~~a~~~v~aiE~  231 (261)
T KOG4169|consen  208 EALERAPKQSPACCAINIVNAIEY  231 (261)
T ss_pred             HHHHHcccCCHHHHHHHHHHHHhh
Confidence            222  2357899999999999987

>PRK09242 tropinone reductase; Provisional

Probab=99.52  E-value=2.8e-14  Score=122.61  Aligned_cols=108  Identities=22%  Similarity=0.301  Sum_probs=89.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH----H--hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF----I--DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~----~--~~~   76 (282)
                      +.|+||++||.++..+.+..+.|++||+++++|+++++. +.++||++|+|+||+++|++.....  ++.    .  .+.
T Consensus       138 ~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T PRK09242        138 ASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM  217 (257)
T ss_pred             CCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC
Confidence            358999999999999999999999999999999999998 9999999999999999999864321  111    1  134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+..+|+++++++++++++.+.+.+|..+..+++...
T Consensus       218 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        218 RRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCeEe
Confidence            5678999999999999998777778888887877543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.52  E-value=4.3e-14  Score=119.91  Aligned_cols=103  Identities=17%  Similarity=0.083  Sum_probs=83.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHHH--HhhhCCCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASKF--IDLMGGFVP   81 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~~--~~~~~~~~~   81 (282)
                      .|+||++||..+..+.++...|++||+|+++|+++++. +++ +||||+|+||++.|+.....  ....  ..++.+..+
T Consensus       127 ~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (236)
T PRK06483        127 ASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPG  205 (236)
T ss_pred             CceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCHHHHHHHhccCccccCCC
Confidence            47999999999888889999999999999999999998 877 49999999999988653211  1111  114566789


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           82 MEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      |+|+++.+.||++  +.+.+|..+..||++.
T Consensus       206 ~~~va~~~~~l~~--~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        206 EEEIIDLVDYLLT--SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HHHHHHHHHHHhc--CCCcCCcEEEeCcccc
Confidence            9999999999997  4578888888888753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.52  E-value=3.5e-14  Score=122.71  Aligned_cols=106  Identities=22%  Similarity=0.246  Sum_probs=89.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------HHH---
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------KFI---   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------~~~---   73 (282)
                      +.|+||++||..+..+.+....|++||+++++|+++++. +.++||+||+|+||+++|++......        .+.   
T Consensus       137 ~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (265)
T PRK07097        137 GHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFI  216 (265)
T ss_pred             CCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHH
Confidence            458999999999988889999999999999999999999 99999999999999999997643211        111   


Q ss_pred             ---hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 ---DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ---~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                         .+..++.+|+|+++.+++++++.+...+|..+..++++
T Consensus       217 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        217 IAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence               13456789999999999999988888888888778774

>PLN02253 xanthoxin dehydrogenase

Probab=99.51  E-value=2.5e-14  Score=124.52  Aligned_cols=107  Identities=27%  Similarity=0.333  Sum_probs=88.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HH----HHh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SK----FID   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~----~~~   74 (282)
                      +.|+||+++|.++..+.++...|++||+|+++|+++++. +.++||+||+|+||+++|++.....      ..    +..
T Consensus       146 ~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (280)
T PLN02253        146 KKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA  225 (280)
T ss_pred             CCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH
Confidence            358999999999988888888999999999999999998 9999999999999999998742110      00    000


Q ss_pred             ------hh-CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 ------LM-GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 ------~~-~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                            ++ .+..+|+|++++++|++++.+.+.+|..+..+|++.
T Consensus       226 ~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        226 FAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFT  270 (280)
T ss_pred             HhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchh
Confidence                  11 234789999999999999988888998888888853

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.51  E-value=8.3e-14  Score=120.49  Aligned_cols=106  Identities=18%  Similarity=0.191  Sum_probs=86.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcc--hhhhhHHHHh--hhC-CCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM--GLKVASKFID--LMG-GFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~--~~~~~~~~~~--~~~-~~~   80 (282)
                      .++|++++|..+..+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|+.  .......+..  ++. +..
T Consensus       152 ~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (267)
T TIGR02685       152 NLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREA  231 (267)
T ss_pred             CeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCC
Confidence            47899999999988889999999999999999999998 99999999999999987653  2211111111  232 567


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +|+++++.++|++++.+.+.+|..+..++++.
T Consensus       232 ~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       232 SAEQIADVVIFLVSPKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             CHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence            99999999999999988888998888888753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02415 23BDH acetoin reductases

Probab=99.51  E-value=5.9e-14  Score=120.21  Aligned_cols=107  Identities=28%  Similarity=0.224  Sum_probs=90.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-------------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-------------   71 (282)
                      ..|+||++||..+..+.+....|++||+++++|++.++. +.+.||+|+.|+||+++|++.......             
T Consensus       128 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~  207 (254)
T TIGR02415       128 HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGF  207 (254)
T ss_pred             CCeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHH
Confidence            348999999999999999999999999999999999998 999999999999999999986443211             


Q ss_pred             --HH--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 --FI--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 --~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        +.  .+.++..+|+++++++.||+++.+...+|.++..|++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       208 EEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGMV  252 (254)
T ss_pred             HHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCcc
Confidence              11  123567899999999999999988888899998888753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.51  E-value=4.7e-14  Score=121.59  Aligned_cols=107  Identities=28%  Similarity=0.346  Sum_probs=89.3

Q ss_pred             CCcEEEEEcCCCc-cCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--------HHHH--
Q 023465            6 KPGVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--------SKFI--   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~-~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--------~~~~--   73 (282)
                      +.++||++||..+ ..+.++...|+++|+++++|+++++. +.+.||+||+|+||+++|+|.....        ++..  
T Consensus       132 ~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~  211 (263)
T PRK08226        132 KDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTE  211 (263)
T ss_pred             CCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHH
Confidence            3579999999887 45678889999999999999999998 9999999999999999999864321        1111  


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                          .++.+..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       212 ~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        212 MAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             HhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcc
Confidence                134567899999999999999988899999988899864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.50  E-value=7.3e-14  Score=120.19  Aligned_cols=103  Identities=28%  Similarity=0.304  Sum_probs=82.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-------------hHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-------------ASK   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-------------~~~   71 (282)
                      +.|+||++||.++.  .+....|++||+|+++|+++++. ++++||+||+|+||+++|++....             .++
T Consensus       135 ~~g~iv~~sS~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T PRK12823        135 GGGAIVNVSSIATR--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQ  212 (260)
T ss_pred             CCCeEEEEcCcccc--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHH
Confidence            35899999998764  23557899999999999999998 999999999999999999863110             001


Q ss_pred             H------HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           72 F------IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        72 ~------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +      ..++.+..+|+|++++++||+++.+.+.+|..+..+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        213 IVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             HHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            1      11456678999999999999999888888877777765

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.50  E-value=3e-13  Score=114.48  Aligned_cols=133  Identities=19%  Similarity=0.175  Sum_probs=96.8

Q ss_pred             CCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCccc----CCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEe
Q 023465          145 QLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAG----FEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTM  219 (282)
Q Consensus       145 p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~  219 (282)
                      ..+++++||||..+ +..+..........+...-.|+.+|    ..++|+|++.  +-+++++||.|.+..  +|.||.+
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~--gWeeysi  108 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV--GWEEYSV  108 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--cceEEEE
Confidence            34688999999999 3333221111100000012233333    3788999995  568899999999886  9999999


Q ss_pred             ecCCCe--eeCCC-----ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          220 VPSKHI--LPVAR-----PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       220 v~~~~~--~~~p~-----~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++....  +++|.     .+.-...+..+++|||..+ +....++|++|+|.||+|++|+++.|+||.++
T Consensus       109 i~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~G  178 (343)
T KOG1196|consen  109 ITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMG  178 (343)
T ss_pred             ecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcC
Confidence            987543  45544     2456677889999999999 67778999999999999999999999999875

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.49  E-value=7.9e-14  Score=113.92  Aligned_cols=111  Identities=18%  Similarity=0.130  Sum_probs=98.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh------h--HHHHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV------A--SKFIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~------~--~~~~~~~~   77 (282)
                      +|+||.++-..+...+|++...+.+||+|++-+|.||. ++++|||||.|+-|+++|--....      .  .+...+++
T Consensus       137 ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~  216 (259)
T COG0623         137 GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLR  216 (259)
T ss_pred             CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCcc
Confidence            68999999999999999999999999999999999999 999999999999999999654321      1  22344788


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTS  117 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~p  117 (282)
                      +..++||+.+..+||+|+-++..||..+++|++.+.+.++
T Consensus       217 r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~~m~  256 (259)
T COG0623         217 RNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             CCCCHHHhhhhHHHHhcchhcccccceEEEcCCceeeccC
Confidence            9999999999999999999999999999999998876554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.49  E-value=1.2e-13  Score=117.84  Aligned_cols=106  Identities=23%  Similarity=0.273  Sum_probs=90.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+||++||..+..+.++...|+++|+++++|+++++. +.++||++|+|+||+++|++.....++..      .+..+
T Consensus       131 ~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (246)
T PRK12938        131 GWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRR  210 (246)
T ss_pred             CCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccC
Confidence            358999999999988999999999999999999999998 99999999999999999998654322221      13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+++++++.+.||+++.+...+|..+..++++
T Consensus       211 ~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        211 LGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence            789999999999999998888888888878774

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.49  E-value=1.2e-13  Score=118.58  Aligned_cols=107  Identities=22%  Similarity=0.282  Sum_probs=90.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHHHH------hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASKFI------DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~~~------~~~   76 (282)
                      +.|+||++||..+..+.++...|++||++++++++.++. +.++||+||+|+||+++|++....  .+...      .+.
T Consensus       138 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T PRK06124        138 GYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL  217 (256)
T ss_pred             CCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCC
Confidence            358999999999999999999999999999999999998 988999999999999999975322  11111      134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++.+|+|+++.+++|+++.+.+.+|..+..++++.
T Consensus       218 ~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        218 GRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            567899999999999999998888998888888753

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.1e-13  Score=118.88  Aligned_cols=105  Identities=30%  Similarity=0.388  Sum_probs=89.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-H----HHHh--hhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-S----KFID--LMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~----~~~~--~~~~   78 (282)
                      .|+||++||..+..+.+....|+++|++++.|++.++. +.++||+||+|+||+++|++..... .    ....  +..+
T Consensus       145 ~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T PRK06949        145 GGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKR  224 (258)
T ss_pred             CeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCC
Confidence            47999999999988888899999999999999999998 9889999999999999999864321 1    1111  3467


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.+.||+++.+.+.+|..+..||++
T Consensus       225 ~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        225 VGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             CcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            889999999999999998889999998888875

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.48  E-value=1.2e-13  Score=117.16  Aligned_cols=106  Identities=17%  Similarity=0.177  Sum_probs=85.7

Q ss_pred             CCCcEEEEEcCCCccC---CCCCChhhHhhHHHHHHHHHHhcc-ccC--CCcEEEEEeCCcccCcchhhhhHHHHhhhCC
Q 023465            5 KKPGVIINMGSSAGLY---PMYNDPIYSASKGGVVLFTRSLTP-YKR--KGIRINVLCPEFVQTEMGLKVASKFIDLMGG   78 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~---~~~~~~~Y~asKaal~~~t~~la~-~~~--~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~   78 (282)
                      ++.++|+++||..+..   +.+.+..|++||+++++|+++|+. +.+  .+|+||+|+||+++|+|......  ..+..+
T Consensus       122 ~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~  199 (235)
T PRK09009        122 SESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ--NVPKGK  199 (235)
T ss_pred             cCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh--ccccCC
Confidence            3357999999876643   346678999999999999999998 776  69999999999999999754321  123455


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+||++++.+++++++.....+|..+..+|++.
T Consensus       200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        200 LFTPEYVAQCLLGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             CCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence            7899999999999999988788888888888764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=1.2e-13  Score=122.05  Aligned_cols=104  Identities=26%  Similarity=0.217  Sum_probs=85.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---HHhhhCCCCCH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---FIDLMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---~~~~~~~~~~~   82 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. +.++||+||+|+||. .|+|.......   .........+|
T Consensus       147 ~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~p  225 (306)
T PRK07792        147 YGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSP  225 (306)
T ss_pred             CcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCH
Confidence            47999999999998889999999999999999999998 999999999999994 88886432111   11111234689


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++++.+.||+++.+.+.+|..+..+|+.
T Consensus       226 e~va~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        226 EHVVPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence            99999999999998888888888878775

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.48  E-value=1.1e-13  Score=118.37  Aligned_cols=106  Identities=22%  Similarity=0.276  Sum_probs=89.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------------   70 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------------   70 (282)
                      +.|+||++||..+..+.++...|++||+++++|+++++. +.++||+||+|.||+++|++......              
T Consensus       126 ~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  205 (252)
T PRK08220        126 RSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPE  205 (252)
T ss_pred             CCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHH
Confidence            358999999999988888999999999999999999998 99999999999999999997543210              


Q ss_pred             HH--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           71 KF--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        71 ~~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..  ..++.++.+|+|+++.+++|+++.+.+.+|..+..+++.
T Consensus       206 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        206 QFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            00  113457889999999999999998888999888888874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.47  E-value=1.1e-13  Score=130.91  Aligned_cols=109  Identities=28%  Similarity=0.375  Sum_probs=90.6

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-------HHH--h
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-------KFI--D   74 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-------~~~--~   74 (282)
                      +.+++|||+||.++..+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|++......       ...  .
T Consensus       131 ~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  210 (520)
T PRK06484        131 GHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRI  210 (520)
T ss_pred             CCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcC
Confidence            3335999999999999999999999999999999999998 99999999999999999998653211       111  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+..+|+++++.++|++++.+...+|..+..++++..
T Consensus       211 ~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~~  249 (520)
T PRK06484        211 PLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGWTV  249 (520)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCeec
Confidence            334567999999999999999888888888888877543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.46  E-value=2.3e-13  Score=117.05  Aligned_cols=107  Identities=20%  Similarity=0.115  Sum_probs=87.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcc-cCcchhhhh-----------HHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV-QTEMGLKVA-----------SKFI   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v-~T~~~~~~~-----------~~~~   73 (282)
                      .|+||++||.++..+.+....|++||+|+++++++++. ++++||+||+|.||.+ .|++.....           ++..
T Consensus       133 ~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (259)
T PRK12384        133 QGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVE  212 (259)
T ss_pred             CcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHH
Confidence            47999999998888888889999999999999999998 9999999999999975 777643211           1111


Q ss_pred             ------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 ------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                            .++.++.+++|+++++++++++.+.+.+|..+..+++...
T Consensus       213 ~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        213 QYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence                  1446788999999999999998877778888877777543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=2.9e-13  Score=116.29  Aligned_cols=106  Identities=27%  Similarity=0.313  Sum_probs=88.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHHH--hhhCCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKFI--DLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~~--~~~~~~~~   81 (282)
                      ..|+||++||..+..+.++...|++||+++++|+++++. +...||+||+|+||+++|++..... ....  .+..+..+
T Consensus       145 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T PRK12748        145 AGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGE  224 (256)
T ss_pred             CCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcC
Confidence            358999999999888888999999999999999999998 9899999999999999999754221 1111  12345678


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           82 MEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+++++.++|++++.+...+|..+..|+++
T Consensus       225 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        225 PVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            999999999999998877788888888774

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.45  E-value=2.9e-13  Score=115.54  Aligned_cols=104  Identities=23%  Similarity=0.268  Sum_probs=85.0

Q ss_pred             CcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh--hhHH-----HHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK--VASK-----FIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~--~~~~-----~~~~~~   77 (282)
                      .|+||++||.++..+.+. ...|++||+++++|+++++. +.++||+|+.|.||+++|++...  ..+.     ...++.
T Consensus       135 ~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (248)
T PRK06947        135 GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLG  214 (248)
T ss_pred             CcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCC
Confidence            578999999998877664 57899999999999999998 99999999999999999998532  1111     111345


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +..++|++++.+++++++.+.+.+|.++..+++
T Consensus       215 ~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        215 RAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            567999999999999999888888888877664

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.7e-13  Score=117.78  Aligned_cols=100  Identities=19%  Similarity=0.298  Sum_probs=84.1

Q ss_pred             CCcEEEEEcCCCccCCC--CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCC-cccCcchhhhhHHHHhhhCCCCC
Q 023465            6 KPGVIINMGSSAGLYPM--YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE-FVQTEMGLKVASKFIDLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~--~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~~   81 (282)
                      +.|+|+++||..+..+.  ++...|++||+|+++|+++++. +.++||+||+|+|| +++|++....... ...+.+..+
T Consensus       140 ~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-~~~~~~~~~  218 (273)
T PRK08278        140 ENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-DEAMRRSRT  218 (273)
T ss_pred             CCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-cccccccCC
Confidence            35899999998887776  8889999999999999999998 99999999999999 6899876543211 223456789


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           82 MEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      |+++++.+++++++.+...+|.++.
T Consensus       219 p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        219 PEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             HHHHHHHHHHHhcCccccceeEEEe
Confidence            9999999999999988888888875

>PRK07069 short chain dehydrogenase; Validated

Probab=99.44  E-value=3.1e-13  Score=115.51  Aligned_cols=107  Identities=23%  Similarity=0.294  Sum_probs=87.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCC--CcEEEEEeCCcccCcchhhhhH-----HH-H---
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRK--GIRINVLCPEFVQTEMGLKVAS-----KF-I---   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~--gI~v~~i~PG~v~T~~~~~~~~-----~~-~---   73 (282)
                      +.|+||++||.++..+.++...|+++|++++.|+|+++. +.++  +|+||+|+||+++|++......     +. .   
T Consensus       129 ~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (251)
T PRK07069        129 QPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA  208 (251)
T ss_pred             CCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHh
Confidence            358999999999998899999999999999999999998 7665  5999999999999998643211     11 0   


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        .+..+..+|+++++.+++++++.+.+.+|..+..+++..
T Consensus       209 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~~  249 (251)
T PRK07069        209 RGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGIC  249 (251)
T ss_pred             ccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCee
Confidence              123456799999999999999888888888887777743

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.44  E-value=4.4e-13  Score=117.51  Aligned_cols=105  Identities=28%  Similarity=0.232  Sum_probs=88.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HH----HH--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SK----FI--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~----~~--~~~~~   78 (282)
                      .|+||++||.++..+.+....|++||+|+++|+++++. +.++||+||+|+||+++|++..... ++    +.  .++.+
T Consensus       174 ~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~  253 (290)
T PRK06701        174 GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQR  253 (290)
T ss_pred             CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCC
Confidence            47999999999988889999999999999999999998 9899999999999999999764321 11    11  13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.+++|+++.+++++++.+.+.+|..+..+++.
T Consensus       254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        254 PGQPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            789999999999999998888888888777764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.43  E-value=3.9e-13  Score=115.51  Aligned_cols=107  Identities=21%  Similarity=0.297  Sum_probs=87.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHHH----h-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKFI----D-   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~~----~-   74 (282)
                      .|+|+++||..+..+.++...|++||+++++|+++++. +.++||+||+|.||.++|++.....      .+..    . 
T Consensus       132 ~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  211 (258)
T PRK08628        132 RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK  211 (258)
T ss_pred             CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc
Confidence            48999999999998889999999999999999999998 8899999999999999999854211      1111    1 


Q ss_pred             -hh-CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 -LM-GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 -~~-~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                       +. .+..+|+++++.+++++++.+...+|..+..+++...
T Consensus       212 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  252 (258)
T PRK08628        212 IPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVH  252 (258)
T ss_pred             CCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCccc
Confidence             22 2578999999999999999877777877777777543

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.43  E-value=8.3e-13  Score=112.40  Aligned_cols=105  Identities=21%  Similarity=0.204  Sum_probs=88.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH----H--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF----I--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~----~--~~~~~   78 (282)
                      .|+||++||.++..+.+....|+++|++++.|+++++. +.+.||++|+|+||+++|+|.... .++.    .  .++.+
T Consensus       132 ~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  211 (245)
T PRK12937        132 GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLER  211 (245)
T ss_pred             CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCC
Confidence            47999999999988999999999999999999999998 999999999999999999985321 1111    1  13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+++++++.++|++++.+.+.+|..+..++++
T Consensus       212 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        212 LGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             CCCHHHHHHHHHHHcCccccCccccEEEeCCCC
Confidence            789999999999999988888888888777764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.43  E-value=5.3e-13  Score=113.56  Aligned_cols=107  Identities=25%  Similarity=0.337  Sum_probs=90.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.++||++||..+..+.++...|++||+|+++|+++++. +.+.||+++.++||+++|++.....+...      .++..
T Consensus       130 ~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  209 (245)
T PRK12824        130 GYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKR  209 (245)
T ss_pred             CCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCC
Confidence            458999999999988889999999999999999999998 98999999999999999998654332211      13455


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+++++++.+.+++++.+...+|..+..+++..
T Consensus       210 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        210 LGTPEEIAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            7799999999999998877778888888888753

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.42  E-value=4.5e-13  Score=113.99  Aligned_cols=106  Identities=25%  Similarity=0.293  Sum_probs=88.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.++||++||.++..+.+....|+++|+|+.+|++.++. +.+.||++|+|+||+++|++.....+...      .+..+
T Consensus       130 ~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  209 (245)
T PRK12936        130 RYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKR  209 (245)
T ss_pred             CCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCC
Confidence            358999999999999999999999999999999999998 88899999999999999998654322211      13455


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+++++.+.+++++...+.+|..+..+++.
T Consensus       210 ~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        210 MGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            778999999999999887777788777777774

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2.9e-13  Score=114.52  Aligned_cols=90  Identities=19%  Similarity=0.179  Sum_probs=69.7

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      ++++|+|||+||..+.   ++...|++||+|+++|+|+|+. +.++|||||+|+||+++|+... ..+.+.+.      -
T Consensus       133 ~~~~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~-~~~~~~~~------~  202 (227)
T PRK08862        133 RNKKGVIVNVISHDDH---QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL-DAVHWAEI------Q  202 (227)
T ss_pred             cCCCceEEEEecCCCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc-CHHHHHHH------H
Confidence            3345899999997643   5678899999999999999999 9999999999999999998422 11111111      1


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEE
Q 023465           83 EMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      |+++.+..||++  +.+.+|..+
T Consensus       203 ~~~~~~~~~l~~--~~~~tg~~~  223 (227)
T PRK08862        203 DELIRNTEYIVA--NEYFSGRVV  223 (227)
T ss_pred             HHHHhheeEEEe--cccccceEE
Confidence            799999999997  456676555

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.42  E-value=3.5e-13  Score=118.50  Aligned_cols=96  Identities=16%  Similarity=0.198  Sum_probs=80.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH------HH----hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK------FI----DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~------~~----~~   75 (282)
                      .|+||++||.++..+.++...|++||+++++|+++|+. +.++||+||+|+||+++|+|.......      ..    .+
T Consensus       135 ~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p  214 (296)
T PRK05872        135 RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP  214 (296)
T ss_pred             CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc
Confidence            48999999999999999999999999999999999998 999999999999999999986542111      11    13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEE
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSC  102 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~  102 (282)
                      +.+..+|+++++.+++++++.....++
T Consensus       215 ~~~~~~~~~va~~i~~~~~~~~~~i~~  241 (296)
T PRK05872        215 LRRTTSVEKCAAAFVDGIERRARRVYA  241 (296)
T ss_pred             ccCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence            456789999999999999987765543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=5.2e-13  Score=124.09  Aligned_cols=104  Identities=22%  Similarity=0.230  Sum_probs=88.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH---HHH---hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS---KFI---DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~---~~~---~~~~~~   79 (282)
                      .|+||++||.++..+.+++..|+++|+++++|+++++. +.++||++|+|+||+++|+|......   +..   ..+.+.
T Consensus       335 ~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~  414 (450)
T PRK08261        335 GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQG  414 (450)
T ss_pred             CCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCC
Confidence            48999999999998999999999999999999999998 99999999999999999998754321   111   134556


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..|+|+++.+.||+++.+.+.+|..+..+|+
T Consensus       415 ~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        415 GLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             CCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            7899999999999999888888888877776

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=2.3e-13  Score=116.66  Aligned_cols=65  Identities=34%  Similarity=0.408  Sum_probs=57.7

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCC--cEEEEEeCCcccCcchhh
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKG--IRINVLCPEFVQTEMGLK   67 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~g--I~v~~i~PG~v~T~~~~~   67 (282)
                      |++++ .|+||+|||++|..+.|..+.|+|||+||.+|+++|+. +...+  |++ +|+||+|+|+|...
T Consensus       137 m~~r~-~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  137 MKKRN-DGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             hhhcC-CCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            44444 69999999999999999999999999999999999998 88876  666 99999999998643

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.41  E-value=7.1e-13  Score=108.22  Aligned_cols=95  Identities=25%  Similarity=0.281  Sum_probs=80.0

Q ss_pred             CcEEEEEcCCCccCC---CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            7 PGVIINMGSSAGLYP---MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~---~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      ++.|||+||.++..+   ...+.+|..||+|++.|+|+++. +++++|-|..+|||||+|+|...         ....++
T Consensus       147 raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~---------~a~ltv  217 (249)
T KOG1611|consen  147 RAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK---------KAALTV  217 (249)
T ss_pred             ceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC---------Ccccch
Confidence            468999999888643   34578999999999999999998 99999999999999999999863         235789


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      |+.+..++..+..-....+|.++..|+.
T Consensus       218 eeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  218 EESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             hhhHHHHHHHHHhcCcccCcceEccCCC
Confidence            9999999988888777788888865543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.41  E-value=5.2e-13  Score=113.51  Aligned_cols=99  Identities=20%  Similarity=0.149  Sum_probs=82.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCC-CcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRK-GIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~-gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +.++|+++||..+..+.++...|++||+|+++|+++++. +.++ +||||+|.||+++|++.....+..  ...+..+++
T Consensus       138 ~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~  215 (239)
T PRK08703        138 PDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGE--AKSERKSYG  215 (239)
T ss_pred             CCCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCC--CccccCCHH
Confidence            358999999999998999999999999999999999998 8776 699999999999999864332111  112457999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEe
Q 023465           84 MVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      ++++.++|++++.+...+|..+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        216 DVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             HHHHHHHHHhCccccCcCCeEee
Confidence            99999999999989888887663

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.41  E-value=7.7e-13  Score=114.34  Aligned_cols=107  Identities=21%  Similarity=0.261  Sum_probs=88.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc-Ccchhhhh--HH----HH--hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ-TEMGLKVA--SK----FI--DLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~~~--~~----~~--~~~   76 (282)
                      +|+||++||.++..+.++...|++||+|+++|+++++. +..+||+||+|+||+++ |+......  ..    ..  .++
T Consensus       136 ~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~  215 (264)
T PRK07576        136 GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPL  215 (264)
T ss_pred             CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCC
Confidence            48999999999988899999999999999999999998 99999999999999997 66432211  01    11  134


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+..+|+|+++.+++++++.+.+.+|..+..++++..
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        216 KRNGTKQDIANAALFLASDMASYITGVVLPVDGGWSL  252 (264)
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCccc
Confidence            5678999999999999998777888989888888643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.40  E-value=1.1e-12  Score=113.17  Aligned_cols=108  Identities=18%  Similarity=0.176  Sum_probs=86.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHHHH------hh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASKFI------DL   75 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~~~------~~   75 (282)
                      ++.|+||++||.++..+.++...|++||+++++|+++++. +.+ +|++|+|+||+++|++....  ..++.      .+
T Consensus       137 ~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (263)
T PRK07814        137 SGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATP  215 (263)
T ss_pred             cCCeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC
Confidence            3458999999999998999999999999999999999998 876 59999999999999975421  11111      13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.+..+++|+++.++|++++.+...+|..+..+++...
T Consensus       216 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        216 LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            34567999999999999988777777777777776533

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.40  E-value=6.9e-13  Score=113.30  Aligned_cols=106  Identities=23%  Similarity=0.202  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH------hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI------DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~------~~~   76 (282)
                      +.|+||++||..+..+.+....|++||++++.|+++++. +.++||++|+|+||+++|++.....  .+..      .+.
T Consensus       132 ~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  211 (250)
T PRK08063        132 GGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPA  211 (250)
T ss_pred             CCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCC
Confidence            458999999998888888899999999999999999998 9899999999999999999864321  1111      123


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++..+++|+++.+++++++.....+|..+..+++.
T Consensus       212 ~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        212 GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            45789999999999999887777777777777764

>PRK05717 oxidoreductase; Validated

Probab=99.40  E-value=1e-12  Score=112.88  Aligned_cols=104  Identities=21%  Similarity=0.244  Sum_probs=85.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HH------HHhhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SK------FIDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~------~~~~~~~   78 (282)
                      .|+||++||..+..+.++...|++||+|+++|++.++. +.. +|+||+|+||+++|++..... ..      ...+.++
T Consensus       136 ~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T PRK05717        136 NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGR  214 (255)
T ss_pred             CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCC
Confidence            48999999999998999999999999999999999998 766 499999999999998753211 11      1124467


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.+++++++.+.+.+|..+..+++.
T Consensus       215 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        215 VGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence            789999999999999887777788777777764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.40  E-value=9.1e-13  Score=113.31  Aligned_cols=104  Identities=25%  Similarity=0.279  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHHH-----
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKFI-----   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~~-----   73 (282)
                      .|++|++||.++..+.++...|+++|+++++|+++++. +...+|+||+|+||+++|++.....       ..+.     
T Consensus       136 ~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T PRK06198        136 EGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA  215 (260)
T ss_pred             CCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhc
Confidence            48999999999988888899999999999999999998 8899999999999999998743211       1111     


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                       .++.+..+++++++.+++++++.+...+|..+..+++
T Consensus       216 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        216 TQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             cCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence             1245568999999999999998887888888877766

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.39  E-value=5.4e-13  Score=118.54  Aligned_cols=85  Identities=29%  Similarity=0.373  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCCccC-C-CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            6 KPGVIINMGSSAGLY-P-MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      +.|+|||+||.++.. + .|+.+.|++||+|+++|+++|+. ++++||+|++|+||+++|+|......    . ....+|
T Consensus       184 ~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~----~-~~~~~p  258 (320)
T PLN02780        184 KKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS----S-FLVPSS  258 (320)
T ss_pred             CCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC----C-CCCCCH
Confidence            358999999999864 3 58899999999999999999998 99999999999999999998652110    0 114689


Q ss_pred             HHHHHHHHHhhcC
Q 023465           83 EMVVKGAFELITD   95 (282)
Q Consensus        83 ~~~a~~~~~l~~~   95 (282)
                      |++|+.++..+..
T Consensus       259 ~~~A~~~~~~~~~  271 (320)
T PLN02780        259 DGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1e-12  Score=111.89  Aligned_cols=105  Identities=26%  Similarity=0.339  Sum_probs=88.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--h----HHHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--A----SKFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~----~~~~--~~~~   77 (282)
                      .|+||++||..+..+.+....|++||++++.++++++. +.+.||++++|+||+++|++....  .    ..+.  .+..
T Consensus       129 ~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  208 (245)
T PRK07060        129 GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLG  208 (245)
T ss_pred             CcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCC
Confidence            47999999999988889999999999999999999998 888999999999999999985321  0    1111  1335


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+++|+++.+++++++.+...+|..+..++++
T Consensus       209 ~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        209 RFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            6789999999999999988888888888888875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.39  E-value=1.6e-12  Score=111.79  Aligned_cols=106  Identities=31%  Similarity=0.387  Sum_probs=86.5

Q ss_pred             CCcEEEEEcCCCccCCCCC----ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------
Q 023465            6 KPGVIINMGSSAGLYPMYN----DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~----~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------   74 (282)
                      +.++||++||..+..+.+.    ...|+++|++++.|+++++. +.++||++|.++||+++|++.....+...+      
T Consensus       140 ~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~  219 (259)
T PRK08213        140 GYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHT  219 (259)
T ss_pred             CCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcC
Confidence            4579999999887665543    48899999999999999998 999999999999999999986543322211      


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..+..+++++++.+.+++++.+...+|..+..+++.
T Consensus       220 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        220 PLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            3345678999999999999998888888888878764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.39  E-value=1.3e-12  Score=112.11  Aligned_cols=106  Identities=21%  Similarity=0.264  Sum_probs=82.9

Q ss_pred             CCcEEEEEcCCCccCCC----------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh
Q 023465            6 KPGVIINMGSSAGLYPM----------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~----------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~   74 (282)
                      +.|+||++||.++..+.          .....|++||+++++|+++++. +.++||+||.|+||++.|+........+..
T Consensus       136 ~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~  215 (256)
T PRK09186        136 GGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK  215 (256)
T ss_pred             CCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHh
Confidence            35799999998775431          1224799999999999999998 999999999999999987753322222221


Q ss_pred             --hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 --LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 --~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        +..+..+|+|+++.+++++++.+.+.+|..+..++++
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        216 CCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             cCCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence              2346789999999999999988888888888878774

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.5e-12  Score=106.26  Aligned_cols=92  Identities=17%  Similarity=0.122  Sum_probs=75.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      .|+|+++||..+..+.++...|++||+|+++|+++|+. + ++||+||+|+||+++|++....  .. .+.....+|+++
T Consensus       104 ~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--~~-~~~~~~~~~~~~  179 (199)
T PRK07578        104 GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYG--PF-FPGFEPVPAARV  179 (199)
T ss_pred             CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhh--hc-CCCCCCCCHHHH
Confidence            47999999999998999999999999999999999998 9 8999999999999999975321  10 122346799999


Q ss_pred             HHHHHHhhcCCCCceEEEEE
Q 023465           86 VKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        86 a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ++.++++++.   ..+|..+
T Consensus       180 a~~~~~~~~~---~~~g~~~  196 (199)
T PRK07578        180 ALAYVRSVEG---AQTGEVY  196 (199)
T ss_pred             HHHHHHHhcc---ceeeEEe
Confidence            9999999863   3455444

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.1e-12  Score=116.98  Aligned_cols=93  Identities=24%  Similarity=0.187  Sum_probs=75.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCC-CcEEEEEeCCcccCcchhhhhHHH---HhhhCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRK-GIRINVLCPEFVQTEMGLKVASKF---IDLMGGFV   80 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~-gI~v~~i~PG~v~T~~~~~~~~~~---~~~~~~~~   80 (282)
                      +.|+|||++|..+..+.|+.+.|++||+|+++|+++|+. +.++ ||+||+|+||+++|++........   ..+.....
T Consensus       134 ~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~  213 (330)
T PRK06139        134 GHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVY  213 (330)
T ss_pred             CCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCC
Confidence            358999999999999999999999999999999999998 8774 999999999999999864321111   11223467


Q ss_pred             CHHHHHHHHHHhhcCCCC
Q 023465           81 PMEMVVKGAFELITDESK   98 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~   98 (282)
                      +||++|+.+++++.....
T Consensus       214 ~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        214 DPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            999999999999876543

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2e-12  Score=110.32  Aligned_cols=104  Identities=27%  Similarity=0.260  Sum_probs=83.3

Q ss_pred             CcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~------~~~~~   77 (282)
                      .|+||++||.++..+.++ ...|++||+++++|+++++. +.++||+||+|+||++.|++.... .+..      ..++.
T Consensus       135 ~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~  214 (248)
T PRK06123        135 GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG  214 (248)
T ss_pred             CeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC
Confidence            479999999998888776 46799999999999999998 999999999999999999975321 1111      11445


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +..+|+|+++++++++++...+.+|..+..+++
T Consensus       215 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        215 RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            567899999999999998777777766665553

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.6e-12  Score=110.90  Aligned_cols=105  Identities=25%  Similarity=0.367  Sum_probs=88.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-H----HH--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-K----FI--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-~----~~--~~~~~   78 (282)
                      .|++|++||..+..+.+....|+++|++++.++++++. +.+.+|++++|+||+++|++...... .    ..  .+..+
T Consensus       135 ~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  214 (250)
T PRK12939        135 RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALER  214 (250)
T ss_pred             CeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCC
Confidence            58999999999988889999999999999999999998 98899999999999999998643221 1    11  13455


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+++|+++.+++++++.....+|..+..+|+.
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        215 LQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            789999999999999887777888888888874

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.3e-12  Score=112.07  Aligned_cols=106  Identities=29%  Similarity=0.400  Sum_probs=86.3

Q ss_pred             CCcEEEEEcCCCccCCC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----HHHHh-----
Q 023465            6 KPGVIINMGSSAGLYPM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----SKFID-----   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----~~~~~-----   74 (282)
                      +.|+||++||..+..+. ++...|++||++++++++.++. +.++||+|++|+||+++|++.....    .....     
T Consensus       131 ~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~  210 (255)
T PRK06057        131 GKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHV  210 (255)
T ss_pred             CCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcC
Confidence            35899999998877665 4778899999999999999998 9889999999999999999864321    11111     


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..++.+|+++++.+.+++++.+...+|..+..++++
T Consensus       211 ~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        211 PMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCe
Confidence            3356789999999999999998888888888778774

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.9e-12  Score=111.33  Aligned_cols=105  Identities=21%  Similarity=0.153  Sum_probs=79.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH---------Hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF---------IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~---------~~~   75 (282)
                      .|+|++++|.......++...|++||+|+++|+++++. +.++||+||+|+||+++|++.... .++.         ..+
T Consensus       138 ~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T PRK12744        138 NGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSP  217 (257)
T ss_pred             CCCEEEEecchhcccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccc
Confidence            36788774433323567889999999999999999998 999999999999999999975321 1110         012


Q ss_pred             h--CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           76 M--GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        76 ~--~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .  .+..+|+|+++.++|++++ ..+.+|..+..++++.
T Consensus       218 ~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        218 FSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGYT  255 (257)
T ss_pred             cccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCcc
Confidence            2  2578899999999999996 5577888888888754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.37  E-value=2.8e-12  Score=109.71  Aligned_cols=102  Identities=24%  Similarity=0.348  Sum_probs=80.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhh----H------HH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVA----S------KF   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~----~------~~   72 (282)
                      ..|+||++||..+..+.++...|+++|+|+++|+|.++. ++  +.+|+||+|.||+++|++.....    +      .+
T Consensus       132 ~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK06924        132 VDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRF  211 (251)
T ss_pred             CCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHH
Confidence            357999999999988999999999999999999999987 64  57999999999999999854311    0      11


Q ss_pred             H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecC
Q 023465           73 I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNR  108 (282)
Q Consensus        73 ~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~  108 (282)
                      .  .+.++..+|+++++.+++++++. ...+|..+..+
T Consensus       212 ~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~  248 (251)
T PRK06924        212 ITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDID  248 (251)
T ss_pred             HHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehh
Confidence            1  13456889999999999999874 44555555433

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=2.5e-12  Score=109.74  Aligned_cols=107  Identities=27%  Similarity=0.330  Sum_probs=89.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----HHHh-----
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----KFID-----   74 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----~~~~-----   74 (282)
                      ++.++||++||..+..+.++...|+.||++++.|++.++. ++++||++++|+||+++|++......    +...     
T Consensus       131 ~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~  210 (251)
T PRK07231        131 EGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT  210 (251)
T ss_pred             cCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC
Confidence            3458999999999999999999999999999999999998 98889999999999999998654322    1111     


Q ss_pred             -hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 -LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 -~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       +..+..+|+|+++++++++++.+...+|.++..+|+.
T Consensus       211 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        211 IPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence             2345679999999999999888777788877777763

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.36  E-value=6.6e-13  Score=103.93  Aligned_cols=107  Identities=22%  Similarity=0.206  Sum_probs=90.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh-------hhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID-------LMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-------~~~   77 (282)
                      .+|.|||+.|.+++.+..++++|++||.|+.+||--++. ++..|||+|.|.||.++||+....+++...       ...
T Consensus       145 qrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfps  224 (260)
T KOG1199|consen  145 QRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPS  224 (260)
T ss_pred             cceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCch
Confidence            468999999999999999999999999999999999999 999999999999999999998877665433       224


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                      |.+.|.|-+..+-.+++  +.+.+|..+..||.+.+.
T Consensus       225 rlg~p~eyahlvqaiie--np~lngevir~dgalrm~  259 (260)
T KOG1199|consen  225 RLGHPHEYAHLVQAIIE--NPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             hcCChHHHHHHHHHHHh--CcccCCeEEEecceecCC
Confidence            67889998887766664  457788888888876553

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.36  E-value=2.5e-12  Score=109.14  Aligned_cols=106  Identities=24%  Similarity=0.349  Sum_probs=89.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.++||++||..+..+.++...|+++|++++.|+++++. +...||++|.++||+++|++.....+...      .+..+
T Consensus       128 ~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  207 (242)
T TIGR01829       128 GWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGR  207 (242)
T ss_pred             CCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCC
Confidence            347999999999988889999999999999999999998 88899999999999999998654322211      13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+++++.+.|+++++..+.+|..+..+|+.
T Consensus       208 ~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       208 LGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            789999999999999988777888888888774

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.36  E-value=2.4e-12  Score=112.05  Aligned_cols=93  Identities=22%  Similarity=0.227  Sum_probs=75.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH----------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI----------   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~----------   73 (282)
                      ++.|+||++||..+..+.++...|++||+++++|+++|+. +.++||+|++|+||+++|+|..+....+.          
T Consensus       125 ~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~  204 (277)
T PRK05993        125 QGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVH  204 (277)
T ss_pred             cCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchh
Confidence            3458999999999999999999999999999999999998 99999999999999999998754321100          


Q ss_pred             ------------h---hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           74 ------------D---LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        74 ------------~---~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                  .   ......+||++++.+++.+....
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        205 RAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             HHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCCC
Confidence                        0   11124689999999999987654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.36  E-value=1.9e-12  Score=123.63  Aligned_cols=96  Identities=23%  Similarity=0.357  Sum_probs=77.5

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----H----HH
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----S----KF   72 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----~----~~   72 (282)
                      +++.+|+||++||.++..+.++...|++||+|+++|+++|+. +.++||+||+|+||+++|+|.....     +    ..
T Consensus       440 ~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  519 (582)
T PRK05855        440 ERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR  519 (582)
T ss_pred             hcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhH
Confidence            334358999999999999999999999999999999999998 9999999999999999999865321     0    00


Q ss_pred             Hh-----hhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           73 ID-----LMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        73 ~~-----~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                      ..     ...+..+||++++.++++++....
T Consensus       520 ~~~~~~~~~~~~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        520 RGRADKLYQRRGYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             HhhhhhhccccCCCHHHHHHHHHHHHHcCCC
Confidence            00     112346899999999999976543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.36  E-value=2.4e-12  Score=108.83  Aligned_cols=104  Identities=23%  Similarity=0.268  Sum_probs=83.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH---H----HH--hh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS---K----FI--DL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~---~----~~--~~   75 (282)
                      +.|+||++||.. ..+.+....|++||+++++|+++++. +.++||++|+|+||+++|++.....+   .    ..  .+
T Consensus       118 ~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  196 (234)
T PRK07577        118 EQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP  196 (234)
T ss_pred             CCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC
Confidence            358999999985 45677889999999999999999998 98999999999999999998643211   1    11  12


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+..+|+++++.+++++++.....+|..+..+++
T Consensus       197 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (234)
T PRK07577        197 MRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG  231 (234)
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccceEEEecCC
Confidence            34456899999999999988777777777776665

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.35  E-value=3.2e-12  Score=109.09  Aligned_cols=105  Identities=30%  Similarity=0.336  Sum_probs=87.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh------hHHHH------
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV------ASKFI------   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~------~~~~~------   73 (282)
                      .+++|+++|.++..+.+....|++||+++++|+++++. +.++||++++|+||+++|++....      .+...      
T Consensus       129 ~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  208 (249)
T PRK06500        129 PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQAL  208 (249)
T ss_pred             CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhc
Confidence            37899999998888899999999999999999999998 889999999999999999976431      01111      


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++.+..+|+++++.+++++++.+.+.+|..+..+|+.
T Consensus       209 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        209 VPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            13456789999999999999988888888887777774

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=1.5e-12  Score=111.04  Aligned_cols=94  Identities=30%  Similarity=0.382  Sum_probs=77.2

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc----ccCCCcEEEEEeCCcccCcchhhhhHHHHhhh
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP----YKRKGIRINVLCPEFVQTEMGLKVASKFIDLM   76 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~----~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~   76 (282)
                      |+++ +.|+||+|+|++|..+.++...||+||+|+.+|.++|..    ...+||+..++||++++|.|... ... ...+
T Consensus       160 M~~~-~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~~~-~~~l  236 (300)
T KOG1201|consen  160 MLEN-NNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG-ATP-FPTL  236 (300)
T ss_pred             HHhc-CCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-CCC-Cccc
Confidence            4444 459999999999999999999999999999999999974    34678999999999999999875 111 1233


Q ss_pred             CCCCCHHHHHHHHHHhhcCCC
Q 023465           77 GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ....+|+.+|+.++..+..+.
T Consensus       237 ~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  237 APLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             cCCCCHHHHHHHHHHHHHcCC
Confidence            456899999999998876544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.34  E-value=3.2e-12  Score=111.00  Aligned_cols=107  Identities=16%  Similarity=0.142  Sum_probs=88.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H----HHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S----KFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~----~~~--~~~~   77 (282)
                      .|+|+++||.++..+.+..+.|++||++++.|++.++. +...+|++|+|+||+++|++.....  .    ...  .+..
T Consensus       138 ~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (276)
T PRK05875        138 GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLP  217 (276)
T ss_pred             CcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCC
Confidence            57999999999988888899999999999999999998 9999999999999999999864321  1    111  1334


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+++|+++.+++++++.....+|..+..+++...
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        218 RVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            567899999999999998777777877877887654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.33  E-value=5.1e-12  Score=109.59  Aligned_cols=104  Identities=24%  Similarity=0.236  Sum_probs=80.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HH----H-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SK----F-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~----~-   72 (282)
                      ..|+||++||..+..+.++...|++||+|+++|+++++. +.++||+||+|+||+++|++.....       ++    . 
T Consensus       129 ~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  208 (272)
T PRK07832        129 RGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV  208 (272)
T ss_pred             CCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH
Confidence            358999999999888899999999999999999999998 8899999999999999999864321       00    1 


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .....+..+|+++|+.+++++... ...++.-...+.+
T Consensus       209 ~~~~~~~~~~~~vA~~~~~~~~~~-~~~~~~~~~~~~~  245 (272)
T PRK07832        209 DRFRGHAVTPEKAAEKILAGVEKN-RYLVYTSPDIRAL  245 (272)
T ss_pred             HhcccCCCCHHHHHHHHHHHHhcC-CeEEecCcchHHH
Confidence            112345689999999999999643 3444443334444

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=5e-12  Score=107.96  Aligned_cols=103  Identities=26%  Similarity=0.328  Sum_probs=82.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~   78 (282)
                      ..|+|+++||.. ..+.+....|++||+|+++|+++|+. +.++||++++++||+++|++.....++..+      +..+
T Consensus       142 ~~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  220 (253)
T PRK08217        142 SKGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGR  220 (253)
T ss_pred             CCeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCC
Confidence            457899998864 46778889999999999999999998 888999999999999999987544333211      3345


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+++|+++.+.+++++  ...+|..+..++++
T Consensus       221 ~~~~~~~a~~~~~l~~~--~~~~g~~~~~~gg~  251 (253)
T PRK08217        221 LGEPEEIAHTVRFIIEN--DYVTGRVLEIDGGL  251 (253)
T ss_pred             CcCHHHHHHHHHHHHcC--CCcCCcEEEeCCCc
Confidence            67999999999999964  35677777777765

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.33  E-value=4e-12  Score=108.54  Aligned_cols=106  Identities=23%  Similarity=0.386  Sum_probs=87.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHH----Hh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKF----ID   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~----~~   74 (282)
                      +.++||++||..+..+.+....|+++|+|+++|+++++. +.+.+|+++.++||+++|++.....      .+.    ..
T Consensus       130 ~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (250)
T TIGR03206       130 GAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTR  209 (250)
T ss_pred             CCeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHh
Confidence            358999999999988899999999999999999999998 8888999999999999999764321      111    11


Q ss_pred             --hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 --LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 --~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        +.++..+++|+++.+.+++++++.+.+|..+..+++.
T Consensus       210 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       210 AIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             cCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence              2345679999999999999998888888888777763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.33  E-value=3.6e-12  Score=109.37  Aligned_cols=105  Identities=17%  Similarity=0.171  Sum_probs=86.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHHH-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKFI-   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~~-   73 (282)
                      .|+||++||..+..+.++...|+++|++++.++++++. +++++|++|+|+||++.|++.....           ++.. 
T Consensus       133 ~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  212 (258)
T PRK07890        133 GGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYA  212 (258)
T ss_pred             CCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHH
Confidence            37999999999988999999999999999999999998 9999999999999999998753211           1111 


Q ss_pred             -----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 -----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 -----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                           .++.+..+|+|+++++++++++.+.+.+|..+..+++.
T Consensus       213 ~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        213 ETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence                 13456778999999999999987777788777777764

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.33  E-value=5e-12  Score=106.69  Aligned_cols=100  Identities=17%  Similarity=0.156  Sum_probs=79.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----H----H--hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----F----I--DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~----~--~~   75 (282)
                      .|+||++||.++..+.+..+.|++||+++++|+|+++. +..  ||||+++||+++|++......+    .    .  .+
T Consensus       116 ~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  193 (230)
T PRK07041        116 GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP  193 (230)
T ss_pred             CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC
Confidence            58999999999998999999999999999999999998 765  9999999999999986432111    1    1  12


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+..+|+|+++.+++++++.  +.+|..+..+++
T Consensus       194 ~~~~~~~~dva~~~~~l~~~~--~~~G~~~~v~gg  226 (230)
T PRK07041        194 ARRVGQPEDVANAILFLAANG--FTTGSTVLVDGG  226 (230)
T ss_pred             CCCCcCHHHHHHHHHHHhcCC--CcCCcEEEeCCC
Confidence            345678999999999999853  455555555665

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.32  E-value=6.4e-12  Score=107.19  Aligned_cols=104  Identities=27%  Similarity=0.394  Sum_probs=83.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~   78 (282)
                      +.++||++||..+..+.+++..|++||+++++|+++++. +.+.||+++.++||+++|++.....+....      ...+
T Consensus       134 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  213 (247)
T PRK12935        134 EEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKR  213 (247)
T ss_pred             CCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCC
Confidence            357999999999988888999999999999999999998 888999999999999999986543222111      2345


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ...|||+++++++++++. .+.+|..+..+++
T Consensus       214 ~~~~edva~~~~~~~~~~-~~~~g~~~~i~~g  244 (247)
T PRK12935        214 FGQADEIAKGVVYLCRDG-AYITGQQLNINGG  244 (247)
T ss_pred             CcCHHHHHHHHHHHcCcc-cCccCCEEEeCCC
Confidence            789999999999999764 3556666665655

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.32  E-value=3.5e-12  Score=110.99  Aligned_cols=94  Identities=23%  Similarity=0.274  Sum_probs=75.8

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----------
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----------   72 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----------   72 (282)
                      ++.+|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+|++|+||+++|++..+.....          
T Consensus       132 ~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  211 (275)
T PRK05876        132 QGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTT  211 (275)
T ss_pred             cCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccc
Confidence            33358999999999999999999999999999999999998 9899999999999999999864321100          


Q ss_pred             ---H--hhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           73 ---I--DLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 ---~--~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                         .  .......+|+++++.++..+....
T Consensus       212 ~~~~~~~~~~~~~~~~dva~~~~~ai~~~~  241 (275)
T PRK05876        212 GSPGPLPLQDDNLGVDDIAQLTADAILANR  241 (275)
T ss_pred             cccccccccccCCCHHHHHHHHHHHHHcCC
Confidence               0  011235799999999998886543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.32  E-value=5e-12  Score=108.39  Aligned_cols=106  Identities=19%  Similarity=0.220  Sum_probs=87.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH-------hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI-------DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~-------~~~~~   78 (282)
                      .++||++||..+..+.+....|++||+++++|+++++. +.++||++++|+||+++|++.....+...       .++.+
T Consensus       139 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (256)
T PRK12745        139 HRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPR  218 (256)
T ss_pred             CcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCC
Confidence            46799999999988888999999999999999999998 88899999999999999998643222211       13445


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +.+++|+++.+.+++++.....+|..+..+++..
T Consensus       219 ~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        219 WGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             CcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            7789999999999998877677777777777743

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.32  E-value=3.1e-12  Score=109.90  Aligned_cols=88  Identities=27%  Similarity=0.275  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+||++||..+..+.++...|++||+|+++|+++|+. +.++||+|++|+||+++|++.....+     .....+|++
T Consensus       137 ~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~  211 (253)
T PRK07904        137 GFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-----APLTVDKED  211 (253)
T ss_pred             CCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-----CCCCCCHHH
Confidence            358999999999888888889999999999999999998 99999999999999999998754221     112468999


Q ss_pred             HHHHHHHhhcCCCC
Q 023465           85 VVKGAFELITDESK   98 (282)
Q Consensus        85 ~a~~~~~l~~~~~~   98 (282)
                      +|+.++..+.+...
T Consensus       212 ~A~~i~~~~~~~~~  225 (253)
T PRK07904        212 VAKLAVTAVAKGKE  225 (253)
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999976554

>PRK06182 short chain dehydrogenase; Validated

Probab=99.32  E-value=5.1e-12  Score=109.63  Aligned_cols=91  Identities=23%  Similarity=0.216  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------------   70 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------------   70 (282)
                      +.|+||++||..+..+.+....|++||+++++|+++++. +.++||+||+|+||+++|++.....+              
T Consensus       124 ~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  203 (273)
T PRK06182        124 RSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQ  203 (273)
T ss_pred             CCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHH
Confidence            358999999998888888889999999999999999998 99999999999999999997532110              


Q ss_pred             ------HHH--hhhCCCCCHHHHHHHHHHhhcCC
Q 023465           71 ------KFI--DLMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        71 ------~~~--~~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                            .+.  .+..+..+|+++|+.++++++..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~  237 (273)
T PRK06182        204 AQAVAASMRSTYGSGRLSDPSVIADAISKAVTAR  237 (273)
T ss_pred             HHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence                  000  02346789999999999999854

>PLN00015 protochlorophyllide reductase

Probab=99.32  E-value=5.6e-12  Score=111.44  Aligned_cols=87  Identities=22%  Similarity=0.265  Sum_probs=68.0

Q ss_pred             CChhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcc-cCcchhhhhHH-------H-HhhhCCCCCHHHHHHHHHHh
Q 023465           24 NDPIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFV-QTEMGLKVASK-------F-IDLMGGFVPMEMVVKGAFEL   92 (282)
Q Consensus        24 ~~~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v-~T~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~~l   92 (282)
                      +..+|++||+|+..+++.++. +.+ +||+||+|+||+| +|+|.....+.       . .....+..+||+.++.++++
T Consensus       181 ~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l  260 (308)
T PLN00015        181 GAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQV  260 (308)
T ss_pred             HHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhh
Confidence            456799999999999999988 764 7999999999999 79986432111       0 11234568999999999999


Q ss_pred             hcCCCCceEEEEEecCCc
Q 023465           93 ITDESKAGSCLWITNRRG  110 (282)
Q Consensus        93 ~~~~~~~~~~~~~~~~g~  110 (282)
                      +++.....+|.++..++.
T Consensus       261 ~~~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        261 VSDPSLTKSGVYWSWNGG  278 (308)
T ss_pred             ccccccCCCccccccCCc
Confidence            998777778888876654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.31  E-value=6.5e-12  Score=121.96  Aligned_cols=105  Identities=24%  Similarity=0.289  Sum_probs=86.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccC--cchhhh------------hHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQT--EMGLKV------------ASK   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T--~~~~~~------------~~~   71 (282)
                      +|+||++||..+..+.++...|++||+++++|+++++. +.++|||||+|+||++.|  .+....            .++
T Consensus       545 ~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~  624 (676)
T TIGR02632       545 GGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADE  624 (676)
T ss_pred             CCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHH
Confidence            57999999999999999999999999999999999998 999999999999999864  332110            011


Q ss_pred             ----H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 ----F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 ----~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                          +  ..++++..+|+|+++.+++++++.+...+|..+..||++
T Consensus       625 ~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       625 LEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence                1  114456789999999999999987778889888888874

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.30  E-value=8.2e-12  Score=108.28  Aligned_cols=90  Identities=27%  Similarity=0.294  Sum_probs=76.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+||++||.++..+.++...|++||+++++|+++|+. +.++||++++|+||+++|++.......   ......++++
T Consensus       128 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~  204 (273)
T PRK07825        128 GRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA---KGFKNVEPED  204 (273)
T ss_pred             CCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc---cCCCCCCHHH
Confidence            458999999999999999999999999999999999998 999999999999999999986543111   1124679999


Q ss_pred             HHHHHHHhhcCCCC
Q 023465           85 VVKGAFELITDESK   98 (282)
Q Consensus        85 ~a~~~~~l~~~~~~   98 (282)
                      +++.+++++++...
T Consensus       205 va~~~~~~l~~~~~  218 (273)
T PRK07825        205 VAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999987654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.30  E-value=9.1e-12  Score=107.06  Aligned_cols=107  Identities=25%  Similarity=0.307  Sum_probs=86.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----------   72 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----------   72 (282)
                      .+.++||++||..+..+.+....|++||+++.+++|.++. +.+.+|++|+|.||+++|++.....+..           
T Consensus       134 ~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~  213 (262)
T PRK13394        134 DRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV  213 (262)
T ss_pred             cCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHH
Confidence            3458999999998888888889999999999999999998 8889999999999999998753221110           


Q ss_pred             H-h------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I-D------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~-~------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      . .      ...++.+++|++++++++++..+...+|..+..++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        214 VKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            0 0      1245789999999999999877666677777777764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.29  E-value=1.1e-11  Score=105.59  Aligned_cols=106  Identities=24%  Similarity=0.305  Sum_probs=87.3

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HHH--hhhCCC
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KFI--DLMGGF   79 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~~--~~~~~~   79 (282)
                      ++.++||++||..+..+.++...|+++|++++.++++++. +.+.||++++|+||+++|++......  ...  .+....
T Consensus       137 ~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~  216 (249)
T PRK12827        137 RRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRL  216 (249)
T ss_pred             CCCeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCC
Confidence            3457999999999988889999999999999999999998 88899999999999999998654322  111  123445


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .+++++++.+++++++.+...+|.++..+++
T Consensus       217 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        217 GEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             cCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            6999999999999988777778877776665

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.29  E-value=9.6e-12  Score=111.20  Aligned_cols=92  Identities=20%  Similarity=0.181  Sum_probs=75.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC--CCcEEEEEeCCcccCcchhhhhHHH---HhhhCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR--KGIRINVLCPEFVQTEMGLKVASKF---IDLMGGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~--~gI~v~~i~PG~v~T~~~~~~~~~~---~~~~~~~   79 (282)
                      +.|+|||+||..+..+.+....|++||+++++|+++++. +..  .+|+||+|+||+++|++........   ..+..+.
T Consensus       135 ~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~  214 (334)
T PRK07109        135 DRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPI  214 (334)
T ss_pred             CCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCC
Confidence            358999999999999999999999999999999999987 754  5799999999999999865332211   1123456


Q ss_pred             CCHHHHHHHHHHhhcCCC
Q 023465           80 VPMEMVVKGAFELITDES   97 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~   97 (282)
                      .+|+++|+.+++++++..
T Consensus       215 ~~pe~vA~~i~~~~~~~~  232 (334)
T PRK07109        215 YQPEVVADAILYAAEHPR  232 (334)
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            799999999999998753

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.6e-11  Score=104.98  Aligned_cols=108  Identities=26%  Similarity=0.288  Sum_probs=88.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHHH-----
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKFI-----   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~~-----   73 (282)
                      +.++|+++||..+..+.+....|+++|++++.|+++++. +..+||++++++||+++|++..+..      +...     
T Consensus       131 ~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (252)
T PRK06138        131 GGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA  210 (252)
T ss_pred             CCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh
Confidence            358999999999988889999999999999999999998 8889999999999999999864321      1111     


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                       .+..++.+++++++.+++++++.....+|..+..++++..
T Consensus       211 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        211 RHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCeec
Confidence             1233467899999999999998887788888887877543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.27  E-value=1.3e-11  Score=105.35  Aligned_cols=99  Identities=18%  Similarity=0.109  Sum_probs=83.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.+++..|++||++++.|+++++. +...||++++++||+++|++.....+..  ...+..+|++
T Consensus       143 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~  220 (247)
T PRK08945        143 PAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE--DPQKLKTPED  220 (247)
T ss_pred             CCCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc--cccCCCCHHH
Confidence            458999999999998889999999999999999999998 8889999999999999999754332211  1235789999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEe
Q 023465           85 VVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      +++.++|++++.+.+.+|..+.
T Consensus       221 ~~~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        221 IMPLYLYLMGDDSRRKNGQSFD  242 (247)
T ss_pred             HHHHHHHHhCccccccCCeEEe
Confidence            9999999999888777776653

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.5e-11  Score=104.58  Aligned_cols=93  Identities=22%  Similarity=0.181  Sum_probs=76.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.++...|++||++++.|+++++. +.+.||++|+|.||+++|++.............+..++++
T Consensus       133 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~  212 (241)
T PRK07454        133 GGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQ  212 (241)
T ss_pred             CCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccccccccCCCHHH
Confidence            358999999999988888999999999999999999998 8899999999999999999854211110111134679999


Q ss_pred             HHHHHHHhhcCCCC
Q 023465           85 VVKGAFELITDESK   98 (282)
Q Consensus        85 ~a~~~~~l~~~~~~   98 (282)
                      +++.++++++++..
T Consensus       213 va~~~~~l~~~~~~  226 (241)
T PRK07454        213 VAQTILHLAQLPPS  226 (241)
T ss_pred             HHHHHHHHHcCCcc
Confidence            99999999987755

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.24  E-value=3.2e-11  Score=102.57  Aligned_cols=105  Identities=31%  Similarity=0.388  Sum_probs=88.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~~   79 (282)
                      .+++|++||..+..+.+....|++||++++.|+++++. +...||++++|+||+++|++.....+....      +..+.
T Consensus       134 ~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (247)
T PRK05565        134 SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRL  213 (247)
T ss_pred             CcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCC
Confidence            57899999999988889999999999999999999998 888999999999999999986544322111      22346


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+++++++.+.+++++.+...+|.++..++++
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        214 GKPEEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            79999999999999988888888888877764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.23  E-value=3.1e-11  Score=103.45  Aligned_cols=107  Identities=24%  Similarity=0.298  Sum_probs=86.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----------H-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----------F-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----------~-   72 (282)
                      +.++||++||..+..+.++.+.|+++|++++.|++.++. +...+|++++++||+++|++.....+.           . 
T Consensus       131 ~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~  210 (258)
T PRK12429        131 GGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVL  210 (258)
T ss_pred             CCeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHH
Confidence            358999999999999999999999999999999999998 988999999999999999886421110           0 


Q ss_pred             Hh------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 ID------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~~------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..      ...++.+++|+++.+++++++.....+|..+..++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        211 EDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             HHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCEe
Confidence            00      22457899999999999998776666666676677653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.23  E-value=2.7e-11  Score=99.07  Aligned_cols=99  Identities=19%  Similarity=0.259  Sum_probs=80.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhH------H----H--Hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVAS------K----F--ID   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~------~----~--~~   74 (282)
                      .|-+||+||.++..++..|++||.+|||.++|.+.||.-++++|+|.++.||.+||.|.....+      .    +  ..
T Consensus       137 ~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~  216 (253)
T KOG1204|consen  137 NGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK  216 (253)
T ss_pred             cCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999744489999999999999999743321      1    1  12


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      ..++..+|...++.+.+|+.... ..+|.++.
T Consensus       217 ~~~~ll~~~~~a~~l~~L~e~~~-f~sG~~vd  247 (253)
T KOG1204|consen  217 ESGQLLDPQVTAKVLAKLLEKGD-FVSGQHVD  247 (253)
T ss_pred             hcCCcCChhhHHHHHHHHHHhcC-cccccccc
Confidence            34578899999999999987664 55665554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.23  E-value=5.5e-11  Score=101.06  Aligned_cols=106  Identities=29%  Similarity=0.379  Sum_probs=87.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~~   79 (282)
                      .+++|++||..+..+.++...|+++|++++.|+++++. +...+|++++++||+++|++.....+...      .+..+.
T Consensus       134 ~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (248)
T PRK05557        134 SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRL  213 (248)
T ss_pred             CeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCC
Confidence            47899999998888889999999999999999999998 88899999999999999988654322211      123456


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+++++++.+.+++++.+...+|.++..++++.
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        214 GQPEEIASAVAFLASDEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             cCHHHHHHHHHHHcCcccCCccccEEEecCCcc
Confidence            899999999999998866677777777777653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.22  E-value=4.5e-11  Score=103.39  Aligned_cols=93  Identities=23%  Similarity=0.318  Sum_probs=76.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-------------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-------------   70 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-------------   70 (282)
                      ++.|+||++||.++..+.+....|++||+++++|+++++. ++++||++++|+||+++|++......             
T Consensus       122 ~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  201 (270)
T PRK06179        122 QGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERA  201 (270)
T ss_pred             cCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHH
Confidence            3458999999999999999999999999999999999998 99999999999999999998643210             


Q ss_pred             ----HHHhhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           71 ----KFIDLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        71 ----~~~~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                          .......+..+|+++++.+++++++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        202 VVSKAVAKAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             HHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence                001123455789999999999997654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.22  E-value=6.4e-12  Score=121.84  Aligned_cols=122  Identities=22%  Similarity=0.168  Sum_probs=103.5

Q ss_pred             CCCcEEEEEEc-cccccccccccCCCCCCCCC-------CCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEE
Q 023465          148 ESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRL-------PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFT  218 (282)
Q Consensus       148 ~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~-------p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~  218 (282)
                      .++.=+.-|.+ .+|++|.+...|... +.-.       -.++|-|++|+-          +-|.||++.. --+.|+-+
T Consensus      1443 ~~~~e~CtVYYAplNFRDiMLasGkL~-~DAiPG~~a~qdclLGmEFsGRd----------~~GrRvM~mvpAksLATt~ 1511 (2376)
T KOG1202|consen 1443 CPGLELCTVYYAPLNFRDIMLASGKLS-PDAIPGDLASQDCLLGMEFSGRD----------ASGRRVMGMVPAKSLATTV 1511 (2376)
T ss_pred             CCCCceeEEEeccccHHHHHHhcCCCC-cccCCCccchhhheeceeecccc----------CCCcEEEEeeehhhhhhhh
Confidence            45666777888 999999999887643 2222       368999999863          5599999874 47899999


Q ss_pred             eecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .++.+.+|.+|.  ..+++++.++.+.|||+|| .+...++||++|||+++||||++||.+|.+.
T Consensus      1512 l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~ 1576 (2376)
T KOG1202|consen 1512 LASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAH 1576 (2376)
T ss_pred             hcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHc
Confidence            999999999999  7899999999999999999 7777899999999999999999999998764

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.22  E-value=2.9e-11  Score=103.81  Aligned_cols=106  Identities=25%  Similarity=0.416  Sum_probs=84.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---hHHHH------hh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---ASKFI------DL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---~~~~~------~~   75 (282)
                      +.++||++||..+.. ..+...|++||++++.++++++. ++++||+||+++||+++|++....   .+++.      .+
T Consensus       127 ~~~~iv~~sS~~~~~-~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  205 (257)
T PRK07074        127 SRGAVVNIGSVNGMA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYP  205 (257)
T ss_pred             CCeEEEEEcchhhcC-CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCC
Confidence            358999999977653 34667899999999999999998 999999999999999999975421   11111      13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..++..++|+++++++++++.....+|..+..++++.
T Consensus       206 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  242 (257)
T PRK07074        206 LQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLT  242 (257)
T ss_pred             CCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcC
Confidence            4567899999999999998877777788887787753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.22  E-value=4e-11  Score=102.70  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=83.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHHh------hhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFID------LMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~~------~~~   77 (282)
                      .|+||++||..+..+.++...|++||++++.|+++++. +.+++|++++++||+++|++.....  +....      ..+
T Consensus       139 ~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  218 (254)
T PRK12746        139 EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFG  218 (254)
T ss_pred             CCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcC
Confidence            37999999999988899999999999999999999998 8899999999999999999865321  11111      234


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +..+++|+++.+.+++++.+...+|..+..+++
T Consensus       219 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        219 RIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            567999999999999987665555655555554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.21  E-value=4.3e-11  Score=103.18  Aligned_cols=91  Identities=22%  Similarity=0.267  Sum_probs=76.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhh-hCCCCCHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDL-MGGFVPMEM   84 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~   84 (282)
                      .|+||++||..+..+.++...|++||+++.+|+++++. +.++||+|++|+||+++|++........... ..+..+|++
T Consensus       131 ~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  210 (263)
T PRK09072        131 SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPED  210 (263)
T ss_pred             CCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccccCCCCCHHH
Confidence            48999999999988999999999999999999999998 9999999999999999999865432221111 235679999


Q ss_pred             HHHHHHHhhcCCC
Q 023465           85 VVKGAFELITDES   97 (282)
Q Consensus        85 ~a~~~~~l~~~~~   97 (282)
                      +++.++++++...
T Consensus       211 va~~i~~~~~~~~  223 (263)
T PRK09072        211 VAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.21  E-value=7.7e-11  Score=102.37  Aligned_cols=94  Identities=19%  Similarity=0.212  Sum_probs=77.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---------hHH---
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---------ASK---   71 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---------~~~---   71 (282)
                      ++.++||++||.++..+.+....|++||+++++|++.++. +.++||+||.|+||+++|++....         .+.   
T Consensus       126 ~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~  205 (275)
T PRK08263        126 QRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLRE  205 (275)
T ss_pred             cCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHH
Confidence            3457999999999999999999999999999999999998 999999999999999999986311         011   


Q ss_pred             -HH--hhhCCC-CCHHHHHHHHHHhhcCCCC
Q 023465           72 -FI--DLMGGF-VPMEMVVKGAFELITDESK   98 (282)
Q Consensus        72 -~~--~~~~~~-~~~~~~a~~~~~l~~~~~~   98 (282)
                       ..  ....+. .+|+++++.++++++....
T Consensus       206 ~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~  236 (275)
T PRK08263        206 ELAEQWSERSVDGDPEAAAEALLKLVDAENP  236 (275)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHHcCCCC
Confidence             11  123455 8999999999999987643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.21  E-value=2e-11  Score=104.66  Aligned_cols=60  Identities=25%  Similarity=0.388  Sum_probs=58.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~   66 (282)
                      +|||||+||+.|..+.|....|++||+|++.|+.+|+. +.++||+|..|.||+++|++..
T Consensus       157 rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  157 RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            59999999999999999999999999999999999998 9999999999999999999975

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.21  E-value=5e-11  Score=101.49  Aligned_cols=104  Identities=27%  Similarity=0.250  Sum_probs=82.5

Q ss_pred             CcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~------~~~~~   77 (282)
                      .|+||++||..+..+.+. ...|+++|++++.|+++++. +.++||++++|+||++.|++.... .+..      ..++.
T Consensus       134 ~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (247)
T PRK09730        134 GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ  213 (247)
T ss_pred             CcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC
Confidence            578999999988877776 46899999999999999998 888999999999999999975321 1111      11334


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +..+++++++.+++++++.....+|..+..+++
T Consensus       214 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        214 RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            556899999999999988777777777766653

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.20  E-value=4.9e-11  Score=102.50  Aligned_cols=89  Identities=21%  Similarity=0.345  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+||++||.++..+.+....|++||++++.|+++++. +.++||+|++|+||+++|++......    ......+|++
T Consensus       129 ~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~  204 (257)
T PRK07024        129 RRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPY----PMPFLMDADR  204 (257)
T ss_pred             CCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCC----CCCCccCHHH
Confidence            358999999999999999999999999999999999998 99999999999999999997642110    1112368999


Q ss_pred             HHHHHHHhhcCCCC
Q 023465           85 VVKGAFELITDESK   98 (282)
Q Consensus        85 ~a~~~~~l~~~~~~   98 (282)
                      +++.++..+.+...
T Consensus       205 ~a~~~~~~l~~~~~  218 (257)
T PRK07024        205 FAARAARAIARGRR  218 (257)
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999976543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.19  E-value=6.6e-11  Score=102.94  Aligned_cols=92  Identities=17%  Similarity=0.161  Sum_probs=74.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-------hHH------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-------ASK------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-------~~~------   71 (282)
                      +.|+||++||.++..+.++...|++||+++++|+++++. +.++||+|++|+||+++|++....       .++      
T Consensus       128 ~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (277)
T PRK06180        128 RRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFG  207 (277)
T ss_pred             CCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHH
Confidence            357999999999999999999999999999999999998 989999999999999999864211       000      


Q ss_pred             -HH-----hhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 -FI-----DLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 -~~-----~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                       ..     ....+..+|+++++.++++++.+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        208 PIRQAREAKSGKQPGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             HHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence             00     012346799999999999987654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.19  E-value=1.1e-10  Score=100.31  Aligned_cols=103  Identities=17%  Similarity=0.118  Sum_probs=78.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH--hhhCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI--DLMGGFV   80 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~--~~~~~~~   80 (282)
                      ..|+||+++|..+..+.|.+..|++||+++++|+++++. +.+. |+||+|+||++.|.......  ....  .+.++..
T Consensus       137 ~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK09134        137 ARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGS  215 (258)
T ss_pred             CCceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHHHHHHhcCCCCCCc
Confidence            358999999987877888888999999999999999998 7665 99999999999986532111  1111  1334567


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++|+++.++++++..  ..+|..+..+++.
T Consensus       216 ~~~d~a~~~~~~~~~~--~~~g~~~~i~gg~  244 (258)
T PRK09134        216 TPEEIAAAVRYLLDAP--SVTGQMIAVDGGQ  244 (258)
T ss_pred             CHHHHHHHHHHHhcCC--CcCCCEEEECCCe
Confidence            8999999999999854  3456566666664

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.18  E-value=5.9e-11  Score=104.23  Aligned_cols=89  Identities=17%  Similarity=0.126  Sum_probs=72.2

Q ss_pred             CCCcEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            5 KKPGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      ++.|+||++||.++.. +.++...|++||+|+++|+++++. +.++||+|++|+||+++|++.......   ......+|
T Consensus       168 ~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~---~~~~~~~p  244 (293)
T PRK05866        168 RGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY---DGLPALTA  244 (293)
T ss_pred             cCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc---cCCCCCCH
Confidence            3458999999976654 467888999999999999999998 999999999999999999987532110   11134699


Q ss_pred             HHHHHHHHHhhcCC
Q 023465           83 EMVVKGAFELITDE   96 (282)
Q Consensus        83 ~~~a~~~~~l~~~~   96 (282)
                      |++|+.++..+...
T Consensus       245 e~vA~~~~~~~~~~  258 (293)
T PRK05866        245 DEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999998754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.18  E-value=1.2e-10  Score=99.47  Aligned_cols=95  Identities=24%  Similarity=0.280  Sum_probs=74.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc-Ccchhhh---hHH-HHh--hhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ-TEMGLKV---ASK-FID--LMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~~---~~~-~~~--~~~   77 (282)
                      +.++||++||..+..+.++...|++||+++++|++.++. +.+++|++|+|+||++. |++....   .+. ...  ...
T Consensus       125 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~  204 (248)
T PRK10538        125 NHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNT  204 (248)
T ss_pred             CCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcccc
Confidence            357999999999888888999999999999999999998 99999999999999998 5443211   111 111  112


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCce
Q 023465           78 GFVPMEMVVKGAFELITDESKAG  100 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~  100 (282)
                      .+.+|+++|+.++++++..+.+.
T Consensus       205 ~~~~~~dvA~~~~~l~~~~~~~~  227 (248)
T PRK10538        205 VALTPEDVSEAVWWVATLPAHVN  227 (248)
T ss_pred             CCCCHHHHHHHHHHHhcCCCccc
Confidence            45799999999999998766543

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.18  E-value=1e-10  Score=100.66  Aligned_cols=91  Identities=25%  Similarity=0.308  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh----hHHHHhhhCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV----ASKFIDLMGGFV   80 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~----~~~~~~~~~~~~   80 (282)
                      +.++||++||..+..+.++...|++||+++++|+++++. +.++||++|+|.||+++|++....    ............
T Consensus       127 ~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  206 (260)
T PRK08267        127 PGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRL  206 (260)
T ss_pred             CCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCC
Confidence            358999999999999999999999999999999999998 999999999999999999986531    111111223347


Q ss_pred             CHHHHHHHHHHhhcCC
Q 023465           81 PMEMVVKGAFELITDE   96 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~   96 (282)
                      +|+++++.+++++.+.
T Consensus       207 ~~~~va~~~~~~~~~~  222 (260)
T PRK08267        207 TPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            8999999999998643

>PRK08324 short chain dehydrogenase; Validated

Probab=99.18  E-value=7.9e-11  Score=114.79  Aligned_cols=105  Identities=23%  Similarity=0.214  Sum_probs=86.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcc--cCcchhhhh------------HH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV--QTEMGLKVA------------SK   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v--~T~~~~~~~------------~~   71 (282)
                      +|+||++||..+..+.++...|++||+++++|+++++. +.++||+||.|+||++  +|++.....            ++
T Consensus       550 ~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~  629 (681)
T PRK08324        550 GGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEE  629 (681)
T ss_pred             CcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHH
Confidence            48999999999999999999999999999999999998 9999999999999999  888753210            10


Q ss_pred             ----H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 ----F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 ----~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                          +  ...+.+...++|+++++++++++.....+|..+..+|+.
T Consensus       630 ~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        630 LEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN  675 (681)
T ss_pred             HHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence                1  113346789999999999999876667778777777774

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.3e-10  Score=99.22  Aligned_cols=102  Identities=14%  Similarity=0.057  Sum_probs=77.0

Q ss_pred             CcEEEEEcCCCcc-----CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh----hH----HH
Q 023465            7 PGVIINMGSSAGL-----YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV----AS----KF   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~-----~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~----~~----~~   72 (282)
                      .|+||++||..+.     .+.+....|++||++++.+++.++. +++.||+||+|+||+++|++....    .+    ..
T Consensus       127 ~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~  206 (248)
T PRK07806        127 GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEAR  206 (248)
T ss_pred             CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHH
Confidence            3799999996553     2345567899999999999999998 999999999999999998865321    11    11


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+..++.+|+|++++++++++..  ..+|..+..+++
T Consensus       207 ~~~~~~~~~~~dva~~~~~l~~~~--~~~g~~~~i~~~  242 (248)
T PRK07806        207 REAAGKLYTVSEFAAEVARAVTAP--VPSGHIEYVGGA  242 (248)
T ss_pred             HhhhcccCCHHHHHHHHHHHhhcc--ccCccEEEecCc
Confidence            224567899999999999999844  345555544544

>PRK06196 oxidoreductase; Provisional

Probab=99.17  E-value=7.9e-11  Score=104.43  Aligned_cols=93  Identities=16%  Similarity=0.151  Sum_probs=71.4

Q ss_pred             CCcEEEEEcCCCccC------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-
Q 023465            6 KPGVIINMGSSAGLY------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-   71 (282)
                      +.++||++||..+..            +.+....|++||++++.|++.++. +.++||+||+|+||+++|++....... 
T Consensus       147 ~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~  226 (315)
T PRK06196        147 AGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE  226 (315)
T ss_pred             CCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh
Confidence            348999999976532            234557899999999999999998 999999999999999999986432211 


Q ss_pred             -----HH----hhhC-CCCCHHHHHHHHHHhhcCCCC
Q 023465           72 -----FI----DLMG-GFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        72 -----~~----~~~~-~~~~~~~~a~~~~~l~~~~~~   98 (282)
                           +.    .++. +..+|+++++.++|+++....
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  263 (315)
T PRK06196        227 QVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQL  263 (315)
T ss_pred             hhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCcc
Confidence                 00    1121 357899999999999976544

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.17  E-value=8.2e-11  Score=101.87  Aligned_cols=92  Identities=24%  Similarity=0.336  Sum_probs=76.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HH---H-Hhh-h
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SK---F-IDL-M   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~---~-~~~-~   76 (282)
                      +.++||++||.++..+.+..+.|++||+++++|+++|+. +.++||++++|+||+++|++.....   +.   . ... .
T Consensus       127 ~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  206 (270)
T PRK05650        127 KSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLE  206 (270)
T ss_pred             CCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhh
Confidence            358999999999999999999999999999999999998 9999999999999999999864321   11   1 111 1


Q ss_pred             CCCCCHHHHHHHHHHhhcCCC
Q 023465           77 GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ....+++++|+.++..+++..
T Consensus       207 ~~~~~~~~vA~~i~~~l~~~~  227 (270)
T PRK05650        207 KSPITAADIADYIYQQVAKGE  227 (270)
T ss_pred             cCCCCHHHHHHHHHHHHhCCC
Confidence            335799999999999998654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.17  E-value=1e-10  Score=99.96  Aligned_cols=87  Identities=30%  Similarity=0.379  Sum_probs=71.3

Q ss_pred             EEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----Hh----hhC
Q 023465            9 VIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----ID----LMG   77 (282)
Q Consensus         9 ~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~~----~~~   77 (282)
                      +|||+||..+. +.+.. ..|++||+|+++|+++++. +.++||+||+|+||+++|++........     ..    +..
T Consensus       137 ~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T COG1028         137 RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLG  215 (251)
T ss_pred             eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCC
Confidence            89999999999 87774 9999999999999999998 9999999999999999999986432211     00    222


Q ss_pred             CCCCHHHHHHHHHHhhcCC
Q 023465           78 GFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~   96 (282)
                      +...|+++++.+.++.+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         216 RLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             CCcCHHHHHHHHHHHcCcc
Confidence            5677899999998887654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.16  E-value=1.7e-10  Score=98.62  Aligned_cols=104  Identities=31%  Similarity=0.446  Sum_probs=80.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHHHh---h
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKFID---L   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~~~---~   75 (282)
                      .|+||++||.++..+.++...|++||+++++|+++++. +.+ +|+++.+.||+++|++.....       +....   .
T Consensus       133 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~  211 (252)
T PRK06077        133 GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTL  211 (252)
T ss_pred             CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCc
Confidence            47999999999999999999999999999999999998 877 899999999999999864321       11111   2


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ..+..+|+|+++.++++++...  .++..+..+++...
T Consensus       212 ~~~~~~~~dva~~~~~~~~~~~--~~g~~~~i~~g~~~  247 (252)
T PRK06077        212 MGKILDPEEVAEFVAAILKIES--ITGQVFVLDSGESL  247 (252)
T ss_pred             CCCCCCHHHHHHHHHHHhCccc--cCCCeEEecCCeec
Confidence            3456899999999999996432  33444444555433

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2e-10  Score=99.95  Aligned_cols=93  Identities=24%  Similarity=0.161  Sum_probs=76.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---------------   69 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---------------   69 (282)
                      +.++||++||..+..+.++...|++||+++++|+++++. +.++||++++++||+++|++.....               
T Consensus       131 ~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (280)
T PRK06914        131 KSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKE  210 (280)
T ss_pred             CCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHH
Confidence            358999999999988999999999999999999999998 8899999999999999999754210               


Q ss_pred             --HHHH----hhhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           70 --SKFI----DLMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        70 --~~~~----~~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                        ....    ....+..+|+|+++++++++++...
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  245 (280)
T PRK06914        211 YMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP  245 (280)
T ss_pred             HHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC
Confidence              0000    1234568999999999999987654

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1.5e-10  Score=98.60  Aligned_cols=89  Identities=22%  Similarity=0.270  Sum_probs=75.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.++...|++||+++++|+++++. +.+.||++++|+||+++|++.....    .+.....+|++
T Consensus       126 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~  201 (243)
T PRK07102        126 GSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK----LPGPLTAQPEE  201 (243)
T ss_pred             CCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC----CCccccCCHHH
Confidence            358999999999988889999999999999999999998 9999999999999999999764321    11123578999


Q ss_pred             HHHHHHHhhcCCCC
Q 023465           85 VVKGAFELITDESK   98 (282)
Q Consensus        85 ~a~~~~~l~~~~~~   98 (282)
                      +++.++++++....
T Consensus       202 ~a~~i~~~~~~~~~  215 (243)
T PRK07102        202 VAKDIFRAIEKGKD  215 (243)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999986543

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.14  E-value=3.1e-10  Score=96.62  Aligned_cols=91  Identities=21%  Similarity=0.310  Sum_probs=71.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhh-------H---HH--H
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVA-------S---KF--I   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~-------~---~~--~   73 (282)
                      ..|+||++||..+..+.+++..|+++|+++++|++.++.....||++|+|+||+++|++.....       +   ++  .
T Consensus       128 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  207 (243)
T PRK07023        128 AERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFREL  207 (243)
T ss_pred             CCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHh
Confidence            3589999999999999999999999999999999999764567999999999999999854211       0   01  1


Q ss_pred             hhhCCCCCHHHHHHHH-HHhhcCC
Q 023465           74 DLMGGFVPMEMVVKGA-FELITDE   96 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~-~~l~~~~   96 (282)
                      .+.++..+|+++++.+ .++.++.
T Consensus       208 ~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        208 KASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             hhcCCCCCHHHHHHHHHHHHhccc
Confidence            1345678999999954 5555544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.13  E-value=1.9e-10  Score=99.78  Aligned_cols=91  Identities=15%  Similarity=0.261  Sum_probs=73.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH--------------
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK--------------   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~--------------   71 (282)
                      .|+||++||.++..+.+....|++||+++++|+++++. ++++||+|++|+||+++|++.......              
T Consensus       122 ~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  201 (274)
T PRK05693        122 RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPL  201 (274)
T ss_pred             CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHH
Confidence            48999999999998899999999999999999999998 999999999999999999986532100              


Q ss_pred             ---HHh----hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 ---FID----LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 ---~~~----~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                         ...    ......+|+++++.++..+....
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        202 REHIQARARASQDNPTPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             HHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence               000    01234689999999999887544

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.12  E-value=3.2e-10  Score=95.90  Aligned_cols=104  Identities=33%  Similarity=0.423  Sum_probs=84.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~~   79 (282)
                      .++++++||.++..+.+....|+++|++++.++++|+. +...|++++.+.||+++|++..........      +..+.
T Consensus       127 ~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (239)
T TIGR01830       127 SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRF  206 (239)
T ss_pred             CeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCC
Confidence            47999999999988999999999999999999999998 888999999999999999876543222111      23456


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .+++++++.+++++++.+...++.++..+++
T Consensus       207 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       207 GTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             cCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            7999999999999977666666766665554

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.11  E-value=2e-10  Score=98.07  Aligned_cols=101  Identities=24%  Similarity=0.288  Sum_probs=77.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-HHHh------hhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-KFID------LMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-~~~~------~~~~   78 (282)
                      .|+||++||.++..   ..+.|++||++++.|+++++. +...||+++.++||.++|++.....+ ....      +...
T Consensus       137 ~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  213 (250)
T PRK07774        137 GGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR  213 (250)
T ss_pred             CcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC
Confidence            58999999987753   457899999999999999998 88899999999999999998653221 1111      2234


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+++++++.+++++++.....++..+..+++
T Consensus       214 ~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        214 MGTPEDLVGMCLFLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             CcCHHHHHHHHHHHhChhhhCcCCCEEEECCC
Confidence            67899999999999987654445555555554

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.11  E-value=4.6e-10  Score=97.52  Aligned_cols=92  Identities=18%  Similarity=0.264  Sum_probs=74.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------HHHh--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------KFID--   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------~~~~--   74 (282)
                      +.|+||++||..+..+.++...|++||+++++|++.++. +.++||++++|+||+++|++......        ....  
T Consensus       137 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~  216 (274)
T PRK07775        137 RRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG  216 (274)
T ss_pred             CCceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc
Confidence            358999999999988888889999999999999999998 88899999999999999986432111        1110  


Q ss_pred             --hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           75 --LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        75 --~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                        ...++..++|++++++++++...
T Consensus       217 ~~~~~~~~~~~dva~a~~~~~~~~~  241 (274)
T PRK07775        217 QARHDYFLRASDLARAITFVAETPR  241 (274)
T ss_pred             ccccccccCHHHHHHHHHHHhcCCC
Confidence              12347899999999999997653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.11  E-value=2.1e-10  Score=97.62  Aligned_cols=87  Identities=24%  Similarity=0.301  Sum_probs=73.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      +++||++||.++..+.++...|++||+++++|+++++. +.++||++++|.||+++|++......    ......+|+++
T Consensus       120 ~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~----~~~~~~~~~~~  195 (240)
T PRK06101        120 GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF----AMPMIITVEQA  195 (240)
T ss_pred             CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC----CCCcccCHHHH
Confidence            46899999999999999999999999999999999998 99999999999999999998653210    11124689999


Q ss_pred             HHHHHHhhcCCC
Q 023465           86 VKGAFELITDES   97 (282)
Q Consensus        86 a~~~~~l~~~~~   97 (282)
                      ++.++..+....
T Consensus       196 a~~i~~~i~~~~  207 (240)
T PRK06101        196 SQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHhcCC
Confidence            999998887643

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.10  E-value=3.7e-10  Score=95.46  Aligned_cols=104  Identities=25%  Similarity=0.291  Sum_probs=85.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.+....|+++|++++.+++.++. +.+.+|+++.|.||++.|++......  ...+..+.+++|
T Consensus       132 ~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~--~~~~~~~~~~~d  209 (239)
T PRK12828        132 GGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP--DADFSRWVTPEQ  209 (239)
T ss_pred             CCCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC--chhhhcCCCHHH
Confidence            357999999999988888899999999999999999998 88899999999999999986532211  112334678999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.+++++++.+.+.+|..+..+++.
T Consensus       210 va~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        210 IAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             HHHHHHHHhCcccccccceEEEecCCE
Confidence            999999999887666677777777763

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.09  E-value=6.4e-11  Score=95.96  Aligned_cols=61  Identities=36%  Similarity=0.484  Sum_probs=58.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~   67 (282)
                      .|.|||++|+++..+.|+.+.|+|||||++++++.|+. +++.||+|..+-||.|.|++.+.
T Consensus       131 KGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  131 KGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             cceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            48999999999999999999999999999999999998 99999999999999999999765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.09  E-value=4.3e-10  Score=96.70  Aligned_cols=105  Identities=28%  Similarity=0.296  Sum_probs=83.6

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---------------
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---------------   71 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---------------   71 (282)
                      ++|+++||.++..+.+....|+++|++++.|++.++. +...+|++++|.||++.|++.......               
T Consensus       140 ~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (264)
T PRK12829        140 GVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQE  219 (264)
T ss_pred             eEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHH
Confidence            6899999998888889999999999999999999998 888899999999999999986433211               


Q ss_pred             HH--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 FI--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 ~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..  .+..++.+++++++.+++++++.....+|..+..+++.+
T Consensus       220 ~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        220 YLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            00  122357899999999999997655555666666666644

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.09  E-value=2.9e-10  Score=96.95  Aligned_cols=106  Identities=25%  Similarity=0.248  Sum_probs=86.0

Q ss_pred             CCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----HH--hhh
Q 023465            6 KPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----FI--DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~--~~~   76 (282)
                      +.++||++||..+. .+.++...|+++|++++.++++++. +.+.|++++.|.||.+.|++.....+.     ..  .+.
T Consensus       133 ~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~  212 (251)
T PRK12826        133 GGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL  212 (251)
T ss_pred             CCcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC
Confidence            35799999999888 7888899999999999999999998 888999999999999999876433221     11  133


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++.+++|+++.+.+++++...+.+|..+..+++.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        213 GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            46689999999999999877666677777767664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.09  E-value=2.1e-10  Score=111.49  Aligned_cols=90  Identities=17%  Similarity=0.138  Sum_probs=75.1

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      ++.|+||++||.++..+.++.+.|++||+++++|+++++. +.++||+||+|+||+++|+|...... .  ......+||
T Consensus       499 ~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-~--~~~~~~~~~  575 (657)
T PRK07201        499 RRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-Y--NNVPTISPE  575 (657)
T ss_pred             cCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-c--cCCCCCCHH
Confidence            3458999999999988899999999999999999999998 99999999999999999998753211 0  112357999


Q ss_pred             HHHHHHHHhhcCCC
Q 023465           84 MVVKGAFELITDES   97 (282)
Q Consensus        84 ~~a~~~~~l~~~~~   97 (282)
                      ++|+.++..+.+..
T Consensus       576 ~~a~~i~~~~~~~~  589 (657)
T PRK07201        576 EAADMVVRAIVEKP  589 (657)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999876543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.08  E-value=4.8e-10  Score=94.97  Aligned_cols=104  Identities=22%  Similarity=0.270  Sum_probs=80.9

Q ss_pred             CcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~~   83 (282)
                      +|++|++||..+. .+.+....|++||++++.++++++. +...||++++|+||++.|++..... ...........+++
T Consensus       128 ~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~  207 (238)
T PRK05786        128 GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPE  207 (238)
T ss_pred             CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHH
Confidence            4789999998774 3567788899999999999999998 8889999999999999998743211 11111112357899


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ++++.+++++++.+...+|.++..+++
T Consensus       208 ~va~~~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        208 DFAKVIIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             HHHHHHHHHhcccccCccCCEEEECCc
Confidence            999999999988776677777666655

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.08  E-value=4e-10  Score=95.68  Aligned_cols=106  Identities=25%  Similarity=0.291  Sum_probs=86.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH------HhhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF------IDLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~------~~~~~~   78 (282)
                      +.+++|++||..+..+.++...|+.+|+++++|++.++. +.+.||+++.|.||++.|++........      ..+..+
T Consensus       134 ~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T PRK12825        134 RGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGR  213 (249)
T ss_pred             CCCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCC
Confidence            357999999999988888899999999999999999998 8888999999999999999865432111      123345


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+++|+++.+.+++++.+...+|..+..+++.
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        214 SGTPEDIARAVAFLCSDASDYITGQVIEVTGGV  246 (249)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCCCE
Confidence            678999999999999887666777777767664

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.06  E-value=5.9e-10  Score=96.00  Aligned_cols=91  Identities=24%  Similarity=0.331  Sum_probs=75.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----HH-h--hhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----FI-D--LMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~~-~--~~~~   78 (282)
                      .++||++||..+..+.++...|++||++++++++.++. +.+++|++|+|.||++.|++.......    .. .  ...+
T Consensus       129 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  208 (263)
T PRK06181        129 RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESK  208 (263)
T ss_pred             CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccC
Confidence            47999999999988899999999999999999999998 999999999999999999986533211    00 0  1125


Q ss_pred             CCCHHHHHHHHHHhhcCCC
Q 023465           79 FVPMEMVVKGAFELITDES   97 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~   97 (282)
                      +.+|+|+++.++++++...
T Consensus       209 ~~~~~dva~~i~~~~~~~~  227 (263)
T PRK06181        209 IMSAEECAEAILPAIARRK  227 (263)
T ss_pred             CCCHHHHHHHHHHHhhCCC
Confidence            7899999999999997543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.06  E-value=7e-10  Score=98.37  Aligned_cols=102  Identities=21%  Similarity=0.251  Sum_probs=73.9

Q ss_pred             CcEEEEEcCCCccCC---------------------------------CCCChhhHhhHHHHHHHHHHhcc-cc-CCCcE
Q 023465            7 PGVIINMGSSAGLYP---------------------------------MYNDPIYSASKGGVVLFTRSLTP-YK-RKGIR   51 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~---------------------------------~~~~~~Y~asKaal~~~t~~la~-~~-~~gI~   51 (282)
                      .|+||++||.++...                                 ..++..|++||+|+..+++.|+. +. ++||+
T Consensus       135 ~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~  214 (314)
T TIGR01289       135 DKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGIT  214 (314)
T ss_pred             CCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeE
Confidence            489999999877421                                 12456799999999999999987 74 57999


Q ss_pred             EEEEeCCcc-cCcchhhhhH-------HHHh-hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecC
Q 023465           52 INVLCPEFV-QTEMGLKVAS-------KFID-LMGGFVPMEMVVKGAFELITDESKAGSCLWITNR  108 (282)
Q Consensus        52 v~~i~PG~v-~T~~~~~~~~-------~~~~-~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~  108 (282)
                      |++|+||+| +|+|......       .+.. ......++++.++.+++++.+.....+|.++..+
T Consensus       215 v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~  280 (314)
T TIGR01289       215 FASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWG  280 (314)
T ss_pred             EEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecC
Confidence            999999999 7998643111       0111 1123578999999999988775544456666543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.05  E-value=9.2e-10  Score=92.69  Aligned_cols=90  Identities=30%  Similarity=0.405  Sum_probs=69.6

Q ss_pred             CcEEEEEcCCCccCCC---CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            7 PGVIINMGSSAGLYPM---YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~---~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      .++|+++||..+..+.   ..+..|+++|++++.|+++++. +.+++|+||+|+||+++|++....         ...++
T Consensus       123 ~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~---------~~~~~  193 (225)
T PRK08177        123 QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN---------APLDV  193 (225)
T ss_pred             CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC---------CCCCH
Confidence            4789999998776543   3567899999999999999998 999999999999999999986431         13577


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEE
Q 023465           83 EMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ++.++.++..+.+.....+..++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~  216 (225)
T PRK08177        194 ETSVKGLVEQIEAASGKGGHRFI  216 (225)
T ss_pred             HHHHHHHHHHHHhCCccCCCcee
Confidence            78888887777665543333333

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.05  E-value=8e-10  Score=94.47  Aligned_cols=106  Identities=27%  Similarity=0.346  Sum_probs=83.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-------------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-------------   71 (282)
                      +.+++|++||..+..+.+....|+++|+++++++++++. +.+.+|+++.|+||++.|++.......             
T Consensus       128 ~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~  207 (255)
T TIGR01963       128 GWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVI  207 (255)
T ss_pred             CCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHH
Confidence            357999999998888889999999999999999999988 888899999999999999875332110             


Q ss_pred             ---H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 ---F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 ---~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                         .  ......+.+++|+++++++++++.....++..+..++++
T Consensus       208 ~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       208 REVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence               0  002234789999999999999876555566666666664

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.03  E-value=1e-09  Score=93.07  Aligned_cols=105  Identities=28%  Similarity=0.371  Sum_probs=85.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~~   79 (282)
                      .++||++||..+..+......|+.+|++++.++++++. +.+.+++++.|.||.+.+++.........+      +....
T Consensus       133 ~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (246)
T PRK05653        133 YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRL  212 (246)
T ss_pred             CcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCC
Confidence            47999999998888888889999999999999999998 888999999999999999876532221111      23456


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+++++++.+.+++++.....++..+..+++.
T Consensus       213 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        213 GQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            78999999999999877666677777767664

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.03  E-value=9.6e-10  Score=93.77  Aligned_cols=87  Identities=24%  Similarity=0.361  Sum_probs=73.1

Q ss_pred             CCcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            6 KPGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +.++||++||..+..+.++ ...|++||++++++++.++. +...+|++++|+||+++|++......     .....+++
T Consensus       131 ~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~  205 (248)
T PRK08251        131 GSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-----TPFMVDTE  205 (248)
T ss_pred             CCCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-----CCccCCHH
Confidence            4579999999998888775 68999999999999999998 88899999999999999998754321     12357899


Q ss_pred             HHHHHHHHhhcCCC
Q 023465           84 MVVKGAFELITDES   97 (282)
Q Consensus        84 ~~a~~~~~l~~~~~   97 (282)
                      +.++.++..++...
T Consensus       206 ~~a~~i~~~~~~~~  219 (248)
T PRK08251        206 TGVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999887544

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=1.2e-09  Score=92.82  Aligned_cols=91  Identities=27%  Similarity=0.293  Sum_probs=75.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.+....|++||+++..|++.++. +.++||++++|.||++.|++........ .......++++
T Consensus       134 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~  212 (239)
T PRK07666        134 QSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-GNPDKVMQPED  212 (239)
T ss_pred             CCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-cCCCCCCCHHH
Confidence            358999999999998989999999999999999999998 9999999999999999999864321111 11234578999


Q ss_pred             HHHHHHHhhcCCC
Q 023465           85 VVKGAFELITDES   97 (282)
Q Consensus        85 ~a~~~~~l~~~~~   97 (282)
                      +++.++.+++...
T Consensus       213 ~a~~~~~~l~~~~  225 (239)
T PRK07666        213 LAEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.00  E-value=8.1e-10  Score=94.78  Aligned_cols=88  Identities=36%  Similarity=0.430  Sum_probs=75.4

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCC
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGF   79 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~   79 (282)
                      |.+++ .|-|||+||.++..+.|.++.|++||+.+..|+++|+. ++.+||.|.+|.|++|-|+|..-...     .--.
T Consensus       174 M~~r~-~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~-----sl~~  247 (312)
T KOG1014|consen  174 MVERK-KGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP-----SLFV  247 (312)
T ss_pred             hhcCC-CceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCC-----CCcC
Confidence            44444 59999999999999999999999999999999999998 99999999999999999999754221     1234


Q ss_pred             CCHHHHHHHHHHhhc
Q 023465           80 VPMEMVVKGAFELIT   94 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~   94 (282)
                      .+||..++..+.-+.
T Consensus       248 ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  248 PSPETFAKSALNTIG  262 (312)
T ss_pred             cCHHHHHHHHHhhcC
Confidence            689999998887776

>PRK06194 hypothetical protein; Provisional

Probab=98.98  E-value=1.5e-09  Score=94.75  Aligned_cols=90  Identities=31%  Similarity=0.364  Sum_probs=70.7

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhH---HH---------
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVAS---KF---------   72 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~---~~---------   72 (282)
                      |+||++||.++..+.++.+.|++||+++++|+++++. +.  ..+||+|+++||+++|++......   ..         
T Consensus       141 g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~  220 (287)
T PRK06194        141 GHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRS  220 (287)
T ss_pred             eEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccch
Confidence            7999999999998889999999999999999999987 66  467999999999999998643210   00         


Q ss_pred             -------Hhh--hCCCCCHHHHHHHHHHhhcCCC
Q 023465           73 -------IDL--MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 -------~~~--~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                             ...  .....+++|+|+.++..+.+..
T Consensus       221 ~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~~~~  254 (287)
T PRK06194        221 QLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRAGR  254 (287)
T ss_pred             hhHHHHHHHhhhhccCCCHHHHHHHHHHHHHcCC
Confidence                   000  0123699999999999875443

>PRK06197 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.9e-09  Score=95.09  Aligned_cols=104  Identities=15%  Similarity=0.111  Sum_probs=72.8

Q ss_pred             CCcEEEEEcCCCccC-------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEE--eCCcccCcchhhhh
Q 023465            6 KPGVIINMGSSAGLY-------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL--CPEFVQTEMGLKVA   69 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~-------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i--~PG~v~T~~~~~~~   69 (282)
                      +.++||++||.++..             +.++...|++||++++.|++.++. ++++||+|+++  +||+++|+|.....
T Consensus       143 ~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~  222 (306)
T PRK06197        143 PGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP  222 (306)
T ss_pred             CCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc
Confidence            357999999987543             234567899999999999999998 98888877766  69999999876432


Q ss_pred             HHHHh---hhC--CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           70 SKFID---LMG--GFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        70 ~~~~~---~~~--~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .....   ...  ...++++-+...++++.+.+ ..+|.++..++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~~~~~~~  267 (306)
T PRK06197        223 RALRPVATVLAPLLAQSPEMGALPTLRAATDPA-VRGGQYYGPDGF  267 (306)
T ss_pred             HHHHHHHHHHHhhhcCCHHHHHHHHHHHhcCCC-cCCCeEEccCcc
Confidence            21111   111  13467877878887776543 345666665554

>PRK08017 oxidoreductase; Provisional

Probab=98.95  E-value=3.4e-09  Score=90.80  Aligned_cols=94  Identities=19%  Similarity=0.182  Sum_probs=76.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----HH-hh-h-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----FI-DL-M-   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~-~~-~-   76 (282)
                      +.++||++||..+..+.+....|++||++++.|+++++. +..++|++++|+||+++|++.......     .. .. . 
T Consensus       124 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  203 (256)
T PRK08017        124 GEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAA  203 (256)
T ss_pred             CCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHh
Confidence            347999999999988889999999999999999999998 888999999999999999986542111     00 00 1 


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCc
Q 023465           77 GGFVPMEMVVKGAFELITDESKA   99 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~   99 (282)
                      .....++|+++.+..++++.+..
T Consensus       204 ~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        204 RFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             hcCCCHHHHHHHHHHHHhCCCCC
Confidence            23579999999999999876643

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.92  E-value=4.1e-09  Score=90.33  Aligned_cols=90  Identities=20%  Similarity=0.194  Sum_probs=70.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----------Hh-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----------ID-   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----------~~-   74 (282)
                      .|+||++||..+..+.++...|++||+++++|+++++. +.+.||++++|+||++.|++.....+..          .. 
T Consensus       124 ~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  203 (257)
T PRK09291        124 KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDP  203 (257)
T ss_pred             CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhh
Confidence            48999999999988888899999999999999999998 8899999999999999998754221110          00 


Q ss_pred             ----hhCCCCCHHHHHHHHHHhhcCC
Q 023465           75 ----LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        75 ----~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                          ......+++++++.+..++..+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        204 EDLAFPLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             hhhhccccCCCHHHHHHHHHHHhcCC
Confidence                1112357888888888776543

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.89  E-value=8.2e-09  Score=87.32  Aligned_cols=89  Identities=25%  Similarity=0.294  Sum_probs=74.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      .|+||++||.++..+.+....|+++|++++++++.++. +...|+++++|.||++.|++......+.   .....+++++
T Consensus       132 ~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~d~  208 (237)
T PRK07326        132 GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK---DAWKIQPEDI  208 (237)
T ss_pred             CeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh---hhccCCHHHH
Confidence            47999999998888888889999999999999999988 8889999999999999998764422111   1123689999


Q ss_pred             HHHHHHhhcCCCC
Q 023465           86 VKGAFELITDESK   98 (282)
Q Consensus        86 a~~~~~l~~~~~~   98 (282)
                      ++.++++++....
T Consensus       209 a~~~~~~l~~~~~  221 (237)
T PRK07326        209 AQLVLDLLKMPPR  221 (237)
T ss_pred             HHHHHHHHhCCcc
Confidence            9999999987654

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.88  E-value=1.1e-08  Score=88.72  Aligned_cols=92  Identities=16%  Similarity=0.207  Sum_probs=73.1

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-------------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-------------   70 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-------------   70 (282)
                      ++.++||++||..+..+.++.+.|++||++++.|+++++. +.++||+++.+.||++.|++......             
T Consensus       125 ~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  204 (276)
T PRK06482        125 QGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVG  204 (276)
T ss_pred             cCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhH
Confidence            3458999999999888889999999999999999999998 98999999999999999987532110             


Q ss_pred             HHHhh-----hCCCCCHHHHHHHHHHhhcCC
Q 023465           71 KFIDL-----MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        71 ~~~~~-----~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      .+...     ..-..++++++++++..+...
T Consensus       205 ~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~  235 (276)
T PRK06482        205 DLRRALADGSFAIPGDPQKMVQAMIASADQT  235 (276)
T ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHHHcCC
Confidence            11111     112368999999999988644

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.8e-08  Score=84.59  Aligned_cols=93  Identities=19%  Similarity=0.182  Sum_probs=72.6

Q ss_pred             CcEEEEEcCCCccCCCCCC---hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            7 PGVIINMGSSAGLYPMYND---PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~---~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      .|+|+++||.++..+....   ..|+++|++++.+++.++. +  .+++||+|+||+++|++...         .....+
T Consensus       122 ~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~---------~~~~~~  190 (222)
T PRK06953        122 GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGA---------QAALDP  190 (222)
T ss_pred             CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC---------CCCCCH
Confidence            5899999998876553322   3599999999999999986 5  36999999999999998643         224688


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ++.+..++.++.......++.++..++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        191 AQSVAGMRRVIAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             HHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence            9999999998877666667777754443

>PRK08264 short chain dehydrogenase; Validated

Probab=98.81  E-value=1.8e-08  Score=85.37  Aligned_cols=85  Identities=21%  Similarity=0.223  Sum_probs=72.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.++||++||..+..+.++...|+++|++++.|++.++. +.+.||+++++.||.++|++.....       ....++++
T Consensus       124 ~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~-------~~~~~~~~  196 (238)
T PRK08264        124 GGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-------APKASPAD  196 (238)
T ss_pred             CCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC-------cCCCCHHH
Confidence            358999999999988889999999999999999999998 8889999999999999999854321       12578999


Q ss_pred             HHHHHHHhhcCCC
Q 023465           85 VVKGAFELITDES   97 (282)
Q Consensus        85 ~a~~~~~l~~~~~   97 (282)
                      +++.++..+....
T Consensus       197 ~a~~~~~~~~~~~  209 (238)
T PRK08264        197 VARQILDALEAGD  209 (238)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999998886543

>PRK09135 pteridine reductase; Provisional

Probab=98.81  E-value=2.2e-08  Score=85.22  Aligned_cols=102  Identities=19%  Similarity=0.240  Sum_probs=76.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH----H--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF----I--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~----~--~~~~~   78 (282)
                      .|.+++++|..+..+.++...|++||++++.+++.++. +.+ +|+++++.||++.|++.... ....    .  .++..
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T PRK09135        135 RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR  213 (249)
T ss_pred             CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC
Confidence            47899999888878888899999999999999999998 754 69999999999999875321 1111    1  12344


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+++|+++++.+++.+. ...+|..+..+++
T Consensus       214 ~~~~~d~a~~~~~~~~~~-~~~~g~~~~i~~g  244 (249)
T PRK09135        214 IGTPEDIAEAVRFLLADA-SFITGQILAVDGG  244 (249)
T ss_pred             CcCHHHHHHHHHHHcCcc-ccccCcEEEECCC
Confidence            578999999998888753 3345555555554

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.81  E-value=9.1e-09  Score=88.37  Aligned_cols=98  Identities=17%  Similarity=0.162  Sum_probs=78.7

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---hHHH---H
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---ASKF---I   73 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---~~~~---~   73 (282)
                      |+++.+.|+|+.+||.++..+..+.+.|++||+|+.+|..+|+. +.++||+|.+..|+.+.||-..+.   .++.   .
T Consensus       158 mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii  237 (331)
T KOG1210|consen  158 MKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKII  237 (331)
T ss_pred             hhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeee
Confidence            44445467999999999999999999999999999999999998 999999999999999999976432   1111   1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                      +......++|+.+.+++.=+...+.
T Consensus       238 ~g~ss~~~~e~~a~~~~~~~~rg~f  262 (331)
T KOG1210|consen  238 EGGSSVIKCEEMAKAIVKGMKRGNF  262 (331)
T ss_pred             cCCCCCcCHHHHHHHHHhHHhhcCe
Confidence            1234567899999999877655543

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.3e-08  Score=83.90  Aligned_cols=90  Identities=19%  Similarity=0.149  Sum_probs=73.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH--HhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF--IDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~~   83 (282)
                      .++||++||..+..+.++...|+++|++++++++.++. +... |++++|.||+++|++........  .....++.+++
T Consensus       121 ~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (227)
T PRK08219        121 HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPE  199 (227)
T ss_pred             CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHH
Confidence            47999999999988888899999999999999999987 6666 99999999999998754332211  11224568999


Q ss_pred             HHHHHHHHhhcCCC
Q 023465           84 MVVKGAFELITDES   97 (282)
Q Consensus        84 ~~a~~~~~l~~~~~   97 (282)
                      |+++.++++++...
T Consensus       200 dva~~~~~~l~~~~  213 (227)
T PRK08219        200 TVAKAVRFAVDAPP  213 (227)
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999997654

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.1e-08  Score=88.84  Aligned_cols=99  Identities=20%  Similarity=0.128  Sum_probs=69.4

Q ss_pred             CcEEEEEcCCCccCC------------CCCChhhHhhHHHHHHHHHHhcc-c--cCCCcEEEEEeCCcccCcchhhhh--
Q 023465            7 PGVIINMGSSAGLYP------------MYNDPIYSASKGGVVLFTRSLTP-Y--KRKGIRINVLCPEFVQTEMGLKVA--   69 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~~t~~la~-~--~~~gI~v~~i~PG~v~T~~~~~~~--   69 (282)
                      .|+||++||.++..+            .++...|+.||+|+..|++.|+. +  ..+||+||+++||+++|++.....  
T Consensus       142 ~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~  221 (313)
T PRK05854        142 RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEV  221 (313)
T ss_pred             CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccccccc
Confidence            489999999887543            24567899999999999999975 4  467999999999999999863210  


Q ss_pred             --------HHHHhhh---C-CCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           70 --------SKFIDLM---G-GFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        70 --------~~~~~~~---~-~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                              ......+   . -..++++-+...++++.+.... +|.++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~-~g~~~~  269 (313)
T PRK05854        222 GRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDAE-GGAFYG  269 (313)
T ss_pred             ccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCCC-CCcEEC
Confidence                    0111111   1 1347888888888887654432 244443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.76  E-value=1.1e-08  Score=82.74  Aligned_cols=59  Identities=29%  Similarity=0.505  Sum_probs=55.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE   63 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~   63 (282)
                      ++.+.|||+||..++.|+...+.||++|||++.||.+|+. ++.++|+|.-+.|-.|+|.
T Consensus       129 q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         129 QPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             CCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            3458999999999999999999999999999999999999 9999999999999999996

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.74  E-value=5.1e-08  Score=83.40  Aligned_cols=80  Identities=21%  Similarity=0.173  Sum_probs=59.3

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHH---HHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFT---RSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t---~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +.|++.+|.++..+ ++.+.|++||+|+..+.   +.++. +.+.+|+|++++||+++|++..          ....+||
T Consensus       131 ~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~----------~~~~~~~  199 (245)
T PRK12367        131 KEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP----------IGIMSAD  199 (245)
T ss_pred             eEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc----------cCCCCHH
Confidence            34544556655544 46778999999986544   45544 5788999999999999999742          1357899


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      ++|+.+++.++....
T Consensus       200 ~vA~~i~~~~~~~~~  214 (245)
T PRK12367        200 FVAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999976554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.69  E-value=6.8e-08  Score=85.88  Aligned_cols=82  Identities=26%  Similarity=0.345  Sum_probs=59.3

Q ss_pred             ChhhHhhHHHHHHHHHHhcc-cc-CCCcEEEEEeCCcc-cCcchhhhhHH-------HHh-hhCCCCCHHHHHHHHHHhh
Q 023465           25 DPIYSASKGGVVLFTRSLTP-YK-RKGIRINVLCPEFV-QTEMGLKVASK-------FID-LMGGFVPMEMVVKGAFELI   93 (282)
Q Consensus        25 ~~~Y~asKaal~~~t~~la~-~~-~~gI~v~~i~PG~v-~T~~~~~~~~~-------~~~-~~~~~~~~~~~a~~~~~l~   93 (282)
                      ...|+.||.+...|++.++. +. .+||+||+++||+| .|++.......       +.. ......++++.++.+++++
T Consensus       190 ~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (322)
T PRK07453        190 GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVV  269 (322)
T ss_pred             cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhh
Confidence            46799999999999999988 74 57999999999999 69886432211       011 1122357888888888887


Q ss_pred             cCCCCceEEEEEe
Q 023465           94 TDESKAGSCLWIT  106 (282)
Q Consensus        94 ~~~~~~~~~~~~~  106 (282)
                      .+.....+|.++.
T Consensus       270 ~~~~~~~~G~y~~  282 (322)
T PRK07453        270 ADPEFAQSGVHWS  282 (322)
T ss_pred             cCcccCCCCceee
Confidence            7665545676665

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.26  E-value=3.5e-06  Score=77.03  Aligned_cols=77  Identities=17%  Similarity=0.164  Sum_probs=57.0

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHHH
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVK   87 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a~   87 (282)
                      +.+||+|| ++ ...+..+.|++||+|+.+|++ ++.. ..++.|..++||+++|++..          ....+||++|+
T Consensus       298 ~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~-~~~~~I~~i~~gp~~t~~~~----------~~~~spe~vA~  363 (406)
T PRK07424        298 EVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRL-DAPCVVRKLILGPFKSNLNP----------IGVMSADWVAK  363 (406)
T ss_pred             eEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHh-CCCCceEEEEeCCCcCCCCc----------CCCCCHHHHHH
Confidence            45677765 33 333556789999999999985 4332 24577788899999998742          13479999999


Q ss_pred             HHHHhhcCCCC
Q 023465           88 GAFELITDESK   98 (282)
Q Consensus        88 ~~~~l~~~~~~   98 (282)
                      .+++.++.+..
T Consensus       364 ~il~~i~~~~~  374 (406)
T PRK07424        364 QILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHCCCC
Confidence            99999987765

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.14  E-value=8.6e-06  Score=75.82  Aligned_cols=81  Identities=17%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      ..|+||+++|.....   ....|+++|+++.+|+|+++. + +++|++|+|.|++                    .++++
T Consensus       115 ~~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~--------------------~~~~~  170 (450)
T PRK08261        115 PCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP--------------------GAEAG  170 (450)
T ss_pred             CCCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC--------------------CCHHH
Confidence            358999999987653   345799999999999999998 8 7899999999975                    35778


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +++.+.|++++.+.+.++..+..++.
T Consensus       171 ~~~~~~~l~s~~~a~~~g~~i~~~~~  196 (450)
T PRK08261        171 LESTLRFFLSPRSAYVSGQVVRVGAA  196 (450)
T ss_pred             HHHHHHHhcCCccCCccCcEEEecCC
Confidence            88899999998888888777766654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.08  E-value=1.8e-05  Score=74.66  Aligned_cols=101  Identities=13%  Similarity=0.036  Sum_probs=73.3

Q ss_pred             CcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HH----H-HhhhCC
Q 023465            7 PGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SK----F-IDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~----~-~~~~~~   78 (282)
                      .++||++||..+. .+.+.. .|. +|+++..+.+.+.. +...||++|.|+||++.|++..... ..    . ...+++
T Consensus       200 VgRIV~VSSiga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr  277 (576)
T PLN03209        200 VNHFILVTSLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGG  277 (576)
T ss_pred             CCEEEEEccchhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCC
Confidence            4799999998764 333332 354 89999999999988 8899999999999999887643110 00    0 123456


Q ss_pred             CCCHHHHHHHHHHhhcCC-CCceEEEEEecCC
Q 023465           79 FVPMEMVVKGAFELITDE-SKAGSCLWITNRR  109 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g  109 (282)
                      ..+.+|+|+.++++++++ ..+++...+..+.
T Consensus       278 ~isreDVA~vVvfLasd~~as~~kvvevi~~~  309 (576)
T PLN03209        278 QVSNLQVAELMACMAKNRRLSYCKVVEVIAET  309 (576)
T ss_pred             ccCHHHHHHHHHHHHcCchhccceEEEEEeCC
Confidence            689999999999999965 4667777666554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.00  E-value=1.7e-05  Score=70.07  Aligned_cols=99  Identities=19%  Similarity=0.163  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCCccCC-------------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc-chhh--hh
Q 023465            7 PGVIINMGSSAGLYP-------------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE-MGLK--VA   69 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-------------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~-~~~~--~~   69 (282)
                      .+||||+||..+...             .....+|+.||-++..+++.|+. +.+ ||.+++++||.++|+ +.+.  ..
T Consensus       163 ~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~  241 (314)
T KOG1208|consen  163 PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLL  241 (314)
T ss_pred             CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHH
Confidence            489999999876110             22233599999999999999998 877 999999999999999 4430  11


Q ss_pred             HHHHhhhCC--CCCHHHHHHHHHHhhcCCCC-ceEEEEEe
Q 023465           70 SKFIDLMGG--FVPMEMVVKGAFELITDESK-AGSCLWIT  106 (282)
Q Consensus        70 ~~~~~~~~~--~~~~~~~a~~~~~l~~~~~~-~~~~~~~~  106 (282)
                      ..+...+..  ..++++-|+..++.+.+.+. ..+|.++.
T Consensus       242 ~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~  281 (314)
T KOG1208|consen  242 RLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFE  281 (314)
T ss_pred             HHHHHHHHHHhccCHHHHhhheehhccCccccCccccccc
Confidence            111111111  24789999999998877654 34555543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.75  E-value=3.7e-05  Score=83.94  Aligned_cols=58  Identities=14%  Similarity=0.023  Sum_probs=53.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~   66 (282)
                      .++|||+||.++.++.++++.|+++|++|+.|++.++. +.  ++|||+|+||+++|+|..
T Consensus      2168 ~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2168 IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            36899999999999999999999999999999999987 63  499999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.60  E-value=0.00035  Score=54.81  Aligned_cols=90  Identities=20%  Similarity=0.203  Sum_probs=71.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc---ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~---~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|-+-..+..++.-+.|++..|+.+|+|++.++++|+.   --+.|-.+..|.|=-.+|||.+...++.  ....+.+.+
T Consensus       122 GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A--DfssWTPL~  199 (236)
T KOG4022|consen  122 GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA--DFSSWTPLS  199 (236)
T ss_pred             CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC--cccCcccHH
Confidence            45444555566678899999999999999999999974   3367889999999999999987765432  234578899


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      .+++.++....+.++
T Consensus       200 fi~e~flkWtt~~~R  214 (236)
T KOG4022|consen  200 FISEHFLKWTTETSR  214 (236)
T ss_pred             HHHHHHHHHhccCCC
Confidence            999999999887665

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.49  E-value=0.00029  Score=63.48  Aligned_cols=89  Identities=11%  Similarity=0.002  Sum_probs=69.6

Q ss_pred             CcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HH---HHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SK---FIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~---~~~~~~   77 (282)
                      ++++|..|++.+....|.+  ..-+.+|++|+.-+|.|+. |++.|||+|++..|++.|.-....+   ..   .-+-|+
T Consensus       217 g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk  296 (398)
T PRK13656        217 GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMK  296 (398)
T ss_pred             CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcCCCcHHHHHHHHHHHH
Confidence            5899999999888777766  5889999999999999999 9999999999999999998654321   11   112344


Q ss_pred             CCCCHHHHHHHHHHhhcC
Q 023465           78 GFVPMEMVVKGAFELITD   95 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~   95 (282)
                      ..++.|.+.+.+..|.++
T Consensus       297 ~~g~he~~ieq~~rl~~~  314 (398)
T PRK13656        297 EKGTHEGCIEQIYRLFSE  314 (398)
T ss_pred             hcCCCCChHHHHHHHHHH
Confidence            556677777777777654

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.35  E-value=0.001  Score=59.18  Aligned_cols=86  Identities=13%  Similarity=0.060  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcc------hhhhhHHHH--hhh-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM------GLKVASKFI--DLM-   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~------~~~~~~~~~--~~~-   76 (282)
                      .++||++||.....+   ...|++||++.+.++++++. ...+|++++++.||.+..+-      .........  .++ 
T Consensus       117 ~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~  193 (324)
T TIGR03589       117 VKRVVALSTDKAANP---INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT  193 (324)
T ss_pred             CCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC
Confidence            468999999755433   46799999999999999887 77889999999999997541      111100000  011 


Q ss_pred             -----CCCCCHHHHHHHHHHhhcC
Q 023465           77 -----GGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        77 -----~~~~~~~~~a~~~~~l~~~   95 (282)
                           ..+..++|++++++.++..
T Consensus       194 ~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       194 DPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhh
Confidence                 1257899999999998865

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.49  E-value=0.0098  Score=50.78  Aligned_cols=95  Identities=13%  Similarity=0.017  Sum_probs=58.9

Q ss_pred             CcEEEEEcCCCcc---CCCCCChhhHhhHHHHHHH-HHHhcc--ccCCCcEEEEEeCCcccCcchhhhhH--HHHhhhCC
Q 023465            7 PGVIINMGSSAGL---YPMYNDPIYSASKGGVVLF-TRSLTP--YKRKGIRINVLCPEFVQTEMGLKVAS--KFIDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~---~~~~~~~~Y~asKaal~~~-t~~la~--~~~~gI~v~~i~PG~v~T~~~~~~~~--~~~~~~~~   78 (282)
                      .++||++||....   .+.+....|.+.|.....+ .+....  +...|++++.|.||++.++.......  ........
T Consensus       124 ~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~  203 (251)
T PLN00141        124 VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEG  203 (251)
T ss_pred             CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccC
Confidence            4799999998642   1233445677766544433 333333  56789999999999997764321100  00001123


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceE
Q 023465           79 FVPMEMVVKGAFELITDESKAGS  101 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~  101 (282)
                      ..+++++|+.++.++........
T Consensus       204 ~i~~~dvA~~~~~~~~~~~~~~~  226 (251)
T PLN00141        204 SISRDQVAEVAVEALLCPESSYK  226 (251)
T ss_pred             cccHHHHHHHHHHHhcChhhcCc
Confidence            57999999999999876554333

>PLN02583 cinnamoyl-CoA reductase

Probab=95.43  E-value=0.066  Score=46.93  Aligned_cols=90  Identities=10%  Similarity=-0.015  Sum_probs=57.9

Q ss_pred             CcEEEEEcCCCccCCC-C-------------CC--------hhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcc
Q 023465            7 PGVIINMGSSAGLYPM-Y-------------ND--------PIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM   64 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-~-------------~~--------~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~   64 (282)
                      .++||++||.++.... +             ..        ..|+.||...+.+.+.++.  .+|+++++|.|+.+-.+.
T Consensus       120 v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~--~~gi~~v~lrp~~v~Gp~  197 (297)
T PLN02583        120 IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAM--DRGVNMVSINAGLLMGPS  197 (297)
T ss_pred             ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHH--HhCCcEEEEcCCcccCCC
Confidence            3699999998664211 0             00        1588888888777765532  348999999999997664


Q ss_pred             hhhhhHHHH-------hhhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           65 GLKVASKFI-------DLMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        65 ~~~~~~~~~-------~~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                      .........       .....+.+.+|+|++.+.+++....
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~  238 (297)
T PLN02583        198 LTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSS  238 (297)
T ss_pred             CCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCccc
Confidence            321111000       0112367899999999999975443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.11  E-value=0.032  Score=50.09  Aligned_cols=57  Identities=23%  Similarity=0.228  Sum_probs=43.5

Q ss_pred             CcEEEEEcCCCccC------------CCCCChhhHhhHHHHHHHHHHhcc-ccC----CCcEEEEEeCCcccCc
Q 023465            7 PGVIINMGSSAGLY------------PMYNDPIYSASKGGVVLFTRSLTP-YKR----KGIRINVLCPEFVQTE   63 (282)
Q Consensus         7 ~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~~t~~la~-~~~----~gI~v~~i~PG~v~T~   63 (282)
                      .+++|++||.....            +..+...|+.||.+.+.+++.++. +.+    .+++++.+.|+.+--+
T Consensus       119 ~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp  192 (349)
T TIGR02622       119 VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG  192 (349)
T ss_pred             CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence            36899999964321            123456899999999999999877 644    4899999999987543

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=93.77  E-value=0.23  Score=44.31  Aligned_cols=87  Identities=13%  Similarity=0.177  Sum_probs=56.4

Q ss_pred             cEEEEEcCCCccCCC----------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh-----
Q 023465            8 GVIINMGSSAGLYPM----------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL-----   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~~----------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~-----   66 (282)
                      .+++++||.......                .....|+.||.+.+.+.+.++   ..|++++.+.||.+..+...     
T Consensus       129 ~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~g~~~~i~Rpg~v~G~~~~g~~~~  205 (367)
T TIGR01746       129 KPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS---DRGLPVTIVRPGRILGNSYTGAINS  205 (367)
T ss_pred             ceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH---hcCCCEEEECCCceeecCCCCCCCc
Confidence            459999998664321                113469999999998877643   34899999999998654110     


Q ss_pred             -hhhHHH----Hh----h-----hCCCCCHHHHHHHHHHhhcCCC
Q 023465           67 -KVASKF----ID----L-----MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 -~~~~~~----~~----~-----~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                       ......    ..    +     ...+...++++++++.++....
T Consensus       206 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~  250 (367)
T TIGR01746       206 SDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPA  250 (367)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCC
Confidence             000000    00    0     1225788999999999887654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.67  E-value=0.32  Score=42.99  Aligned_cols=88  Identities=20%  Similarity=0.185  Sum_probs=58.2

Q ss_pred             cEEEEEcCCCccC-CC----------------C-----CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch
Q 023465            8 GVIINMGSSAGLY-PM----------------Y-----NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG   65 (282)
Q Consensus         8 g~Iv~isS~~~~~-~~----------------~-----~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~   65 (282)
                      ++||++||.+... +.                |     ....|++||.+.+.+.+.+..  ..+++++.+.|+.+-.+..
T Consensus       121 ~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~--~~~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        121 KRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAK--DNGIDMVVLNPGFICGPLL  198 (322)
T ss_pred             cEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHH--HhCCeEEEEcccceeCCCC
Confidence            5899999986531 11                0     135699999988887776543  3489999999999876643


Q ss_pred             hhh----h---HHHHh-------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           66 LKV----A---SKFID-------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        66 ~~~----~---~~~~~-------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ...    .   ..+..       ....+...+|+|++++.++....
T Consensus       199 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~  244 (322)
T PLN02986        199 QPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS  244 (322)
T ss_pred             CCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc
Confidence            210    0   01100       01235789999999999987653

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=93.62  E-value=0.42  Score=34.68  Aligned_cols=70  Identities=20%  Similarity=0.231  Sum_probs=41.1

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC----CCCCCCeeEEccCCcc------c
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN----NVKVGTPAAIMTFGSY------A  215 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~----~~~~Gd~V~~~~~G~~------a  215 (282)
                      |--+-|||+... .-...-+.+......   .-|      ..|+|+++|++..    .+|+||+|+...+++-      .
T Consensus        14 PL~dRVLVk~~~~e~kT~gGIiLP~sak---ekp------~~g~VvAVG~G~~~~~~~Vk~GD~Vl~~~y~Gtevk~dg~   84 (100)
T PTZ00414         14 PLGQRVLVKRTLAAKQTKAGVLIPEQVA---GKV------NEGTVVAVAAATKDWTPTVKVGDTVLLPEFGGSSVKVEGE   84 (100)
T ss_pred             ecCCEEEEEEcccccccccCEEcccccc---cCC------ceeEEEEECCCCccccceecCCCEEEEcCCCCcEEEECCE
Confidence            556789988765 222222222222111   122      2599999999854    4999999998755321      4


Q ss_pred             cEEeecCCCe
Q 023465          216 EFTMVPSKHI  225 (282)
Q Consensus       216 e~~~v~~~~~  225 (282)
                      ||+++.++.+
T Consensus        85 ey~i~~e~DI   94 (100)
T PTZ00414         85 EFFLYNEDSL   94 (100)
T ss_pred             EEEEEEhHHE
Confidence            5666665544

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=93.09  E-value=0.53  Score=33.61  Aligned_cols=70  Identities=17%  Similarity=0.289  Sum_probs=41.7

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC----CCCCCCeeEEccCCcc------c
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN----NVKVGTPAAIMTFGSY------A  215 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~----~~~~Gd~V~~~~~G~~------a  215 (282)
                      |--+-||||... .-...-+.+......   .-|      ..|+|+++|++..    .+++||+|....+++.      .
T Consensus         5 Pl~DRVLVk~~~~e~~T~gGI~Lp~~a~---ek~------~~G~VvavG~g~~~~~~~Vk~GD~Vl~~~y~g~ev~~~~~   75 (91)
T PRK14533          5 PLGERLLIKPIKEEKKTEGGIVLPDSAK---EKP------MKAEVVAVGKLDDEEDFDIKVGDKVIFSKYAGTEIKIDDE   75 (91)
T ss_pred             EcCCEEEEEEccccceecccEEeccccc---CCc------ceEEEEEECCCCccccccccCCCEEEEccCCCeEEEECCE
Confidence            345778888765 333333333322211   112      4699999997642    4999999998755432      4


Q ss_pred             cEEeecCCCe
Q 023465          216 EFTMVPSKHI  225 (282)
Q Consensus       216 e~~~v~~~~~  225 (282)
                      +|..++++.+
T Consensus        76 ~y~iv~e~DI   85 (91)
T PRK14533         76 DYIIIDVNDI   85 (91)
T ss_pred             EEEEEEhHhE
Confidence            6666666554

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=92.94  E-value=0.15  Score=36.77  Aligned_cols=40  Identities=25%  Similarity=0.415  Sum_probs=27.7

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCeeEEccCCcc------ccEEeecCCCe
Q 023465          186 AVGLIAAVGDSVN---------NVKVGTPAAIMTFGSY------AEFTMVPSKHI  225 (282)
Q Consensus       186 ~~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~~------ae~~~v~~~~~  225 (282)
                      ..|+|+++|++..         .+++||+|....+++.      .+|..++++.+
T Consensus        36 ~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~~~~g~ev~~~~~~y~iv~~~DI   90 (95)
T PRK00364         36 QEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFGKYAGTEVKIDGEEYLILRESDI   90 (95)
T ss_pred             ceEEEEEECCCeECCCCCEeecccCCCCEEEEcCCCCeEEEECCEEEEEEEHHHE
Confidence            4799999999653         4999999998765433      34555554433

>PLN02650 dihydroflavonol-4-reductase

Probab=92.78  E-value=0.38  Score=43.09  Aligned_cols=70  Identities=14%  Similarity=0.166  Sum_probs=48.2

Q ss_pred             hhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh-----hhHHHH----h-------hhCCCCCHHHHHHHH
Q 023465           26 PIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK-----VASKFI----D-------LMGGFVPMEMVVKGA   89 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~-----~~~~~~----~-------~~~~~~~~~~~a~~~   89 (282)
                      ..|+.||.+.+.+.+.++.  .+|++++.+.|+.+-.+....     ......    .       ....+...+|+++++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~--~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAA--ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAH  238 (351)
T ss_pred             chHHHHHHHHHHHHHHHHH--HcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHH
Confidence            3799999999998887643  358999999999887664211     110000    0       012467899999999


Q ss_pred             HHhhcCCC
Q 023465           90 FELITDES   97 (282)
Q Consensus        90 ~~l~~~~~   97 (282)
                      ++++....
T Consensus       239 ~~~l~~~~  246 (351)
T PLN02650        239 IFLFEHPA  246 (351)
T ss_pred             HHHhcCcC
Confidence            99987543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=91.60  E-value=0.46  Score=41.98  Aligned_cols=89  Identities=17%  Similarity=0.147  Sum_probs=57.0

Q ss_pred             CcEEEEEcCCCccCCC--------------CC--------ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcc
Q 023465            7 PGVIINMGSSAGLYPM--------------YN--------DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM   64 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~--------------~~--------~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~   64 (282)
                      .++||++||.++..+.              +.        ...|+.||.+.+.+.+.+..  ..|+.++.+.|+.+--+.
T Consensus       121 ~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        121 VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAK--DNEIDLIVLNPGLVTGPI  198 (325)
T ss_pred             ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHH--HcCCeEEEEcCCceeCCC
Confidence            4689999998654321              00        24699999999888877643  347899999999885543


Q ss_pred             hhh---hh-HHHHh------hh----CCCCCHHHHHHHHHHhhcCCC
Q 023465           65 GLK---VA-SKFID------LM----GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        65 ~~~---~~-~~~~~------~~----~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ...   .. ..+..      +.    .++...+|++++++.++....
T Consensus       199 ~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~  245 (325)
T PLN02989        199 LQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS  245 (325)
T ss_pred             CCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcc
Confidence            211   00 01111      11    134568999999999887543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=91.57  E-value=0.61  Score=41.53  Aligned_cols=88  Identities=16%  Similarity=0.140  Sum_probs=53.5

Q ss_pred             EEEEEcCCCcc--C--------CCCCChhhHhhHHHHHHHHHHhcc-cc---CCCcEEEEEeCCcccCcchh---hhhHH
Q 023465            9 VIINMGSSAGL--Y--------PMYNDPIYSASKGGVVLFTRSLTP-YK---RKGIRINVLCPEFVQTEMGL---KVASK   71 (282)
Q Consensus         9 ~Iv~isS~~~~--~--------~~~~~~~Y~asKaal~~~t~~la~-~~---~~gI~v~~i~PG~v~T~~~~---~~~~~   71 (282)
                      ++|++||....  .        +......|+.||.+.+.+++.++. +.   ..++..|.+.|+...+-+..   .....
T Consensus       133 ~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~  212 (340)
T PLN02653        133 KYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGR  212 (340)
T ss_pred             eEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHH
Confidence            68888775321  1        111356899999999999999875 53   23566677778754432211   10000


Q ss_pred             HHh------------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           72 FID------------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        72 ~~~------------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ...            ....+.-.+|++++++.++...
T Consensus       213 ~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        213 IKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            000            1124568999999999998753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=91.51  E-value=0.21  Score=47.13  Aligned_cols=28  Identities=32%  Similarity=0.318  Sum_probs=24.8

Q ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          253 GPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       253 ~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      +..++++|+|.|+ |.+|+++++.|+.+.
T Consensus       161 G~~pg~kVlViGa-G~iGL~Ai~~Ak~lG  188 (509)
T PRK09424        161 GKVPPAKVLVIGA-GVAGLAAIGAAGSLG  188 (509)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCC
Confidence            3468999999999 999999999999763

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=91.05  E-value=0.37  Score=34.55  Aligned_cols=57  Identities=21%  Similarity=0.213  Sum_probs=34.5

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCC---------CCCCCCCeeEEccCC
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV---------NNVKVGTPAAIMTFG  212 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v---------~~~~~Gd~V~~~~~G  212 (282)
                      |-.+-|||+... .-...-+.+......         .--..|+|+++|++.         ..+++||+|....++
T Consensus         4 Pl~DrVLV~~~~~e~~T~~GI~Lp~~~~---------~k~~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~~~~   70 (93)
T cd00320           4 PLGDRVLVKRIEAEEKTKGGIILPDSAK---------EKPQEGKVVAVGPGRRNENGERVPLSVKVGDKVLFPKYA   70 (93)
T ss_pred             ecCCEEEEEEccccceecceEEeCCCcC---------CCceEEEEEEECCCeECCCCCCccccccCCCEEEECCCC
Confidence            445778888765 222222222221111         122579999999973         359999999977554

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=91.00  E-value=0.24  Score=40.12  Aligned_cols=51  Identities=14%  Similarity=0.079  Sum_probs=40.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCc
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEF   59 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~   59 (282)
                      +-..+|..||+++..+.++++.|+++.+.++.|++..+.   .|..+.+|.-|.
T Consensus       127 ~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~---~g~~~~sI~wg~  177 (181)
T PF08659_consen  127 PLDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRS---RGLPAVSINWGA  177 (181)
T ss_dssp             TTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHH---TTSEEEEEEE-E
T ss_pred             CCCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHh---CCCCEEEEEccc
Confidence            456789999999999999999999999999999987643   345566666554

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00198 anthocyanidin reductase; Provisional

Probab=89.43  E-value=0.62  Score=41.47  Aligned_cols=88  Identities=16%  Similarity=0.037  Sum_probs=56.1

Q ss_pred             CcEEEEEcCCCccCC------------------------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccC
Q 023465            7 PGVIINMGSSAGLYP------------------------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQT   62 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~------------------------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T   62 (282)
                      .+++|++||.+....                        .+....|+.||.+.+.+.+.++.  .+|+++..+.|+.+--
T Consensus       123 ~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~~R~~~vyG  200 (338)
T PLN00198        123 VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAE--ENNIDLITVIPTLMAG  200 (338)
T ss_pred             ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHH--hcCceEEEEeCCceEC
Confidence            369999999765321                        12345699999999988887643  3478888888887744


Q ss_pred             cchh----hhh---HHHHh------------h----hCCCCCHHHHHHHHHHhhcCC
Q 023465           63 EMGL----KVA---SKFID------------L----MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        63 ~~~~----~~~---~~~~~------------~----~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      +-..    ...   .....            .    ...+...+|++++++.++...
T Consensus       201 p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        201 PSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             CCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence            3210    000   00000            0    024578999999999888764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=89.30  E-value=2.7  Score=37.57  Aligned_cols=86  Identities=13%  Similarity=0.085  Sum_probs=50.8

Q ss_pred             cEEEEEcCCCccC-------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcc----c--Ccchhh
Q 023465            8 GVIINMGSSAGLY-------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV----Q--TEMGLK   67 (282)
Q Consensus         8 g~Iv~isS~~~~~-------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v----~--T~~~~~   67 (282)
                      .++|++||.+..-             +....+.|+.||.+.+.+++.++. .   ++++..+.|+.+    +  ..+...
T Consensus       127 ~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~  203 (355)
T PRK10217        127 FRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPL  203 (355)
T ss_pred             eEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHH
Confidence            4899999854211             223467899999999999998754 4   444544555433    1  111111


Q ss_pred             hhHHHH--h---------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           68 VASKFI--D---------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        68 ~~~~~~--~---------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ......  .         ....+...+|+++++..++...
T Consensus       204 ~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~  243 (355)
T PRK10217        204 MILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTG  243 (355)
T ss_pred             HHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC
Confidence            101000  0         1124678999999998887653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=89.07  E-value=1.3  Score=39.67  Aligned_cols=68  Identities=13%  Similarity=0.064  Sum_probs=43.4

Q ss_pred             hhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh----hhhHHHHh------h-------------hCCCCCHH
Q 023465           27 IYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL----KVASKFID------L-------------MGGFVPME   83 (282)
Q Consensus        27 ~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~----~~~~~~~~------~-------------~~~~~~~~   83 (282)
                      .|+.||.+.+.+.+.++.  .+++++..+.|+.+--+...    ........      .             ...+...+
T Consensus       175 ~Y~~sK~~~E~~~~~~~~--~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~  252 (353)
T PLN02896        175 VYVLSKLLTEEAAFKYAK--ENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIE  252 (353)
T ss_pred             cHHHHHHHHHHHHHHHHH--HcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHH
Confidence            799999999988877643  34789999998665433211    00000000      0             01356899


Q ss_pred             HHHHHHHHhhcCC
Q 023465           84 MVVKGAFELITDE   96 (282)
Q Consensus        84 ~~a~~~~~l~~~~   96 (282)
                      |++++++.++...
T Consensus       253 Dva~a~~~~l~~~  265 (353)
T PLN02896        253 DICDAHIFLMEQT  265 (353)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999998653

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=88.92  E-value=0.77  Score=39.22  Aligned_cols=72  Identities=21%  Similarity=0.194  Sum_probs=43.7

Q ss_pred             CCCCCCeeEEccCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHH
Q 023465          199 NVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQV  276 (282)
Q Consensus       199 ~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~  276 (282)
                      .+++||++++.+  +|.+|.. +...++++++  .+.. +..... ......+.. ...++++||-.|+ |. |..++.+
T Consensus        66 p~~~g~~~~i~p--~~~~~~~-~~~~~i~i~p~~afgt-g~h~tt-~~~l~~l~~-~~~~~~~VLDiGc-Gs-G~l~i~~  137 (250)
T PRK00517         66 PIRIGDRLWIVP--SWEDPPD-PDEINIELDPGMAFGT-GTHPTT-RLCLEALEK-LVLPGKTVLDVGC-GS-GILAIAA  137 (250)
T ss_pred             CEEEcCCEEEEC--CCcCCCC-CCeEEEEECCCCccCC-CCCHHH-HHHHHHHHh-hcCCCCEEEEeCC-cH-HHHHHHH
Confidence            357898888774  7888865 6677788866  2221 111111 112333322 2468999999998 65 7777765


Q ss_pred             HH
Q 023465          277 YF  278 (282)
Q Consensus       277 a~  278 (282)
                      ++
T Consensus       138 ~~  139 (250)
T PRK00517        138 AK  139 (250)
T ss_pred             HH
Confidence            54

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=88.64  E-value=0.57  Score=45.11  Aligned_cols=27  Identities=30%  Similarity=0.436  Sum_probs=23.7

Q ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          253 GPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       253 ~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ..++|++|+|.|+ |++|+.+++.++.+
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~  159 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRM  159 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHC
Confidence            3578999999999 99999999988764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=88.59  E-value=1.2  Score=39.63  Aligned_cols=88  Identities=18%  Similarity=0.179  Sum_probs=51.9

Q ss_pred             EEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhcc-cc---CCCcEEEEEeCCcccCcch---hhhhH
Q 023465            9 VIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTP-YK---RKGIRINVLCPEFVQTEMG---LKVAS   70 (282)
Q Consensus         9 ~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~-~~---~~gI~v~~i~PG~v~T~~~---~~~~~   70 (282)
                      ++|++||....-           +....+.|++||.+.+.+++.++. +.   ..++..|...|+.-.+-+.   .....
T Consensus       126 ~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~  205 (343)
T TIGR01472       126 KFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAA  205 (343)
T ss_pred             eEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHH
Confidence            789998864321           112456899999999999998865 42   2234456666763222111   11110


Q ss_pred             HHH------------hhhCCCCCHHHHHHHHHHhhcCC
Q 023465           71 KFI------------DLMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        71 ~~~------------~~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ...            .....+.-.+|++++++.++...
T Consensus       206 ~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~  243 (343)
T TIGR01472       206 KIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD  243 (343)
T ss_pred             HHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC
Confidence            100            01224578999999999888653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=88.15  E-value=3.1  Score=36.20  Aligned_cols=105  Identities=16%  Similarity=0.087  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCCccCC---C--------------CCChhhHhhHHHHHHHHHHhcc--cc-CCCcEEEEEeCCccc----C
Q 023465            7 PGVIINMGSSAGLYP---M--------------YNDPIYSASKGGVVLFTRSLTP--YK-RKGIRINVLCPEFVQ----T   62 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~---~--------------~~~~~Y~asKaal~~~t~~la~--~~-~~gI~v~~i~PG~v~----T   62 (282)
                      -.++|++||.+....   .              .....|+.||+..+.+......  +. ...++..+|.|..|-    +
T Consensus       108 VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~  187 (280)
T PF01073_consen  108 VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ  187 (280)
T ss_pred             CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc
Confidence            358999999887543   0              1334799999999998877643  22 235888899998762    2


Q ss_pred             cchhhhhHHHHh-----------hhCCCCCHHHHHHHHHHhhc----C---CCCceEEEEEecCCcc
Q 023465           63 EMGLKVASKFID-----------LMGGFVPMEMVVKGAFELIT----D---ESKAGSCLWITNRRGM  111 (282)
Q Consensus        63 ~~~~~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~----~---~~~~~~~~~~~~~g~~  111 (282)
                      .+..........           .+..+...+++|++.+....    +   ....++..++.++...
T Consensus       188 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  188 RLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             cccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            222111111111           11234568999998876543    2   2235666666655444

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=87.96  E-value=0.89  Score=41.88  Aligned_cols=38  Identities=16%  Similarity=0.105  Sum_probs=30.2

Q ss_pred             HHHHHHHH-HHhCC-CCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          242 GLTASIAL-EQAGP-ASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       242 ~~ta~~~l-~~~~~-~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .-+.+.++ +..++ .+|++|+|.|+ |.+|+.+++.++.+
T Consensus       185 g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~  224 (413)
T cd00401         185 RESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQ  224 (413)
T ss_pred             chhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHC
Confidence            34456677 44455 78999999999 99999999999975

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=87.62  E-value=7.6  Score=34.38  Aligned_cols=88  Identities=11%  Similarity=0.032  Sum_probs=52.4

Q ss_pred             eEEEEEeCCCCCCCCCCCeeEEccC----------------------------CccccEEeecCCCeeeCCCChHHHHHh
Q 023465          187 VGLIAAVGDSVNNVKVGTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPDPEVVAM  238 (282)
Q Consensus       187 ~G~V~~vG~~v~~~~~Gd~V~~~~~----------------------------G~~ae~~~v~~~~~~~~p~~~~~~a~l  238 (282)
                      -++|+|  |.+.++.+|+||+++..                            -.|-+|..+..+..+. | +.++.-+|
T Consensus        38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-~-~~e~~~~L  113 (314)
T PF11017_consen   38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-P-EREDWQML  113 (314)
T ss_pred             EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-c-chhHHHHH
Confidence            367777  78899999999998732                            2344444444433221 1 23444455


Q ss_pred             hhHHHHHHHHH-HHhC---CCCCCEEEEeCCCchHHHHHHHHHH
Q 023465          239 LTSGLTASIAL-EQAG---PASGKKVLVTAAAGGTGQFAVQVYF  278 (282)
Q Consensus       239 ~~~~~ta~~~l-~~~~---~~~g~~vli~ga~g~vG~~a~q~a~  278 (282)
                      .-++...-..| +...   .-..+.|+|..||+=.+......++
T Consensus       114 lrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~  157 (314)
T PF11017_consen  114 LRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLK  157 (314)
T ss_pred             HHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhh
Confidence            55555444455 2221   2345789999998877776666554

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=87.57  E-value=0.77  Score=39.17  Aligned_cols=59  Identities=22%  Similarity=0.160  Sum_probs=50.7

Q ss_pred             EEEEEcCCCccCC---------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh
Q 023465            9 VIINMGSSAGLYP---------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK   67 (282)
Q Consensus         9 ~Iv~isS~~~~~~---------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~   67 (282)
                      .+|-+||..+..-         ..+...|..||-+++-+.-++-+ +.+.|+.-++++||..-|.+...
T Consensus       169 ~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~  237 (341)
T KOG1478|consen  169 QLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSE  237 (341)
T ss_pred             eEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhh
Confidence            7999999887532         35667899999999999999987 99999999999999998887654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=87.55  E-value=1.1  Score=39.36  Aligned_cols=69  Identities=16%  Similarity=0.125  Sum_probs=46.1

Q ss_pred             hhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh---h-hHHHHh----------hhCCCCCHHHHHHHHHH
Q 023465           26 PIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK---V-ASKFID----------LMGGFVPMEMVVKGAFE   91 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~---~-~~~~~~----------~~~~~~~~~~~a~~~~~   91 (282)
                      ..|+.||...+.+.+.+.  ...+++++.+.|+.+-.+....   . ......          ....+...+|++++++.
T Consensus       160 ~~Y~~sK~~~E~~~~~~~--~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFA--KENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             chHHHHHHHHHHHHHHHH--HHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHH
Confidence            479999988888776543  3458999999999987664211   0 000000          11235788999999999


Q ss_pred             hhcCC
Q 023465           92 LITDE   96 (282)
Q Consensus        92 l~~~~   96 (282)
                      ++...
T Consensus       238 ~~~~~  242 (322)
T PLN02662        238 AFEIP  242 (322)
T ss_pred             HhcCc
Confidence            88754

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=86.10  E-value=0.35  Score=42.84  Aligned_cols=55  Identities=29%  Similarity=0.282  Sum_probs=38.3

Q ss_pred             CeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCC----CCCCEEEEeCCCchHHHHHHHHHHH
Q 023465          224 HILPVAR-PDPEVVAMLTSGLTASIALEQAGP----ASGKKVLVTAAAGGTGQFAVQVYFQ  279 (282)
Q Consensus       224 ~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~----~~g~~vli~ga~g~vG~~a~q~a~~  279 (282)
                      .++++|+ -..+.+....+..+++++++.+..    .++++|+|.|+ |.+|..+++.++.
T Consensus       140 ~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~  199 (311)
T cd05213         140 KAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAA  199 (311)
T ss_pred             HHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHH
Confidence            3455666 223334444567777777755443    47999999998 9999999988775

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02686 cinnamoyl-CoA reductase

Probab=84.97  E-value=1.4  Score=39.98  Aligned_cols=68  Identities=12%  Similarity=0.168  Sum_probs=46.5

Q ss_pred             hhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh-h---hHHHH----h----hhCCCCCHHHHHHHHHHhh
Q 023465           26 PIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK-V---ASKFI----D----LMGGFVPMEMVVKGAFELI   93 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~-~---~~~~~----~----~~~~~~~~~~~a~~~~~l~   93 (282)
                      ..|+.||.+.+.+++.++.  .+|++++.|.|+.+-.+.... .   .....    .    ....+...+|++++++.++
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~--~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al  291 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAAR--GKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHVCVY  291 (367)
T ss_pred             chHHHHHHHHHHHHHHHHH--hcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHH
Confidence            4699999999999876643  358999999999997763211 0   00000    0    1113568999999999888


Q ss_pred             cC
Q 023465           94 TD   95 (282)
Q Consensus        94 ~~   95 (282)
                      ..
T Consensus       292 ~~  293 (367)
T PLN02686        292 EA  293 (367)
T ss_pred             hc
Confidence            64

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=84.73  E-value=2.1  Score=39.58  Aligned_cols=39  Identities=23%  Similarity=0.255  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHh-CC-CCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          242 GLTASIALEQA-GP-ASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       242 ~~ta~~~l~~~-~~-~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      .-.+|+++.++ ++ ..|++|+|.|. |.+|..+++.++.+.
T Consensus       195 ~~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~G  235 (425)
T PRK05476        195 GESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLG  235 (425)
T ss_pred             HhhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCC
Confidence            34467777665 55 48999999998 999999999998763

>PLN02214 cinnamoyl-CoA reductase

Probab=83.94  E-value=2.1  Score=38.34  Aligned_cols=87  Identities=15%  Similarity=0.087  Sum_probs=54.9

Q ss_pred             cEEEEEcCCCccCCC----C-----------------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh
Q 023465            8 GVIINMGSSAGLYPM----Y-----------------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~~----~-----------------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~   66 (282)
                      ++||++||..+..+.    +                 ....|+.||.+.+.+.+.++.  .+|+++..+.|+.+-=+...
T Consensus       120 ~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~--~~g~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        120 KRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAK--EKGVDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             CEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHH--HcCCcEEEEeCCceECCCCC
Confidence            589999997543311    0                 134799999999988876543  34789999999877322110


Q ss_pred             ----hhhHHHHh-----------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           67 ----KVASKFID-----------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        67 ----~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                          .....+..           ....+...+|++++++.++...
T Consensus       198 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        198 PTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             CCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCc
Confidence                00000000           0123567999999999988754

>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []

Probab=83.62  E-value=1.6  Score=31.21  Aligned_cols=27  Identities=33%  Similarity=0.500  Sum_probs=19.6

Q ss_pred             ceEEEEEeCC--------CC-CCCCCCCeeEEccCC
Q 023465          186 AVGLIAAVGD--------SV-NNVKVGTPAAIMTFG  212 (282)
Q Consensus       186 ~~G~V~~vG~--------~v-~~~~~Gd~V~~~~~G  212 (282)
                      ..|+|+++|+        .+ ..+++||+|....++
T Consensus        35 ~~G~VvaVG~G~~~~~g~~~~~~vk~GD~Vl~~~~~   70 (93)
T PF00166_consen   35 NQGKVVAVGPGRYNENGEEVPMDVKVGDKVLFPKYA   70 (93)
T ss_dssp             EEEEEEEE-SEEETTTSSEEETSS-TTSEEEEETTT
T ss_pred             ceeEEEEcCCccccCCCcEeeeeeeeccEEeccccC
Confidence            5799999999        32 369999999987654

These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=83.16  E-value=2.7  Score=36.88  Aligned_cols=56  Identities=13%  Similarity=-0.010  Sum_probs=48.8

Q ss_pred             cEE-EEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc
Q 023465            8 GVI-INMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE   63 (282)
Q Consensus         8 g~I-v~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~   63 (282)
                      .+| ++.-|+.+....|+.+.-.....++.+|.++|+. +.+.+|.|..+.-|.++-.
T Consensus       147 ~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  147 SKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             ceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            445 4555787888999999999999999999999998 9999999999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG0234 GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

Probab=82.97  E-value=2  Score=30.77  Aligned_cols=27  Identities=30%  Similarity=0.444  Sum_probs=20.8

Q ss_pred             eEEEEEeCCCCC---------CCCCCCeeEEccCCc
Q 023465          187 VGLIAAVGDSVN---------NVKVGTPAAIMTFGS  213 (282)
Q Consensus       187 ~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~  213 (282)
                      -|+|++||++-.         .+++||+|+..-+++
T Consensus        37 ~g~VvAVG~G~~~~~g~~~~~~VkvGD~Vlf~ky~G   72 (96)
T COG0234          37 EGEVVAVGPGRRDENGELVPLDVKVGDRVLFGKYAG   72 (96)
T ss_pred             ceEEEEEccceecCCCCEeccccccCCEEEECccCC
Confidence            499999997421         399999999876554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=82.92  E-value=2.4  Score=37.15  Aligned_cols=88  Identities=15%  Similarity=0.100  Sum_probs=54.4

Q ss_pred             CcEEEEEcCCCccCCCC---------------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh-----
Q 023465            7 PGVIINMGSSAGLYPMY---------------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL-----   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~---------------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~-----   66 (282)
                      .+++|++||.......+               ....|+.+|.+.+.+.+.+..  ..++++..+.|+.+--+-..     
T Consensus       105 ~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~ilR~~~~~G~~~~~~~~~  182 (328)
T TIGR03466       105 VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAA--EKGLPVVIVNPSTPIGPRDIKPTPT  182 (328)
T ss_pred             CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHH--hcCCCEEEEeCCccCCCCCCCCCcH
Confidence            36899999976543211               134799999999999887643  24788899998766322110     


Q ss_pred             -hhhHHHHh--------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           67 -KVASKFID--------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        67 -~~~~~~~~--------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                       ........        ....+...+|++++++.++...
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  221 (328)
T TIGR03466       183 GRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG  221 (328)
T ss_pred             HHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence             00000000        0112456999999998888653

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1641 consensus Mitochondrial chaperonin [Posttranslational modification, protein turnover, chaperones]

Probab=82.56  E-value=4.9  Score=29.00  Aligned_cols=59  Identities=22%  Similarity=0.263  Sum_probs=37.3

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC---------CCCCCCeeEEccCCcc
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN---------NVKVGTPAAIMTFGSY  214 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~~  214 (282)
                      |.-+-|||+... .....-+.+..-         -.-+-...|+|+++|++..         .+++||||...-+|++
T Consensus        13 Pl~DRVLVqr~~a~~KT~gGilLPE---------ks~~K~~~g~VvavGpG~~~~~G~~v~~~Vk~Gd~VLlpeygGt   81 (104)
T KOG1641|consen   13 PLLDRVLVQRIEAPTKTAGGILLPE---------KSVGKLLQGTVVAVGPGSRDKGGEIVPVSVKVGDRVLLPEYGGT   81 (104)
T ss_pred             cccceeeeeeeeccccccceeEecc---------ccccccceEEEEEEcCccccCCCCCcCccccCCCEEEeeccCCc
Confidence            566888887765 332222222110         1134556799999997642         4899999998877765

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=82.36  E-value=2.2  Score=37.04  Aligned_cols=87  Identities=10%  Similarity=0.054  Sum_probs=52.7

Q ss_pred             cEEEEEcCCCccC------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch------hhhh
Q 023465            8 GVIINMGSSAGLY------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG------LKVA   69 (282)
Q Consensus         8 g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~------~~~~   69 (282)
                      .++|++||.....            +......|+.+|++.+.+++.++.  ..++++..+.|+.+--+..      ....
T Consensus       118 ~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~i~R~~~i~G~~~~~~~~~~~~~  195 (317)
T TIGR01181       118 FRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHR--TYGLPALITRCSNNYGPYQFPEKLIPLMI  195 (317)
T ss_pred             ceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHH--HhCCCeEEEEeccccCCCCCcccHHHHHH
Confidence            4899999854321            112345799999999999988654  2367888888886532211      1111


Q ss_pred             HHHHh--h---------hCCCCCHHHHHHHHHHhhcCC
Q 023465           70 SKFID--L---------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        70 ~~~~~--~---------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      .....  .         ...+...+|+++++.+++.+.
T Consensus       196 ~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~  233 (317)
T TIGR01181       196 TNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG  233 (317)
T ss_pred             HHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC
Confidence            11110  0         112456899999998888643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=81.22  E-value=6.6  Score=34.92  Aligned_cols=97  Identities=18%  Similarity=0.064  Sum_probs=58.3

Q ss_pred             cEEEEEcCCCccCCC-CC-----------C----------hhhHhhHHHHHHHHHHhcc--ccCCCcEEEEEeCCcccCc
Q 023465            8 GVIINMGSSAGLYPM-YN-----------D----------PIYSASKGGVVLFTRSLTP--YKRKGIRINVLCPEFVQTE   63 (282)
Q Consensus         8 g~Iv~isS~~~~~~~-~~-----------~----------~~Y~asKaal~~~t~~la~--~~~~gI~v~~i~PG~v~T~   63 (282)
                      -|+|++||.++.... +.           +          ..|+.||.-    ++--|-  ..+.++....|+|+.|-=|
T Consensus       122 krvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~l----AEkaAw~fa~e~~~~lv~inP~lV~GP  197 (327)
T KOG1502|consen  122 KRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTL----AEKAAWEFAKENGLDLVTINPGLVFGP  197 (327)
T ss_pred             ceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHH----HHHHHHHHHHhCCccEEEecCCceECC
Confidence            589999999987543 11           1          146666632    222222  2356899999999988555


Q ss_pred             chhhhh-------HHHHh--------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           64 MGLKVA-------SKFID--------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        64 ~~~~~~-------~~~~~--------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ......       -++..        ....+.+.+|+|++-+++.+.....  |.++.....
T Consensus       198 ~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~--GRyic~~~~  257 (327)
T KOG1502|consen  198 GLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAK--GRYICVGEV  257 (327)
T ss_pred             CcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccC--ceEEEecCc
Confidence            432210       01110        1122578999999999999877654  666655544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=80.97  E-value=6.3  Score=35.12  Aligned_cols=68  Identities=16%  Similarity=0.160  Sum_probs=38.9

Q ss_pred             ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc------CcchhhhhHHHHh-----------hhCCCCCHHHHH
Q 023465           25 DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ------TEMGLKVASKFID-----------LMGGFVPMEMVV   86 (282)
Q Consensus        25 ~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~------T~~~~~~~~~~~~-----------~~~~~~~~~~~a   86 (282)
                      ...|+.||.+.+.+.+.++. +.   +.+..+.|+.+-      ..+..........           ....+...+|++
T Consensus       164 ~~~Y~~sK~~~E~~~~~~~~~~g---~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a  240 (352)
T PRK10084        164 SSPYSASKASSDHLVRAWLRTYG---LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA  240 (352)
T ss_pred             CChhHHHHHHHHHHHHHHHHHhC---CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHH
Confidence            46899999999999998865 43   333333333221      1111111011100           112357899999


Q ss_pred             HHHHHhhcC
Q 023465           87 KGAFELITD   95 (282)
Q Consensus        87 ~~~~~l~~~   95 (282)
                      +++..++..
T Consensus       241 ~a~~~~l~~  249 (352)
T PRK10084        241 RALYKVVTE  249 (352)
T ss_pred             HHHHHHHhc
Confidence            999888764

>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61

Probab=80.53  E-value=3.3  Score=28.02  Aligned_cols=36  Identities=22%  Similarity=0.181  Sum_probs=27.6

Q ss_pred             HHHHHHHhCCCCCCEEEEeCCC-chHHHHHHHHHHHh
Q 023465          245 ASIALEQAGPASGKKVLVTAAA-GGTGQFAVQVYFQI  280 (282)
Q Consensus       245 a~~~l~~~~~~~g~~vli~ga~-g~vG~~a~q~a~~~  280 (282)
                      .+.+|.....+-++.+||+|++ .|...+|.++|+..
T Consensus        20 i~~~Ld~~~~~~~~~~lvhGga~~GaD~iA~~wA~~~   56 (71)
T PF10686_consen   20 IWAALDKVHARHPDMVLVHGGAPKGADRIAARWARER   56 (71)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCCHHHHHHHHHHHC
Confidence            3455544444558899999998 89999999999864

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=80.35  E-value=1.9  Score=39.98  Aligned_cols=91  Identities=26%  Similarity=0.280  Sum_probs=58.1

Q ss_pred             ccCCceEEEEEeCCCCCCCCCCCeeEEc-c-----------------CCccccEEeecCCCeeeCCCChHHHHHhhhHHH
Q 023465          182 AGFEAVGLIAAVGDSVNNVKVGTPAAIM-T-----------------FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGL  243 (282)
Q Consensus       182 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-~-----------------~G~~ae~~~v~~~~~~~~p~~~~~~a~l~~~~~  243 (282)
                      -|||+++.+.+|+++++..-+|+.-+.- .                 .+.|++.+.++.. +      ..+.+....+..
T Consensus        92 ~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~-v------~~~t~i~~~~~S  164 (423)
T PRK00045         92 EGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKR-V------RTETGIGAGAVS  164 (423)
T ss_pred             CCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhh-H------hhhcCCCCCCcC
Confidence            5899999999999988876666543311 0                 1444444444421 1      112222233566


Q ss_pred             HHHHHHHHhC----CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          244 TASIALEQAG----PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       244 ta~~~l~~~~----~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++++++.+.    ..++++|+|.|+ |.+|..+++.++..
T Consensus       165 v~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~  204 (423)
T PRK00045        165 VASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEK  204 (423)
T ss_pred             HHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHC
Confidence            6777775443    267899999998 99999999887653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=80.13  E-value=2  Score=37.44  Aligned_cols=25  Identities=32%  Similarity=0.538  Sum_probs=20.0

Q ss_pred             CCCCEEEEeCCCchHHHH-HHHHHHH
Q 023465          255 ASGKKVLVTAAAGGTGQF-AVQVYFQ  279 (282)
Q Consensus       255 ~~g~~vli~ga~g~vG~~-a~q~a~~  279 (282)
                      -.|+.|||+|+++|+|.. +.++||.
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~r   61 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKR   61 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHh
Confidence            579999999999999965 4466653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	282
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-20
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-20
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-20
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-08
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-08
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		9e-08
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-07
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		2e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-06
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		8e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-05
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-05
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-05
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-05
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-05
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		4e-05
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		4e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		5e-05
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-05
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		8e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-05
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		9e-05
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		9e-05
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-04
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-04
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-04
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-04
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-04
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-04
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-04
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-04
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-04
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-04
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-04
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		4e-04
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		5e-04
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		5e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		6e-04
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		6e-04
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		6e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-04
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		8e-04
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		9e-04

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 7/120 (5%)
Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+
Sbjct: 69  DINYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY 123
Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+Q+
Sbjct: 124 TVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 183

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 7/120 (5%)
Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+
Sbjct: 48  DINYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY 102
Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+Q+
Sbjct: 103 TVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 162

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 7/120 (5%)
Query: 159 QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF 217
            +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+
Sbjct: 77  DINYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY 131
Query: 218 TMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQV 276
           T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+Q+
Sbjct: 132 TVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 191

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS---LTPYKRKGIRINVLCPE 58
           Q   + G+IINM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP 
Sbjct: 127 QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 186
Query: 59  FVQT----------EMG--LKVASKFIDLMG--GFVPMEMVVKGAFELITDESKAGSCLW 104
           FV T           MG  ++      D++   G +   ++  G   LI D++  G+ + 
Sbjct: 187 FVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 246
Query: 105 ITNRRGMEYWPTSEEKAKYL 124
           IT  +G+ +     ++  Y 
Sbjct: 247 ITTSKGIHFQDYGSKENLYF 266

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 154 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   F D+       E+  + AF+ IT
Sbjct: 214 MAASVREHFSDI------WEVSTEEAFDRIT 238

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 154 RGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 214 MAASVREHYSDI------WEVSTEEAFDRIT 238

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 150 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 210 MAASVREHYSDI------WEVSTEEAFDRIT 234

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 150 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 210 MAASVREHYSDI------WEVSTEEAFDRIT 234

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 134 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 193
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 194 MAASVREHYSDI------WEVSTEEAFDRIT 218

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 154 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 214 MAASVREHYSDI------WEVSTEEAFDRIT 238

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T 
Sbjct: 154 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 214 MAASVREHYSDI------WEVSTEEAFDRIT 238

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP +V+T 
Sbjct: 154 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETP 213
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGAFELIT 94
           M   V   + D+       E+  + AF+ IT
Sbjct: 214 MAASVREHYSDI------WEVSTEEAFDRIT 238

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 4   AKKPGVIINMGSSAGLYPMYNDP----IYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           A+  G I+N+GS +G   + N P     Y ASKG V   TR+L   +  +G+R+N L P 
Sbjct: 133 ARGAGAIVNLGSMSG--TIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPG 190
Query: 59  FVQTEMGLKVASK 71
           +V TEM LK+  +
Sbjct: 191 YVATEMTLKMRER 203

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARPDP-- 233
           LP   G E  G++ AVGD V   KVG   A  T   G+Y+E  ++P  +++ +A      
Sbjct: 57  LPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFE 116
Query: 234 EVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQ 275
           +  A++  GLT    L Q      G+ +L  AAAGG G  A Q
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQ 159

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A++ G I+N+ S    +   + P YSASKG +V  TRSL   Y  + IR+N + P ++ T
Sbjct: 123 AQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDT 182
Query: 63  EMG 65
            +G
Sbjct: 183 PLG 185

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPA-AIMTFGSYAEFTMVPSKHILPVARPDP-- 233
           + P   GFE  G++ A+GDSV   ++G    A + + ++AE    P + +  +  PD   
Sbjct: 59  KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI--PDDMS 116
Query: 234 --EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
             E  A   + +TA + L E A    G  VLV +A GG GQ   Q+
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQL 162

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G IIN+ S  G         Y+ASK GV+  T++      R GIR N + P F+ T M  
Sbjct: 145 GSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 204
Query: 67  KVASKFIDLMGGFVPM 82
           KV  K +D +   +PM
Sbjct: 205 KVPQKVVDKITEMIPM 220

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPY-KRKGIRINVLCPEFVQTE 63
           K+ G IIN+ S  GL        Y+A+K GV+ F+++       + I +NV+CP F+ ++
Sbjct: 128 KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD 187
Query: 64  MGLKVASKFIDLMGGFVPM 82
           M  K+       + G +P+
Sbjct: 188 MTAKLGEDMEKKILGTIPL 206

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 174 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA-AIMTF----GSYAEFTMVPSKHILPV 228
           + + LP   G++  G +  +G  VNNV +G     I  F      YAE+       I+  
Sbjct: 63  LKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQK 122
Query: 229 ARPDP--EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQ 279
                  +  ++ T+GLTA  AL QA    G  VL+ A AGG G  A+Q+  Q
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ 175

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         Y+A+K GV+ FT+S+      +G+ +N + P F++T+
Sbjct: 135 KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 194
Query: 64  M 64
           M
Sbjct: 195 M 195

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         Y+A+K GV+ FT+S+      +G+ +N + P F++T+
Sbjct: 135 KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 194
Query: 64  M 64
           M
Sbjct: 195 M 195

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         Y+A+K GV+ FT+S+      +G+ +N + P F++T+
Sbjct: 135 KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 194
Query: 64  M 64
           M
Sbjct: 195 M 195

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEM 64
           GVI+N+ S A L        Y+ SKG V+  T+S+   Y   GIR N +CP  ++T M
Sbjct: 135 GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 157 YGQVNFSSGRYFSDGN-----DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF 211
           +  V+   GR+   GN     D+G +LP   G E  G I  VGD V     G   A+  +
Sbjct: 39  HSDVHMRQGRF---GNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPW 95
Query: 212 ----------------------------GSYAEFTMVPS-KHILPVARPDPEVVAMLT-S 241
                                       G+YAE+ +VP  K++  + R      A LT S
Sbjct: 96  EGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCS 155
Query: 242 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQG 282
           G+T   A+ +A     K ++V  A GG G  A+Q+   + G
Sbjct: 156 GVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSG 196

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8   GVIINMGSSAGLYP-MYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMG 65
           G I+N+ S+ G    MY  P Y+ASK GVV FT+S+     + GI +N +CP +V+T M 
Sbjct: 155 GRIVNIASTGGKQGVMYAAP-YTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA 213
Query: 66  LKVASKF 72
            +V   +
Sbjct: 214 ERVREGY 220

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         ++A+K GV+ FT+S+      +G+ +N + P F++T+
Sbjct: 135 KRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 194
Query: 64  M 64
           M
Sbjct: 195 M 195

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A+  G II+  S   + P++ +PIY+ +K  +++F+++L T   +  IR+N + P  + T
Sbjct: 133 ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192
Query: 63  EMGLKVASKFIDLMGG 78
              +K A +     GG
Sbjct: 193 PDWIKTAKELTKDNGG 208

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 7   PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR----SLTPYKRKGIRINVLCPEFVQT 62
           PG I+N+ S      + N  +Y ++KG + + T+     L P+K   IR+N + P  V T
Sbjct: 128 PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK---IRVNAVNPTVVMT 184
Query: 63  EMGLKV------ASKFIDL--MGGFVPMEMVVKGAFELITDES 97
            MG         A   ++   +G F  +E VV     L++D S
Sbjct: 185 SMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A+  G II+  S   + P++ +PIY+ +K  +++F+++L T   +  IR+N + P  + T
Sbjct: 133 ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192
Query: 63  EMGLKVASKFIDLMGG 78
              +K A +     GG
Sbjct: 193 PDWIKTAKELTKDNGG 208

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM 64
           G I+N+ S  G+        Y ASK G++ FTR++   Y ++GI +N + P F++TEM
Sbjct: 132 GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 7   PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR----SLTPYKRKGIRINVLCPEFVQT 62
           PG I+N+ S      + N  +Y ++KG + + T+     L P+K   IR+N + P  V T
Sbjct: 128 PGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK---IRVNAVNPTVVMT 184
Query: 63  EMGLKV------ASKFIDL--MGGFVPMEMVVKGAFELITDES 97
            MG         A   ++   +G F  +E VV     L++D S
Sbjct: 185 SMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEFVQTE 63
           G I+N+ S  GL+    +  Y+ASKGG+V  TRS    L P +   IR+N + P  + TE
Sbjct: 129 GAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR---IRVNAVAPGAIATE 185
Query: 64  MGLK 67
             L+
Sbjct: 186 AVLE 189

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G II +GS  G         Y+A+K G++ F++SL      +GI +NV+ P F++T+
Sbjct: 128 KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 187
Query: 64  M 64
           M
Sbjct: 188 M 188

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           ++ G IIN+ S  G+        Y ASK G++ F++SL      + + +N + P F+++ 
Sbjct: 133 RRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESA 192
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGA 89
           M  K+  K  D + G +PM+ +  GA
Sbjct: 193 MTGKLNEKQKDAIMGNIPMKRMGVGA 218

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           ++ G IIN+ S  G+        Y ASK G++ F++SL      + + +N + P F+++ 
Sbjct: 130 RRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESA 189
Query: 64  MGLKVASKFIDLMGGFVPMEMVVKGA 89
           M  K+  K  D + G +PM+ +  GA
Sbjct: 190 MTGKLNEKQKDAIMGNIPMKRMGVGA 215

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 179 PFDAGFEAVGLIAAVGDSVNNVKVG--TPAAIMTFGSYAEFTMVPSKHILPVARP----D 232
           P   GFEA  ++  VG  V +  VG      +   G+Y++  + P++ ++ V +     D
Sbjct: 61  PIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDD 120
Query: 233 PEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAV 274
             +  ++  G+TA   L Q      G  VL+ AAAGG G   V
Sbjct: 121 VHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMV 163

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVV-LFTRSLTPYKRKGIRINVLCPEFVQT 62
           A K G IIN+ S AG  P+ +   Y+ASK G+  L T +    ++  +R++++ P  V+T
Sbjct: 155 AAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT 214
Query: 63  EMGLKVASK 71
           E G+ +++K
Sbjct: 215 EFGVGLSAK 223

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR-SLTPYKRKGIRINVLCPEFVQTEM 64
           G+++N  S  G+  + N   Y+A+K GVV  TR S   Y R GIRIN + P  + T M
Sbjct: 145 GMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         Y+A+K GV+ FT+S+      +G+ +N + P  ++T+
Sbjct: 135 KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETD 194
Query: 64  M 64
           M
Sbjct: 195 M 195

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 10  IINMGS-SAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGLK 67
           IIN+GS +     M N   Y+ASKGGV   T++L   + R GIR+NV+ P + +T+M   
Sbjct: 153 IINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA 212
Query: 68  VAS--KFIDLMGGFVPM 82
           V S  + +D M   +P+
Sbjct: 213 VFSDPEKLDYMLKRIPL 229

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
           +K G IIN+ S AG+        Y+ASK G++ FT+S+   +  KGI  N + P  ++T+
Sbjct: 132 QKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD 191
Query: 64  M 64
           M
Sbjct: 192 M 192

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G IIN+GS  G         Y+A+K GV+ FT+S       +G+ +N + P F++T+
Sbjct: 132 KRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETD 191

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K+ G II +GS  G         ++A+K G++ F++SL      +GI +NV+ P F++T+
Sbjct: 128 KRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 187
Query: 64  M 64
           M
Sbjct: 188 M 188

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR-SLTPYKRKGIRINVLCPEFVQT 62
           G IIN+ S+ GL    N   Y A+K GVV FT+ +      +GI  N +CP +V+T
Sbjct: 135 GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT 190

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4   AKKPGVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
           A+K G IINM S A  +  + N  +YS +K  V+  T+S+   + ++GIR N +CP  V 
Sbjct: 122 AQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVD 181
Query: 62  T 62
           T
Sbjct: 182 T 182

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 7   PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEFVQT 62
           PG I+N+ S        N   YS++KG + + T++    L P+K   IR+N + P  V T
Sbjct: 128 PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK---IRVNSVNPTVVLT 184
Query: 63  EMGLKVAS--------KFIDLMGGFVPMEMVVKGAFELITDESKAGS 101
           +MG KV++        K    +  F  +E VV     L++D S + S
Sbjct: 185 DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 231

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 33/131 (25%)
Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------------------------- 209
           +LP   G E  G++  +G++V   K+G  A I                            
Sbjct: 59  KLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG 118
Query: 210 -----TFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA 264
                +F  YA    V + HI P      +V  +L +G+T   AL+ A   +G  V ++ 
Sbjct: 119 YTHDGSFQQYATADAVQAAHI-PQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISG 177
Query: 265 AAGGTGQFAVQ 275
           AAGG G  AVQ
Sbjct: 178 AAGGLGSLAVQ 188

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           ++ G ++  GS AGL   +    Y+A K GVV   R+L     RKG+R+NVL P  +QT 
Sbjct: 127 EEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTP 185
Query: 64  MGLKVASKFIDLMGGFVPM------EMVVKGAFELITDESK--AGSCLWITNRRGM 111
           M   +     +   G  P+      E V + A  L+++ES    G  L++   R +
Sbjct: 186 MTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI 241

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 145 QLPESFEKLLWIYGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV-------GDSV 197
            LPE    +   Y  VN+  G        I    PF  G +  G++ +        GD V
Sbjct: 27  DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTXPFVPGIDLAGVVVSSQHPRFREGDEV 86
Query: 198 NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIA---LEQA 252
             +  G    +  FG Y+E+  +  + ++P+ +     E  A+ T+G TA+++   LE+ 
Sbjct: 87  --IATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALSIHRLEEH 144
Query: 253 G--PASGKKVLVTAAAGGTGQFAV 274
           G  P  G  VLVT A GG G  AV
Sbjct: 145 GLTPERGP-VLVTGATGGVGSLAV 167

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTE 63
           K PG I+   S   L  +     Y+AS  GVV  TR+L     R GIR+N L P F++T 
Sbjct: 126 KNPGSIVLTASRVYLGNL-GQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETR 184
Query: 64  MGLKVASKFID-------LMGGFVPMEMVVKGAFELITDESK--AGSCLWITNRRGMEYW 114
              KV  K  +       L     P+E+     F L++DES    G  L++   R +   
Sbjct: 185 XTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF-LLSDESSFITGQVLFVDGGRTIGAA 243
Query: 115 P 115
           P
Sbjct: 244 P 244

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR-SLTPYKRKGIRINVLCPEFVQT 62
           G IIN+ S+ GL    N   Y A+K GVV  T+ +      KGI  N +CP +V+T
Sbjct: 135 GRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRT 190

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 5   KKPGVIINMGSSAGLYPMYNDP----IYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +K GVI+ +GS +GL  + N P     Y+ASK GV  + RSL   +   GIR N + P +
Sbjct: 140 QKQGVIVAIGSMSGL--IVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTY 197
Query: 60  VQTEM 64
           ++T +
Sbjct: 198 IETTL 202

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 26  PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE--MGLKVASKFIDLMGGFVPM 82
           P Y+ +K  ++  TR+L   + R GIR+N+LCP +V+TE  + L+   +  + +   +PM
Sbjct: 142 PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM 201
Query: 83  ------EMVVKGAFELITDESK 98
                 E + + A  L  DE++
Sbjct: 202 GRWARPEEIARVAAVLCGDEAE 223

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL 66
           G IIN+ S  GL        YS+SK GV+ FT+SL      + I +N + P F+ ++M  
Sbjct: 173 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232
Query: 67  KVASKF 72
           K++ + 
Sbjct: 233 KISEQI 238

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+AA K G +I++ S+       N   Y A+KGGV+ FTR+L T   +  I  N + P  
Sbjct: 126 MRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGL 185
Query: 60  VQTEMGLKVASKFIDLMGGFVPMEMVVKG 88
           ++++ G+K +    +   GFV M   +KG
Sbjct: 186 IESD-GVKASPH--NEAFGFVEMLQAMKG 211

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTR-SLTPYKRKGIRINVLCPEFVQT 62
           G IIN+ S+ GL    N   Y A+K GVV FT+ +      +GI  N +CP +V++
Sbjct: 135 GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRS 190

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	5e-28
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	9e-22
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-20
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-20
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-19
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-18
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-18
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-17
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-17
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-17
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-17
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	8e-17
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-16
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-16
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-16
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-16
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-16
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-16
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-16
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-16
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-16
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	6e-16
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-15
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-15
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-15
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-15
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-15
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-15
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-15
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-15
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-15
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-15
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-15
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-15
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-15
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-15
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-15
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-15
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-15
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-15
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	5e-15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	6e-15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	7e-15
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-15
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	9e-15
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-14
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-14
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-14
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-14
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-14
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-14
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-14
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-14
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-14
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	4e-14
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	5e-14
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-14
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-14
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	9e-14
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-13
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-13
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-13
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-13
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-13
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-13
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-13
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-13
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-13
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-13
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-13
3imf_A	257	Short chain dehydrogenase; structural genomics, in	5e-13
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	5e-13
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	5e-13
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-13
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	8e-13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-12
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-12
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-12
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-12
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-12
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-12
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-12
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-12
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-12
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-12
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-11
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-11
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-11
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-11
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-11
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-11
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-11
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-11
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-11
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-11
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-11
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-11
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-11
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-11
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-11
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-11
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-11
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-11
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	4e-11
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-11
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-11
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-11
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	6e-11
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-11
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	8e-11
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-10
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-10
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-10
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-10
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-10
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-10
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-10
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-10
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-10
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-10
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-10
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-10
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-10
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-10
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-10
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-10
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-10
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	5e-10
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-10
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-10
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-10
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	6e-10
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-10
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	7e-10
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-10
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	8e-10
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	8e-10
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	9e-10
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	9e-10
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	9e-10
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-09
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-09
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-09
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-09
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-09
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-09
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-09
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-09
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-09
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-09
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-09
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-09
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-09
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-09
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-09
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	5e-09
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-09
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-09
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-09
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	9e-09
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-08
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-08
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-08
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-08
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-08
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	3e-08
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-08
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-08
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-08
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	8e-08
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	9e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-07
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-07
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-07
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-07
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-07
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-07
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-07
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-07
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	5e-07
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-07
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-07
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	8e-07
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	9e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-07
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	9e-07
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-06
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-06
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-06
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-06
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-06
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-06
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-06
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-06
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-06
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-06
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-05
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-05
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	6e-05
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-04
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-04
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-04
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	4e-04
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-04
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	7e-04
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	9e-04

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  109 bits (275), Expect = 5e-28
 Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 7/121 (5%)

Query: 157 YGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYA 215
              +N+S+GRY     D   + PFD GFE +G + A+G S +    VG   A M  GS+A
Sbjct: 67  ASDINYSAGRY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFA 121

Query: 216 EFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAV 274
           E+T+VP+    PV    PE + +L SG TA I+L++ G  + GKKVLVTAAAGGTGQFA+
Sbjct: 122 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 181

Query: 275 Q 275
           Q
Sbjct: 182 Q 182

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINVLCPE 58
           Q   + G+IINM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP 
Sbjct: 127 QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 186

Query: 59  FVQTEM--------GLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLW 104
           FV T +         +    ++ D +   +         ++  G   LI D++  G+ + 
Sbjct: 187 FVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 246

Query: 105 ITNRRGMEYWPTSEEKAKYL 124
           IT  +G+ +     ++  Y 
Sbjct: 247 ITTSKGIHFQDYGSKENLYF 266

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 91.9 bits (229), Expect = 9e-22
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPV--ARPDP 233
           LP   G E  G++ AVGD V   KVG   A  T   G+Y+E  ++P  +++ +  +    
Sbjct: 57  LPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFE 116

Query: 234 EVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQ 275
           +  A++  GLT    L Q      G+ +L  AAAGG G  A Q
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQ 159

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 90.0 bits (224), Expect = 4e-21
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA--IMTFGSYAEFTMVPSKHILPV--ARPD 232
            LP   G EA G+++ VG  V ++K G          G+Y+    + +     +  A   
Sbjct: 56  SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISF 115

Query: 233 PEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQ 275
            +  A    GLT    L +       ++ L  AAAGG G  A Q
Sbjct: 116 EQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 19/130 (14%)

Query: 160 VNFS-----SGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP--AAIMTFG 212
           VNF      +G             P   GFEA  ++  VG  V +  VG      +   G
Sbjct: 40  VNFLDTYHRAGIPHPLV---VGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLG 96

Query: 213 SYAEFTMVPSKHILPVARPDP------EVVAMLTSGLTASIALEQAGPA-SGKKVLVTAA 265
           +Y++  + P++ ++ V  P         +  ++  G+TA   L Q      G  VL+ AA
Sbjct: 97  AYSQERLYPAEKLIKV--PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAA 154

Query: 266 AGGTGQFAVQ 275
           AGG G   V 
Sbjct: 155 AGGMGHIMVP 164

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 11/107 (10%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMV-PSKHILPVARPD---- 232
            P+  G EA G + A G  V N +VG   A ++  ++A+++ +     ++ +  P     
Sbjct: 63  KPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKL--PKGTSD 120

Query: 233 ---PEVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQ 275
                  A L   LTA     +A     G  VL+ AAAGG G    Q
Sbjct: 121 EELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQ 167

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 14/125 (11%)

Query: 160 VNFS-----SGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGS 213
           +N S     +G Y          LP   G+E VG++  VG  V+   +G     +   G+
Sbjct: 44  INPSDLIPITGAY-----AHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGT 98

Query: 214 YAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTG 270
           + E+    +  ++P+  +  D     M  + LTA +   +         +LV A     G
Sbjct: 99  WQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIG 158

Query: 271 QFAVQ 275
               Q
Sbjct: 159 HLFAQ 163

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 9/105 (8%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFV 60
           +     G+I N+ S  G   ++  P+YSASK  VV FT SL       G+    + P   
Sbjct: 125 RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGIT 184

Query: 61  QTEM------GLKVASKFIDLMGGFVPM--EMVVKGAFELITDES 97
           +T +       L V  +  +L+        E   +   + I    
Sbjct: 185 RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK 229

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 81.5 bits (202), Expect = 4e-18
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 11/111 (9%)

Query: 174 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVG-----TPAAIMTFGSYAEFTMVPSKHILPV 228
           + + LP   G++  G +  +G  VNNV +G               YAE+       I+  
Sbjct: 63  LKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQK 122

Query: 229 ARPD----PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
              +     +  ++ T+GLTA  AL QA    G  VL+ A AGG G  A+Q
Sbjct: 123 --LEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQ 171

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 79.9 bits (198), Expect = 1e-17
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 12/94 (12%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL 55
           +Q A     +   ++  GS+AG        +Y+ASK  +  F R+     K +GIRIN L
Sbjct: 142 VQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTL 201

Query: 56  CPEFVQTEMGLKVA-------SKFIDLMGGFVPM 82
            P   +T   +++A          ++ +   VPM
Sbjct: 202 SPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM 235

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 79.5 bits (197), Expect = 1e-17
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+ A   G I+N+ S+AGL  +     Y ASK GV   ++          IR+N + P  
Sbjct: 125 MKDAGG-GSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGM 183

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
             T M  +   +  +      PM
Sbjct: 184 TYTPMTAETGIRQGEGNYPNTPM 206

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 5/104 (4%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP--AAIMTFGSYAEFTMVPSKHILPV--ARPDP 233
           LP   G E V  + AVG +V  +K G     A    G++    +   + ++ V    P  
Sbjct: 84  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQ 143

Query: 234 EVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQV 276
               +  +  TA   L        G  V+  A+  G GQ  +Q+
Sbjct: 144 SAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQI 187

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 17/128 (13%)

Query: 160 VNFS-----SGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGT----PAAIM 209
           +N S      G+Y              AGFE VG I A GD       VG        + 
Sbjct: 61  INPSDVAFIKGQY-----GQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLS 115

Query: 210 TFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG 267
            +GS+AE+ +  +   +P+     D +  AM+ + LTA    +       K  ++TA A 
Sbjct: 116 NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGAS 175

Query: 268 GTGQFAVQ 275
              +  + 
Sbjct: 176 QLCKLIIG 183

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 78.4 bits (194), Expect = 8e-17
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD---- 232
            P   GFE  G++ A+GDSV   ++G    A + + ++AE    P + +  +  PD    
Sbjct: 60  TPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI--PDDMSF 117

Query: 233 PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
            E  A   + +TA + L E A    G  VLV +A GG GQ   Q+
Sbjct: 118 SEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQL 162

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 78.2 bits (193), Expect = 1e-16
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 157 YGQVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP----AAIMTFG 212
           YG    +  R        G   P   G +  G++   G  V   K G            G
Sbjct: 73  YGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQG 132

Query: 213 SYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALE-----QAGPASGKKVLVTAA 265
           + +EF +V    +   P +    +  ++    LTA  A+           +GK+VL+  A
Sbjct: 133 TLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGA 192

Query: 266 AGGTGQFAVQ 275
           +GG G FA+Q
Sbjct: 193 SGGVGTFAIQ 202

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 76.4 bits (189), Expect = 1e-16
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      GVI+N+ S A L        Y+ SKG V+  T+S+   Y   GIR N +CP  
Sbjct: 129 MLLQGA-GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGM 187

Query: 60  VQTEM--GLKVASKFIDLMGGFVPM 82
           ++T M        +  D +   +P 
Sbjct: 188 IETPMTQWRLDQPELRDQVLARIPQ 212

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           + +A   G I+N+ S+           Y+ +K  +   TR + T Y R G+R N + P  
Sbjct: 133 LISAGG-GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGL 191

Query: 60  VQTEMGLKVAS-KFIDLMGGFVPM 82
           V+T           +D+       
Sbjct: 192 VRTPRLEVGLPQPIVDIFATHHLA 215

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G IIN  S      + +   Y ASKG +   TR++   + ++GIR+N + P  
Sbjct: 147 MRRNGG-GSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGT 205

Query: 60  VQTEM 64
           + +  
Sbjct: 206 IDSPY 210

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 76.0 bits (188), Expect = 2e-16
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M    K GVI+N  S AG+   +    Y+ +K G++  TRS+   Y  +GIR   + P  
Sbjct: 131 MLKQGK-GVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGT 189

Query: 60  VQTEMGLKVAS----KFIDLMGGFVPM 82
           V+T +GL  +         L       
Sbjct: 190 VKTNIGLGSSKPSELGMRTLTKLMSLS 216

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVL 55
           ++      K    I+  GS        N   Y+ SKG +   T+SL     +  IR+N +
Sbjct: 109 IKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTV 168

Query: 56  CPEFVQTEMGLKVASKFIDLMGGFVP 81
           CP  V T++   +  K+ + +G    
Sbjct: 169 CPGTVDTDLYRNLIQKYANNVGISFD 194

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 75.2 bits (186), Expect = 4e-16
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINVLCP 57
           M+       IINM S  G     +   Y+ASKG V + ++S       K   +R+N + P
Sbjct: 128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187

Query: 58  EFVQTEMGLKVAS-KFIDLMGGFVPM 82
            +++T +   +   +         PM
Sbjct: 188 GYIKTPLVDDLPGAEEAMSQRTKTPM 213

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 75.3 bits (186), Expect = 4e-16
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
            +     GVI+N  S  G    ++   Y+A+K GV+  TR         G+RIN + P  
Sbjct: 147 FRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSI 206

Query: 60  VQTEMGLKVAS-KFIDLMGGFVPM 82
            + +   K +S + +D +      
Sbjct: 207 ARHKFLEKTSSSELLDRLASDEAF 230

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           +      G I    S AGL P      Y  +K GVV    +L    K  GI ++VLCP  
Sbjct: 154 LLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMV 213

Query: 60  VQTEM 64
           V+T++
Sbjct: 214 VETKL 218

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 76.5 bits (188), Expect = 4e-16
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPV--ARPDPE 234
                G E  G++   G S     +     A +    Y+++  +P+   L +       +
Sbjct: 90  ASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPAD 149

Query: 235 VVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQV 276
             +   + LTA   +E         ++ TAAA   GQ   Q+
Sbjct: 150 GASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQI 191

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 74.5 bits (184), Expect = 6e-16
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 10/91 (10%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G+++N  S  G+  + N   Y+A+K GVV  TR+    Y R GIRIN + P  
Sbjct: 139 MREQGS-GMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGA 197

Query: 60  VQTEM--------GLKVASKFIDLMGGFVPM 82
           + T M          +   K  +      P 
Sbjct: 198 IWTPMVENSMKQLDPENPRKAAEEFIQVNPS 228

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M A  + G IINM S AG        IY A+K  V+  T+S      +  I +N + P  
Sbjct: 128 MIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGV 187

Query: 60  VQTEMGLKVASKFIDLMG 77
           V  E    V + F     
Sbjct: 188 VDGEHWDGVDALFARYEN 205

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G I+N+ S  GL+    +  Y+ASKGG+V  TRSL        IR+N + P  
Sbjct: 123 MRKVGG-GAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGA 181

Query: 60  VQTEMGLKVAS------KFIDLMGGFVPM 82
           + TE  L+  +      +          +
Sbjct: 182 IATEAVLEAIALSPDPERTRRDWEDLHAL 210

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M AA + G II + S+A L P+ +   Y  SK G+V+ T+ L       GIR N +CP  
Sbjct: 144 MVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTV 203

Query: 60  VQTEM 64
           V TEM
Sbjct: 204 VLTEM 208

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      G I+N+ S AG   +     Y  SK G++  +R      +  GIR N L P F
Sbjct: 149 MIERGG-GAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAF 207

Query: 60  VQTEMGLKVASKFIDLMG 77
           V T M     + F   +G
Sbjct: 208 VDTPMQQTAMAMFDGALG 225

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 72.9 bits (180), Expect = 2e-15
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           + A   PG I+N+ S      + N  +Y ++KG + + T+ +        IR+N + P  
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181

Query: 60  VQTEMGLKVAS 70
           V T MG    S
Sbjct: 182 VMTSMGQATWS 192

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           ++ ++  G +IN+ S  G         Y A+KG V   T++L       G+R+N + P  
Sbjct: 129 LRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGN 186

Query: 60  VQTEMGLKVASKFID 74
           + T +  ++A+   D
Sbjct: 187 IWTPLWEELAALMPD 201

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 72.9 bits (180), Expect = 2e-15
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+ A + G IIN+ S  GL        Y+A+K  V   T+S        GIR+N + P  
Sbjct: 127 MKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGL 185

Query: 60  VQTEM 64
           V+T M
Sbjct: 186 VKTPM 190

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 73.7 bits (182), Expect = 3e-15
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGT--PAAIMTFGSYAEFTMVPSKHILPVARPD--- 232
           LP+  G +  G+I AVGD+ +  K G     +    G YAE+ +     +  +  P+   
Sbjct: 87  LPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKL--PEKLD 144

Query: 233 -PEVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQ 275
             +  A+     TA  AL  +    +G+ VLV  A+GG G  A Q
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ 189

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 72.9 bits (180), Expect = 3e-15
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 1   MQAAK---KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLC 56
            +      +  VI+N+ S+    P  N   Y+A+KG VV  T++L        IR+  L 
Sbjct: 130 FKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN 189

Query: 57  PEFVQTEM 64
           P   +T +
Sbjct: 190 PVAGETPL 197

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPV--ARPDPE 234
            PF  G E  G++ +  +  + +K G    A    G YAE   V   +ILP      D E
Sbjct: 78  PPFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAE 136

Query: 235 VVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQV 276
            VA++ +  T   A  +     +G+ VLV  AAGG G  A+Q+
Sbjct: 137 AVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQI 179

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 73.0 bits (180), Expect = 3e-15
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M AA   G I+N+ S  GL P     +Y  +K  +   T+ +   +  +GIRIN +CP  
Sbjct: 140 MAAAGG-GAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNE 198

Query: 60  VQTEM 64
           V T M
Sbjct: 199 VNTPM 203

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 73.0 bits (180), Expect = 3e-15
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M A  + G II   S  GL    +   Y A+K GVV   R+      +  IR+N + P  
Sbjct: 151 MIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH 210

Query: 60  VQTEM 64
           V+T M
Sbjct: 211 VKTPM 215

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 72.6 bits (179), Expect = 3e-15
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      G I+N  S AG+    N   Y  SKG ++  T +         IR+N + P +
Sbjct: 131 MITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY 189

Query: 60  VQTEM 64
           +    
Sbjct: 190 MGPGF 194

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 1   MQAAKKP-GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           M+A +   G IIN GS +   P      Y+A+K  +   T+S     +   I    +   
Sbjct: 149 MKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIG 208

Query: 59  FVQTEMGLKVASKFIDLMGGFVPME 83
              T M  K+ +         + +E
Sbjct: 209 NADTPMAQKMKAGVPQADLS-IKVE 232

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL 55
           +Q      ++ G I+   S A         +YSASK  +V F   L      +GIR+N +
Sbjct: 121 VQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSV 180

Query: 56  CPEFVQTEMGLKVAS------KFIDLMGGFVPM 82
            P F+ T              +F  L     PM
Sbjct: 181 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPM 213

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 72.6 bits (179), Expect = 4e-15
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 1   MQAAKKPGVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           + A    G +    S  G          Y+ASK G++   ++L      +GIR+N L P 
Sbjct: 132 IAALGG-GSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPG 190

Query: 59  FVQTEMGLKVAS----KFIDLMGGFVPM 82
              T            +    + G   +
Sbjct: 191 GTDTPANFANLPGAAPETRGFVEGLHAL 218

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 72.1 bits (178), Expect = 5e-15
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                  G +INM S     P      Y+ASKGG+ L T +L   Y  KGIR+N + P  
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190

Query: 60  VQTEM 64
           + T +
Sbjct: 191 INTPI 195

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 71.7 bits (177), Expect = 5e-15
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M     PG I+N+ S        N   YS++KG + + T+++        IR+N + P  
Sbjct: 122 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 181

Query: 60  VQTEM 64
           V T+M
Sbjct: 182 VLTDM 186

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 72.2 bits (178), Expect = 5e-15
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M  ++    I+N+ S        N   Y  SK  V+  T+S+       +R N +CP  +
Sbjct: 120 MIRSRD-PSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATI 178

Query: 61  QTEM 64
            T +
Sbjct: 179 DTPL 182

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 72.2 bits (178), Expect = 5e-15
 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 3/92 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPI-YSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           M  AKK G I+   S +           Y+A+K  V+  T SL T     GIR+N + P 
Sbjct: 140 MIPAKK-GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPY 198

Query: 59  FVQTEMGLKVASKFIDLMGGFVPMEMVVKGAF 90
            V + +   V       +         +KG  
Sbjct: 199 IVASPLLTDVFGVDSSRVEELAHQAANLKGTL 230

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 71.8 bits (177), Expect = 6e-15
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 1   MQAAKKPGVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           M A K  G IINM S A  +  + N  +YS +K  V+  T+S+   + ++GIR N +CP 
Sbjct: 120 MLAQKS-GNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPG 178

Query: 59  FVQTEM 64
            V T  
Sbjct: 179 TVDTPS 184

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 71.8 bits (177), Expect = 7e-15
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M  A   G I+ + SSAGL     +  YSASK G+   T +L       GIR+N + P  
Sbjct: 151 MIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYS 210

Query: 60  VQTEM 64
           V+T M
Sbjct: 211 VETPM 215

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 71.2 bits (175), Expect = 8e-15
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 8/118 (6%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINVLCPEFVQ 61
            + G+ +  G+SA L        Y A+K       + L         G     + P  + 
Sbjct: 135 NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLD 194

Query: 62  TEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKA---GSCLWITNRRGMEYWPT 116
           T    K  S        + P+  V +  FE  T+       GS +    +  +  W  
Sbjct: 195 TPTNRKYMSD--ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKVTTWTN 250

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 71.4 bits (176), Expect = 9e-15
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           M A    G IIN+ S        N   Y  SK  ++  TRS+       IR N +CP  +
Sbjct: 127 MLAIGH-GSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTI 185

Query: 61  QTEM 64
            T M
Sbjct: 186 MTPM 189

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           + A K+ G I+   S  GL    N   Y ASK G+    R++      + IR+N++CP  
Sbjct: 164 IMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSS 223

Query: 60  VQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
           V T M L   +  +       P     + A   +
Sbjct: 224 VATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 15/97 (15%)

Query: 1   MQAA-----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVL 55
           ++A         G ++   S+AG YP    P+Y+A+K  VV   R +       +R+N +
Sbjct: 123 VKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGV 182

Query: 56  CPEFVQTEM----------GLKVASKFIDLMGGFVPM 82
            P  + T++              +    D++   +P+
Sbjct: 183 APGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI 219

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +    + G II + S+AG+        Y+ASK  V    R+      +  IR+N + P  
Sbjct: 147 IIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGP 206

Query: 60  VQTEM 64
           V T M
Sbjct: 207 VNTPM 211

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 4/85 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      G  + + S A          Y  +K  V    +          +R+N + P  
Sbjct: 138 MVRGGG-GSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGL 196

Query: 60  VQTEM--GLKVASKFIDLMGGFVPM 82
           ++T++   +  +++         P+
Sbjct: 197 IRTDLVAAITESAELSSDYAMCTPL 221

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 70.2 bits (173), Expect = 2e-14
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRIN 53
           +Q+A  P        +I + SS G  P+  +P+Y  ++   V    S      R GI + 
Sbjct: 114 LQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLY 173

Query: 54  VLCPEFVQTEM 64
            + P F     
Sbjct: 174 AIGPNFFNNPT 184

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
             A+   GVI+N  S A          YSASK  V  +T++L      K IR+N +CP F
Sbjct: 132 FLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGF 191

Query: 60  VQTEMGLKVASKFIDLMG 77
           V+T M  +      +L G
Sbjct: 192 VKTAMQEREIIWEAELRG 209

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
            +     G IIN  S AG        +YS+SK  V   T++        GI +N  CP  
Sbjct: 125 FKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGI 184

Query: 60  VQTEMGLKVASKFIDLMG 77
           V+T M  ++  +  +  G
Sbjct: 185 VKTPMWAEIDRQVSEAAG 202

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 1   MQAA-----KKPGVIINMGS-SAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRIN 53
            + A        G I+N+ S ++GL+   + P YS +K  +  +TR+      + GIR+N
Sbjct: 129 TKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 188

Query: 54  VLCPEFVQTEM 64
            + P  V T  
Sbjct: 189 SISPGLVATGF 199

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 69.4 bits (171), Expect = 3e-14
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     GVI+ + S A      N   Y++SK       R++      K IR+N + P  
Sbjct: 133 MEKNGG-GVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA 191

Query: 60  VQTEMGLKVAS-KFIDLMGGFVPM 82
           + T+    V + +    M    P+
Sbjct: 192 ILTDALKSVITPEIEQKMLQHTPI 215

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 70.3 bits (173), Expect = 4e-14
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 25/116 (21%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVG------TPAAIMTFGSYAEFTMVPSKHILPVAR 230
            LP   G +  G + AVG  V++ +VG      T       G++A+F  V ++ +     
Sbjct: 62  PLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK-- 119

Query: 231 PD----------PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQ 275
           P           P V       +TA   L ++A    G+ VL+    GG G  A+Q
Sbjct: 120 PAALTMRQASVLPLV------FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQ 169

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 69.5 bits (171), Expect = 4e-14
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
                  G IIN  S A +        YS +K  V   T++       KG  +N   P  
Sbjct: 127 FDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGI 186

Query: 60  VQTEMGLKVASKFIDLMG 77
           V T M  ++ ++   + G
Sbjct: 187 VGTGMWEQIDAELSKING 204

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 70.0 bits (172), Expect = 5e-14
 Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 30/139 (21%)

Query: 168 FSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF---------------- 211
                D+G +LP   G E  G I  VGD V     G   A+  +                
Sbjct: 52  LRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHL 111

Query: 212 ------------GSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGPASG 257
                       G+YAE+ +VP    +   R  +    A LT SG+T   A+ +A     
Sbjct: 112 CDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPT 171

Query: 258 KKVLVTAAAGGTGQFAVQV 276
           K +LV  A GG G  AVQ+
Sbjct: 172 KTLLVVGAGGGLGTMAVQI 190

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 69.1 bits (170), Expect = 6e-14
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 1   MQAA-----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINV 54
           +Q       +  G ++N+ S    +       Y  +K  ++  +++L T    KGIR+N 
Sbjct: 128 IQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNS 187

Query: 55  LCPEFVQTEM 64
           + P ++    
Sbjct: 188 VLPGYIWGGT 197

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                + G IIN GS +   P  N   Y+A+K  +   T+S     +   I    +    
Sbjct: 159 KAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGN 218

Query: 60  VQTEMGLKVASKFIDLMGGFVPME 83
             T+M  ++++  +   G  V  E
Sbjct: 219 AATDMTARMSTGVLQANGE-VAAE 241

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 69.7 bits (171), Expect = 9e-14
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 26/142 (18%)

Query: 160 VNFS-----SGRYFS----DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP--AAI 208
           VN S      G Y S          +      G E +  +  VG +V++++ G     + 
Sbjct: 45  VNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSH 104

Query: 209 MTFGSYAEFTMVPSKHILPVARP------------DPEVVAMLT-SGLTASIALEQAGP- 254
           + FG++    +      + +  P                 A ++ + LTA + L      
Sbjct: 105 VNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKL 164

Query: 255 ASGKKVLV-TAAAGGTGQFAVQ 275
             GK   +        G++A Q
Sbjct: 165 TPGKDWFIQNGGTSAVGKYASQ 186

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +++      I+ + S     P  +    SA++ GV    RS+   +  KG+R+N +    
Sbjct: 133 LESRAD-AAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGL 191

Query: 60  VQTEM 64
           V++  
Sbjct: 192 VESGQ 196

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           ++     G I+ + S  G           Y+A+K   V   + L     +  IR+N +CP
Sbjct: 152 LKQRGG-GAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCP 210

Query: 58  EFVQTEM 64
             ++T +
Sbjct: 211 GAIETNI 217

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 67.5 bits (166), Expect = 2e-13
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 1   MQAA-----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKG--IRI 52
            Q       +  G IINM S +   P+     YSASK  V   TR+     +++G  IR+
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 53  NVLCPEFVQTEM 64
           N + P+ + T M
Sbjct: 179 NSIHPDGIYTPM 190

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 170 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP----AAIMTFGSYAEFTMVPSKHI 225
             N I        G +  G+I  VG  V++  +G       ++   GS+AEFT++ +  +
Sbjct: 50  KANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRV 109

Query: 226 --LPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 275
             LP         A+    LTA  A E+      ++VL+    G       Q
Sbjct: 110 MTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLI-VGFGAVNNLLTQ 160

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           +A+ +   +I+ GS AG       P   +Y A+K  +    ++    + + G+R N++ P
Sbjct: 137 KASGQTSAVISTGSIAGH--TGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSP 194

Query: 58  EFVQTEMGLKVASKFIDLMGGFVPM 82
             V T           D +   +PM
Sbjct: 195 GTVDTAFHADKTQDVRDRISNGIPM 219

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPI----YSASKGGVVLFTRSL-TPYKRKGIRINVL 55
           +      G I+ + SSAGL  + +       Y A+K GVV   R        + IR+N +
Sbjct: 144 LVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSI 203

Query: 56  CPEFVQTEM 64
            P  V+T M
Sbjct: 204 HPSGVETPM 212

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 1   MQAA-----KKPGVIINMGSS-AGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRIN 53
            +          G I+N+ S  AG     +   Y+ +K  +  +TRS      + GIR+N
Sbjct: 129 TKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVN 188

Query: 54  VLCPEFVQTEM 64
            + P  V+T  
Sbjct: 189 SVSPGMVETGF 199

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A + G +I + S AG   + +  +YSASKG +   T+SL   + +  IR+N + P  + T
Sbjct: 147 ASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILT 206

Query: 63  EM 64
            +
Sbjct: 207 PL 208

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 68.6 bits (168), Expect = 3e-13
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 177 RLPFDA--GFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD-- 232
             P  A  G E  G++   G  V  +  G     M   ++    +   + +  +  P   
Sbjct: 261 MYPGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRMVTRI--PAGW 318

Query: 233 --PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
                 ++    LTA  AL + AG   G+ +LV +AAGG G  A+Q+
Sbjct: 319 SFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQL 365

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 1/94 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M    + G +I + S+ GL        Y+ASK GV     SL     R  IR+N + P  
Sbjct: 181 MIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGA 240

Query: 60  VQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
           V TEM L      + L     P        F  +
Sbjct: 241 VNTEMALNEKLLKMFLPHLENPTREDAAELFSQL 274

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 66.7 bits (164), Expect = 3e-13
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M+     G ++ + S    +P  N   Y+ SK  ++  T++L      + IR+N L P  
Sbjct: 138 MEKRGG-GSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGL 196

Query: 60  VQTEM 64
           ++T  
Sbjct: 197 IKTNF 201

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 67.3 bits (165), Expect = 4e-13
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 1   MQAAKKP-----GVIINMGSS-AGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRIN 53
            Q  K+      G I+N+ S  AG       P Y+ +K  +  +TR       + G+R+N
Sbjct: 147 TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN 206

Query: 54  VLCPEFVQTEM 64
            + P  V T  
Sbjct: 207 SVSPGAVATGF 217

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 66.4 bits (163), Expect = 5e-13
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP--YKRKGIRINVLCPE 58
                  G IINM ++            +A+K GV+  T++L     ++ GIR+N + P 
Sbjct: 129 WIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG 188

Query: 59  FVQTEMG---LKVASKFIDLMGGFVPM 82
            ++   G   L ++ +        VP+
Sbjct: 189 PIERTGGADKLWISEEMAKRTIQSVPL 215

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 66.4 bits (163), Expect = 5e-13
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 9/92 (9%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRIN 53
            Q A K       G I+++ S   +  + N      SK  +   TR L      K I +N
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180

Query: 54  VLCPEFVQTEM--GLKVASKFIDLMGGFVPME 83
            +    + T+           ++      P  
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAG 212

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 66.4 bits (163), Expect = 5e-13
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      G I+N  S+A    +Y+   Y  +K G+   T+ L      + IRIN + P  
Sbjct: 135 MTKRGG-GAIVNQSSTAAW--LYS-NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGP 190

Query: 60  VQTEMGLKVAS-KFIDLMGGFVPM 82
           + TE        + +D +   +P+
Sbjct: 191 IDTEANRTTTPKEMVDDIVKGLPL 214

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 66.3 bits (163), Expect = 5e-13
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G IIN+ S+     +     Y ++K   + FTR+L +   + GI +N + P  
Sbjct: 128 MKRNGW-GRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSL 186

Query: 60  VQTEM 64
           V+T  
Sbjct: 187 VRTAT 191

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 66.0 bits (162), Expect = 7e-13
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPI--YSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFV 60
            +K GVI+ +GS +GL          Y+ASK GV  + RSL   +   GIR N + P ++
Sbjct: 139 EQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYI 198

Query: 61  QTEMGLKVASK--FIDLMGGFVPM 82
           +T +      K    D      PM
Sbjct: 199 ETTLTRFGMEKPELYDAWIAGTPM 222

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 66.4 bits (163), Expect = 8e-13
 Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV--ARPDPEV 235
            PF  G E VG++   G           AA++  G  AE   VP   +LP+       E 
Sbjct: 55  PPFIPGMEVVGVV--EGRRY--------AALVPQGGLAERVAVPKGALLPLPEGLSPEEA 104

Query: 236 VAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQV 276
            A   S LTA +AL++A    G+KVLV AAAG  G  AVQV
Sbjct: 105 AAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQV 145

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 65.2 bits (160), Expect = 1e-12
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A + G ++ + S +G   +  + +Y A+KG +   TR L   + +  IR+N + P  + T
Sbjct: 135 ASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIAT 194

Query: 63  EM 64
            +
Sbjct: 195 SL 196

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 65.2 bits (160), Expect = 1e-12
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           MQ A   G I+N+ S AG         Y +SK  V   TR++       GIR+N + P  
Sbjct: 134 MQKAGG-GAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGA 192

Query: 60  VQTEM 64
           ++T+ 
Sbjct: 193 IKTDA 197

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
            +  +  G I+ + S A   P      Y ASK  +     S+       G+R NV+ P  
Sbjct: 120 FRRQRG-GAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGS 178

Query: 60  VQTEM 64
             T+M
Sbjct: 179 TDTDM 183

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 11/119 (9%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRIN 53
              A    K+ G++   G+ A L        Y  +KG V    +SL         G    
Sbjct: 116 SHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 175

Query: 54  VLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKA--GSCLWITNRRG 110
            + P  + T M  K   +       + P+E +V+   + IT   +   GS + +    G
Sbjct: 176 AVLPVTLDTPMNRKSMPE--ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDG 232

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 64.8 bits (159), Expect = 2e-12
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M A    G IIN+GS            Y+A+KGG+ + T S+   + +  I+ N + P +
Sbjct: 132 MIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGY 191

Query: 60  VQTEM 64
           + T+M
Sbjct: 192 ILTDM 196

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPMYNDP--IYSASKGGVVLFTRSL-TPYKRKGIR 51
            Q A         G I+++ +S    PM   P  + S +KGG+   TRSL   + R G+R
Sbjct: 135 TQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVR 194

Query: 52  INVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
           +N + P  ++T M     ++    + G  P+
Sbjct: 195 VNAVSPGVIKTPM---HPAETHSTLAGLHPV 222

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPI--YSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           M      G II   S +G        +  Y  SK  VV  T+++        IR+N + P
Sbjct: 155 MVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP 214

Query: 58  EFVQTEMGLKVASKFIDLMGGFVPM 82
            +++TE+ ++  + +  L    +P+
Sbjct: 215 GYIRTEL-VEPLADYHALWEPKIPL 238

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 63.7 bits (156), Expect = 3e-12
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
           +  +   G ++   SS G     N   Y+ASK       + L    ++ +R+N + P   
Sbjct: 139 LLKSDA-GSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGT 197

Query: 61  QTEM 64
           +T M
Sbjct: 198 RTAM 201

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M AAK+ G IIN+ S AG  P+ +   Y+ASK G+     S     ++  +R++++ P  
Sbjct: 153 MIAAKR-GHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGS 211

Query: 60  VQTEM 64
           V+TE 
Sbjct: 212 VRTEF 216

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 63.3 bits (155), Expect = 5e-12
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 12/92 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPI---------YSASKGGVVLFTRSL-TPYKRKGI 50
               ++ G I+   S +    + N            Y++SK       + L   +   GI
Sbjct: 138 WLQKQQKGSIVVTSSMSSQ--IINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 195

Query: 51  RINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
           R+N L P +V T+    +  K  D     +P+
Sbjct: 196 RVNALSPGYVNTDQTAHMDKKIRDHQASNIPL 227

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 63.3 bits (155), Expect = 6e-12
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A   G II M S AG+       IYSA+KG +    R+L   +   GIR N + P  + T
Sbjct: 140 ASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIAT 199

Query: 63  EMGLKVAS-KFIDLMGGFVPM 82
            +   V   +F  ++    P+
Sbjct: 200 PLAEAVYDDEFKKVVISRKPL 220

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 1   MQAAKKP----GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL 55
           ++ A +     G IINM +S       +  IY+A+K GV   T  L+   + + I +N +
Sbjct: 144 LREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAV 203

Query: 56  CPEFVQTEMGLKVAS-KFIDLMGGFVPME 83
            P    T++ L+  S +  D      P+E
Sbjct: 204 APGPTATDLFLEGKSDEVRDRFAKLAPLE 232

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +  A+K    +++ +             +++K GV   ++SL   + + G+R NV+ P  
Sbjct: 150 LIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGP 209

Query: 60  VQTEMG---LKVASKFIDLMGGFVPM 82
           ++T+     L     F   M G +P 
Sbjct: 210 IKTKGAFSRLDPTGTFEKEMIGRIPC 235

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV 60
              +K G ++N  S A      +  IY+ +K  V   + SL     +  I ++VLCP  V
Sbjct: 139 AGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLV 198

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFE 91
           ++ +      +   L G   P++        
Sbjct: 199 KSYIYASDDIRPDALKGEVKPVDKTAVERLA 229

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G I  + S A      +  IY  SK G      ++    ++  +RI  + P  
Sbjct: 132 MERQHS-GHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 190

Query: 60  VQTEMGLKVASKFIDLMG 77
           V T M  KV  +   LM 
Sbjct: 191 VYTPMWGKVDDEMQALMM 208

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           G ++   S AG         Y+A+K GV+  T +        GIR+N + P  ++T +  
Sbjct: 167 GALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME 226

Query: 67  KVASKFIDLMGGFVPM 82
            V  + +      +P 
Sbjct: 227 SVGEEALAKFAANIPF 242

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 1   MQAAKKP----GVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRIN 53
            + A +     G ++  GS AGL  + + +   Y+A K GVV   R+L     RKG+R+N
Sbjct: 119 ARKAGEVLEEGGSLVLTGSVAGLGAFGLAH---YAAGKLGVVGLARTLALELARKGVRVN 175

Query: 54  VLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
           VL P  +QT M   +     +   G  P+
Sbjct: 176 VLLPGLIQTPMTAGLPPWAWEQEVGASPL 204

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM 64
           GV+ N+ SSA      N+ +Y ASK G+  F  SL    K   +R+  L P  +++E 
Sbjct: 128 GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF 185

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 9/88 (10%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLC 56
           +          G            P+      + + G V  F +S      +GIRIN + 
Sbjct: 97  VLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVS 156

Query: 57  PEFVQTEMGLKVASKFIDLMGGFVPMEM 84
           P  ++         K      GF+P+  
Sbjct: 157 PNVLEESW-----DKLEPFFEGFLPVPA 179

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 20/106 (18%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD--------- 232
           G E  G I  VG  V+   VG     +   G+YAE+ ++P+  ILP   P          
Sbjct: 90  GLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPF--PKGYDAVKAAA 147

Query: 233 -PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
            PE         T    L + AG   G+ VL+     G G  A+Q+
Sbjct: 148 LPETF------FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQL 187

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 16/80 (20%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPI-----------YSASKGGVVLFTRSL-TP 44
           + AA         II  GS AGL      P            YS +K  V  +T  L   
Sbjct: 136 VHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQ 195

Query: 45  YKRKGIRINVLCPEFVQTEM 64
              + IR NV+ P  V T+M
Sbjct: 196 LAPQSIRANVIHPTNVNTDM 215

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+A    G II+  S   + P++ +PIY+ +K  +++F+++L T   +  IR+N + P  
Sbjct: 131 MRARGG-GAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGL 189

Query: 60  VQTEM 64
           + T  
Sbjct: 190 ILTPD 194

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 1   MQAA-----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVL 55
           +  A     K  G ++ + S A      +   Y +SK  +  F  +L   +R  ++   +
Sbjct: 118 VGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEER-QVKAIAV 176

Query: 56  CPEFVQTEMGLKVASKFIDLMGGFVPMEM 84
            P  V T+M + +             ++M
Sbjct: 177 APGIVDTDMQVNIRENVGPSSMSAEQLKM 205

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)

Query: 183 GFEAVGLIAAVGDSVNNVKVG----TPAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVV 236
           G++A G+++AVG  V   + G       +I+  G+ AEF +V  + +   P      E  
Sbjct: 86  GYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAA 145

Query: 237 AMLTSGLTASIAL------EQAGPASGKKVLVTAAAGGTGQFAVQ 275
           A+  + +TA  A        +  P +   +L+   AGG G  AVQ
Sbjct: 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQ 190

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPI----YSASKGGVVLFTRSLTPYKRKGIRINVLCPEF 59
            +  G ++   S +G   + N P     Y+ +K G +   RSL    R   R+N + P +
Sbjct: 149 ERGTGSLVITASMSGH--IANFPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGY 206

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
           + T +   V  +   L    +PM
Sbjct: 207 IDTGLSDFVPKETQQLWHSMIPM 229

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV 60
             A+    IIN+ S + +        Y  SK G+  F++ L       GI +  + P  +
Sbjct: 158 SDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGII 217

Query: 61  QTEMGLKVASKFIDLM-GGFVPM 82
           +++M   V+ K+  L+  G VPM
Sbjct: 218 RSDMTAAVSGKYDGLIESGLVPM 240

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 61.0 bits (149), Expect = 3e-11
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP--YKRKGIRINVLCPE 58
           ++ ++    I    SS G     N   Y  SK       ++L         +R N + P 
Sbjct: 141 LKRSED-ASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPG 199

Query: 59  FVQTEM 64
             +T M
Sbjct: 200 ATRTGM 205

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 61.0 bits (149), Expect = 4e-11
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+  K  G I N+ S A  Y   +  IY ++K  ++    SL       GIR+  LCP +
Sbjct: 132 MKVQKN-GYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGW 190

Query: 60  VQTEMGLKVASKFID 74
           V T+M  K  + F D
Sbjct: 191 VNTDMAKKAGTPFKD 205

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 61.0 bits (149), Expect = 4e-11
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 1   MQAAKKP----GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL 55
           ++ A K     G II + +S           Y+ +K  V  +TR+ +    ++ I +N +
Sbjct: 130 IKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189

Query: 56  CPEFVQTEMGLKVASK-FIDLMGGFVPME 83
            P  + T       +K             
Sbjct: 190 APGPMDTSFFYGQETKESTAFHKSQAMGN 218

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
            A   G        A      +   Y+ SK  V    R     +  +G+R+NV+ P  V+
Sbjct: 129 EAMLAGDEARAIELAEQQGQTH-LAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVE 187

Query: 62  TEM 64
           T +
Sbjct: 188 TPL 190

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 15/113 (13%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVG----TPAAIMTFGSYAEFTMVPSKHI--LPVAR 230
           + P   GF+A+G++ +VG+ V     G       +    GS AE+ ++  + +   P   
Sbjct: 58  KAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNI 117

Query: 231 PDPEVVAM-LTSGLTASIAL-------EQAGPASGKKVLVTAAAGGTGQFAVQ 275
              + V++ LT G+TA   L              GK +L+   AGG G  A Q
Sbjct: 118 SAEQAVSLPLT-GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQ 169

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 61.1 bits (149), Expect = 4e-11
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 1   MQAAKKP----GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINV 54
            + A K     G +I MGS  G    +    +YS SKG +  F R +      K I +NV
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205

Query: 55  LCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
           + P  ++T+M   V  ++I         E+    A +  
Sbjct: 206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 244

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 60.4 bits (147), Expect = 5e-11
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 1   MQAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRIN 53
            + A    K  G++   G++A + P  +   Y  +K  V   T SL            + 
Sbjct: 112 AKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171

Query: 54  VLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKA---GSCLWITNRRG 110
            + P  + T M  K           + P+  + +   +  T+ S     G+ L IT   G
Sbjct: 172 TIMPVTLDTPMNRKWMPN--ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG 229

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G IIN+ S+ GL        Y A+K G++  T+++       G+ +N +CP +
Sbjct: 150 MKKKGW-GRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGY 208

Query: 60  VQTEM 64
           V T +
Sbjct: 209 VLTPL 213

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 36/144 (25%), Positives = 49/144 (34%), Gaps = 38/144 (26%)

Query: 170 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG-------------------------- 203
                   LP   G E VG +A +G+ V    VG                          
Sbjct: 48  PAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT 107

Query: 204 -------TPAAIMTFGSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGP 254
                  TP  + + GS AE+ +V S   L      DP   A LT +GLT   A+ +  P
Sbjct: 108 RAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLP 167

Query: 255 A--SGKKVLVTAAAGGTGQFAVQV 276
               G   +V    GG G   +Q+
Sbjct: 168 LLGPGSTAVVI-GVGGLGHVGIQI 190

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLC 56
           M      G I+ + S+AG   +     Y +SK   V F ++LT      +  G++   LC
Sbjct: 154 MTKNNH-GHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLC 212

Query: 57  PEFVQTEMGLKVASKFIDLM 76
           P FV T      ++     +
Sbjct: 213 PNFVNTGFIKNPSTSLGPTL 232

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 60.3 bits (147), Expect = 7e-11
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 2   QAAKKPGVIINMGSSAGLYPMYNDPI-YSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
             + + G I+N+ S A +       + Y+ASK  +  FT  L      +GIR+N + P  
Sbjct: 154 LYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGI 213

Query: 60  VQTEMGLKVASK-FIDLMGGFVPME 83
           ++T++            M   VPM+
Sbjct: 214 IETDLHASGGLPDRAREMAPSVPMQ 238

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 59.9 bits (146), Expect = 8e-11
 Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
            +   ++N+  +    P+    +Y+ +K  +   TR+       + IR+N + P      
Sbjct: 159 SRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218

Query: 64  MGLKVASKFIDLMGGFVPME 83
             +    +  +     VP+ 
Sbjct: 219 PAM--PQETQEEYRRKVPLG 236

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 28/130 (21%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG---------TPAAIMTFGSYAEFTMVPSK 223
              +      G +  G + AVG  V +++VG                 G+++++T+   +
Sbjct: 57  GQFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR 116

Query: 224 HILPVARPD----PEVVAMLTSGLTASIALEQAG-------------PASGKKVLVTAAA 266
               +  P      +  A+     TA +A++  G              +    VLV   +
Sbjct: 117 VWAKI--PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGS 174

Query: 267 GGTGQFAVQV 276
             T    +Q+
Sbjct: 175 TATATVTMQM 184

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 1   MQAAKKP----GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVL 55
            + A       G I+   S AG          Y+ SKG V+ FTR L       IR+N +
Sbjct: 126 AKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAV 185

Query: 56  CPEFVQTEMGLKVA-SKFIDLMGGFVPM 82
           CP  + T         +  + + G   +
Sbjct: 186 CPGMISTTFHDTFTKPEVRERVAGATSL 213

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 59.4 bits (145), Expect = 1e-10
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLY--PMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCP 57
           M A    G I+N+GS +G           Y ASKG V   TR+L   +  +G+R+N L P
Sbjct: 131 MVARGA-GAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAP 189

Query: 58  EFVQTEM--GLKVASKFIDLMGGFVPM 82
            +V TEM   ++   +  +      PM
Sbjct: 190 GYVATEMTLKMRERPELFETWLDMTPM 216

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
                I+N+  +    P     +Y+  K  +V  T+S        GIR+N + P      
Sbjct: 171 SSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP 230

Query: 64  MGL 66
           + +
Sbjct: 231 VAM 233

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 21/107 (19%)

Query: 183 GFEAVGLIAAVGDSVN-NVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD-------- 232
           G EA G +A +G     + K+G    A++  G  A++  VP   ++P+  P+        
Sbjct: 84  GLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPI--PEGLTLTQAA 141

Query: 233 --PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
             PE        LTA   L       +G  VL+ A   G G  A+Q+
Sbjct: 142 AIPEA------WLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQL 182

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 59.0 bits (144), Expect = 1e-10
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+AA K G +I++ S+       N   Y A+KGGV+ FTR+L T   +  I  N + P  
Sbjct: 126 MRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGL 185

Query: 60  VQTEM 64
           ++++ 
Sbjct: 186 IESDG 190

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 3   AAKKPGVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFV 60
           +A+ P  +IN+GS AG+  M      Y  SK  +   +R L      + I +NV+ P   
Sbjct: 156 SAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRF 215

Query: 61  QTEM--GLKVASKFIDLMGGFVPM 82
            + M   +    + ++     +PM
Sbjct: 216 PSRMTRHIANDPQALEADSASIPM 239

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 1   MQAAK-KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEF 59
            Q +      ++N+ S   L P     +Y A K    +  + L   +   +R+    P  
Sbjct: 141 FQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA-AEEPSVRVLSYAPGP 199

Query: 60  VQTEM 64
           +  +M
Sbjct: 200 LDNDM 204

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
           A   G I+ + S        N   Y+ASK  VV  TR+L + +  +G+ +N L P +V T
Sbjct: 154 AHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVT 213

Query: 63  EM 64
             
Sbjct: 214 AN 215

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 33/137 (24%), Positives = 48/137 (35%), Gaps = 34/137 (24%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI------------------------ 208
             G RLP   G E  G I  VG+ +  VK G    +                        
Sbjct: 54  KQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI 112

Query: 209 ----MTFGSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGPASGKK--- 259
                T G ++E+ +V S   L       P   A L  +G T+  A+ QA P   K    
Sbjct: 113 IPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP 172

Query: 260 VLVTAAAGGTGQFAVQV 276
           V++    GG   + +Q+
Sbjct: 173 VVIVNGIGGLAVYTIQI 189

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 1   MQAAKKP----GVIINMGSS-AGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINV 54
           +++A +     G II +GS+ A L P     +YSASK  +   T+ L      +GI +N+
Sbjct: 148 IRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNI 207

Query: 55  LCPEFVQTEMGLKVASKFIDLMGGFVPME 83
           + P    T+M         +     +   
Sbjct: 208 VHPGSTDTDM-NPADGDHAEAQRERIATG 235

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE 63
           +K G II + S+    P      Y++++ G      +L        I +  + P ++ +E
Sbjct: 122 RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 181

Query: 64  M 64
            
Sbjct: 182 D 182

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 1   MQAAKKP----GVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINV 54
            Q   K     G II   S A  +  + N  +Y+ SK  V  F R+       KG+ +N 
Sbjct: 138 AQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNC 197

Query: 55  LCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
           + P  V+T+M  + +  +       +P E + +G   + 
Sbjct: 198 IAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN 236

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M  A + G+I+ + S   L  M+N   Y   K              +R G+    L P  
Sbjct: 136 MVPAGQ-GLIVVISSPGSLQYMFN-VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGI 193

Query: 60  VQTEMGLKVASK 71
           VQTE+  +  +K
Sbjct: 194 VQTELLKEHMAK 205

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 1   MQAAKKP----GVIINMGSS-AGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINV 54
            + A +     G I+   S+ +  + +    +YS SKG V  F R  +     K I +N 
Sbjct: 135 AREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNA 194

Query: 55  LCPEFVQTEMGLKVASKFIDLMGGFVPMEMV 85
           + P    T+M  +V+  +I     +   +  
Sbjct: 195 VAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQ 225

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           GVI+N  S A          Y+ASKGGV   T        R GIR+  + P    T M  
Sbjct: 143 GVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA 202

Query: 67  KVASKFIDLMGGFVPM 82
            +     D +   VP 
Sbjct: 203 GMPQDVQDALAASVPF 218

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 36/141 (25%)

Query: 171 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI---------------------- 208
              +  +LP+  G E VG I  V + V  ++ G P  +                      
Sbjct: 66  HELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCEN 125

Query: 209 ------MTFGSYAEFTMVPSKHILPVAR-----PDPEVVAMLTSGLTASIALEQAGPA-- 255
                    G +AEF     + ++ + +        E+  +  +G+TA  A+++A     
Sbjct: 126 LEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLY 185

Query: 256 SGKKVLVTAAAGGTGQFAVQV 276
            G  V +    GG G  AVQ+
Sbjct: 186 PGAYVAIV-GVGGLGHIAVQL 205

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+A    G IIN+ S  GL        Y A+K GVV  T+ +        +  N +CP +
Sbjct: 125 MRARNW-GRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGW 183

Query: 60  VQTEM 64
           V T +
Sbjct: 184 VLTPL 188

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
               GVI+N+ ++ G           ++K  V   TR L   +  + IR+N L P  +  
Sbjct: 153 RDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISG 212

Query: 63  EMG---LKVASKFIDLMGGFVPM 82
             G   L      +       P+
Sbjct: 213 TEGLRRLGGPQASLSTKVTASPL 235

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-PYKRKGIRINVLCPEFVQTEMGL 66
           GVIIN  S A          YSASKGG+V  T  +       GIR+  + P    T +  
Sbjct: 150 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT 209

Query: 67  KVASKFIDLMGGFVPM 82
            +  K  + +   VP 
Sbjct: 210 SLPEKVCNFLASQVPF 225

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
            +  K     +  G+      +     Y+A+KG +  +  +      R+G+ + ++    
Sbjct: 108 ARFQKG-ARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 60  VQTEM 64
           V T +
Sbjct: 167 VATGL 171

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 57.1 bits (139), Expect = 6e-10
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPI--YSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFV 60
               G ++ +GS          PI  Y+ +K  ++  TR+L   + R GIR+N+LCP +V
Sbjct: 118 EAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYV 177

Query: 61  QTEM 64
           +TE 
Sbjct: 178 ETEF 181

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 3   AAKKPGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFV 60
            A + G      +          +  Y+ SK  + +  R     +   G+R+N + P   
Sbjct: 129 LALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGAT 188

Query: 61  QTEM 64
           +T +
Sbjct: 189 ETPL 192

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 56.8 bits (138), Expect = 7e-10
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
            +       ++ + S+A   P   +  Y A K  V     S+    K K ++I  + P  
Sbjct: 118 YKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175

Query: 60  VQTEMGLKVASKFIDLMGGFVPME 83
           + TE   + + K +D        +
Sbjct: 176 MATEF-WETSGKSLDTSSFMSAED 198

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 57.6 bits (140), Expect = 7e-10
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPI----YSASKGGVVLFTRSLTPYKRKGIRINVLCPEF 59
               G +I   S +G   + N P     Y+ +K       +SL        R+N + P +
Sbjct: 161 KNGKGSLIITSSISGK--IVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGY 218

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
           + T++    +           P+
Sbjct: 219 IDTDITDFASKDMKAKWWQLTPL 241

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRI-NVLCPE 58
           M A  + G I   G++A L        ++++K G+    +S+      K I + +++   
Sbjct: 129 MLAHGQ-GKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDS 187

Query: 59  FVQTEMGLKVASKFIDLMGGFVP 81
            V T    +   +         P
Sbjct: 188 GVDTAWVRERREQMFGKDALANP 210

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 57.1 bits (139), Expect = 8e-10
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +  G I+ + S  G    +    Y +SK GV+  T+         GI +N + P  ++T
Sbjct: 147 KRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIET 206

Query: 63  EM 64
            M
Sbjct: 207 PM 208

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M      G ++ +GS   L P  +  + +  +  V+   R+L       G+ +N + P  
Sbjct: 131 MVEKGW-GRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSL 189

Query: 60  VQTEM 64
           + T+ 
Sbjct: 190 ILTDR 194

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +      G I+N+GS AG  P      Y+ASK G++    +     +   +R+  + P  
Sbjct: 124 LLRRGG-GTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGS 182

Query: 60  VQTEMGLKV 68
           V T      
Sbjct: 183 VDTGFAGNT 191

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSLTP-YKRKGI 50
           +QA          G ++   S  G  P+   P    Y A+K   + F R+         I
Sbjct: 127 VQACLDALIASGSGRVVLTSSITG--PITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184

Query: 51  RINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
            +N + P  + TE  L+   ++I  M   +P 
Sbjct: 185 TVNAIMPGNIMTEGLLENGEEYIASMARSIPA 216

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFT----RSLTPYKRKGIRINVLCPEFVQTE 63
           GVI+N  S A          Y+ASKGGVV  T    R L      GIR+  + P    T 
Sbjct: 128 GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTP 184

Query: 64  MGLKVASKFIDLMGGFVPM 82
           +   +  K    +   VP 
Sbjct: 185 LLQGLPEKAKASLAAQVPF 203

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFT----RSLTPYKRKGIRINVLCPEFVQTE 63
           GVIIN  S A          YSASKGGVV  T    R L       IR+  + P    T 
Sbjct: 143 GVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA---SHRIRVMTIAPGLFDTP 199

Query: 64  MGLKVASKFIDLMGGFVPM 82
           +   +  +    +G  VP 
Sbjct: 200 LLASLPEEARASLGKQVPH 218

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 11/88 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-----GIRINVL 55
           ++AA   G +I + S AG  P   + IY+ASK  +     +     RK     GIR++ +
Sbjct: 121 LRAAS--GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAF----RKEEANNGIRVSTV 174

Query: 56  CPEFVQTEMGLKVASKFIDLMGGFVPME 83
            P    T M   +           + +E
Sbjct: 175 SPGPTNTPMLQGLMDSQGTNFRPEIYIE 202

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 8/65 (12%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS----LTPYKRKGIRINVLCPEF 59
           A +   I+++              Y A+K G+   T S      P     +++N + P  
Sbjct: 146 ASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP----LVKVNGIAPAL 201

Query: 60  VQTEM 64
           +  + 
Sbjct: 202 LMFQP 206

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 1   MQAAKKP----GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVL 55
           +Q A         IIN+ S+A    + +   YS +KG +   T +L      +GI +N +
Sbjct: 130 IQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAI 189

Query: 56  CPEFVQTEM--GLKVASKFIDLMGGFVPME 83
            P FV+T+M   L                 
Sbjct: 190 LPGFVKTDMNAELLSDPMMKQYATTISAFN 219

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 8   GVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMG 65
             I+ +     L P +     Y  +K G+ L    +    +  GI  N L P        
Sbjct: 145 PHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA 204

Query: 66  LKVASKFIDLMGGFVPMEMVVKGAFELITDES 97
           ++      + M      E+    A+ ++   S
Sbjct: 205 VQNLLGGDEAMARSRKPEVYADAAYVVLNKPS 236

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMY---NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLC 56
           + +    G IIN+ S  G        N   Y+ASK GV+  T++      R GIR N + 
Sbjct: 138 LVSNGCRGSIINISSIVGKVGNVGQTN---YAASKAGVIGLTQTAARELGRHGIRCNSVL 194

Query: 57  PEFVQTEMGLKVASKFIDLMGGFVPM 82
           P F+ T M  KV  K +D +   +PM
Sbjct: 195 PGFIATPMTQKVPQKVVDKITEMIPM 220

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINVLCPEFV 60
            +  G I+ + S AG         YSASK  +  F  S+       R  + I +     +
Sbjct: 153 KQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 212

Query: 61  QTEMGLKVASKFIDLMG 77
            TE  +K  S  + +  
Sbjct: 213 DTETAMKAVSGIVHMQA 229

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M+     G IIN+ S+ GL    N   Y A+K GVV FT+        +GI  N +CP +
Sbjct: 129 MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGW 187

Query: 60  VQTEM 64
           V+T +
Sbjct: 188 VRTPL 192

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
                IINM  +    P+    IY+ +KG +   TRS         IR+N + P      
Sbjct: 211 GTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270

Query: 64  MGL 66
             +
Sbjct: 271 DDM 273

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 55.6 bits (135), Expect = 3e-09
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 2   QAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLC 56
           Q A     K   II   S     P  +   Y+A+K  ++ ++R L      KGIR+N++ 
Sbjct: 169 QEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVA 228

Query: 57  PEFVQTEMGL--KVASKFIDLMGGFVPM 82
           P  + T + +        I   G   PM
Sbjct: 229 PGPIWTALQISGGQTQDKIPQFGQQTPM 256

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 55.6 bits (135), Expect = 3e-09
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 4   AKKPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
                 IIN+GS       M N   Y+ASKGGV   T++L   + R GIR+NV+ P + +
Sbjct: 147 ESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR 206

Query: 62  TEM 64
           T+M
Sbjct: 207 TKM 209

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 8   GVIINMGSSAGLYPMY--NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCP-EFVQTE 63
             I+ +     L P +      Y+ +K G+ L T  L   +  +G+ IN L P   + T+
Sbjct: 142 PHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD 201

Query: 64  M 64
            
Sbjct: 202 A 202

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 33/132 (25%)

Query: 177 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------------------------- 209
           +     G +  G++   G  V   K G    +                            
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFE 167

Query: 210 -TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPAS---GKKVLVT 263
             FG  AE+ +V +  +LP        E         TA   L     A    G  VL+ 
Sbjct: 168 TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIW 227

Query: 264 AAAGGTGQFAVQ 275
            A+GG G +A+Q
Sbjct: 228 GASGGLGSYAIQ 239

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
                IINM  +    P+    IY+ +KG +   TRS         IR+N + P      
Sbjct: 174 GTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 233

Query: 64  MGL 66
             +
Sbjct: 234 DDM 236

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSLTP-YKRKGI 50
           +QA   P      G +I   S  G  P+   P    Y ASK   + F R+       +G+
Sbjct: 158 VQACLAPLTASGRGRVILTSSITG--PVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215

Query: 51  RINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
            +N + P  + TE  + +  ++I  M   +PM
Sbjct: 216 TVNAILPGNILTEGLVDMGEEYISGMARSIPM 247

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M   K+ G +I + S A + P      YSA+K   +  +RSL        + +N + P  
Sbjct: 131 MIERKE-GRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGS 189

Query: 60  VQTEM 64
             TE 
Sbjct: 190 TLTEG 194

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +  G I+N+                A++ GV   T+SL   +   GIRIN + P  + +
Sbjct: 148 KEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYS 206

Query: 63  EMGLK----VASKFIDLMGGFVPM 82
           +  ++        F +     +P 
Sbjct: 207 QTAVENYGSWGQSFFEGSFQKIPA 230

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M+ A   G I+N+ S+ G   +     Y+ASK GVV FT+S+     + GI +N +CP +
Sbjct: 149 MREAGW-GRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGY 207

Query: 60  VQTEM 64
           V+T M
Sbjct: 208 VETPM 212

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 54.0 bits (131), Expect = 8e-09
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 5   KKPGVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
           K PG I+   S   L      N   Y+AS  GVV  TR+L     R GIR+N L P F++
Sbjct: 126 KNPGSIVLTASRVYLGNLGQAN---YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIE 182

Query: 62  TEMGLKVASKFIDLMGGFVPM 82
           T M  KV  K  +      P+
Sbjct: 183 TRMTAKVPEKVREKAIAATPL 203

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 54.2 bits (131), Expect = 9e-09
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M      G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP F
Sbjct: 147 MLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGF 205

Query: 60  VQTEM 64
           V+T M
Sbjct: 206 VETPM 210

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 35/135 (25%)

Query: 174 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI------------------------- 208
           +  +LP   G E  G++  +G++V   K+G  A I                         
Sbjct: 56  LPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHAD 115

Query: 209 ----MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKV 260
                  GS+ ++    +     +  P   D   VA +L +G+T   AL+ A   +G  V
Sbjct: 116 LSGYTHDGSFQQYATADAVQAAHI--PQGTDLAQVAPILCAGITVYKALKSANLMAGHWV 173

Query: 261 LVTAAAGGTGQFAVQ 275
            ++ AAGG G  AVQ
Sbjct: 174 AISGAAGGLGSLAVQ 188

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 29/126 (23%), Positives = 39/126 (30%), Gaps = 33/126 (26%)

Query: 183 GFEAVGLIAAVGDSVNNVKVG----------------TPAAIMT------------FGSY 214
           G +  G++   G  VN  + G                     M             FG  
Sbjct: 122 GSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGL 181

Query: 215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA---SGKKVLVTAAAGGT 269
           AE  +V S  ++P        E  A      TA   L     A    G  VL+  A+GG 
Sbjct: 182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGL 241

Query: 270 GQFAVQ 275
           G +A Q
Sbjct: 242 GSYATQ 247

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 36/136 (26%)

Query: 174 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI------------------------- 208
           +   LPF  G E VG ++AVG  V+ VK G    +                         
Sbjct: 53  VKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQ 112

Query: 209 ----MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKV 260
                  G Y E+ +    ++  +  P       +A +L +G+T    L+      G+ V
Sbjct: 113 NTGYSVNGGYGEYVVADPNYVGLL--PDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV 170

Query: 261 LVTAAAGGTGQFAVQV 276
           ++ +  GG G  AVQ 
Sbjct: 171 VI-SGIGGLGHVAVQY 185

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 52.5 bits (127), Expect = 2e-08
 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M+     G I+ + S + + P+ N    ++++  +  F ++L+      GI +N + P +
Sbjct: 127 MKEKGW-GRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 185

Query: 60  VQTEM 64
            +TE 
Sbjct: 186 TETER 190

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 52.9 bits (128), Expect = 3e-08
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 36/135 (26%)

Query: 174 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI------------------------- 208
           +  +LP   G E VG++  VG  V ++KVG    I                         
Sbjct: 51  VKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK 110

Query: 209 ----MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKV 260
                  G YAE+    + +++ +  P     E  A +  +G+T   AL+  G   G+ V
Sbjct: 111 NAGYSVDGGYAEYCRAAADYVVKI--PDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWV 168

Query: 261 LVTAAAGGTGQFAVQ 275
            +    GG G  AVQ
Sbjct: 169 AI-YGIGGLGHVAVQ 182

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 52.5 bits (127), Expect = 3e-08
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 2   QAA----KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLC 56
           +AA    K+  VIIN  S            YSA+KG +V FTRSL     +KGIR+N + 
Sbjct: 166 KAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVA 225

Query: 57  PEFVQTEMGLKVASKF----IDLMGGFVPM 82
           P  + T +   + S F    +   G  VPM
Sbjct: 226 PGPIWTPL---IPSSFDEKKVSQFGSNVPM 252

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 35/131 (26%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVG-----TPAAIMTF--------------------- 211
           LP   G +  G++ AVG  V     G      P                           
Sbjct: 57  LPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEH 116

Query: 212 --GSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTA 264
             G+YAE+ ++P  ++ P   P      E  A+  + LTA   + ++ G   G  VLV A
Sbjct: 117 RHGTYAEYVVLPEANLAPK--PKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMA 174

Query: 265 AAGGTGQFAVQ 275
           A  G    A+Q
Sbjct: 175 AGSGVSVAAIQ 185

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 15/100 (15%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMY--NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCP- 57
           ++ +K    I+N+     L P++      Y+ +K G+ ++   +    +  I +N L P 
Sbjct: 175 LKKSKV-AHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPK 233

Query: 58  EFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDES 97
             + T     +    I+       ++++   A+ +     
Sbjct: 234 TAIHTAAMDMLGGPGIESQCR--KVDIIADAAYSIFQKPK 271

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 51.4 bits (124), Expect = 6e-08
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK---GIRINVLCPEFV 60
           A++ G IIN+GS   L  +    +Y A+K  V   +  L    R+    IR+  + P  V
Sbjct: 129 AQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGL----RQESTNIRVTCVNPGVV 184

Query: 61  QTEMGL 66
           ++E+  
Sbjct: 185 ESELAG 190

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR-----KGIRINVL 55
           + A      I+N+GS AG +P     +Y  +K  V  F+ +L    R      G+R+  L
Sbjct: 144 LIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNL----RCDLQGTGVRVTNL 199

Query: 56  CPEFVQTE 63
            P   ++E
Sbjct: 200 EPGLCESE 207

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 51.2 bits (123), Expect = 9e-08
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 2   QAAKKPGVIINMGSSAG---LYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCP 57
                   IINM S  G            Y  SK  +   T+SL+     + I    L P
Sbjct: 160 PMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP 219

Query: 58  EFVQTEMG 65
            +V+T+MG
Sbjct: 220 GWVKTDMG 227

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 2   QAAKKPGVIINMGSSAG-------LYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRIN 53
           Q +     +I + S  G           +    Y  SK  + +F R+L    K   + + 
Sbjct: 139 QLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVV 198

Query: 54  VLCPEFVQTEMG 65
             CP +VQT +G
Sbjct: 199 NFCPGWVQTNLG 210

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR-----KGIRINVLCPE 58
           A+  G IIN+ S AG     +   Y  +K  V   + ++    R       +R+  + P 
Sbjct: 135 ARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV----REEVAASNVRVMTIAPS 190

Query: 59  FVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNR 108
            V+TE+     S+           +        ++  +  A + L+   +
Sbjct: 191 AVKTELLSHTTSQ-----QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQ 235

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
            Q  K  G I+N  S AGLY  +    Y+++K  ++ F  +L     +  I+ N + P  
Sbjct: 137 FQKQKY-GRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP-L 194

Query: 60  VQTEM 64
            ++ M
Sbjct: 195 ARSRM 199

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
               +  G IIN+ S++G+Y  +    YS+SK G++  ++++     +  I++N++ P  
Sbjct: 441 FVEKQF-GRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-H 498

Query: 60  VQTEM 64
            +T M
Sbjct: 499 AETAM 503

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 5   KKPGVIINMGSSAGLYPMY---NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV 60
           +K G IIN+ S AG+       N   Y+ASK G++ FT+S+   +  KGI  N + P  +
Sbjct: 132 QKSGKIINITSIAGIIGNAGQAN---YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGII 188

Query: 61  QTEMGLKVASKFIDLMGGFVPM 82
           +T+M   +  K  ++    +P+
Sbjct: 189 KTDMTDVLPDKVKEMYLNNIPL 210

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
            K G +I +GS +GL+ + N   Y+ASK GV+   RS+     +  +  NV+ P ++ T+
Sbjct: 130 NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 189

Query: 64  MGLKVASKFIDLMGGFVPM 82
           M   +  +       F+P 
Sbjct: 190 MTRALDERIQQGALQFIPA 208

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 1   MQAAKKP-GVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINV 54
           M+      G IIN+ S +G    P+     YSA+K  V   T  L       +  IR   
Sbjct: 157 MKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATC 216

Query: 55  LCPEFVQTEM 64
           + P  V+T+ 
Sbjct: 217 ISPGVVETQF 226

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 5   KKPGVIINMG--SSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
           +  G IIN G   +           ++A+K G+V  T+++       GI  N++CP  + 
Sbjct: 136 QNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDII 195

Query: 62  TEMGLKVASKFIDLMGGFVPM 82
            EM      +   L     P+
Sbjct: 196 GEMKEATIQEARQLKEHNTPI 216

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 9/65 (13%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRK-----GIRINVLCPE 58
           AK  G I+N+GS AG        IY ASK  V  FT SL    RK      IR+ ++ P 
Sbjct: 164 AKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSL----RKELINTKIRVILIAPG 219

Query: 59  FVQTE 63
            V+TE
Sbjct: 220 LVETE 224

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
            + G IIN+ S  GL         N   YS+SK GV+ FT+SL      + I +N + P 
Sbjct: 170 NRYGRIINISSIVGL--TGNVGQAN---YSSSKAGVIGFTKSLAKELASRNITVNAIAPG 224

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F+ ++M  K++ +    +   +P 
Sbjct: 225 FISSDMTDKISEQIKKNIISNIPA 248

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           M+     G II   S++G+Y  +    YSA+K G++    +L    ++  I  N + P  
Sbjct: 138 MKKQNY-GRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNA 196

Query: 60  VQTEM 64
             + M
Sbjct: 197 G-SRM 200

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 49.0 bits (118), Expect = 4e-07
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 5   KKPGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
           K+ G IIN+ S  G+    N     Y ASK G++  T+SL+     +GI +N + P F++
Sbjct: 133 KRYGRIINISSIVGI--AGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIK 190

Query: 62  TEMGLKVASKFIDLMGGFVPM 82
           ++M  K+  K  + +   +P+
Sbjct: 191 SDMTDKLNEKQREAIVQKIPL 211

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           ++ G IIN+ S  G+  +      N   Y A+K G++ F+++L      + I +N + P 
Sbjct: 150 RRYGRIINITSIVGV--VGNPGQTN---YCAAKAGLIGFSKALAQEIASRNITVNCIAPG 204

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F+++ M  K+  K  + +   +PM
Sbjct: 205 FIKSAMTDKLNEKQKEAIMAMIPM 228

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE 63
            K G ++ + S  GL        Y+ASK G+V F RSL      + I  NV+ P FV T+
Sbjct: 136 AKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTD 195

Query: 64  MGLKVASKFIDLMGGFVPM 82
           M   +  +    +   VP+
Sbjct: 196 MTKVLTDEQRANIVSQVPL 214

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 48.6 bits (117), Expect = 6e-07
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 17/94 (18%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRK 48
            QAA K       G IIN+ S  GL  +      N   Y+A+K GV+ F+++       +
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGL--IGNIGQAN---YAAAKAGVIGFSKTAAREGASR 172

Query: 49  GIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
            I +NV+CP F+ ++M  K+       + G +P+
Sbjct: 173 NINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL 206

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 48.3 bits (116), Expect = 6e-07
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 14/89 (15%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR-----KGIRINVLCPEF 59
           +  G ++ M S AG   + N  +Y A+K GV  F+ +L    R     +G+R+ V+ P  
Sbjct: 132 RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETL----RQEVTERGVRVVVIEPGT 187

Query: 60  VQTEMGLKV-----ASKFIDLMGGFVPME 83
             TE+   +        +   +     ++
Sbjct: 188 TDTELRGHITHTATKEMYEQRISQIRKLQ 216

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           K+ G II++GS  G          N   Y A+K GV+ F++SL      + I +NV+ P 
Sbjct: 131 KRWGRIISIGSVVGS--AGNPGQTN---YCAAKAGVIGFSKSLAYEVASRNITVNVVAPG 185

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F+ T+M  K+  +    +   +P 
Sbjct: 186 FIATDMTDKLTDEQKSFIATKIPS 209

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 17/94 (18%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRK 48
            +A  +       G I+N+ S  G+         N   Y A+K GV+  T++       +
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVGV--TGNPGQAN---YVAAKAGVIGLTKTSAKELASR 175

Query: 49  GIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
            I +N + P F+ T+M   +       M   +P 
Sbjct: 176 NITVNAIAPGFIATDMTDVLDENIKAEMLKLIPA 209

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 49.0 bits (117), Expect = 9e-07
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCP 57
           G II   S++G+Y  +    Y+A+K G++    ++     R  +  NV+ P
Sbjct: 154 GRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 8   GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM 64
           G IIN  S AGL        YSA+K G+   T        R G+ +N + P   +T M
Sbjct: 172 GRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP-SARTRM 228

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 5   KKPGVIINMGSSAGLYPMY---NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV 60
           +  G IIN+ S  G    +   N   YS +K G+  FT SL      KG+ +N + P ++
Sbjct: 140 RGWGRIINISSVNGQKGQFGQTN---YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYI 196

Query: 61  QTEMGLKVASKFIDLMGGFVPM 82
            T+M   +    ++ +   +P+
Sbjct: 197 GTDMVKAIRPDVLEKIVATIPV 218

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR-----KGIRINVLCPE 58
            +  G IIN+GS+AG +P     +Y A+K  V  F+ +L    R       +R+  + P 
Sbjct: 123 ERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL----RTDLHGTAVRVTDIEPG 178

Query: 59  FVQTE 63
            V   
Sbjct: 179 LVGGT 183

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 11/66 (16%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           ++ G IIN+ S  G   M      N   YSA+K GV+  T+++      +GI +N + P 
Sbjct: 155 QRSGRIINIASVVGE--MGNPGQAN---YSAAKAGVIGLTKTVAKELASRGITVNAVAPG 209

Query: 59  FVQTEM 64
           F+ T+M
Sbjct: 210 FIATDM 215

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           ++ G I+N+ S  G          N   YS +K G++ FT+SL      + + +N + P 
Sbjct: 134 QRWGRIVNISSVVGF--TGNVGQVN---YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPG 188

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F++T+M   ++ +        +P+
Sbjct: 189 FIETDMTAVLSEEIKQKYKEQIPL 212

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           ++ G IIN+ S  G   +      N   Y A+K GV+  T+S       +GI +N + P 
Sbjct: 131 QRSGAIINLSSVVGA--VGNPGQAN---YVATKAGVIGLTKSAARELASRGITVNAVAPG 185

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F+ ++M   ++ +  + M   +P+
Sbjct: 186 FIVSDMTDALSDELKEQMLTQIPL 209

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 17/94 (18%)

Query: 1   MQAAKKP------GVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRK 48
            +A  +P      G I+N+ S  G          N   Y+A+K GV   TR+L      +
Sbjct: 144 SRAVLRPMMKARGGRIVNITSVVGS--AGNPGQVN---YAAAKAGVAGMTRALAREIGSR 198

Query: 49  GIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM 82
           GI +N + P F+ T+M   +  +    +   +P+
Sbjct: 199 GITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPL 232

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 9/74 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKR---KGIRINVLCP 57
           ++       ++   S      +     Y ++K       R+     +     +R   L P
Sbjct: 126 LKRTGG-LALVT-TSDVSARLIPYGGGYVSTKWAARALVRTF----QIENPDVRFFELRP 179

Query: 58  EFVQTEMGLKVASK 71
             V T  G     K
Sbjct: 180 GAVDTYFGGSKPGK 193

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 11/66 (16%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
            + G I+N+ S  G+  +      N   Y ASK G++ FTR++   Y ++GI +N + P 
Sbjct: 129 ARFGRIVNITSVVGI--LGNPGQAN---YVASKAGLIGFTRAVAKEYAQRGITVNAVAPG 183

Query: 59  FVQTEM 64
           F++TEM
Sbjct: 184 FIETEM 189

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 11/84 (13%)

Query: 5   KKPGVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE 58
           K+ G IIN+GS  G   M      N   Y+A+K GV+ FT+S+      +G+ +N + P 
Sbjct: 132 KRQGRIINVGSVVGT--MGNAGQAN---YAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 186

Query: 59  FVQTEMGLKVASKFIDLMGGFVPM 82
           F++T+M   +  +        VP 
Sbjct: 187 FIETDMTKALNDEQRTATLAQVPA 210

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 5   KKPGVIINMGSSAGLYPMY---NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV 60
           ++ G I+N+GS  G    +   N   Y+++K G+  FT++L     ++GI +N + P ++
Sbjct: 152 RRFGRIVNIGSVNGSRGAFGQAN---YASAKAGIHGFTKTLALETAKRGITVNTVSPGYL 208

Query: 61  QTEM 64
            T M
Sbjct: 209 ATAM 212

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 45.7 bits (108), Expect = 6e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 28  YSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG 65
           Y+ SK  +  +TR L   K    ++N +CP  V+TEM 
Sbjct: 236 YTTSKACLNAYTRVLA-NKIPKFQVNCVCPGLVKTEMN 272

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 45.7 bits (109), Expect = 8e-06
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 8   GVIINMGSSAGLYPM-----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
           G +I + S AG+         N   Y+ +K G++    +L P    KGI IN + P F++
Sbjct: 340 GRVIGLSSMAGI--AGNRGQTN---YATTKAGMIGLAEALAPVLADKGITINAVAPGFIE 394

Query: 62  TEM 64
           T+M
Sbjct: 395 TKM 397

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 26/138 (18%), Positives = 43/138 (31%), Gaps = 40/138 (28%)

Query: 173 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MT 210
           +  S  P   G E  G++   G +V ++  G                           + 
Sbjct: 70  EFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR 129

Query: 211 F------GSYAEFTMVPSKHILPVARPD---PEVVAM---LTSGLTASIALEQAGPASGK 258
                  G +AE+ +VP K    +  P    P   A    L   L     ++ +G  +G 
Sbjct: 130 AIGIHRDGGFAEYVLVPRKQAFEI--PLTLDPVHGAFCEPLACCLH---GVDLSGIKAGS 184

Query: 259 KVLVTAAAGGTGQFAVQV 276
            V +    G  G   VQ+
Sbjct: 185 TVAIL-GGGVIGLLTVQL 201

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 33/128 (25%)

Query: 178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-------------------------G 212
            PF    +  G++ AVG SV   + G                                 G
Sbjct: 83  FPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPG 142

Query: 213 SYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAG 267
             +E+ ++P    +    P      E   +  +GLTA  AL E+    +G +V+V    G
Sbjct: 143 VLSEYVVLPEGWFVAA--PKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTG 199

Query: 268 GTGQFAVQ 275
           G   F +Q
Sbjct: 200 GVALFGLQ 207

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 5/48 (10%)

Query: 23  YNDPIYSASKGGVVLFTRSL-----TPYKRKGIRINVLCPEFVQTEMG 65
           +    Y  +K GV + +R          K   I +N  CP +V+T+M 
Sbjct: 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 6e-05
 Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 26/138 (18%)

Query: 35  VVLFTR------SLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKG 88
           ++L TR       L+      I ++         E    +  K++D     +P E++   
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLLKYLDCRPQDLPREVL-TT 325

Query: 89  ---AFELITDESKAGSCLWITNRRGMEYWPTSE-EKAKYLVRSS------GSMKRS-SSQ 137
                 +I +  + G   W       + W     +K   ++ SS         ++     
Sbjct: 326 NPRRLSIIAESIRDGLATW-------DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 138 VPLNLNVQLPESFEKLLW 155
                +  +P     L+W
Sbjct: 379 SVFPPSAHIPTILLSLIW 396

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 42/129 (32%)

Query: 183 GFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF------GSY 214
           G E  G I AVG  V+++  G   A                         F      G +
Sbjct: 58  GHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGF 117

Query: 215 AEFTMVPSKHILPVARPD---PEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGG 268
           AE+ +V  K++  +  P     E  A    +T GL    A   A     K V++  A  G
Sbjct: 118 AEYIVVKRKNVFAL--PTDMPIEDGAFIEPITVGLH---AFHLAQGCENKNVIIIGA--G 170

Query: 269 T-GQFAVQV 276
           T G  A+Q 
Sbjct: 171 TIGLLAIQC 179

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLCPEF 59
            +  G ++N+ S  G         YSA+K  +   +  L     P+   GI++ ++ P  
Sbjct: 127 ERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPF---GIKVLIVEPGA 183

Query: 60  VQTE 63
            +T 
Sbjct: 184 FRTN 187

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 45/148 (30%)

Query: 167 YFSDGNDIGS---RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------- 208
           Y+  G  I     + P   G EA G +  VG +V ++K G   A+               
Sbjct: 47  YYEHGR-IADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEG 105

Query: 209 -------MTF-------GSYAEFTMVPSKHILPVARPD---PEVVAM---LTSGLTASIA 248
                  +TF       G+ A + +  +     +  PD    E  A+   L+ G+    A
Sbjct: 106 KYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL--PDNVSLEEGALLEPLSVGVH---A 160

Query: 249 LEQAGPASGKKVLVTAAAGGTGQFAVQV 276
             +AG   G  VLV   AG  G  +V  
Sbjct: 161 CRRAGVQLGTTVLVI-GAGPIGLVSVLA 187

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 177 RLPFDAGFEAVGLIA-------AVGDSV--NNVKVGTPAAIMTFGSYAEFTMVPSKHI-- 225
             P   G +  G +          G  V      VG       +G  AE   V    +  
Sbjct: 56  HFPMIPGIDFAGTVHASEDPRFHAGQEVLLTGWGVGE----NHWGGLAERARVKGDWLVA 111

Query: 226 LPVARPDPEVVAMLTSGLTASI---ALEQAG-PASGKKVLVTAAAGGTGQFAVQVY 277
           LP        + + T+G TA +   ALE AG      +V+VT A+GG G  AV + 
Sbjct: 112 LPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALL 167

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 177 RLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHI--LP 227
             P   G +A G +        A GD V  +       +   G  +E+  VP   +  LP
Sbjct: 60  EYPLILGIDAAGTVVSSNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPGDWLVPLP 117

Query: 228 VARPDPEVVAMLTSGLTASI---ALEQAGPASGKK-VLVTAAAGGTGQFAVQVY 277
                 E +   T+G TA++    LEQ G +  K  VLVT A GG G  AV + 
Sbjct: 118 QNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSML 171

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 177 RLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHI--LP 227
             PF  G +  G++          GD V  +  G    +  FG Y+E+  +  + +  LP
Sbjct: 59  TYPFVPGIDLAGVVVSSQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWLVPLP 116

Query: 228 VARPDPEVVAMLTSGLTASIAL----EQAGPASGKKVLVTAAAGGTGQFAVQVY 277
                 E +A+ T+G TA++++    E         VLVT A GG G  AV + 
Sbjct: 117 KGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSML 170

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 243 LTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQV 276
           LTA  +L E    + G++VL+ +A GG G  AV +
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSI 58

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 31/143 (21%), Positives = 45/143 (31%), Gaps = 45/143 (31%)

Query: 175 GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-------------------------- 208
               P   G E  G+I  VG  V   K+G    +                          
Sbjct: 55  EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF 114

Query: 209 ------------MTFGSYAEFTMVPSKHILPVARPD---PEVVA-MLTSGLTASIALEQA 252
                          G Y+   +V   +++ V        E VA +L +G+T    L+ +
Sbjct: 115 TYDCLDSFHDNEPHMGGYSNNIVVDENYVISV--DKNAPLEKVAPLLCAGITTYSPLKFS 172

Query: 253 GPASGKKVLVTAAAGGTGQFAVQ 275
               G KV V A  GG G  AV+
Sbjct: 173 KVTKGTKVGV-AGFGGLGSMAVK 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.98
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.98
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.98
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.97
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.97
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.97
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.97
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.97
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.97
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.97
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.97
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.97
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.97
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.97
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.97
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.97
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.97
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.97
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.97
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.97
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.97
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.97
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.97
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.97
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.97
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.97
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.97
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.97
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.97
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.97
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.97
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.97
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.97
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.97
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.97
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.97
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.97
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.97
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.97
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.97
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.97
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.97
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.96
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.96
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.96
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.96
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.96
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.96
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.96
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.96
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.96
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.96
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.96
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.96
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.96
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.96
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.95
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.95
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.95
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.94
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.94
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.92
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.92
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.92
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.91
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.9
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.89
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.87
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.87
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.79
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.79
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.78
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.78
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.77
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.77
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.77
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.77
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.77
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.77
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.77
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.77
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.76
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.76
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.76
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.76
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.76
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.76
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.76
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.75
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.75
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.75
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.75
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.75
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.75
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.75
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.75
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.75
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.74
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.74
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.74
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.74
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.74
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.74
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.74
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.74
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.74
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.74
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.73
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.73
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.73
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.73
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.73
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.73
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.73
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.72
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.72
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.72
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.72
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.72
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.72
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.72
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.71
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.71
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.71
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.71
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.71
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.71
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.71
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.71
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.71
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.7
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.7
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.7
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.7
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.7
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.7
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.7
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.7
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.7
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.7
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.7
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.7
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.7
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.7
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.7
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.7
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.69
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.69
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.69
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.69
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.69
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.69
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.69
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.69
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.69
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.69
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.68
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.68
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.68
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.68
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.68
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.68
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.68
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.68
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.68
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.68
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.68
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.67
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.67
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.67
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.67
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.67
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.66
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.66
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.66
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.66
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.66
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.66
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.66
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.66
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.66
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.66
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.66
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.66
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.66
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.66
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.66
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.65
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.65
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.65
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.65
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.65
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.65
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.65
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.64
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.64
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.64
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.64
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.63
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.63
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.63
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.63
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.63
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.63
1spx_A	278	Short-chain reductase family member (5L265); paral	99.62
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.61
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.61
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.6
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.6
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.59
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.59
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.59
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.58
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.58
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.58
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.58
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.57
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.57
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.57
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.57
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.56
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.56
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.56
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.56
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.55
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.55
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.55
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.55
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.54
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.54
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.54
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.54
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.54
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.52
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.52
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.52
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.51
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.51
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.51
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.51
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.49
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.48
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.48
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.47
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.47
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.46
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.46
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.46
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.45
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.45
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.45
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.44
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.43
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.42
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.41
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.31
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.31
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.3
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.29
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.29
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.26
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.26
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.25
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.23
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.17
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.16
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.01
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.84
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.64
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.62
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.5
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.49
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.47
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.42
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.39
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.35
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.29
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.09
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.04
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.81
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.72
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.64
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.62
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.61
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.55
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.54
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	97.44
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.39
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	97.35
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.35
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.35
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.31
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.31
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.25
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.17
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	97.12
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.1
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.1
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.1
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.03
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.03
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.94
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	96.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	96.88
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.86
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	96.85
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.84
4f6c_A	427	AUSA reductase domain protein; thioester reductase	96.83
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.79
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	96.74
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	96.7
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.66
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	96.61
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.57
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.55
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.5
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.46
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.17
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.16
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.12
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	96.11
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	96.07
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	95.96
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.94
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.85
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	95.84
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.83
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.81
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.75
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.58
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.46
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.45
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	95.34
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.23
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	94.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.82
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	94.52
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	94.35
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	94.31
4f6l_B	508	AUSA reductase domain protein; thioester reductase	94.22
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	93.98
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	93.89
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	93.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	93.63
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	93.58
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	93.08
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	93.02
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	92.72
1g31_A	111	GP31; chaperone, CO-chaperonin, groes, in VIVO pro	92.5
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	92.27
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	92.0
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	91.21
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	90.89
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	90.13
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	89.98
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	89.73
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	89.28
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	83.78
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	83.54
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	81.92
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	80.98
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	80.06

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=6.1e-33  Score=244.62  Aligned_cols=139  Identities=19%  Similarity=0.247  Sum_probs=129.1

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~~  214 (282)
                      .++|.|+|+++||||||++ ++|++|.+...+.+. ...+|.++|||++|+|+++|++|++|++||||++..    +|+|
T Consensus        20 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~   98 (315)
T 3goh_A           20 NSVDIPALAADDILVQNQAIGINPVDWKFIKANPI-NWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSF   98 (315)
T ss_dssp             EEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT-CCCTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEECCTTSCCSS
T ss_pred             EecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC-cCCCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeCCCCCCccc
Confidence            4677889999999999999 999999998887653 357899999999999999999999999999999976    7999


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +||+++|++.++++|+  +++++|+++++++|||++++++++++||+|||+|+ |++|++++|+||++
T Consensus        99 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~  165 (315)
T 3goh_A           99 AEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNA  165 (315)
T ss_dssp             BSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             ccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9999999999999999  78888899999999999998888999999999999 99999999999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.98  E-value=3.1e-32  Score=240.78  Aligned_cols=141  Identities=26%  Similarity=0.338  Sum_probs=128.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC----CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN----DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----  210 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|..    .....+|.++|||++|+|+++|++|++|++||||++..    
T Consensus        24 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~  103 (321)
T 3tqh_A           24 VDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPD  103 (321)
T ss_dssp             EEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECSTTT
T ss_pred             EecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCC
Confidence            4567889999999999999 99999998887621    12457899999999999999999999999999999874    


Q ss_pred             -CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          211 -FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 -~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                       .|+|+||+++|++.++++|+  +++++|+++++++|||++++++++++||+|||+||+|++|++++|+||++
T Consensus       104 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~  176 (321)
T 3tqh_A          104 HPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK  176 (321)
T ss_dssp             CCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             CCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence             59999999999999999999  78999999999999999998899999999999998899999999999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.98  E-value=2.4e-32  Score=244.92  Aligned_cols=141  Identities=20%  Similarity=0.244  Sum_probs=128.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae  216 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++|++|++|++||||++..  .|+|+|
T Consensus        45 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae  124 (357)
T 1zsy_A           45 KNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRT  124 (357)
T ss_dssp             EEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSSCSCCSBS
T ss_pred             eeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCCCCcccee
Confidence            4567888999999999999 9999999988876544345799999999999999999999999999999874  599999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|+++++++|||+++.+ +++++||+|||+|++|++|++++|+||++
T Consensus       125 y~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~  191 (357)
T 1zsy_A          125 EAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAAL  191 (357)
T ss_dssp             EEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHH
T ss_pred             EEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHc
Confidence            99999999999999  788999999999999999954 78899999999999999999999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.98  E-value=3.1e-32  Score=242.84  Aligned_cols=140  Identities=24%  Similarity=0.335  Sum_probs=130.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~  217 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|.+.....+|.++|||++|+|+++|++|+ |++||||++.. .|+|+||
T Consensus        39 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey  117 (342)
T 4eye_A           39 TDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAER  117 (342)
T ss_dssp             EEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEECSSCCSBSE
T ss_pred             EeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-CCCCCEEEEecCCCcceEE
Confidence            4667899999999999999 9999999998887655567899999999999999999999 99999999875 7999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++.++++|+  +++++|+++++++|||+++ +++++++|++|||+|++|++|++++|+|+++
T Consensus       118 ~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~  183 (342)
T 4eye_A          118 VAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM  183 (342)
T ss_dssp             EEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             EEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence            9999999999999  7889999999999999999 7788899999999999999999999999975

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.97  E-value=5.8e-32  Score=242.03  Aligned_cols=141  Identities=23%  Similarity=0.266  Sum_probs=130.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~  217 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|.+..+..+|.++|||++|+|+++|++|++|++||||++.. .|+|+||
T Consensus        46 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey  125 (353)
T 4dup_A           46 GKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEY  125 (353)
T ss_dssp             EEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSE
T ss_pred             EeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCCCCCEEEEecCCCceeeE
Confidence            4667889999999999999 9999999998887665567899999999999999999999999999999864 6999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++.++++|+  +++++|+++++++|||+++ +++++++|++|||+||+|++|++++|+|+++
T Consensus       126 ~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~  191 (353)
T 4dup_A          126 CLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAF  191 (353)
T ss_dssp             EEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             EEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence            9999999999999  7889999999999999999 7789999999999999999999999999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.97  E-value=4.7e-32  Score=242.28  Aligned_cols=141  Identities=26%  Similarity=0.372  Sum_probs=130.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~  217 (282)
                      .+++.|+|+++||||||++ ++|++|.+...|.+.....+|+++|||++|+|+++|++|++|++||||++.. +|+|+||
T Consensus        21 ~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~G~~aey  100 (349)
T 4a27_A           21 FRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEV  100 (349)
T ss_dssp             EEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSE
T ss_pred             EecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCCCCCEEEEecCCCcceEE
Confidence            4567889999999999999 9999999998887665668899999999999999999999999999999875 6999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++.++++|+  +++++|+++++++|||+++ +.+++++||+|||+|++|++|++++|+||++
T Consensus       101 ~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~  166 (349)
T 4a27_A          101 VCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTV  166 (349)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTS
T ss_pred             EEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence            9999999999999  7889999999999999999 6688899999999999999999999999976

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.97  E-value=9.5e-32  Score=239.44  Aligned_cols=141  Identities=20%  Similarity=0.254  Sum_probs=130.4

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-cCCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-TFGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~G~~ae~  217 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++|++|++|++||||+.. ..|+|+||
T Consensus        23 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey  102 (340)
T 3gms_A           23 EYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEY  102 (340)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECSSSCSSBSE
T ss_pred             EecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecCCCccceeE
Confidence            4567889999999999999 999999999888765556889999999999999999999999999999987 47999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++.++++|+  +++++|++++.++|||+++ +++++++|++|||+|++|++|++++|+|+++
T Consensus       103 ~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~  168 (340)
T 3gms_A          103 VKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL  168 (340)
T ss_dssp             EEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH
T ss_pred             EEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc
Confidence            9999999999999  7889999999999999998 7788999999999999889999999999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.97  E-value=1.8e-31  Score=236.27  Aligned_cols=140  Identities=29%  Similarity=0.411  Sum_probs=128.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae  216 (282)
                      .+++.|+|+++||||||++ ++|++|.+...|.+.. ..+|.++|||++|+|+++|++|++|++||||++..  .|+|+|
T Consensus        19 ~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~ae   97 (325)
T 3jyn_A           19 VDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSE   97 (325)
T ss_dssp             EEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSSSSCCSBS
T ss_pred             eecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecCCCccccc
Confidence            4667889999999999999 9999999988886543 46899999999999999999999999999999875  799999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|++++.++|||+++ +.+++++|++|||+|++|++|++++|+|+++
T Consensus        98 y~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~  164 (325)
T 3jyn_A           98 VHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKAL  164 (325)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH
T ss_pred             eEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC
Confidence            99999999999999  7899999999999999999 4578899999999999899999999999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.97  E-value=2e-31  Score=237.40  Aligned_cols=141  Identities=24%  Similarity=0.321  Sum_probs=129.2

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+...+.+.....+|.++|||++|+|+++|++|++|++||||.+.        
T Consensus        17 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~   96 (340)
T 3s2e_A           17 IDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGY   96 (340)
T ss_dssp             EEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSS
T ss_pred             EEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCC
Confidence            35677899999999999999 999999999888765556789999999999999999999999999999532        


Q ss_pred             ---------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          210 ---------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                           ..|+|+||+++|++.++++|+  +++++|++++++.|||+++++.++++||+|||+|+ 
T Consensus        97 C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-  175 (340)
T 3s2e_A           97 CEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGI-  175 (340)
T ss_dssp             SHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECC-
T ss_pred             ChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECC-
Confidence                                 259999999999999999999  78999999999999999998889999999999997 


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      |++|++++|+||++
T Consensus       176 G~vG~~a~qla~~~  189 (340)
T 3s2e_A          176 GGLGHVAVQYARAM  189 (340)
T ss_dssp             STTHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHC
Confidence            99999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.97  E-value=1.1e-31  Score=239.33  Aligned_cols=153  Identities=21%  Similarity=0.236  Sum_probs=134.1

Q ss_pred             cCCccccCCCC---CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC-CCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          128 SGSMKRSSSQV---PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI-GSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       128 ~~~~~~~~~~~---~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      |++........   ..++|.|.|+++||||||++ ++|++|.+.+.+.... ...+|.++|||++|+|+++|++|++|++
T Consensus         8 mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   87 (343)
T 3gaz_A            8 MIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRV   87 (343)
T ss_dssp             EEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             heEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCCCC
Confidence            34444443333   35677899999999999999 9999999888775432 2578999999999999999999999999


Q ss_pred             CCeeEEcc------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHH
Q 023465          203 GTPAAIMT------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFA  273 (282)
Q Consensus       203 Gd~V~~~~------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a  273 (282)
                      ||||++..      +|+|+||+++|++.++++|+  +++++|+++++++|||+++ +++++++|++|||+||+|++|+++
T Consensus        88 GdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~  167 (343)
T 3gaz_A           88 GDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVA  167 (343)
T ss_dssp             TCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHH
T ss_pred             CCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHH
Confidence            99999874      69999999999999999999  7899999999999999999 888999999999999889999999


Q ss_pred             HHHHHHh
Q 023465          274 VQVYFQI  280 (282)
Q Consensus       274 ~q~a~~~  280 (282)
                      +|+|+++
T Consensus       168 ~q~a~~~  174 (343)
T 3gaz_A          168 IQIALAR  174 (343)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHC
Confidence            9999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.5e-31  Score=239.10  Aligned_cols=141  Identities=26%  Similarity=0.331  Sum_probs=129.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae  216 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|.+.....+|.++|||++|+|+++|++|++|++||||++..  .|+|||
T Consensus        48 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae  127 (351)
T 1yb5_A           48 SDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAE  127 (351)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBS
T ss_pred             eecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCCCCCccee
Confidence            3567888999999999999 9999999888876543456899999999999999999999999999999876  599999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|+++++++|||+++. .+++++|++|||+|++|++|++++|+|+.+
T Consensus       128 y~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~  194 (351)
T 1yb5_A          128 YALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY  194 (351)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHT
T ss_pred             EEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHC
Confidence            99999999999999  78888999999999999995 788999999999999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.97  E-value=9.5e-32  Score=241.52  Aligned_cols=142  Identities=21%  Similarity=0.353  Sum_probs=129.9

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ...++|.|+|+++||||||++ ++|++|.+.+.+.+.....+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        42 ~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~  121 (363)
T 3uog_A           42 KLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLD  121 (363)
T ss_dssp             EEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSTTCCS
T ss_pred             EEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCCCCCEEEEeccccccc
Confidence            335677899999999999999 999999999888765456789999999999999999999999999999986       


Q ss_pred             ------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCch
Q 023465          210 ------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGG  268 (282)
Q Consensus       210 ------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~  268 (282)
                                        .+|+|+||+++|++.++++|+  +++++|+++++++|||+++ +++++++|++|||+| +|+
T Consensus       122 g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~  200 (363)
T 3uog_A          122 GLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGG  200 (363)
T ss_dssp             SSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBH
T ss_pred             cccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCH
Confidence                              249999999999999999999  7899999999999999999 788999999999999 599


Q ss_pred             HHHHHHHHHHHh
Q 023465          269 TGQFAVQVYFQI  280 (282)
Q Consensus       269 vG~~a~q~a~~~  280 (282)
                      +|++++|+||++
T Consensus       201 vG~~a~qla~~~  212 (363)
T 3uog_A          201 VALFGLQIAKAT  212 (363)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc
Confidence            999999999975

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.97  E-value=2.3e-31  Score=237.74  Aligned_cols=140  Identities=24%  Similarity=0.351  Sum_probs=128.3

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccC------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------  211 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------  211 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++.+.      
T Consensus        19 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~   97 (348)
T 3two_A           19 PHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK-EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKA   97 (348)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSS-CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSC
T ss_pred             EEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCC-CCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCC
Confidence            35677899999999999999 999999999887653 3578999999999999999999999999999986321      


Q ss_pred             --------------------------------CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCC
Q 023465          212 --------------------------------GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASG  257 (282)
Q Consensus       212 --------------------------------G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g  257 (282)
                                                      |+||||+++|++.++++|+  +++++|++++++.|||+++++.++++|
T Consensus        98 C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g  177 (348)
T 3two_A           98 CKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKG  177 (348)
T ss_dssp             SHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCCTT
T ss_pred             ChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCC
Confidence                                            9999999999999999999  789999999999999999998899999


Q ss_pred             CEEEEeCCCchHHHHHHHHHHHh
Q 023465          258 KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       258 ~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|||+|+ |++|++++|+||++
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~  199 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAM  199 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHT
T ss_pred             CEEEEECC-cHHHHHHHHHHHHC
Confidence            99999998 99999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.7e-31  Score=239.48  Aligned_cols=141  Identities=23%  Similarity=0.401  Sum_probs=126.6

Q ss_pred             CccccCCC-CCCCcEEEEEEc-cccccccccccCCCC--CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-----
Q 023465          139 PLNLNVQL-PESFEKLLWIYG-QVNFSSGRYFSDGND--IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----  209 (282)
Q Consensus       139 ~~~~~~p~-~~~~~vlv~v~~-~~~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----  209 (282)
                      ..++|.|+ |+++||||||++ ++|++|.+...|.+.  ....+|.++|||++|+|+++|++|++|++||||++.     
T Consensus        30 ~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~C  109 (359)
T 1h2b_A           30 IEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTD  109 (359)
T ss_dssp             EECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCC
T ss_pred             EEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCC
Confidence            35677888 999999999999 999999998887542  134679999999999999999999999999999865     


Q ss_pred             -----------------------cCCccccEEeecCCCeeeCCC--ChHHHH---HhhhHHHHHHHHHHH--hCCCCCCE
Q 023465          210 -----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVV---AMLTSGLTASIALEQ--AGPASGKK  259 (282)
Q Consensus       210 -----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a---~l~~~~~ta~~~l~~--~~~~~g~~  259 (282)
                                             ..|+|+||+++|++.++++|+  +++++|   ++++++.|||+++++  +++++||+
T Consensus       110 g~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~  189 (359)
T 1h2b_A          110 GTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAY  189 (359)
T ss_dssp             SCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCE
T ss_pred             CCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCE
Confidence                                   259999999999999999999  788888   788999999999977  89999999


Q ss_pred             EEEeCCCchHHHHHHHHHHHh
Q 023465          260 VLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       260 vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |||+|+ |++|++++|+||++
T Consensus       190 VlV~Ga-G~vG~~avqlak~~  209 (359)
T 1h2b_A          190 VAIVGV-GGLGHIAVQLLKVM  209 (359)
T ss_dssp             EEEECC-SHHHHHHHHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHHc
Confidence            999999 99999999999986

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.97  E-value=2.9e-31  Score=236.83  Aligned_cols=141  Identities=21%  Similarity=0.279  Sum_probs=129.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|+|+|+||||||||++ ++|++|++++.|.+  +.++|.++|||++|+|+++|++|++|++||||++.+       
T Consensus        16 l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~--~~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~   93 (348)
T 4eez_A           16 LVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDF--GNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGH   93 (348)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTT--CCCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSS
T ss_pred             EEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCC--CCCCCcccceeEEEEEEEECceeeecccCCeEeecccccccCc
Confidence            35678899999999999999 99999999988764  457899999999999999999999999999998641       


Q ss_pred             ----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          211 ----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                            .|+|+||+++|++.++++|+  +++++|++++++.|||++++.+++++||+|||+|+ 
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-  172 (348)
T 4eez_A           94 CEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGA-  172 (348)
T ss_dssp             SHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECC-
T ss_pred             cccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcC-
Confidence                                  39999999999999999999  79999999999999999999999999999999998 


Q ss_pred             chHHHHHHHHHHHhhC
Q 023465          267 GGTGQFAVQVYFQIQG  282 (282)
Q Consensus       267 g~vG~~a~q~a~~~~~  282 (282)
                      |++|++++|+|+++.|
T Consensus       173 G~~g~~a~~~a~~~~g  188 (348)
T 4eez_A          173 GGLGNLAIQYAKNVFG  188 (348)
T ss_dssp             SHHHHHHHHHHHHTSC
T ss_pred             CCccHHHHHHHHHhCC
Confidence            9999999999998754

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.97  E-value=1.6e-31  Score=239.97  Aligned_cols=141  Identities=43%  Similarity=0.573  Sum_probs=128.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC-CCCCCCeeEEccCCccccE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEF  217 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~G~~ae~  217 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|+++|||++|+|+++|++|+ +|++||||++...|+||||
T Consensus        44 ~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey  123 (362)
T 2c0c_A           44 RDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEY  123 (362)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEECSCCSBSE
T ss_pred             eecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEccCCcceeE
Confidence            5677889999999999999 9999999988876543456899999999999999999999 9999999999888999999


Q ss_pred             EeecCCCeeeCCCChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          218 TMVPSKHILPVARPDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       218 ~~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++|++.++++|+...++|+++++++|||+++ +.+++++|++|||+||+|++|++++|+|+++
T Consensus       124 ~~v~~~~~~~~P~~~~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~  187 (362)
T 2c0c_A          124 TVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA  187 (362)
T ss_dssp             EEEEGGGCEECSSSCHHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHT
T ss_pred             EEEcHHHeEECCCCchHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC
Confidence            99999999999995467889999999999999 5578899999999999899999999999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.97  E-value=2.2e-31  Score=238.34  Aligned_cols=141  Identities=23%  Similarity=0.237  Sum_probs=128.0

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCC-CCCCCCCeeEEcc-CCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV-NNVKVGTPAAIMT-FGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~-~G~~ae  216 (282)
                      .+++.|.|+++||||||++ ++|++|.+...|.+.....+|.++|||++|+|+++|++| ++|++||||++.. .|+|+|
T Consensus        40 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~~~G~~ae  119 (354)
T 2j8z_A           40 KEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ  119 (354)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEECSSCCSBS
T ss_pred             eecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCCCCCCCEEEEecCCCccee
Confidence            4567888999999999999 999999998887655444679999999999999999999 9999999999874 599999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|+++++++|||+++ +.+++++|++|||+||+|++|++++|+|+..
T Consensus       120 y~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  186 (354)
T 2j8z_A          120 YVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA  186 (354)
T ss_dssp             EEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             EEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence            99999999999999  7888899999999999999 6788999999999999999999999999974

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.97  E-value=1.4e-31  Score=240.31  Aligned_cols=141  Identities=23%  Similarity=0.266  Sum_probs=127.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G~~  214 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++..    .|+|
T Consensus        43 ~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~  121 (363)
T 4dvj_A           43 IELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPP-DGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTN  121 (363)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSC
T ss_pred             eecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCC-CCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCccc
Confidence            4677889999999999999 999999998887643 257899999999999999999999999999999864    6999


Q ss_pred             ccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCC-----CCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          215 AEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPA-----SGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~-----~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      +||+++|++.++++|+  +++++|+++++++|||+++ +.++++     +|++|||+||+|++|++++|+||++.
T Consensus       122 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~  196 (363)
T 4dvj_A          122 AEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT  196 (363)
T ss_dssp             BSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHC
T ss_pred             eEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhc
Confidence            9999999999999999  7899999999999999999 667777     89999999988999999999999753

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.97  E-value=3.8e-31  Score=235.01  Aligned_cols=139  Identities=25%  Similarity=0.270  Sum_probs=127.8

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFT  218 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~  218 (282)
                      .+++.|+|+++||||||++ ++|++|.++..|.+.  .++|+++|||++|+|+++|++|++|++||||++...|+|+||+
T Consensus        26 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~  103 (334)
T 3qwb_A           26 EDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYS  103 (334)
T ss_dssp             EEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEECSSCSBSEE
T ss_pred             EeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccceEEEEEEECCCCCCCCCCCEEEEeeCCcceEEE
Confidence            4667889999999999999 999999988887643  4689999999999999999999999999999999899999999


Q ss_pred             eec-CCCeeeCCC--ChHH---HHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVP-SKHILPVAR--PDPE---VVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~-~~~~~~~p~--~~~~---~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++| ++.++++|+  ++++   ++++++++.|||+++.+ .++++|++|||+||+|++|++++|+|+++
T Consensus       104 ~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~  172 (334)
T 3qwb_A          104 KISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMK  172 (334)
T ss_dssp             EEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHT
T ss_pred             EecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHC
Confidence            999 999999999  7788   78899999999999954 58899999999998899999999999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.3e-31  Score=236.61  Aligned_cols=141  Identities=25%  Similarity=0.371  Sum_probs=128.5

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------  209 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.|.++....+|.++|||++|+|+++|++|++|++||||++.         
T Consensus        21 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C  100 (347)
T 2hcy_A           21 KDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMAC  100 (347)
T ss_dssp             EEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSS
T ss_pred             EEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCC
Confidence            4677889999999999999 999999998887654345689999999999999999999999999999863         


Q ss_pred             --------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCc
Q 023465          210 --------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAG  267 (282)
Q Consensus       210 --------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g  267 (282)
                                          ..|+|+||+++|++.++++|+  +++++|++++++.|||+++++.++++|++|||+|++|
T Consensus       101 ~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~g  180 (347)
T 2hcy_A          101 EYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAG  180 (347)
T ss_dssp             TTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTTTCCTTCEEEEETTTS
T ss_pred             hhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence                                159999999999999999999  7888999999999999999888899999999999999


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+.+
T Consensus       181 giG~~~~~~a~~~  193 (347)
T 2hcy_A          181 GLGSLAVQYAKAM  193 (347)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHC
Confidence            9999999999965

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.97  E-value=7e-31  Score=233.78  Aligned_cols=141  Identities=25%  Similarity=0.335  Sum_probs=127.9

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++|++|++|++||||++.        
T Consensus        15 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~   94 (339)
T 1rjw_A           15 IKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGH   94 (339)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSC
T ss_pred             EEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCC
Confidence            34677888999999999999 999999988887654345689999999999999999999999999999863        


Q ss_pred             ---------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          210 ---------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                           ..|+|+||+++|++.++++|+  +++++|++++++.|||+++++.++++|++|||+|+ 
T Consensus        95 C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-  173 (339)
T 1rjw_A           95 CDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGI-  173 (339)
T ss_dssp             SHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECC-
T ss_pred             CchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECC-
Confidence                                 259999999999999999999  78889999999999999998889999999999999 


Q ss_pred             chHHHHHHHHHHHh
Q 023465          267 GGTGQFAVQVYFQI  280 (282)
Q Consensus       267 g~vG~~a~q~a~~~  280 (282)
                      |++|++++|+|+++
T Consensus       174 G~vG~~~~~~a~~~  187 (339)
T 1rjw_A          174 GGLGHVAVQYAKAM  187 (339)
T ss_dssp             STTHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHc
Confidence            89999999999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.2e-30  Score=231.05  Aligned_cols=140  Identities=23%  Similarity=0.267  Sum_probs=126.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--cCCcccc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--TFGSYAE  216 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--~~G~~ae  216 (282)
                      .+++.|.|+++||||||++ ++|++|.+...|.+. ...+|.++|||++|+|+++|++|++|++||||...  ..|+|+|
T Consensus        19 ~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~g~~~G~~ae   97 (327)
T 1qor_A           19 VEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSS   97 (327)
T ss_dssp             EECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBS
T ss_pred             eccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCceeEEEEEEECCCCCCCCCCCEEEECCCCCceeee
Confidence            4567788999999999999 999999998887653 34589999999999999999999999999999543  3599999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|+++++++|||+++. .+++++|++|||+|++|++|++++|+|+..
T Consensus        98 y~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  164 (327)
T 1qor_A           98 VHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL  164 (327)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHH
T ss_pred             EEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence            99999999999999  78888999999999999995 788999999999999999999999999875

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.97  E-value=6.2e-31  Score=237.44  Aligned_cols=151  Identities=17%  Similarity=0.190  Sum_probs=131.8

Q ss_pred             cCCccccCCCC---CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCC
Q 023465          128 SGSMKRSSSQV---PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG  203 (282)
Q Consensus       128 ~~~~~~~~~~~---~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  203 (282)
                      +++........   ..++|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++|
T Consensus         9 mkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~~vG~~v~~~~vG   87 (378)
T 3uko_A            9 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQAG   87 (378)
T ss_dssp             EEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCccceEEEEEeCCCCCcCCCC
Confidence            44444444433   35677899999999999999 999999998887643 45789999999999999999999999999


Q ss_pred             CeeEEccC--------------------------------------------------CccccEEeecCCCeeeCCC--C
Q 023465          204 TPAAIMTF--------------------------------------------------GSYAEFTMVPSKHILPVAR--P  231 (282)
Q Consensus       204 d~V~~~~~--------------------------------------------------G~~ae~~~v~~~~~~~~p~--~  231 (282)
                      |||++...                                                  |+|+||+++|++.++++|+  +
T Consensus        88 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  167 (378)
T 3uko_A           88 DHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAP  167 (378)
T ss_dssp             CEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSC
T ss_pred             CEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCCCC
Confidence            99986532                                                  6999999999999999999  7


Q ss_pred             hHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          232 DPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       232 ~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++++|.+++++.|||+++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~  216 (378)
T 3uko_A          168 LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTA  216 (378)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            899999999999999998 6788999999999998 99999999999975

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.97  E-value=4.5e-31  Score=237.69  Aligned_cols=156  Identities=17%  Similarity=0.217  Sum_probs=131.5

Q ss_pred             hhhhhhccCCccccCCC--CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCC
Q 023465          121 AKYLVRSSGSMKRSSSQ--VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV  197 (282)
Q Consensus       121 ~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v  197 (282)
                      ...+..+|++..+....  ...++|.|+|+++||||||++ ++|++|.+.+.|.+  +..+|.++|||++|+|+++|++|
T Consensus        17 ~~~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~--~~~~p~v~G~e~~G~V~~vG~~v   94 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF--PSTPPVTLGHEFCGIVVEAGSAV   94 (370)
T ss_dssp             ----CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS--CCCSSEECCCSEEEEEEEECTTC
T ss_pred             ccccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC--CCCCCeecCcceEEEEEEECCCC
Confidence            34444455554444332  235677899999999999999 99999999888764  45789999999999999999999


Q ss_pred             CCCCCCCeeEEc----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          198 NNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       198 ~~~~~Gd~V~~~----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                      ++|++||||++.                            ..|+|+||+++|++.++++|+  +++++| ++++++|||+
T Consensus        95 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~  173 (370)
T 4ej6_A           95 RDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLH  173 (370)
T ss_dssp             CSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHH
Confidence            999999999873                            259999999999999999999  566654 8899999999


Q ss_pred             HHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 ALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++++++++||+|||+|+ |++|++++|+||++
T Consensus       174 ~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~  205 (370)
T 4ej6_A          174 GVDLSGIKAGSTVAILGG-GVIGLLTVQLARLA  205 (370)
T ss_dssp             HHHHHTCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            999999999999999998 99999999999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.97  E-value=8.2e-31  Score=233.81  Aligned_cols=142  Identities=24%  Similarity=0.390  Sum_probs=128.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCC-CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND-IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+. .+..+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        15 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~   94 (345)
T 3jv7_A           15 VVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGA   94 (345)
T ss_dssp             EEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSS
T ss_pred             EEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCC
Confidence            35677889999999999999 999999998887643 235789999999999999999999999999999974       


Q ss_pred             --------------------------cCCccccEEeec-CCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHh--CCCCCCE
Q 023465          210 --------------------------TFGSYAEFTMVP-SKHILPVAR-PDPEVVAMLTSGLTASIALEQA--GPASGKK  259 (282)
Q Consensus       210 --------------------------~~G~~ae~~~v~-~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~--~~~~g~~  259 (282)
                                                .+|+|+||+++| ++.++++|+ +++++|+++++++|||+++++.  .+++||+
T Consensus        95 C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~  174 (345)
T 3jv7_A           95 CHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGST  174 (345)
T ss_dssp             SHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTTCCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCE
T ss_pred             ChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCCCCHHHhhhhhhhHHHHHHHHHHhccCCCCCCE
Confidence                                      269999999999 899999999 8999999999999999999775  7899999


Q ss_pred             EEEeCCCchHHHHHHHHHHHhh
Q 023465          260 VLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       260 vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      |||+|+ |++|++++|+||++.
T Consensus       175 vlv~Ga-G~vG~~a~qla~~~g  195 (345)
T 3jv7_A          175 AVVIGV-GGLGHVGIQILRAVS  195 (345)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHC
T ss_pred             EEEECC-CHHHHHHHHHHHHcC
Confidence            999998 999999999999873

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.97  E-value=7.8e-31  Score=233.81  Aligned_cols=141  Identities=26%  Similarity=0.303  Sum_probs=127.1

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEE----------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------  208 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----------  208 (282)
                      .+++.|.|+++||||||++ ++|++|.+...+.+.....+|.++|||++|+|+++|++|++|++||||++          
T Consensus        18 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~   97 (343)
T 2eih_A           18 ADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCE   97 (343)
T ss_dssp             EECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSH
T ss_pred             EecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccch
Confidence            4667788999999999999 99999999888765433468999999999999999999999999999993          


Q ss_pred             -----------------c-cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEeCCCc
Q 023465          209 -----------------M-TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQ-AGPASGKKVLVTAAAG  267 (282)
Q Consensus       209 -----------------~-~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~ga~g  267 (282)
                                       . ..|+|+||+++|++.++++|+  +++++|+++++++|||+++++ +++++|++|||+|++|
T Consensus        98 ~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg  177 (343)
T 2eih_A           98 RCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS  177 (343)
T ss_dssp             HHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTS
T ss_pred             hhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence                             1 249999999999999999999  788888899999999999966 6889999999999999


Q ss_pred             hHHHHHHHHHHHh
Q 023465          268 GTGQFAVQVYFQI  280 (282)
Q Consensus       268 ~vG~~a~q~a~~~  280 (282)
                      ++|++++|+|+++
T Consensus       178 ~iG~~~~~~a~~~  190 (343)
T 2eih_A          178 GVSVAAIQIAKLF  190 (343)
T ss_dssp             TTHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHC
Confidence            9999999999975

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.97  E-value=2.3e-30  Score=232.29  Aligned_cols=141  Identities=23%  Similarity=0.339  Sum_probs=127.1

Q ss_pred             CCcc--ccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC-CCCCCCeeEEc----
Q 023465          138 VPLN--LNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIM----  209 (282)
Q Consensus       138 ~~~~--~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~----  209 (282)
                      ...+  +|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|+ +|++||||++.    
T Consensus        20 ~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~   98 (360)
T 1piw_A           20 NPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVF   98 (360)
T ss_dssp             SCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEE
T ss_pred             eEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC-CCCCCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCC
Confidence            3456  78889999999999999 999999998887643 246799999999999999999999 99999999531    


Q ss_pred             --------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCC
Q 023465          210 --------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA  255 (282)
Q Consensus       210 --------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~  255 (282)
                                                      ..|+|+||+++|++.++++|+  +++++|++++++.|||+++++++++
T Consensus        99 ~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (360)
T 1piw_A           99 SCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG  178 (360)
T ss_dssp             CCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCS
T ss_pred             CCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHcCCC
Confidence                                            249999999999999999999  7888999999999999999889999


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|||+|+ |++|++++|+||++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~  202 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAM  202 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC
Confidence            9999999999 99999999999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.97  E-value=7e-31  Score=233.17  Aligned_cols=141  Identities=24%  Similarity=0.353  Sum_probs=124.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC-CCC-CCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCcc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN-DIG-SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSY  214 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~-~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~  214 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|.+ ... ..+|.++|||++|+|+++|++|++|++||||++..  .|+|
T Consensus        19 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~   98 (333)
T 1wly_A           19 EEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAY   98 (333)
T ss_dssp             EECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSSSCCCS
T ss_pred             EeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCCCCCCCEEEEecCCCCcc
Confidence            4567788999999999999 99999999887754 111 45799999999999999999999999999998875  7999


Q ss_pred             ccEEeecCCCeeeCCC--ChHH--HHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          215 AEFTMVPSKHILPVAR--PDPE--VVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       215 ae~~~v~~~~~~~~p~--~~~~--~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +||+++|++.++++|+  ++++  +|+++++++|||+++. .+++++|++|||+|++|++|++++|+|+.+
T Consensus        99 aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  169 (333)
T 1wly_A           99 SQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL  169 (333)
T ss_dssp             BSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHT
T ss_pred             eeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHC
Confidence            9999999999999999  7788  8999999999999995 678899999999999999999999999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.97  E-value=1.6e-30  Score=234.49  Aligned_cols=141  Identities=24%  Similarity=0.333  Sum_probs=125.6

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccCCCC--------------CCCCCCCcccCCceEEEEEeCCCCCCCCCC
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGND--------------IGSRLPFDAGFEAVGLIAAVGDSVNNVKVG  203 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~--------------~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  203 (282)
                      .++|.|.| +++||||||++ ++|++|.+...|.+.              ....+|.++|||++|+|+++|++|++|++|
T Consensus        40 ~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E~~G~V~~vG~~V~~~~vG  119 (375)
T 2vn8_A           40 QNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPG  119 (375)
T ss_dssp             EEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             ccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccceeeeEEEEEeCCCCCCCCCC
Confidence            45667874 89999999999 999999988776421              112389999999999999999999999999


Q ss_pred             CeeEEcc----CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhC----CCCCCEEEEeCCCchHHHH
Q 023465          204 TPAAIMT----FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAG----PASGKKVLVTAAAGGTGQF  272 (282)
Q Consensus       204 d~V~~~~----~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~----~~~g~~vli~ga~g~vG~~  272 (282)
                      |||++..    .|+||||+++|++.++++|+  +++++|+++++++|||+++ +.++    +++|++|||+||+|++|++
T Consensus       120 DrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~  199 (375)
T 2vn8_A          120 DEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTF  199 (375)
T ss_dssp             CEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHH
T ss_pred             CEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHH
Confidence            9999864    69999999999999999999  7889999999999999999 5788    8999999999988999999


Q ss_pred             HHHHHHHh
Q 023465          273 AVQVYFQI  280 (282)
Q Consensus       273 a~q~a~~~  280 (282)
                      ++|+|+++
T Consensus       200 ~~qla~~~  207 (375)
T 2vn8_A          200 AIQVMKAW  207 (375)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhC
Confidence            99999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.97  E-value=9.1e-31  Score=235.13  Aligned_cols=141  Identities=15%  Similarity=0.168  Sum_probs=125.4

Q ss_pred             ccccCCCCC--CCcEEEEEEc-cccccccccccCCCCCCCCCC---------CcccCCceEEEEEeCCCCCCCCCCCeeE
Q 023465          140 LNLNVQLPE--SFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLP---------FDAGFEAVGLIAAVGDSVNNVKVGTPAA  207 (282)
Q Consensus       140 ~~~~~p~~~--~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p---------~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  207 (282)
                      .+++.|.|+  ++||||||++ ++|++|.+.+.|.+.....+|         .++|||++|+|+++|++|++|++||||+
T Consensus        22 ~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~V~~vG~~v~~~~vGdrV~  101 (364)
T 1gu7_A           22 QSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVI  101 (364)
T ss_dssp             EEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEE
T ss_pred             eeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEEEEEeCCCCCcCCCCCEEE
Confidence            355667776  9999999999 999999998887654333556         8999999999999999999999999999


Q ss_pred             Ec--cCCccccEEeecCCCeeeCCC-------------ChHHHHHhhhHHHHHHHHHHH-hCCCCC-CEEEEeCCCchHH
Q 023465          208 IM--TFGSYAEFTMVPSKHILPVAR-------------PDPEVVAMLTSGLTASIALEQ-AGPASG-KKVLVTAAAGGTG  270 (282)
Q Consensus       208 ~~--~~G~~ae~~~v~~~~~~~~p~-------------~~~~~a~l~~~~~ta~~~l~~-~~~~~g-~~vli~ga~g~vG  270 (282)
                      +.  ..|+|+||+++|++.++++|+             +++++|++.++++|||+++++ +++++| |+|||+|++|++|
T Consensus       102 ~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG  181 (364)
T 1gu7_A          102 PSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG  181 (364)
T ss_dssp             ESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHH
T ss_pred             ecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHH
Confidence            87  469999999999999999994             678888899999999999976 588999 9999999999999


Q ss_pred             HHHHHHHHHh
Q 023465          271 QFAVQVYFQI  280 (282)
Q Consensus       271 ~~a~q~a~~~  280 (282)
                      ++++|+||++
T Consensus       182 ~~aiqlak~~  191 (364)
T 1gu7_A          182 KYASQIGKLL  191 (364)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHC
Confidence            9999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.97  E-value=1.8e-30  Score=231.81  Aligned_cols=140  Identities=26%  Similarity=0.385  Sum_probs=127.7

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----CC
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FG  212 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~G  212 (282)
                      ...++|.|+|+++||||||++ ++|++|.+...+.   ...+|.++|||++|+|+++|++|++|++||||++..    .|
T Consensus        21 ~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G   97 (346)
T 3fbg_A           21 KTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNG   97 (346)
T ss_dssp             EEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCC
T ss_pred             EeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcCCCCCCc
Confidence            345677899999999999999 9999999887765   357899999999999999999999999999999864    69


Q ss_pred             ccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCC------CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          213 SYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPA------SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       213 ~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~------~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+||+++|++.++++|+  +++++|++++++.|||+++ +.++++      +|++|||+||+|++|++++|+|+++
T Consensus        98 ~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~  174 (346)
T 3fbg_A           98 SNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY  174 (346)
T ss_dssp             SSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHT
T ss_pred             ceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence            999999999999999999  7899999999999999999 677887      9999999988899999999999965

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.97  E-value=2.3e-30  Score=232.51  Aligned_cols=140  Identities=19%  Similarity=0.169  Sum_probs=124.6

Q ss_pred             CccccCC--------CCCCCcEEEEEEc-cccccccccccCC--CCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeE
Q 023465          139 PLNLNVQ--------LPESFEKLLWIYG-QVNFSSGRYFSDG--NDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  207 (282)
Q Consensus       139 ~~~~~~p--------~~~~~~vlv~v~~-~~~~~d~~~~~~~--~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  207 (282)
                      ..++|.|        +|+++||||||++ ++|++|.+.+.+.  .....++|.++|||++|+|+++|++|++|++||||+
T Consensus        22 ~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~  101 (363)
T 3m6i_A           22 ISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA  101 (363)
T ss_dssp             EEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEEECCCCCCCCCCCEEE
Confidence            3567788        8999999999999 9999999877643  123356799999999999999999999999999999


Q ss_pred             Ec-----------------------------cCCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCC
Q 023465          208 IM-----------------------------TFGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASG  257 (282)
Q Consensus       208 ~~-----------------------------~~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g  257 (282)
                      +.                             ..|+|+||+++|++.++++|+ +++++|.+ .+++|||++++++++++|
T Consensus       102 ~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~s~~~aa~~-~~~~ta~~~l~~~~~~~g  180 (363)
T 3m6i_A          102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGNMSYENGAML-EPLSVALAGLQRAGVRLG  180 (363)
T ss_dssp             ECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTTCCHHHHHHH-HHHHHHHHHHHHHTCCTT
T ss_pred             EecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCCCCHHHHHhh-hHHHHHHHHHHHcCCCCC
Confidence            74                             469999999999999999999 77777765 789999999999999999


Q ss_pred             CEEEEeCCCchHHHHHHHHHHHh
Q 023465          258 KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       258 ~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|||+|+ |++|++++|+||++
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~  202 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAA  202 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc
Confidence            99999998 99999999999975

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.97  E-value=2.6e-30  Score=231.70  Aligned_cols=140  Identities=21%  Similarity=0.312  Sum_probs=126.7

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++.        
T Consensus        24 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~  102 (357)
T 2cf5_A           24 PYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG-MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGG  102 (357)
T ss_dssp             EEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTT-CCCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSS
T ss_pred             EEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCC-CCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCC
Confidence            35677889999999999999 999999998877543 24679999999999999999999999999999852        


Q ss_pred             ----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCC-CCC
Q 023465          210 ----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA-SGK  258 (282)
Q Consensus       210 ----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~-~g~  258 (282)
                                                  ..|+||||+++|++.++++|+  +++++|++++++.|||+++++.+++ +||
T Consensus       103 C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~  182 (357)
T 2cf5_A          103 CSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGL  182 (357)
T ss_dssp             SHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTC
T ss_pred             ChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence                                        359999999999999999999  7889999999999999999888898 999


Q ss_pred             EEEEeCCCchHHHHHHHHHHHh
Q 023465          259 KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       259 ~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|||+|+ |++|++++|+||++
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~  203 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAM  203 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHC
Confidence            9999996 99999999999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.97  E-value=5.6e-30  Score=230.62  Aligned_cols=136  Identities=15%  Similarity=0.118  Sum_probs=120.7

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc---------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT---------  210 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------  210 (282)
                      ++|.|.|+++||||||++ ++|++|.+++.+.    ..+|.++|||++|+|+++|++|++|++||||++.+         
T Consensus        28 ~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~  103 (371)
T 3gqv_A           28 AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPD  103 (371)
T ss_dssp             EECCCCCCTTSEEEEEEEEECCGGGGC---------CCTTSCCCSEEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTT
T ss_pred             cCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCccccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCC
Confidence            677889999999999999 9999999887652    35699999999999999999999999999999875         


Q ss_pred             CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HH-hCC-----------CCCCEEEEeCCCchHHHHHHH
Q 023465          211 FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQ-AGP-----------ASGKKVLVTAAAGGTGQFAVQ  275 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~-~~~-----------~~g~~vli~ga~g~vG~~a~q  275 (282)
                      .|+|+||+++|++.++++|+  +++++|.+++++.|||+++ +. .++           ++|++|||+|++|++|++++|
T Consensus       104 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~q  183 (371)
T 3gqv_A          104 QGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQ  183 (371)
T ss_dssp             CCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHH
T ss_pred             CCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHH
Confidence            69999999999999999999  7899999999999999999 44 342           899999999999999999999


Q ss_pred             HHHHh
Q 023465          276 VYFQI  280 (282)
Q Consensus       276 ~a~~~  280 (282)
                      +||++
T Consensus       184 la~~~  188 (371)
T 3gqv_A          184 MLRLS  188 (371)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.97  E-value=2.4e-30  Score=233.22  Aligned_cols=138  Identities=22%  Similarity=0.232  Sum_probs=124.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+.  ..+|.++|||++|+|+++|++|++|++||||++..       
T Consensus        24 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C  101 (373)
T 1p0f_A           24 LETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSC  101 (373)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSS
T ss_pred             EEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCC
Confidence            35677889999999999999 999999998877543  46799999999999999999999999999998752       


Q ss_pred             ------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTAS  246 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~  246 (282)
                                                                .|+||||+++|++.++++|+  +++ +|++++++.|||
T Consensus       102 ~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~  180 (373)
T 1p0f_A          102 RACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGY  180 (373)
T ss_dssp             HHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHH
T ss_pred             hhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHH
Confidence                                                      38999999999999999999  677 888889999999


Q ss_pred             HHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       181 ~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~  214 (373)
T 1p0f_A          181 GAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAA  214 (373)
T ss_dssp             HHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             HHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            998 6788999999999997 99999999999975

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.97  E-value=3.9e-30  Score=231.91  Aligned_cols=138  Identities=20%  Similarity=0.237  Sum_probs=125.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------  210 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.+.+..  .+|.++|||++|+|+++|++|++|++||||++..        
T Consensus        24 ~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~  101 (374)
T 2jhf_A           24 EEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCR  101 (374)
T ss_dssp             EEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSH
T ss_pred             EEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCc
Confidence            4677889999999999999 9999999988876432  3799999999999999999999999999998742        


Q ss_pred             -----------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHH
Q 023465          211 -----------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASI  247 (282)
Q Consensus       211 -----------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~  247 (282)
                                                               .|+||||+++|++.++++|+  +++++|++++++.|||+
T Consensus       102 ~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~  181 (374)
T 2jhf_A          102 VCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG  181 (374)
T ss_dssp             HHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHH
T ss_pred             cccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHH
Confidence                                                     38999999999999999999  78889999999999999


Q ss_pred             HH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 AL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       182 ~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~  214 (374)
T 2jhf_A          182 SAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAA  214 (374)
T ss_dssp             HHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            98 6788999999999996 99999999999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.97  E-value=1e-30  Score=233.49  Aligned_cols=139  Identities=22%  Similarity=0.270  Sum_probs=122.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccC-CCC-CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSD-GND-IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~-~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+ .+. ....+|.++|||++|+|+++|++|++|++||||++.      
T Consensus        19 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg   98 (348)
T 2d8a_A           19 LVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCG   98 (348)
T ss_dssp             EEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCS
T ss_pred             EEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCC
Confidence            35677889999999999999 999999998877 321 124679999999999999999999999999999985      


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                            ..|+|+||+++|++.++++|+  +++++|.+ .+++|||++++++++ +|++|||+|+
T Consensus        99 ~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~~~~-~g~~VlV~Ga  176 (348)
T 2d8a_A           99 KCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTVLAGPI-SGKSVLITGA  176 (348)
T ss_dssp             CCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHHTTSCC-TTCCEEEECC
T ss_pred             CChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHHHhcCC-CCCEEEEECC
Confidence                                  249999999999999999999  66666554 689999999988889 9999999999


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+|+++
T Consensus       177 -G~vG~~~~q~a~~~  190 (348)
T 2d8a_A          177 -GPLGLLGIAVAKAS  190 (348)
T ss_dssp             -SHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHc
Confidence             99999999999975

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.97  E-value=4.1e-30  Score=231.62  Aligned_cols=140  Identities=19%  Similarity=0.238  Sum_probs=126.2

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++..       
T Consensus        21 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C   99 (373)
T 2fzw_A           21 IEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGEC   99 (373)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCS
T ss_pred             EEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC-CCCCCccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCC
Confidence            34677888999999999999 999999998877543 246799999999999999999999999999998752       


Q ss_pred             ------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHH
Q 023465          211 ------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTAS  246 (282)
Q Consensus       211 ------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~  246 (282)
                                                                .|+||||+++|++.++++|+  +++++|++++++.|||
T Consensus       100 ~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~  179 (373)
T 2fzw_A          100 KFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY  179 (373)
T ss_dssp             HHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHH
T ss_pred             hHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHH
Confidence                                                      38999999999999999999  7889999999999999


Q ss_pred             HHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       180 ~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~  213 (373)
T 2fzw_A          180 GAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVA  213 (373)
T ss_dssp             HHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            998 6788899999999997 99999999999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=3.8e-30  Score=231.92  Aligned_cols=139  Identities=19%  Similarity=0.233  Sum_probs=125.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccc-cccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGR-YFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~-~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ..++|.|+|+++||||||++ ++|++|.+ ...|.+.  ..+|.++|||++|+|+++|++|++|++||||++..      
T Consensus        23 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~  100 (374)
T 1cdo_A           23 IEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGE  100 (374)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSS
T ss_pred             EEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCC
Confidence            34677889999999999999 99999998 7776543  56899999999999999999999999999998752      


Q ss_pred             -------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHH
Q 023465          211 -------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTA  245 (282)
Q Consensus       211 -------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta  245 (282)
                                                                 .|+||||+++|++.++++|+  +++++|++++++.||
T Consensus       101 C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta  180 (374)
T 1cdo_A          101 CRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG  180 (374)
T ss_dssp             SHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHH
T ss_pred             ChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHH
Confidence                                                       38999999999999999999  788999999999999


Q ss_pred             HHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       181 ~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~  215 (374)
T 1cdo_A          181 FGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSA  215 (374)
T ss_dssp             HHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9998 6788999999999996 99999999999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.97  E-value=4.1e-30  Score=231.88  Aligned_cols=139  Identities=19%  Similarity=0.163  Sum_probs=125.3

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.  ....+|.++|||++|+|+++|++|++|++||||++..       
T Consensus        23 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C  100 (376)
T 1e3i_A           23 IEEIEVSPPKACEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRC  100 (376)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT--SCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSS
T ss_pred             EEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC--CCCCCCcccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCC
Confidence            34677888999999999999 9999999888764  2346799999999999999999999999999998741       


Q ss_pred             ----------------------------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHH
Q 023465          211 ----------------------------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSG  242 (282)
Q Consensus       211 ----------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~  242 (282)
                                                                    .|+||||+++|++.++++|+  +++++|++++++
T Consensus       101 ~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~  180 (376)
T 1e3i_A          101 KLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF  180 (376)
T ss_dssp             HHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHH
T ss_pred             ccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHH
Confidence                                                          28999999999999999999  788889999999


Q ss_pred             HHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          243 LTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       243 ~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .|||+++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       181 ~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~  218 (376)
T 1e3i_A          181 SSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIA  218 (376)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9999998 6788899999999997 99999999999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.97  E-value=5.1e-30  Score=228.64  Aligned_cols=138  Identities=27%  Similarity=0.394  Sum_probs=123.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC-CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI-GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+...+.+.. ...+|.++|||++|+|+++|++ ++|++||||+..       
T Consensus        18 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~   96 (344)
T 2h6e_A           18 IEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLT   96 (344)
T ss_dssp             --EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSC
T ss_pred             EEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCCCCCEEEECCCCCCCC
Confidence            35677889999999999999 9999999988876431 2467999999999999999999 999999999765       


Q ss_pred             ---------------------cCCccccEEeec-CCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHh-----CCCCCCEE
Q 023465          210 ---------------------TFGSYAEFTMVP-SKHILPVAR--PDPEVVAMLTSGLTASIALEQA-----GPASGKKV  260 (282)
Q Consensus       210 ---------------------~~G~~ae~~~v~-~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~-----~~~~g~~v  260 (282)
                                           ..|+|+||+++| ++.++++ +  +++++|++++++.|||+++++.     ++ +||+|
T Consensus        97 C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~V  174 (344)
T 2h6e_A           97 CRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVV  174 (344)
T ss_dssp             STTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEE
T ss_pred             ChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEE
Confidence                                 259999999999 9999999 7  7888999999999999999777     89 99999


Q ss_pred             EEeCCCchHHHHHHHHHHHh
Q 023465          261 LVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       261 li~ga~g~vG~~a~q~a~~~  280 (282)
                      ||+|+ |++|++++|+||++
T Consensus       175 lV~Ga-G~vG~~aiqlak~~  193 (344)
T 2h6e_A          175 IVNGI-GGLAVYTIQILKAL  193 (344)
T ss_dssp             EEECC-SHHHHHHHHHHHHH
T ss_pred             EEECC-CHHHHHHHHHHHHh
Confidence            99999 99999999999986

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.97  E-value=3.1e-30  Score=230.71  Aligned_cols=138  Identities=22%  Similarity=0.267  Sum_probs=124.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccc-cccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGR-YFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~-~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      .++|.|+|+++||||||++ ++|++|.+ +..|.+  +.++|.++|||++|+|+++|++|++|++||||++.        
T Consensus        15 ~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c   92 (352)
T 3fpc_A           15 IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI--GERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRT   92 (352)
T ss_dssp             EECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT--CCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSS
T ss_pred             EeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC--CCCCCcccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCc
Confidence            4677889999999999999 99999998 456653  34679999999999999999999999999999963        


Q ss_pred             -----------------------cCCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          210 -----------------------TFGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       210 -----------------------~~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                                             ..|+|+||+++|+.  .++++|+  +++++|.++++++|||++++++++++||+|||
T Consensus        93 ~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV  172 (352)
T 3fpc_A           93 SEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCV  172 (352)
T ss_dssp             HHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEE
T ss_pred             hhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEE
Confidence                                   35999999999986  8999999  78888888899999999999999999999999


Q ss_pred             eCCCchHHHHHHHHHHHh
Q 023465          263 TAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       263 ~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+ |++|++++|+||++
T Consensus       173 ~Ga-G~vG~~a~qla~~~  189 (352)
T 3fpc_A          173 IGI-GPVGLMSVAGANHL  189 (352)
T ss_dssp             ECC-SHHHHHHHHHHHTT
T ss_pred             ECC-CHHHHHHHHHHHHc
Confidence            997 99999999999975

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=2.6e-30  Score=232.78  Aligned_cols=139  Identities=18%  Similarity=0.192  Sum_probs=126.1

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+  +..+|.++|||++|+|+++|++|++|++||||++.        
T Consensus        21 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~   98 (371)
T 1f8f_A           21 LQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY--PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCT   98 (371)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS--CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSH
T ss_pred             EEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCC--CCCCCcccCcccceEEEEeCCCCCCCCCCCEEEecCCCCCCCh
Confidence            35677889999999999999 99999999888754  34679999999999999999999999999999862        


Q ss_pred             ------------------------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHH
Q 023465          210 ------------------------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTA  245 (282)
Q Consensus       210 ------------------------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta  245 (282)
                                                                ..|+|+||+++|++.++++|+  +++++|++++++.||
T Consensus        99 ~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  178 (371)
T 1f8f_A           99 QCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTG  178 (371)
T ss_dssp             HHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHH
T ss_pred             hhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHH
Confidence                                                      138999999999999999999  788888999999999


Q ss_pred             HHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++ +++++++||+|||+|+ |++|++++|+||++
T Consensus       179 ~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~  213 (371)
T 1f8f_A          179 AGACINALKVTPASSFVTWGA-GAVGLSALLAAKVC  213 (371)
T ss_dssp             HHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            9999 6788999999999996 99999999999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.97  E-value=7.9e-31  Score=234.30  Aligned_cols=137  Identities=26%  Similarity=0.313  Sum_probs=124.6

Q ss_pred             cCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCC-CCCCCCCeeEEcc----CCcccc
Q 023465          143 NVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV-NNVKVGTPAAIMT----FGSYAE  216 (282)
Q Consensus       143 ~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~----~G~~ae  216 (282)
                      +.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++|++| ++|++||||++..    .|+|+|
T Consensus        43 ~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~ae  122 (349)
T 3pi7_A           43 AVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAE  122 (349)
T ss_dssp             ECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBS
T ss_pred             CCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCcccee
Confidence            8899999999999999 999999999888765556789999999999999999999 9999999999874    799999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHHHh
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASG-KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g-~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+++|++.++++|+  +++++|++++.++|||+++++++ ++| ++|||+|++|++|++++|+|+++
T Consensus       123 y~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~  188 (349)
T 3pi7_A          123 YAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE  188 (349)
T ss_dssp             EEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH
T ss_pred             eEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC
Confidence            99999999999999  78999999999999998887777 777 79999999999999999999975

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.96  E-value=7.3e-30  Score=227.87  Aligned_cols=141  Identities=30%  Similarity=0.392  Sum_probs=126.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC-------CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI-------GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~-------~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+..       ...+|.++|||++|+|+++|++|++|++||||++. 
T Consensus        15 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~   94 (347)
T 1jvb_A           15 LQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNP   94 (347)
T ss_dssp             EEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECC
T ss_pred             EEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCCCCCCCCCCEEEeCC
Confidence            34677888999999999999 9999999887765331       34679999999999999999999999999999764 


Q ss_pred             ---------------------------cCCccccEEeecC-CCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCE
Q 023465          210 ---------------------------TFGSYAEFTMVPS-KHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKK  259 (282)
Q Consensus       210 ---------------------------~~G~~ae~~~v~~-~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~  259 (282)
                                                 ..|+|+||+++|+ +.++++ +  +++++|++++++.|||++++++++++|++
T Consensus        95 ~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~  173 (347)
T 1jvb_A           95 WQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKT  173 (347)
T ss_dssp             EECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHHHTTCCTTCE
T ss_pred             CCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHHHhcCCCCCCE
Confidence                                       2599999999999 999999 7  78889999999999999998899999999


Q ss_pred             EEEeCCCchHHHHHHHHHHHh
Q 023465          260 VLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       260 vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |||+|++|++|++++|+|+++
T Consensus       174 vlV~Gagg~iG~~~~~~a~~~  194 (347)
T 1jvb_A          174 LLVVGAGGGLGTMAVQIAKAV  194 (347)
T ss_dssp             EEEETTTSHHHHHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHHHc
Confidence            999999779999999999976

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=1.1e-29  Score=228.63  Aligned_cols=141  Identities=26%  Similarity=0.380  Sum_probs=126.3

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      ...++|.|+|+++||||||++ ++|++|.+...+.+. ...+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        36 ~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg  114 (369)
T 1uuf_A           36 EPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCK  114 (369)
T ss_dssp             EEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCS
T ss_pred             EEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCCeecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCC
Confidence            345677889999999999999 999999998877543 24579999999999999999999999999999852       


Q ss_pred             ------------------------------cCCccccEEeecCCCeeeCCCC---hHHHHHhhhHHHHHHHHHHHhCCCC
Q 023465          210 ------------------------------TFGSYAEFTMVPSKHILPVARP---DPEVVAMLTSGLTASIALEQAGPAS  256 (282)
Q Consensus       210 ------------------------------~~G~~ae~~~v~~~~~~~~p~~---~~~~a~l~~~~~ta~~~l~~~~~~~  256 (282)
                                                    ..|+||||+++|++.++++|++   ++++|++++++.|||++++++++++
T Consensus       115 ~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~~~~~~  194 (369)
T 1uuf_A          115 HCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGP  194 (369)
T ss_dssp             SSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHHTTCCT
T ss_pred             CCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHhcCCCC
Confidence                                          2499999999999999999985   6778889999999999998889999


Q ss_pred             CCEEEEeCCCchHHHHHHHHHHHh
Q 023465          257 GKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       257 g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ||+|||+|+ |++|++++|+||++
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~  217 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAM  217 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC
Confidence            999999998 99999999999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.96  E-value=2.3e-30  Score=238.62  Aligned_cols=143  Identities=22%  Similarity=0.241  Sum_probs=123.6

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccc----------------cCCCCCCCCCC-CcccCCceEEEEEeCCCCCC
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYF----------------SDGNDIGSRLP-FDAGFEAVGLIAAVGDSVNN  199 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~----------------~~~~~~~~~~p-~~~G~e~~G~V~~vG~~v~~  199 (282)
                      ...++|.|+|+++||||||++ ++|.+|.+..                .+.+.....+| .++|||++|+|+++|++|++
T Consensus        51 ~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~  130 (447)
T 4a0s_A           51 RLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRR  130 (447)
T ss_dssp             EEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCS
T ss_pred             eEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccccccCCCCcccccceeEEEEEECCCCCC
Confidence            345677899999999999999 9999986431                12222223466 69999999999999999999


Q ss_pred             CCCCCeeEEcc----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH
Q 023465          200 VKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL  249 (282)
Q Consensus       200 ~~~Gd~V~~~~----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l  249 (282)
                      |++||||++.+                            +|+||||+++|++.++++|+  +++++|+++++++|||+++
T Consensus       131 ~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al  210 (447)
T 4a0s_A          131 WKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRML  210 (447)
T ss_dssp             CCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence            99999999864                            59999999999999999999  7889998999999999999


Q ss_pred             H---HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          250 E---QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       250 ~---~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .   .+++++|++|||+|++|++|++++|+|+++
T Consensus       211 ~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~  244 (447)
T 4a0s_A          211 VSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG  244 (447)
T ss_dssp             TSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             HhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence            3   378899999999999999999999999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.96  E-value=5.6e-30  Score=226.45  Aligned_cols=139  Identities=20%  Similarity=0.298  Sum_probs=124.2

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------cC
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------TF  211 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~~  211 (282)
                      .++|.|+|+++||||||++ ++|++|.+...|.+.....+|.++|||++|+|+++|  +++|++||||++.       ..
T Consensus        18 ~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~~~~g~~~~   95 (324)
T 3nx4_A           18 QHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTGWGVGENHW   95 (324)
T ss_dssp             EECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCCTTCEEEEECTTBTTTBC
T ss_pred             eecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCCCCCEEEEcccccCCCCC
Confidence            4677888999999999999 999999999888765556889999999999999998  6899999999975       46


Q ss_pred             CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH---HHhCCCCCC-EEEEeCCCchHHHHHHHHHHHh
Q 023465          212 GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL---EQAGPASGK-KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       212 G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l---~~~~~~~g~-~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+|+||+++|++.++++|+  +++++|++++++.|||+++   .+.++++++ +|||+|++|++|++++|+||++
T Consensus        96 G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~  170 (324)
T 3nx4_A           96 GGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL  170 (324)
T ss_dssp             CSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT
T ss_pred             CceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHc
Confidence            9999999999999999999  8999999999999999887   456677643 4999999999999999999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.96  E-value=7.8e-30  Score=229.30  Aligned_cols=140  Identities=24%  Similarity=0.339  Sum_probs=126.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+. ...+|.++|||++|+|+++|++|++|++||||++.        
T Consensus        31 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~  109 (366)
T 1yqd_A           31 PFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWG-FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHS  109 (366)
T ss_dssp             EEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSS-CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSS
T ss_pred             EEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCC-CCCCCEecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCC
Confidence            34677888999999999999 999999998877543 24679999999999999999999999999999852        


Q ss_pred             ----------------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCC-CCC
Q 023465          210 ----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA-SGK  258 (282)
Q Consensus       210 ----------------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~-~g~  258 (282)
                                                  ..|+||||+++|++.++++|+  +++++|++++++.|||+++++.+++ +|+
T Consensus       110 C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~  189 (366)
T 1yqd_A          110 CESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGK  189 (366)
T ss_dssp             SHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTCCCTTC
T ss_pred             ChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCcCCCCC
Confidence                                        359999999999999999999  7888999999999999999888888 999


Q ss_pred             EEEEeCCCchHHHHHHHHHHHh
Q 023465          259 KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       259 ~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|||+|+ |++|++++|+|+++
T Consensus       190 ~VlV~Ga-G~vG~~~~q~a~~~  210 (366)
T 1yqd_A          190 HIGIVGL-GGLGHVAVKFAKAF  210 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHC
Confidence            9999997 99999999999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.96  E-value=4.6e-30  Score=228.79  Aligned_cols=139  Identities=25%  Similarity=0.276  Sum_probs=122.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCC--CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI--GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM------  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.+..  ...+|.++|||++|+|+++|++|++|++||||++.      
T Consensus        15 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg   94 (343)
T 2dq4_A           15 LVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCH   94 (343)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCS
T ss_pred             EEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCCCCCEEEECCCCCCC
Confidence            35677888999999999999 9999999988765321  24679999999999999999999999999999984      


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTA  264 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~g  264 (282)
                                            ..|+|+||+++|++.++++|+  +++++|. ..++.|||++++ ++++ +|++|||+|
T Consensus        95 ~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~-~~~~~ta~~~l~~~~~~-~g~~VlV~G  172 (343)
T 2dq4_A           95 ACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAI-LEPFGNAVHTVYAGSGV-SGKSVLITG  172 (343)
T ss_dssp             CSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTT-HHHHHHHHHHHHSTTCC-TTSCEEEEC
T ss_pred             CChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHh-hhHHHHHHHHHHHhCCC-CCCEEEEEC
Confidence                                  359999999999999999999  5666655 478999999997 8899 999999999


Q ss_pred             CCchHHHHHHHHHHHh
Q 023465          265 AAGGTGQFAVQVYFQI  280 (282)
Q Consensus       265 a~g~vG~~a~q~a~~~  280 (282)
                      + |++|++++|+||++
T Consensus       173 a-G~vG~~~~q~a~~~  187 (343)
T 2dq4_A          173 A-GPIGLMAAMVVRAS  187 (343)
T ss_dssp             C-SHHHHHHHHHHHHT
T ss_pred             C-CHHHHHHHHHHHHc
Confidence            9 99999999999975

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.96  E-value=2.4e-29  Score=224.31  Aligned_cols=139  Identities=21%  Similarity=0.252  Sum_probs=121.7

Q ss_pred             CccccCCC-CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          139 PLNLNVQL-PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       139 ~~~~~~p~-~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ..++|+|+ +++|||||||++ ++|++|++.+.+..  +..+|+++|||++|+|+++|++|++|++||||.+..      
T Consensus        14 v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~--~~~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~   91 (346)
T 4a2c_A           14 VAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG--AHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFT   91 (346)
T ss_dssp             EEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC--SSSSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSC
T ss_pred             EEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC--CCCCCccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCC
Confidence            35677887 579999999999 99999998877753  457899999999999999999999999999998742      


Q ss_pred             ----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCC
Q 023465          211 ----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA  266 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~  266 (282)
                                            +|+||||+++|++.++++|+  +++++| +..++.++++++++.++++||+|||+|+ 
T Consensus        92 c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa-~l~~~~~~~~~~~~~~~~~g~~VlV~Ga-  169 (346)
T 4a2c_A           92 CPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGA-FIEPITVGLHAFHLAQGCENKNVIIIGA-  169 (346)
T ss_dssp             SHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGG-GHHHHHHHHHHHHHTTCCTTSEEEEECC-
T ss_pred             cccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHH-hchHHHHHHHHHHHhccCCCCEEEEECC-
Confidence                                  39999999999999999999  566655 4557778888889999999999999998 


Q ss_pred             chHHHHHHHHHHHhh
Q 023465          267 GGTGQFAVQVYFQIQ  281 (282)
Q Consensus       267 g~vG~~a~q~a~~~~  281 (282)
                      |++|++++|+||++.
T Consensus       170 G~vG~~aiq~ak~~G  184 (346)
T 4a2c_A          170 GTIGLLAIQCAVALG  184 (346)
T ss_dssp             SHHHHHHHHHHHHTT
T ss_pred             CCcchHHHHHHHHcC
Confidence            999999999999864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=1.8e-29  Score=227.94  Aligned_cols=139  Identities=22%  Similarity=0.251  Sum_probs=123.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC------CCCCCCeeEEc--
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN------NVKVGTPAAIM--  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~--  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.|.+. ...+|.++|||++|+|+++| +|+      +|++||||++.  
T Consensus        32 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~  109 (380)
T 1vj0_A           32 YKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRG  109 (380)
T ss_dssp             EEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSE
T ss_pred             EEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEccc
Confidence            35677888999999999999 999999998887543 24689999999999999999 999      99999999973  


Q ss_pred             -----------------------------------cCCccccEEee-cCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHH
Q 023465          210 -----------------------------------TFGSYAEFTMV-PSKHILPVAR--PDPEVVAMLTSGLTASIALEQ  251 (282)
Q Consensus       210 -----------------------------------~~G~~ae~~~v-~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~  251 (282)
                                                         ..|+||||+++ |++.++++|+  ++++.|++.++++|||+++++
T Consensus       110 ~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~  189 (380)
T 1vj0_A          110 ITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDE  189 (380)
T ss_dssp             ECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHT
T ss_pred             CCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHhHhhhcHHHHHHHHHHh
Confidence                                               15999999999 9999999999  566466677799999999988


Q ss_pred             hC-CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          252 AG-PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       252 ~~-~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++ +++|++|||+| +|++|++++|+||++
T Consensus       190 ~~~~~~g~~VlV~G-aG~vG~~aiqlak~~  218 (380)
T 1vj0_A          190 YPESFAGKTVVIQG-AGPLGLFGVVIARSL  218 (380)
T ss_dssp             CSSCCBTCEEEEEC-CSHHHHHHHHHHHHT
T ss_pred             cCCCCCCCEEEEEC-cCHHHHHHHHHHHHc
Confidence            88 99999999999 699999999999975

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=2.4e-29  Score=224.89  Aligned_cols=139  Identities=24%  Similarity=0.242  Sum_probs=121.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCC-CC-CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDG-ND-IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~-~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .++|.|+|+++||||||++ ++|++|.+.+.+. +. ....+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        19 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~   98 (352)
T 1e3j_A           19 EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRR   98 (352)
T ss_dssp             EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSS
T ss_pred             EEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCC
Confidence            4567788999999999999 9999998877632 21 223579999999999999999999999999999874       


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                            ..|+|+||+++|++.++++|+  +++++| +.++++|||++++++++++||+|||+|+
T Consensus        99 C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa-~~~~~~ta~~al~~~~~~~g~~VlV~Ga  177 (352)
T 1e3j_A           99 CQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGA-LLEPLSVGVHACRRAGVQLGTTVLVIGA  177 (352)
T ss_dssp             SHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHH-THHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             ChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHH-hhchHHHHHHHHHhcCCCCCCEEEEECC
Confidence                                  259999999999999999999  566655 5689999999999899999999999997


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+||++
T Consensus       178 -G~vG~~a~qla~~~  191 (352)
T 1e3j_A          178 -GPIGLVSVLAAKAY  191 (352)
T ss_dssp             -SHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHc
Confidence             99999999999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.96  E-value=2.4e-29  Score=225.33  Aligned_cols=139  Identities=25%  Similarity=0.281  Sum_probs=121.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------  209 (282)
                      .+++.|+|+++||||||++ ++|++|.+.+.+..  .....+|.++|||++|+|+++|++|++|++||||++.       
T Consensus        22 ~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~  101 (356)
T 1pl8_A           22 ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPREN  101 (356)
T ss_dssp             EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSC
T ss_pred             EEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCC
Confidence            4667788999999999999 99999988776431  1123579999999999999999999999999999974       


Q ss_pred             ----------------------cCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          210 ----------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       210 ----------------------~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                            ..|+|+||+++|++.++++|+  +++++| +.++++|||++++++++++||+|||+|+
T Consensus       102 C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa-~~~~~~ta~~al~~~~~~~g~~VlV~Ga  180 (356)
T 1pl8_A          102 DEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGA-LIEPLSVGIHACRRGGVTLGHKVLVCGA  180 (356)
T ss_dssp             CHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHH-HHHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             ChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHH-hhchHHHHHHHHHhcCCCCCCEEEEECC
Confidence                                  259999999999999999999  666655 5689999999999999999999999997


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                       |++|++++|+||++
T Consensus       181 -G~vG~~aiqlak~~  194 (356)
T 1pl8_A          181 -GPIGMVTLLVAKAM  194 (356)
T ss_dssp             -SHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHc
Confidence             99999999999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.96  E-value=1.6e-29  Score=224.04  Aligned_cols=140  Identities=24%  Similarity=0.348  Sum_probs=123.9

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------c
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------T  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~  210 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++  ++++|++||||++.       .
T Consensus        21 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~   98 (330)
T 1tt7_A           21 VKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFAEGDEVIATSYELGVSR   98 (330)
T ss_dssp             EEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCCTTCEEEEESTTBTTTB
T ss_pred             EeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCCCCCEEEEcccccCCCC
Confidence            35677888999999999999 99999999887765444568999999999999996  46899999999975       3


Q ss_pred             CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH---HHhCCCCCC-EEEEeCCCchHHHHHHHHHHHh
Q 023465          211 FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL---EQAGPASGK-KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l---~~~~~~~g~-~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .|+|+||+++|++.++++|+  +++++|++++++.|||.++   ++.++++|+ +|||+|++|++|++++|+||++
T Consensus        99 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~  174 (330)
T 1tt7_A           99 DGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKR  174 (330)
T ss_dssp             CCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHH
T ss_pred             CccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHC
Confidence            69999999999999999999  7899999999999999876   456789997 9999999999999999999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=2e-29  Score=223.29  Aligned_cols=140  Identities=24%  Similarity=0.405  Sum_probs=123.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc-------c
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-------T  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~  210 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.|.+.....+|.++|||++|+|+++  ++++|++||||++.       .
T Consensus        20 ~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~   97 (328)
T 1xa0_A           20 VQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGYEIGVTH   97 (328)
T ss_dssp             EEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEESTTBTTTB
T ss_pred             EEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCCCCCEEEEccccCCCCC
Confidence            34667788999999999999 99999999887754434568999999999999995  57899999999975       3


Q ss_pred             CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH---HHhCCCCCC-EEEEeCCCchHHHHHHHHHHHh
Q 023465          211 FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL---EQAGPASGK-KVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l---~~~~~~~g~-~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .|+|+||+++|++.++++|+  +++++|++++++.|||.++   +++++++|+ +|||+|++|++|++++|+||++
T Consensus        98 ~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~  173 (328)
T 1xa0_A           98 FGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKR  173 (328)
T ss_dssp             CCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT
T ss_pred             CccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHC
Confidence            69999999999999999999  7899999999999999876   456789997 9999999999999999999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.96  E-value=4.3e-29  Score=226.87  Aligned_cols=138  Identities=17%  Similarity=0.159  Sum_probs=123.2

Q ss_pred             ccccCCCC-CC-----CcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc---
Q 023465          140 LNLNVQLP-ES-----FEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---  209 (282)
Q Consensus       140 ~~~~~p~~-~~-----~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---  209 (282)
                      .++|.|+| ++     +||||||++ ++|++|.+.+.|.+  +..+|.++|||++|+|+++|++|++|++||||++.   
T Consensus        17 ~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~--~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~   94 (398)
T 2dph_A           17 ETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF--IVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNV   94 (398)
T ss_dssp             EEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS--CCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBC
T ss_pred             EEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC--CCCCCcccCCceEEEEEEECCCCCCCCCCCEEEEcCCC
Confidence            45667776 57     999999999 99999999888753  34679999999999999999999999999999863   


Q ss_pred             ------------------------------------cCCccccEEeecCC--CeeeCCC--ChHH----HHHhhhHHHHH
Q 023465          210 ------------------------------------TFGSYAEFTMVPSK--HILPVAR--PDPE----VVAMLTSGLTA  245 (282)
Q Consensus       210 ------------------------------------~~G~~ae~~~v~~~--~~~~~p~--~~~~----~a~l~~~~~ta  245 (282)
                                                          ..|+||||+++|++  .++++|+  ++++    +|+++++++||
T Consensus        95 ~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta  174 (398)
T 2dph_A           95 ACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTG  174 (398)
T ss_dssp             CCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHH
T ss_pred             CCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHH
Confidence                                                24999999999987  7999999  5666    78899999999


Q ss_pred             HHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++++++++++||+|||+|+ |++|++++|+||++
T Consensus       175 ~~al~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~  208 (398)
T 2dph_A          175 FHGCVSAGVKPGSHVYIAGA-GPVGRCAAAGARLL  208 (398)
T ss_dssp             HHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            99998899999999999997 99999999999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.96  E-value=2.7e-29  Score=232.01  Aligned_cols=142  Identities=26%  Similarity=0.274  Sum_probs=122.6

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCC----------------CCCCCCCC-CcccCCceEEEEEeCCCCCCC
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDG----------------NDIGSRLP-FDAGFEAVGLIAAVGDSVNNV  200 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~----------------~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~  200 (282)
                      ..++|.|+|+++||||||++ ++|.+|.+...+.                +.....+| .++|||++|+|+++|++|++|
T Consensus        60 ~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~  139 (456)
T 3krt_A           60 LDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAW  139 (456)
T ss_dssp             EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSC
T ss_pred             EEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEEEEEEECCCCCCC
Confidence            35677889999999999999 9999997543211                01123567 699999999999999999999


Q ss_pred             CCCCeeEEcc----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH
Q 023465          201 KVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE  250 (282)
Q Consensus       201 ~~Gd~V~~~~----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~  250 (282)
                      ++||||++.+                            +|+||||+++|++.++++|+  +++++|++++++.|||+++.
T Consensus       140 ~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~  219 (456)
T 3krt_A          140 QAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLV  219 (456)
T ss_dssp             CTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHH
Confidence            9999999853                            49999999999999999999  78888889999999999994


Q ss_pred             H---hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          251 Q---AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       251 ~---~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .   +++++||+|||+|++|++|++++|+||++
T Consensus       220 ~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~  252 (456)
T 3krt_A          220 SRNGAGMKQGDNVLIWGASGGLGSYATQFALAG  252 (456)
T ss_dssp             STTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             hhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence            3   68899999999999999999999999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.96  E-value=1.1e-29  Score=229.40  Aligned_cols=141  Identities=21%  Similarity=0.246  Sum_probs=126.5

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCC----------------------------CCCCCCCcccCCceEE
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND----------------------------IGSRLPFDAGFEAVGL  189 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~----------------------------~~~~~p~~~G~e~~G~  189 (282)
                      ..++|.|+|+++||||||++ ++|++|.+...+.+.                            ....+|+++|||++|+
T Consensus        22 ~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~~~~~p~i~G~e~~G~  101 (379)
T 3iup_A           22 LDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGV  101 (379)
T ss_dssp             EEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGGGTTEEEECCSCEEEE
T ss_pred             EEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccccccCCCccceeeeEEE
Confidence            35677889999999999999 999999988776421                            0235789999999999


Q ss_pred             EEEeCCCC-CCCCCCCeeEEccCCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC-C
Q 023465          190 IAAVGDSV-NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA-A  265 (282)
Q Consensus       190 V~~vG~~v-~~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g-a  265 (282)
                      |+++|++| ++|++||||++...|+|+||+++|++.++++|+  +++++|++++..+|||+++++.. ++||+|||+| +
T Consensus       102 V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag  180 (379)
T 3iup_A          102 VVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAA  180 (379)
T ss_dssp             EEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESST
T ss_pred             EEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCC
Confidence            99999999 899999999999999999999999999999999  78999999999999999887766 8999999996 7


Q ss_pred             CchHHHHHHHHHHHh
Q 023465          266 AGGTGQFAVQVYFQI  280 (282)
Q Consensus       266 ~g~vG~~a~q~a~~~  280 (282)
                      +|++|++++|+||++
T Consensus       181 ~G~vG~~a~q~a~~~  195 (379)
T 3iup_A          181 ASNLGQMLNQICLKD  195 (379)
T ss_dssp             TSHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHC
Confidence            799999999999975

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=9.2e-29  Score=224.67  Aligned_cols=138  Identities=19%  Similarity=0.224  Sum_probs=122.4

Q ss_pred             ccccCCCCC-CCc------EEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--
Q 023465          140 LNLNVQLPE-SFE------KLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--  209 (282)
Q Consensus       140 ~~~~~p~~~-~~~------vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--  209 (282)
                      .++|.|+|+ ++|      |||||++ ++|++|.+.+.|.+  +..+|.++|||++|+|+++|++|++|++||||++.  
T Consensus        17 ~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~   94 (398)
T 1kol_A           17 QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN   94 (398)
T ss_dssp             EEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS--CCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSE
T ss_pred             EEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC--CCCCCcccCcccEEEEEEECCCCCcCCCCCEEEECCc
Confidence            456678886 888      9999999 99999999887753  34678999999999999999999999999999852  


Q ss_pred             ------------------------------------cCCccccEEeecCC--CeeeCCC--ChHH----HHHhhhHHHHH
Q 023465          210 ------------------------------------TFGSYAEFTMVPSK--HILPVAR--PDPE----VVAMLTSGLTA  245 (282)
Q Consensus       210 ------------------------------------~~G~~ae~~~v~~~--~~~~~p~--~~~~----~a~l~~~~~ta  245 (282)
                                                          ..|+||||+++|++  .++++|+  ++.+    +|+++++++||
T Consensus        95 ~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta  174 (398)
T 1kol_A           95 VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTG  174 (398)
T ss_dssp             ECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHH
T ss_pred             CCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHH
Confidence                                                24999999999987  7999999  5565    78899999999


Q ss_pred             HHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          246 SIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       246 ~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++++++++++||+|||+|+ |++|++++|+||++
T Consensus       175 ~~al~~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~  208 (398)
T 1kol_A          175 YHGAVTAGVGPGSTVYVAGA-GPVGLAAAASARLL  208 (398)
T ss_dssp             HHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCCCCEEEEECC-cHHHHHHHHHHHHC
Confidence            99999899999999999996 99999999999975

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.95  E-value=4.4e-29  Score=223.67  Aligned_cols=137  Identities=20%  Similarity=0.190  Sum_probs=122.0

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCC---CCcccCCceEEEEEeCCCCCCCCCCCeeEEc-----
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRL---PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----  209 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----  209 (282)
                      ..++|.|+|+++||||||++ ++|++|.+.+.+.++. ..+   |.++|||++| |+++|++ ++|++||||++.     
T Consensus        15 ~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~   91 (357)
T 2b5w_A           15 VIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPP   91 (357)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-SSCCTTCEEEECSEECC
T ss_pred             EEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-CCCCCCCEEEECCcCCC
Confidence            35677888999999999999 9999999988876432 356   8999999999 9999999 999999999975     


Q ss_pred             ------------------------c----CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCC---
Q 023465          210 ------------------------T----FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASG---  257 (282)
Q Consensus       210 ------------------------~----~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g---  257 (282)
                                              .    .|+||||+++|++.++++|+ -+ ++|+++++++|||++++++++++|   
T Consensus        92 ~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~~~~ta~~al~~~~~~~g~~~  170 (357)
T 2b5w_A           92 ASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFD  170 (357)
T ss_dssp             TTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHHHHHHHHHHHHHHHHTTTTSC
T ss_pred             CCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhchHHHHHHHHHhcCCCCCccc
Confidence                                    1    49999999999999999999 33 678899999999999988888999   


Q ss_pred             ---CEEEEeCCCchHHHHH-HHHH-HHh
Q 023465          258 ---KKVLVTAAAGGTGQFA-VQVY-FQI  280 (282)
Q Consensus       258 ---~~vli~ga~g~vG~~a-~q~a-~~~  280 (282)
                         ++|||+|+ |++|+++ +|+| |++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~  197 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDK  197 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHc
Confidence               99999999 9999999 9999 754

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.95  E-value=1.7e-28  Score=223.39  Aligned_cols=142  Identities=16%  Similarity=0.172  Sum_probs=124.2

Q ss_pred             CCccccCCC-CCCCcEEEEEEc-cccccccccccCC------CCCCCCCCCcccCCceEEEEEeCCCC------CCCCCC
Q 023465          138 VPLNLNVQL-PESFEKLLWIYG-QVNFSSGRYFSDG------NDIGSRLPFDAGFEAVGLIAAVGDSV------NNVKVG  203 (282)
Q Consensus       138 ~~~~~~~p~-~~~~~vlv~v~~-~~~~~d~~~~~~~------~~~~~~~p~~~G~e~~G~V~~vG~~v------~~~~~G  203 (282)
                      ...++|.|+ |+++||||||++ ++|++|.+.+.+.      +....++|.++|||++|+|+++|++|      ++|++|
T Consensus        43 ~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vG  122 (404)
T 3ip1_A           43 RVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIG  122 (404)
T ss_dssp             EEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTT
T ss_pred             EEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCC
Confidence            345677888 999999999999 9999999887653      11234689999999999999999999      899999


Q ss_pred             CeeEEc----------------------------cCCccccEEeecCCCeeeCCC--C------hHHHHHhhhHHHHHHH
Q 023465          204 TPAAIM----------------------------TFGSYAEFTMVPSKHILPVAR--P------DPEVVAMLTSGLTASI  247 (282)
Q Consensus       204 d~V~~~----------------------------~~G~~ae~~~v~~~~~~~~p~--~------~~~~a~l~~~~~ta~~  247 (282)
                      |||++.                            ..|+|+||+++|++.++++|+  +      +.++|+++++++|||+
T Consensus       123 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~  202 (404)
T 3ip1_A          123 EPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYN  202 (404)
T ss_dssp             CEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHH
T ss_pred             CEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHH
Confidence            999984                            269999999999999999998  2      4678999999999999


Q ss_pred             HHH-H-hCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 ALE-Q-AGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l~-~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++. + +++++||+|||+|+ |++|++++|+||++
T Consensus       203 al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~  236 (404)
T 3ip1_A          203 AVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHA  236 (404)
T ss_dssp             HHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             HHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc
Confidence            994 4 47899999999998 99999999999975

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=1.7e-28  Score=239.67  Aligned_cols=133  Identities=21%  Similarity=0.212  Sum_probs=124.3

Q ss_pred             CCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEeecC
Q 023465          144 VQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPS  222 (282)
Q Consensus       144 ~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~v~~  222 (282)
                      .|.|+++||+|||++ ++|++|.+...|.+    +.|.++|||++|+|+++|++|++|++||||++...|+|+||+++|+
T Consensus       233 ~~~~~~~eVlV~V~a~gin~~D~~~~~G~~----~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~G~~ae~~~v~~  308 (795)
T 3slk_A          233 TAPLGDGEVRIAMRAAGVNFRDALIALGMY----PGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADH  308 (795)
T ss_dssp             HSCCCSSEEEEEEEEEEECHHHHHHTTTCC----SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEECCSSCSSSEEEEET
T ss_pred             CCCCCCCEEEEEEEEEccCHHHHHHHcCCC----CCCccccceeEEEEEEeCCCCCcCCCCCEEEEEecCCCcCEEEeeh
Confidence            467899999999999 99999999887754    3466899999999999999999999999999999999999999999


Q ss_pred             CCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          223 KHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       223 ~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++++|+  +++++|+++++++|||+++ +.+++++||+|||+|++|++|++++|+||++
T Consensus       309 ~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~  369 (795)
T 3slk_A          309 RMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL  369 (795)
T ss_dssp             TSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHT
T ss_pred             HHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence            99999999  8999999999999999998 7789999999999999999999999999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.95  E-value=8.5e-28  Score=213.51  Aligned_cols=137  Identities=18%  Similarity=0.167  Sum_probs=118.9

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCC----ceEEEEEeCCCCCCCCCCCeeEEccCC
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFE----AVGLIAAVGDSVNNVKVGTPAAIMTFG  212 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e----~~G~V~~vG~~v~~~~~Gd~V~~~~~G  212 (282)
                      ...++|.|+|+++||||||++ ++|++|.....+..  ...+|.++|||    ++|+|++.  +|++|++||||++.  |
T Consensus        27 ~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~--~~~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~~~--G  100 (336)
T 4b7c_A           27 SFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR--SYIPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYVNGA--L  100 (336)
T ss_dssp             EEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC--CSSCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEEEEE--C
T ss_pred             EEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc--ccCCCCCCCcccCCceEEEEEec--CCCCCCCCCEEecc--C
Confidence            345677899999999999999 99999977665432  23457777777    79999994  58999999999975  9


Q ss_pred             ccccEEeecCCCeeeCCC--ChHHH--HHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          213 SYAEFTMVPSKHILPVAR--PDPEV--VAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       213 ~~ae~~~v~~~~~~~~p~--~~~~~--a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|+||+++|++.++++|+  ++.++  |+++++++|||+++ +++++++|++|||+|++|++|++++|+|+++
T Consensus       101 ~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~  173 (336)
T 4b7c_A          101 GVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK  173 (336)
T ss_dssp             CSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             CceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC
Confidence            999999999999999998  45665  78999999999999 7788999999999999999999999999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.95  E-value=6.6e-28  Score=215.96  Aligned_cols=138  Identities=16%  Similarity=0.107  Sum_probs=121.5

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccC----CCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCc
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSD----GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGS  213 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~----~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~  213 (282)
                      .++|.|.| +++||||||++ ++|+.|.+...+    .+..+..+|.++|||++|+|++  ++|++|++||||++.. |+
T Consensus        32 ~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~~-G~  108 (357)
T 2zb4_A           32 EEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSFY-WP  108 (357)
T ss_dssp             EEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEEE-EE
T ss_pred             EeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEEEe--cCCCCCCCCCEEEecC-CC
Confidence            46677888 99999999999 999999776554    2222446789999999999999  8999999999999864 89


Q ss_pred             cccEEeecCCCeeeCCC-C-----hHHHHHhhhHHHHHHHHH-HHhCCCCC--CEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPSKHILPVAR-P-----DPEVVAMLTSGLTASIAL-EQAGPASG--KKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~~~~~~~p~-~-----~~~~a~l~~~~~ta~~~l-~~~~~~~g--~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+||+++|++.++++|+ -     +.++|+++++++|||+++ +.+++++|  ++|||+|++|++|++++|+|+++
T Consensus       109 ~aey~~v~~~~~~~iP~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~  184 (357)
T 2zb4_A          109 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL  184 (357)
T ss_dssp             SBSEEEEEGGGCEECCGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT
T ss_pred             cEEEEEEchHHceecCcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC
Confidence            99999999999999998 3     456788999999999999 78899999  99999999999999999999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.94  E-value=2.1e-27  Score=207.98  Aligned_cols=128  Identities=34%  Similarity=0.379  Sum_probs=116.2

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFT  218 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~  218 (282)
                      ++|.|+|+++||||||++ ++|++|.+...|.+.....+|.++|||++|+|+           ||||++.. .|+|+||+
T Consensus        17 ~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------GdrV~~~~~~G~~aey~   85 (302)
T 1iz0_A           17 DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERV   85 (302)
T ss_dssp             ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------TEEEEEECSSCCSBSEE
T ss_pred             ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------CcEEEEecCCcceeeEE
Confidence            667788999999999999 999999998887654334689999999999997           99999875 59999999


Q ss_pred             eecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|++.++++|+  +++++|+++++++|||+++. .+ +++|++|||+|++|++|++++|+|+++
T Consensus        86 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~  149 (302)
T 1iz0_A           86 AVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAM  149 (302)
T ss_dssp             EEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHT
T ss_pred             EEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHC
Confidence            999999999999  78889999999999999995 56 999999999999999999999999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.94  E-value=4.9e-27  Score=211.03  Aligned_cols=135  Identities=13%  Similarity=0.104  Sum_probs=115.8

Q ss_pred             ccccCCCCCC-CcEEEEEEc-cccccccccccC--CCCCCCCC---CCcccCCceEEEEEeCCCCCCCCCCCeeEEc---
Q 023465          140 LNLNVQLPES-FEKLLWIYG-QVNFSSGRYFSD--GNDIGSRL---PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM---  209 (282)
Q Consensus       140 ~~~~~p~~~~-~~vlv~v~~-~~~~~d~~~~~~--~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---  209 (282)
                      .++|.|+|++ +||||||++ ++|++|.+...|  .+. ...+   |.++|||++|+|++  ++ ++|++||||++.   
T Consensus        16 ~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~~~p~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~   91 (366)
T 2cdc_A           16 KDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS-TLPKGKDFLVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRR   91 (366)
T ss_dssp             EECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--CC-SSCCTTCEEEECSEE
T ss_pred             EECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC-CCCcCCCCCcCCcceEEEEEe--CC-CCCCCCCEEEEcCCC
Confidence            4667788899 999999999 999999998877  432 2356   99999999999999  77 999999999973   


Q ss_pred             ----------------------------cCCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHH-----HhCCC
Q 023465          210 ----------------------------TFGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALE-----QAGPA  255 (282)
Q Consensus       210 ----------------------------~~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~-----~~~~~  255 (282)
                                                  ..|+||||+++|++.++++|+ -+ +.|+++++++|||++++     +++++
T Consensus        92 ~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~ta~~al~~~~~~~~~~~  170 (366)
T 2cdc_A           92 GCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVP  170 (366)
T ss_dssp             CCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHHHHHHHHHHHHHHGGGSS
T ss_pred             CCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHHHHHHHHHhhhhcccCcc
Confidence                                        359999999999999999999 23 55678999999999997     77888


Q ss_pred             --C-------CCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 --S-------GKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 --~-------g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                        +       |++|||+|+ |++|++++|+|+++
T Consensus       171 ~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~  203 (366)
T 2cdc_A          171 VWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTY  203 (366)
T ss_dssp             CCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHH
T ss_pred             ccccccccCCCCEEEEECC-CHHHHHHHHHHHhC
Confidence              8       999999999 99999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.92  E-value=4.8e-26  Score=192.36  Aligned_cols=112  Identities=21%  Similarity=0.244  Sum_probs=99.2

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HHH----
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KFI----   73 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~~----   73 (282)
                      |++++++|+||||||.++..+.++...|++||+|+.+|||+|+. |+++|||||+|+||+++|+|......  +..    
T Consensus       125 m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~  204 (247)
T 4hp8_A          125 LLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAIL  204 (247)
T ss_dssp             HHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHH
T ss_pred             HHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHH
Confidence            44555579999999999999999999999999999999999999 99999999999999999999865421  111    


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        .+++|+.+|||++++++||+|+++++.||..+..||++.
T Consensus       205 ~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          205 ERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             TTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcccc
Confidence              167899999999999999999999999999999999963

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.92  E-value=4.6e-25  Score=195.64  Aligned_cols=132  Identities=18%  Similarity=0.078  Sum_probs=113.9

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEE
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFT  218 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~  218 (282)
                      .+++.|+|+++||||||++ ++|+.|..+     ..+..+|.++|||++|+|++.  +|++|++||||++.  |+|+||+
T Consensus        29 ~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-----~~~~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~--g~~aey~   99 (333)
T 1v3u_A           29 KTVELPPLKNGEVLLEALFLSVDPYMRIA-----SKRLKEGAVMMGQQVARVVES--KNSAFPAGSIVLAQ--SGWTTHF   99 (333)
T ss_dssp             EEEECCCCCTTCEEEEEEEEECCTHHHHH-----TTTCCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEEC--CCSBSEE
T ss_pred             EeCCCCCCCCCEEEEEEEEeccCHHHccc-----cCcCCCCcccccceEEEEEec--CCCCCCCCCEEEec--CceEEEE
Confidence            4567788999999999999 999887532     123467889999999999995  68899999999976  8999999


Q ss_pred             eecCCCeeeCCCC------hHH-HHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          219 MVPSKHILPVARP------DPE-VVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       219 ~v~~~~~~~~p~~------~~~-~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++|++.++++|++      +.+ +|+++++++|||+++ +.+++++|++|||+|++|++|++++|++++.
T Consensus       100 ~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~  169 (333)
T 1v3u_A          100 ISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK  169 (333)
T ss_dssp             EESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHT
T ss_pred             EechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHC
Confidence            9999999999983      345 588999999999999 6678899999999999999999999999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.92  E-value=4.8e-25  Score=196.39  Aligned_cols=137  Identities=16%  Similarity=0.177  Sum_probs=113.6

Q ss_pred             cccCCC-CCCCcEEEEEEc-cccccccccccCCCCCC---CCCCCcccCCceEEEEE--eCCCCCCCCCCCeeEEccCCc
Q 023465          141 NLNVQL-PESFEKLLWIYG-QVNFSSGRYFSDGNDIG---SRLPFDAGFEAVGLIAA--VGDSVNNVKVGTPAAIMTFGS  213 (282)
Q Consensus       141 ~~~~p~-~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~---~~~p~~~G~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~G~  213 (282)
                      +++.|. |+++||||||++ ++|+.|. ...+.+...   ..+|+++|||++|++++  +|++|++|++||||++.  |+
T Consensus        29 ~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~--g~  105 (345)
T 2j3h_A           29 TVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGI--VA  105 (345)
T ss_dssp             EEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEE--EE
T ss_pred             ecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceEEEEEecCCCCCCCCCEEEee--cC
Confidence            556675 899999999999 8877763 333432111   24689999999999999  99999999999999876  89


Q ss_pred             cccEEeecCCC--eeeCCC---C-hHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          214 YAEFTMVPSKH--ILPVAR---P-DPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       214 ~ae~~~v~~~~--~~~~p~---~-~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |+||++++++.  ++++|+   + +.++|+++++++|||+++ +.+++++|++|||+|++|++|++++|+|+++
T Consensus       106 ~aey~~v~~~~~~~~~ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~  179 (345)
T 2j3h_A          106 WEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMM  179 (345)
T ss_dssp             SBSEEEECCCTTTCEEECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             ceeEEEecccccceeecCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHC
Confidence            99999999876  999985   2 235788999999999999 6688899999999999999999999999975

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.91  E-value=2.7e-25  Score=187.39  Aligned_cols=105  Identities=26%  Similarity=0.370  Sum_probs=92.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~~~~   77 (282)
                      +|+||||||.++..+.++...|++||+|+.+|||+|+. |+++|||||+|+||+++|+|.....  ++    +.  .+++
T Consensus       126 ~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg  205 (242)
T 4b79_A          126 GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA  205 (242)
T ss_dssp             CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC
T ss_pred             CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC
Confidence            59999999999999999999999999999999999999 9999999999999999999975432  11    11  2778


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+.+|||++++++||+|+++++.||..+..||++
T Consensus       206 R~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          206 RWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCceEEECccH
Confidence            9999999999999999999999999999999996

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.90  E-value=6.6e-25  Score=186.83  Aligned_cols=111  Identities=24%  Similarity=0.288  Sum_probs=98.7

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HH-----
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KF-----   72 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~-----   72 (282)
                      |++++++|+|||+||.++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|.....+  +.     
T Consensus       132 m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~  211 (255)
T 4g81_D          132 MIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVK  211 (255)
T ss_dssp             HHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHH
T ss_pred             HHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHH
Confidence            34455679999999999999999999999999999999999999 99999999999999999999765321  11     


Q ss_pred             -HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 -IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 -~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       ..+++|+.+|||+++.++||+|+++++.||..+..||++
T Consensus       212 ~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          212 SSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence             127789999999999999999999999999999999996

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.90  E-value=1.3e-24  Score=184.97  Aligned_cols=112  Identities=26%  Similarity=0.358  Sum_probs=97.5

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HH-
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SK-   71 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~-   71 (282)
                      |++++ +|+||||||.++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|.....       .. 
T Consensus       131 m~~~~-~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~  209 (254)
T 4fn4_A          131 MLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL  209 (254)
T ss_dssp             HHHHT-CEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHH
T ss_pred             HHHcC-CcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHH
Confidence            34444 69999999999999999999999999999999999999 9999999999999999999864321       11 


Q ss_pred             --HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 --FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 --~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        ...+++|+.+|||+|+.++||+|+++++.||..+..||++..
T Consensus       210 ~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          210 TKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             HHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence              112568899999999999999999999999999999999753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.89  E-value=1e-23  Score=180.33  Aligned_cols=108  Identities=19%  Similarity=0.134  Sum_probs=97.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~~   76 (282)
                      ++|+|||+||.++..+.++...|++||+|+.+|||+|+. |+++|||||+|+||+++|+|.....  ++    +  ..++
T Consensus       138 ~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl  217 (256)
T 4fs3_A          138 EGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPL  217 (256)
T ss_dssp             TCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT
T ss_pred             cCCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCC
Confidence            359999999999999999999999999999999999999 9999999999999999999975432  11    1  1277


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +|..+|||+++.++||+|+++++.||..+..||++..
T Consensus       218 ~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          218 KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHHh
Confidence            8999999999999999999999999999999999754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.88  E-value=2.6e-23  Score=178.02  Aligned_cols=106  Identities=21%  Similarity=0.331  Sum_probs=93.5

Q ss_pred             CCcEEEEEcCCCccCCCC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH------------
Q 023465            6 KPGVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK------------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~------------   71 (282)
                      ++|+|||+||.++..+.| +...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|.....+.            
T Consensus       130 ~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  209 (261)
T 4h15_A          130 GSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGG  209 (261)
T ss_dssp             TCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             CCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhH
Confidence            469999999999998876 679999999999999999999 999999999999999999987543211            


Q ss_pred             --HH------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 --FI------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 --~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        ..      .+++|+.+|||+|+.++||+|+++++.||..+..||++
T Consensus       210 ~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          210 KKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence              10      16788999999999999999999999999999999996

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=2.7e-23  Score=177.46  Aligned_cols=107  Identities=21%  Similarity=0.300  Sum_probs=92.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------H----HH--
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------K----FI--   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~----~~--   73 (282)
                      +|+||||||.++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|......      +    ..  
T Consensus       132 ~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  211 (258)
T 4gkb_A          132 RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK  211 (258)
T ss_dssp             TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTT
T ss_pred             CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhc
Confidence            48999999999999999999999999999999999999 99999999999999999999754311      1    11  


Q ss_pred             hhh-CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 DLM-GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .++ +|+.+|||+|+.++||+|+++++.||..+..||++..
T Consensus       212 ~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T~  252 (258)
T 4gkb_A          212 VPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYTH  252 (258)
T ss_dssp             CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcch
Confidence            145 4789999999999999999999999999999999743

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.87  E-value=8.3e-23  Score=175.48  Aligned_cols=106  Identities=27%  Similarity=0.265  Sum_probs=91.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------H----HH--
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------S----KF--   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~----~~--   72 (282)
                      +|+|||+||.++..+.|+...|++||+|+.+|||+|+. |+++|||||+|+||+++|++.....       +    .+  
T Consensus       152 ~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  231 (273)
T 4fgs_A          152 GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAA  231 (273)
T ss_dssp             EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHH
T ss_pred             CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHh
Confidence            48999999999999999999999999999999999999 9999999999999999999864331       1    11  


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+++|+.+|||+|++++||+|+++++.||..+..||++.
T Consensus       232 ~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          232 QVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcChh
Confidence            1267899999999999999999999999999999999963

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.87  E-value=1.9e-22  Score=170.93  Aligned_cols=104  Identities=18%  Similarity=0.223  Sum_probs=91.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh--hhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID--LMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.++...|++||+|+.+|||+|+. +++ |||||+|+||+++|++.....++...  +++|..+||
T Consensus       125 ~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pe  203 (247)
T 3ged_A          125 KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPK  203 (247)
T ss_dssp             TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHH
T ss_pred             CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHH
Confidence            48999999999999999999999999999999999998 987 99999999999999998765554433  788999999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      |+|++++||+|+  ++.||..+..||++..
T Consensus       204 diA~~v~fL~s~--~~iTG~~i~VDGG~s~  231 (247)
T 3ged_A          204 DISNMVLFLCQQ--DFITGETIIVDGGMSK  231 (247)
T ss_dssp             HHHHHHHHHHHC--SSCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhC--CCCCCCeEEECcCHHH
Confidence            999999999984  5899999999999643

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.79  E-value=8e-20  Score=156.81  Aligned_cols=109  Identities=17%  Similarity=0.153  Sum_probs=95.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----------HHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----------KFI   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----------~~~   73 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++......          .+.
T Consensus       136 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  215 (265)
T 3lf2_A          136 RADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWT  215 (265)
T ss_dssp             STTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHH
T ss_pred             cCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHH
Confidence            3469999999999999999999999999999999999998 99999999999999999998754321          111


Q ss_pred             --------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 --------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 --------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                              .++++..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       216 ~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          216 AQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence                    3567889999999999999999999999999999999754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.79  E-value=2.5e-19  Score=153.13  Aligned_cols=111  Identities=17%  Similarity=0.124  Sum_probs=96.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H----H--Hhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K----F--IDL   75 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~----~--~~~   75 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|......  +    .  ..+
T Consensus       131 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  210 (258)
T 3oid_A          131 NGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP  210 (258)
T ss_dssp             TTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT
T ss_pred             cCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC
Confidence            3468999999999999999999999999999999999998 99999999999999999998764321  1    1  125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +++..+|+|++++++||+++.+.+.+|..+..||++....
T Consensus       211 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  250 (258)
T 3oid_A          211 AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV  250 (258)
T ss_dssp             TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBC
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCCC
Confidence            6788999999999999999999999999999999975533

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.78  E-value=9.1e-20  Score=154.97  Aligned_cols=107  Identities=24%  Similarity=0.327  Sum_probs=94.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....++..      .+.++
T Consensus       133 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r  212 (248)
T 3op4_A          133 RQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGR  212 (248)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCS
T ss_pred             CCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCC
Confidence            458999999999999999999999999999999999998 99999999999999999999764432221      25577


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++++.+.+|..+..||++.
T Consensus       213 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          213 LGDPREIASAVAFLASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence            8899999999999999999999999999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.78  E-value=2.7e-19  Score=153.28  Aligned_cols=113  Identities=20%  Similarity=0.123  Sum_probs=97.2

Q ss_pred             CCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhC
Q 023465            6 KPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~   77 (282)
                      +.|+|||+||.++. .+.++...|++||+|+++|+++++. ++++|||||+|+||+++|++.....++...      +++
T Consensus       138 ~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~  217 (262)
T 3pk0_A          138 GSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAG  217 (262)
T ss_dssp             SSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTS
T ss_pred             CCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCC
Confidence            35899999999986 7889999999999999999999998 999999999999999999987544332221      556


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCch
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSE  118 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~pq  118 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++.....++
T Consensus       218 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  258 (262)
T 3pk0_A          218 ALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPESLD  258 (262)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCSSGG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecCcchh
Confidence            78899999999999999999999999999999976644443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.78  E-value=2.6e-19  Score=153.73  Aligned_cols=109  Identities=32%  Similarity=0.427  Sum_probs=94.8

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--h
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--D   74 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~   74 (282)
                      ++.+|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....  ++    ..  .
T Consensus       147 ~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  226 (266)
T 4egf_A          147 AGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI  226 (266)
T ss_dssp             HTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTC
T ss_pred             cCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcC
Confidence            33368999999999999999999999999999999999998 9999999999999999999875431  11    11  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++++..+|+|++++++||+++++.+.+|..+..||++.
T Consensus       227 p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          227 PLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            56778899999999999999999999999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.77  E-value=3.5e-19  Score=155.07  Aligned_cols=114  Identities=22%  Similarity=0.144  Sum_probs=98.9

Q ss_pred             CCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhC
Q 023465            6 KPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~   77 (282)
                      +.|+|||+||.++. .+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|++.....++..      .+++
T Consensus       169 ~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~  248 (293)
T 3rih_A          169 GRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMG  248 (293)
T ss_dssp             SSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTS
T ss_pred             CCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCC
Confidence            35899999999996 7889999999999999999999998 99999999999999999998755433222      1557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCchh
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEE  119 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~pq~  119 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++...+.|+.
T Consensus       249 r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~  290 (293)
T 3rih_A          249 MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPDA  290 (293)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBSSGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCCCCCC
Confidence            788999999999999999999999999999999877666654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.77  E-value=1.3e-19  Score=154.00  Aligned_cols=108  Identities=24%  Similarity=0.292  Sum_probs=94.6

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----H---Hhhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----F---IDLM   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~---~~~~   76 (282)
                      +..|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|++.....+.    .   ..++
T Consensus       130 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  209 (247)
T 3rwb_A          130 GKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAM  209 (247)
T ss_dssp             TCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSS
T ss_pred             CCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhccccc
Confidence            3368999999999999999999999999999999999998 999999999999999999987543221    1   1356


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++..+|||+++.++||+++++.+.+|..+..||++.
T Consensus       210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            778899999999999999999999999999999863

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.77  E-value=2.8e-19  Score=154.36  Aligned_cols=110  Identities=25%  Similarity=0.249  Sum_probs=93.0

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HH
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SK   71 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~   71 (282)
                      ++..|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....           ++
T Consensus       150 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  229 (277)
T 3tsc_A          150 GGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ  229 (277)
T ss_dssp             HTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG
T ss_pred             cCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH
Confidence            33368999999999999999999999999999999999998 9999999999999999999965311           01


Q ss_pred             HHh-----hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 FID-----LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~~~-----~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ...     ...+..+|||+++.++||+++++.+.+|..+..||++..
T Consensus       230 ~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          230 LSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             GTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            000     012567999999999999999999999999999999654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.77  E-value=4.1e-19  Score=153.97  Aligned_cols=109  Identities=23%  Similarity=0.219  Sum_probs=92.9

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------------
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------------   69 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------------   69 (282)
                      ++.+|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....             
T Consensus       154 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (286)
T 3uve_A          154 GGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPG  233 (286)
T ss_dssp             HTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             CCCCcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccc
Confidence            33368999999999999999999999999999999999998 9999999999999999999874311             


Q ss_pred             -HHHHh-------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           70 -SKFID-------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        70 -~~~~~-------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                       .+...       ...++.+|+|++++++||+++++.+.+|..+..||++.
T Consensus       234 ~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          234 PDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence             00000       01567899999999999999999999999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.77  E-value=2.4e-19  Score=154.03  Aligned_cols=107  Identities=24%  Similarity=0.294  Sum_probs=88.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....++..      .++++
T Consensus       151 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r  230 (266)
T 3grp_A          151 RYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKR  230 (266)
T ss_dssp             TCEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCS
T ss_pred             CCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCC
Confidence            458999999999999999999999999999999999998 99999999999999999999765433322      15678


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|||++++++||+++++.+.+|..+..||++.
T Consensus       231 ~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          231 MGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            8899999999999999999999999999999864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.77  E-value=5.9e-19  Score=154.02  Aligned_cols=110  Identities=25%  Similarity=0.304  Sum_probs=93.3

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------------
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------------   69 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------------   69 (282)
                      ++++.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|+|.....            
T Consensus       166 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  245 (299)
T 3t7c_A          166 AGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP  245 (299)
T ss_dssp             HTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSC
T ss_pred             hcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccc
Confidence            334468999999999999999999999999999999999998 9999999999999999999864311            


Q ss_pred             --HH------HHh-hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           70 --SK------FID-LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        70 --~~------~~~-~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        ..      ... ...+..+|+|+|++++||+++++.+.+|..+..||++.
T Consensus       246 ~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          246 TVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             CHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence              00      000 01567899999999999999999999999999999864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.77  E-value=4.3e-19  Score=151.49  Aligned_cols=108  Identities=23%  Similarity=0.230  Sum_probs=94.3

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHHH------hhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKFI------DLM   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~~------~~~   76 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|++..... ++..      .++
T Consensus       137 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~  216 (256)
T 3gaf_A          137 AGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL  216 (256)
T ss_dssp             TTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT
T ss_pred             cCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999999998 9999999999999999999875431 1111      256


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++..+|+|+++.++||+++.+.+.+|..+..||+..
T Consensus       217 ~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          217 GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcc
Confidence            778999999999999999999999999999999853

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.77  E-value=3.5e-19  Score=157.52  Aligned_cols=110  Identities=18%  Similarity=0.054  Sum_probs=95.7

Q ss_pred             cEEEEEcCCCccCCCCCCh-hhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhh---------------
Q 023465            8 GVIINMGSSAGLYPMYNDP-IYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVA---------------   69 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~-~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~---------------   69 (282)
                      |+|||+||.++..+.++.. .|++||+|+++|+++|+. +++ +||+||+|+||+|+|+|.....               
T Consensus       165 g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  244 (329)
T 3lt0_A          165 SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKN  244 (329)
T ss_dssp             EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------------
T ss_pred             CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccccccccc
Confidence            8999999999999999996 999999999999999998 988 8999999999999999976431               


Q ss_pred             ----------------------------------HHH--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           70 ----------------------------------SKF--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        70 ----------------------------------~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                                                        ...  ..++++..+|+|+|+.++||+++.+.+.||..+..||++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          245 RNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             ---------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcCCeeE
Confidence                                              011  12567889999999999999999999999999999999876


Q ss_pred             ccCc
Q 023465          114 WPTS  117 (282)
Q Consensus       114 ~p~p  117 (282)
                      +..|
T Consensus       325 ~~~p  328 (329)
T 3lt0_A          325 MFLP  328 (329)
T ss_dssp             CSSC
T ss_pred             EecC
Confidence            5443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.76  E-value=1e-18  Score=152.26  Aligned_cols=109  Identities=13%  Similarity=0.112  Sum_probs=95.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H------HHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K------FIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~------~~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++......  +      ...+++
T Consensus       161 ~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  240 (296)
T 3k31_A          161 GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR  240 (296)
T ss_dssp             CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999998 99999999999999999998653321  1      112567


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +..+|||++++++||+++.+.+.+|..+..||++....
T Consensus       241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~  278 (296)
T 3k31_A          241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVG  278 (296)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccC
Confidence            88999999999999999999999999999999976543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.76  E-value=3e-19  Score=153.73  Aligned_cols=107  Identities=23%  Similarity=0.273  Sum_probs=94.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....++..      .++++
T Consensus       155 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r  234 (270)
T 3ftp_A          155 RGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGR  234 (270)
T ss_dssp             TCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCS
T ss_pred             CCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCC
Confidence            458999999999999999999999999999999999998 99999999999999999999765433222      14567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|||++++++||+++.+.+.+|..+..||++.
T Consensus       235 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          235 LGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcc
Confidence            8899999999999999999999999999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.76  E-value=7.1e-19  Score=152.06  Aligned_cols=107  Identities=29%  Similarity=0.378  Sum_probs=93.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKFI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~~   73 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....           ++..
T Consensus       153 ~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  232 (279)
T 3sju_A          153 GWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVH  232 (279)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHH
T ss_pred             CCcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHH
Confidence            458999999999999999999999999999999999998 9999999999999999999875421           1111


Q ss_pred             ------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 ------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                            .++++..+|||+|+.++||+++++.+.+|..+..||++.
T Consensus       233 ~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          233 ERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence                  145678999999999999999999999999999999864

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.76  E-value=3.2e-19  Score=151.31  Aligned_cols=107  Identities=24%  Similarity=0.313  Sum_probs=94.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++..      .++.+
T Consensus       132 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r  211 (246)
T 3osu_A          132 RSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLAR  211 (246)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCS
T ss_pred             CCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCC
Confidence            458999999999999999999999999999999999998 99999999999999999998754433222      25677


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|++++++||+++++.+.+|..+..+|++.
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            8899999999999999998899999999898853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.76  E-value=3.9e-19  Score=153.42  Aligned_cols=106  Identities=22%  Similarity=0.238  Sum_probs=92.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH---H----HH--h-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS---K----FI--D-   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~---~----~~--~-   74 (282)
                      +.|+|||+||.++..+.+....|++||+|+++|+++|+. ++++||+||+|+||+++|++......   +    ..  . 
T Consensus       159 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  238 (275)
T 4imr_A          159 KWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN  238 (275)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS
T ss_pred             CCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC
Confidence            458999999999999888889999999999999999998 99999999999999999998754311   1    11  1 


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++++..+|||+++.++||+++++.+.+|..+..||++
T Consensus       239 p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          239 WMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             TTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             ccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            5678899999999999999999999999999989874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.76  E-value=7.1e-19  Score=150.33  Aligned_cols=108  Identities=26%  Similarity=0.173  Sum_probs=93.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-----------hHHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-----------ASKF   72 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-----------~~~~   72 (282)
                      +.+|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++....           ..+.
T Consensus       132 ~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  211 (259)
T 4e6p_A          132 GRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEK  211 (259)
T ss_dssp             TSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHH
T ss_pred             CCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHH
Confidence            3368999999999999999999999999999999999998 999999999999999999986543           1111


Q ss_pred             ------HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 ------IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                            ..+++++.+|+|++++++||+++++.+.+|..+..||+..
T Consensus       212 ~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~  257 (259)
T 4e6p_A          212 KRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNW  257 (259)
T ss_dssp             HHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChh
Confidence                  1256788999999999999999999999999999898854

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.76  E-value=5.9e-19  Score=152.88  Aligned_cols=108  Identities=19%  Similarity=0.190  Sum_probs=92.7

Q ss_pred             CCcEEEEEcCCCccC--CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH--------
Q 023465            6 KPGVIINMGSSAGLY--PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF--------   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~--~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~--------   72 (282)
                      +.|+|||+||.++..  +.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....  .+.        
T Consensus       156 ~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  235 (283)
T 3v8b_A          156 GGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEW  235 (283)
T ss_dssp             TCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBC
T ss_pred             CCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhh
Confidence            468999999999977  778999999999999999999998 9999999999999999999975431  111        


Q ss_pred             ---Hhhh--CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 ---IDLM--GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 ---~~~~--~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                         ..++  ++..+|||+|++++||+++.+.+.+|..+..||++..
T Consensus       236 ~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          236 PKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             TTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             hhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCccc
Confidence               0133  6788999999999999999999999999999998643

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.75  E-value=8.1e-19  Score=151.65  Aligned_cols=110  Identities=31%  Similarity=0.312  Sum_probs=92.6

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--------HHHHh
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--------SKFID   74 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--------~~~~~   74 (282)
                      ++.+|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|++.....        +....
T Consensus       154 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  233 (280)
T 3pgx_A          154 AGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVH  233 (280)
T ss_dssp             HCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGG
T ss_pred             cCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhh
Confidence            33368999999999999999999999999999999999998 9999999999999999999865311        01111


Q ss_pred             -------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 -------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 -------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                             ...++.+|+|+|+.++||+++++.+.+|..+..||++..
T Consensus       234 ~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          234 SFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             GSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             hhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence                   012567999999999999999999999999999998644

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.75  E-value=1.6e-18  Score=149.97  Aligned_cols=107  Identities=20%  Similarity=0.231  Sum_probs=80.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-------HhhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-------IDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-------~~~~~~   78 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++.....++.       ..++++
T Consensus       163 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  242 (280)
T 4da9_A          163 SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRR  242 (280)
T ss_dssp             CEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------C
T ss_pred             CCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCC
Confidence            58999999999999999999999999999999999998 9999999999999999999975432221       235677


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.+|||++++++||+++++.+.+|..+..||++..
T Consensus       243 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          243 WGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             CBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             cCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            88999999999999999999999999999999643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.75  E-value=1.8e-18  Score=150.50  Aligned_cols=110  Identities=14%  Similarity=0.083  Sum_probs=92.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~~~   77 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....  ++    .  ..+++
T Consensus       162 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  241 (293)
T 3grk_A          162 GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR  241 (293)
T ss_dssp             CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999998 9999999999999999999865321  11    1  12567


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      +..+|+|++++++||+++.+.+.+|..+..||++.....
T Consensus       242 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccCCC
Confidence            889999999999999999999999999999999766443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.75  E-value=1.2e-18  Score=149.94  Aligned_cols=107  Identities=21%  Similarity=0.285  Sum_probs=92.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh-hhHHHH------hhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK-VASKFI------DLM   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~-~~~~~~------~~~   76 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|++... ..++..      .++
T Consensus       136 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  215 (271)
T 3tzq_B          136 AGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA  215 (271)
T ss_dssp             TTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT
T ss_pred             cCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999999998 99999999999999999998752 222211      145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++..+|+|+++.++||+++++.+.+|..+..||++
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            67889999999999999999999999999999993

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.75  E-value=7.1e-19  Score=151.62  Aligned_cols=107  Identities=24%  Similarity=0.248  Sum_probs=94.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~   76 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....  ++.      ..++
T Consensus       156 ~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  235 (273)
T 3uf0_A          156 GSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA  235 (273)
T ss_dssp             TCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT
T ss_pred             CCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC
Confidence            358999999999999999999999999999999999998 9999999999999999999875431  111      1256


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++.+|+|++++++||+++++.+.+|..+..||++.
T Consensus       236 ~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          236 GRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            788999999999999999998999999999999863

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.75  E-value=7.1e-19  Score=151.02  Aligned_cols=107  Identities=21%  Similarity=0.215  Sum_probs=93.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------H--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------K--   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~--   71 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++......           +  
T Consensus       135 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (267)
T 3t4x_A          135 KEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAE  214 (267)
T ss_dssp             TEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHH
T ss_pred             CCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHH
Confidence            458999999999999999999999999999999999998 99999999999999999997643211           1  


Q ss_pred             --HHh------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 --FID------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 --~~~------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        +..      +++++.+|||++++++||+++.+.+.+|..+..||++.
T Consensus       215 ~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          215 KRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             HHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence              111      24788999999999999999999999999999999863

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.75  E-value=9.2e-19  Score=149.48  Aligned_cols=111  Identities=24%  Similarity=0.253  Sum_probs=93.6

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc-CCCcEEEEEeCCcccCcchhhh-------hHHHH
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK-RKGIRINVLCPEFVQTEMGLKV-------ASKFI   73 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~-~~gI~v~~i~PG~v~T~~~~~~-------~~~~~   73 (282)
                      +++..|+|||+||.++..+.++...|++||+|+++|+|+|+. ++ ++|||||+|+||+++|++....       .....
T Consensus       131 ~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~  210 (257)
T 3imf_A          131 EKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTI  210 (257)
T ss_dssp             HHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHH
T ss_pred             hhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHH
Confidence            344468999999999999999999999999999999999998 87 7899999999999999964321       11111


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        .++++..+|||+++.++||+++.+.+.+|..+..||++..
T Consensus       211 ~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          211 QSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             TTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence              2567788999999999999999998999999999999644

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.75  E-value=1.5e-18  Score=149.89  Aligned_cols=109  Identities=25%  Similarity=0.338  Sum_probs=94.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HH----H-
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SK----F-   72 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~----~-   72 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....      .+    + 
T Consensus       150 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  229 (277)
T 4dqx_A          150 NGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN  229 (277)
T ss_dssp             TTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH
T ss_pred             cCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHH
Confidence            3468999999999999999999999999999999999998 9999999999999999999843221      11    1 


Q ss_pred             -HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 -IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 -~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                       ..++++..+|+|++++++||+++.+.+.+|..+..||++..
T Consensus       230 ~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          230 ARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             TTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSS
T ss_pred             hcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhh
Confidence             12457788999999999999999999999999999999654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.75  E-value=1.8e-18  Score=148.67  Aligned_cols=105  Identities=21%  Similarity=0.216  Sum_probs=87.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----HHHH--hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----SKFI--DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----~~~~--~~~~~   78 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....     +.+.  .++++
T Consensus       154 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  233 (267)
T 3u5t_A          154 GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLER  233 (267)
T ss_dssp             EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCS
T ss_pred             CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCC
Confidence            48999999999999999999999999999999999998 9999999999999999999864321     1111  25677


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+|++++||+++.+.+.+|..+..||++
T Consensus       234 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          234 LGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             CBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            889999999999999999999999999999985

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.75  E-value=1.5e-18  Score=149.93  Aligned_cols=108  Identities=25%  Similarity=0.330  Sum_probs=94.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----H--------
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----K--------   71 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----~--------   71 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+|+++. ++++||+||+|+||+++|+|......    .        
T Consensus       152 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 3gvc_A          152 RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARS  231 (277)
T ss_dssp             TTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHH
T ss_pred             cCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhh
Confidence            3469999999999999999999999999999999999998 99999999999999999998654221    0        


Q ss_pred             -HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 -FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 -~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                       ...++++..+|||++++++||+++++.+.+|..+..||++.
T Consensus       232 ~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          232 MIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             HHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcch
Confidence             13356788999999999999999999999999999999863

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=1.6e-18  Score=148.66  Aligned_cols=106  Identities=14%  Similarity=0.159  Sum_probs=93.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------HHH-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------KFI-   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~~~-   73 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++......           +.. 
T Consensus       139 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T 3ucx_A          139 KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYN  218 (264)
T ss_dssp             TCEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred             CCEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHH
Confidence            38999999999999999999999999999999999998 99999999999999999998754321           111 


Q ss_pred             -----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 -----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 -----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                           .++++..+|+|++++++||+++.+.+.+|..+..||+..
T Consensus       219 ~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          219 AAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                 145678999999999999999999999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.75  E-value=1.7e-18  Score=146.68  Aligned_cols=106  Identities=16%  Similarity=0.174  Sum_probs=92.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcch---hhhh-----HHH---H
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMG---LKVA-----SKF---I   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~---~~~~-----~~~---~   73 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.   ....     .++   .
T Consensus       125 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  204 (244)
T 1zmo_A          125 GGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRD  204 (244)
T ss_dssp             TCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHH
T ss_pred             CCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcC
Confidence            358999999999999999999999999999999999998 999999999999999999997   4321     111   1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++++..+|||+|+.++||+++.+.+.+|..+..||++
T Consensus       205 ~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          205 VPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            24567889999999999999998888899888888874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.74  E-value=1.1e-18  Score=150.26  Aligned_cols=107  Identities=23%  Similarity=0.307  Sum_probs=94.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~------~~~~   76 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|......  +.      ..++
T Consensus       153 ~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  232 (271)
T 4ibo_A          153 GYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA  232 (271)
T ss_dssp             TCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT
T ss_pred             CCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC
Confidence            358999999999999999999999999999999999998 99999999999999999999754321  11      1256


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++.+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       233 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          233 KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCee
Confidence            788999999999999999999999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.74  E-value=8.8e-19  Score=150.67  Aligned_cols=107  Identities=25%  Similarity=0.334  Sum_probs=94.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH---HhhhCCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF---IDLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~---~~~~~~~~~   81 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|+|......+.   ..++++..+
T Consensus       156 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~  235 (269)
T 4dmm_A          156 RSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGE  235 (269)
T ss_dssp             TCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBC
T ss_pred             CCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCC
Confidence            458999999999999999999999999999999999998 9999999999999999999976543221   125678899


Q ss_pred             HHHHHHHHHHhhcC-CCCceEEEEEecCCccc
Q 023465           82 MEMVVKGAFELITD-ESKAGSCLWITNRRGME  112 (282)
Q Consensus        82 ~~~~a~~~~~l~~~-~~~~~~~~~~~~~g~~~  112 (282)
                      |+|++++++||+++ .+.+.+|..+..||++.
T Consensus       236 ~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          236 AAEVAGVVRFLAADPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             HHHHHHHHHHHHHCGGGGGCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHHhCCcccCCCcCCEEEECCCee
Confidence            99999999999998 67789999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.74  E-value=3e-18  Score=148.26  Aligned_cols=110  Identities=20%  Similarity=0.208  Sum_probs=94.6

Q ss_pred             CCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh----hHHH------H
Q 023465            6 KPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV----ASKF------I   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~----~~~~------~   73 (282)
                      +.|+|||+||.++. .+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|++....    .++.      .
T Consensus       136 ~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  215 (280)
T 3tox_A          136 GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL  215 (280)
T ss_dssp             TCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTT
T ss_pred             CCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhcc
Confidence            46899999999997 6889999999999999999999998 999999999999999999986441    1111      1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      .++++..+|+|+++.++||+++.+.+.+|..+..||++....
T Consensus       216 ~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          216 HALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            245678899999999999999999999999999999976544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.74  E-value=1.4e-18  Score=149.19  Aligned_cols=107  Identities=23%  Similarity=0.288  Sum_probs=93.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------HHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------KFI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~~~   73 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|......           ...
T Consensus       144 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  223 (266)
T 3uxy_A          144 GGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG  223 (266)
T ss_dssp             TCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             CCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH
Confidence            468999999999999999999999999999999999998 99999999999999999998654221           111


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        .++++..+|||+|++++||+++.+.+.+|..+..||+..
T Consensus       224 ~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3uxy_A          224 RTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKA  264 (266)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEe
Confidence              145678899999999999999998999999999898853

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.74  E-value=1.6e-18  Score=147.98  Aligned_cols=107  Identities=22%  Similarity=0.215  Sum_probs=86.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh-C
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM-G   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~-~   77 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+++. ++++||+||+|+||+++|++.....++..+      ++ +
T Consensus       141 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~  220 (257)
T 3tpc_A          141 ERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPP  220 (257)
T ss_dssp             CCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSC
T ss_pred             CCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999999999998 999999999999999999997654333222      33 6


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                      +..+|+|+++.++||+++  .+.+|..+..||++...
T Consensus       221 r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          221 RLGRAEEYAALVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             SCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             CCCCHHHHHHHHHHHccc--CCcCCcEEEECCCccCC
Confidence            788999999999999986  57888888889997553

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.74  E-value=1.5e-18  Score=149.72  Aligned_cols=109  Identities=22%  Similarity=0.188  Sum_probs=92.5

Q ss_pred             CCCCcEEEEEcCCCccCCC--CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----Hhh
Q 023465            4 AKKPGVIINMGSSAGLYPM--YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----IDL   75 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~--~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~~~   75 (282)
                      ++.+|+|||+||.++..+.  +....|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....+..     ..+
T Consensus       158 ~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p  237 (276)
T 3r1i_A          158 QGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIP  237 (276)
T ss_dssp             HTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGST
T ss_pred             cCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCC
Confidence            3335899999999987654  3678999999999999999998 9999999999999999999976532211     125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++..+|+|++++++||+++.+.+.+|..+..||++.
T Consensus       238 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          238 LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            6788999999999999999999999999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.74  E-value=5.4e-18  Score=145.75  Aligned_cols=105  Identities=23%  Similarity=0.169  Sum_probs=91.1

Q ss_pred             CcEEEEEcCCC-ccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh------------hHHH
Q 023465            7 PGVIINMGSSA-GLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV------------ASKF   72 (282)
Q Consensus         7 ~g~Iv~isS~~-~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~------------~~~~   72 (282)
                      +|+|||+||.. +..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|....            .++.
T Consensus       145 ~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T 3is3_A          145 GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQR  224 (270)
T ss_dssp             TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHH
T ss_pred             CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHH
Confidence            58999999988 567889999999999999999999998 999999999999999999987521            1111


Q ss_pred             ------HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 ------IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                            ..++++..+|+|++++++||+++++.+.+|..+..||++
T Consensus       225 ~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          225 QQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence                  125678899999999999999999999999999989885

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.74  E-value=2e-18  Score=184.90  Aligned_cols=122  Identities=19%  Similarity=0.159  Sum_probs=108.2

Q ss_pred             CCcEEEEEEc-cccccccccccCCCCCC------CCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCccccEEee
Q 023465          149 SFEKLLWIYG-QVNFSSGRYFSDGNDIG------SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMV  220 (282)
Q Consensus       149 ~~~vlv~v~~-~~~~~d~~~~~~~~~~~------~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae~~~v  220 (282)
                      ++||+|||++ ++|+.|.+...|.++..      ...|.++|+|++|+|          ++||||++.. .|+|+||+++
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV~g~~~~G~~Aeyv~v 1628 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRVMGMVPAEGLATSVLL 1628 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCEEEECSSCCSBSEEEC
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEEEEeecCCceeeEEEc
Confidence            7899999999 99999998887754311      124678999999987          2799999876 4999999999


Q ss_pred             cCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          221 PSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       221 ~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      |++.++++|+  +++++|+++++++|||+++ +.+++++||+|||+|++|+||++++|+||++
T Consensus      1629 p~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~ 1691 (2512)
T 2vz8_A         1629 LQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSR 1691 (2512)
T ss_dssp             CGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             ccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHc
Confidence            9999999999  8999999999999999999 6788899999999999999999999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.74  E-value=2.1e-18  Score=147.15  Aligned_cols=107  Identities=22%  Similarity=0.210  Sum_probs=87.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh-
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM-   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~-   76 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....++...      ++ 
T Consensus       140 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  219 (257)
T 3tl3_A          140 EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHP  219 (257)
T ss_dssp             CCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSS
T ss_pred             CCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCC
Confidence            3468999999999999989999999999999999999998 999999999999999999997654333222      33 


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+..+|||+++.++||+++  .+.+|..+..||++..
T Consensus       220 ~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          220 SRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIRM  254 (257)
T ss_dssp             CSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC--
T ss_pred             CCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCccC
Confidence            6788999999999999986  5788888888999754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.74  E-value=1.9e-18  Score=149.44  Aligned_cols=112  Identities=15%  Similarity=0.128  Sum_probs=96.4

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--Hhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDL   75 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~   75 (282)
                      +++|+|||+||.++..+.++...|++||+|+++|+|+++. ++++|||||+|+||+++|+|.....  ++    .  ..+
T Consensus       141 ~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p  220 (281)
T 3svt_A          141 GGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP  220 (281)
T ss_dssp             TTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS
T ss_pred             cCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC
Confidence            3468999999999999999999999999999999999998 9999999999999999999975431  11    1  125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      +.+..+|+|++++++||+++.+.+.+|..+..+|+......
T Consensus       221 ~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~  261 (281)
T 3svt_A          221 LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRG  261 (281)
T ss_dssp             SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCC
T ss_pred             CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccC
Confidence            67889999999999999999988999999999999765433

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.73  E-value=2.3e-18  Score=148.96  Aligned_cols=107  Identities=24%  Similarity=0.333  Sum_probs=89.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-------------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-------------   71 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++.....+.             
T Consensus       154 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  233 (281)
T 3v2h_A          154 GWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVI  233 (281)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------
T ss_pred             CCCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHH
Confidence            458999999999999999999999999999999999998 999999999999999999986542111             


Q ss_pred             ---H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 ---F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 ---~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                         +  ..+++++.+|+|++++++||+++++.+.+|..+..||++.
T Consensus       234 ~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          234 NEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             ------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCcc
Confidence               0  1145678899999999999999999999999999999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.73  E-value=1e-18  Score=150.84  Aligned_cols=107  Identities=18%  Similarity=0.167  Sum_probs=93.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---H----HH--Hhhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---S----KF--IDLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~----~~--~~~~   76 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++.....   +    ..  ..++
T Consensus       156 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~  235 (277)
T 4fc7_A          156 GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL  235 (277)
T ss_dssp             CEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT
T ss_pred             CCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC
Confidence            58999999999999999999999999999999999998 9999999999999999998643211   1    11  1256


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++..+|+|+++.++||+++.+.+.+|..+..||+..+
T Consensus       236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence            7889999999999999999999999999999999643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.73  E-value=5.9e-18  Score=144.37  Aligned_cols=106  Identities=24%  Similarity=0.260  Sum_probs=92.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh------hHHH------H
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV------ASKF------I   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~------~~~~------~   73 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|++....      .+++      .
T Consensus       131 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  210 (255)
T 4eso_A          131 GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNI  210 (255)
T ss_dssp             EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhcc
Confidence            48999999999999999999999999999999999998 999999999999999999986421      1111      1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .++++..+|||+|+.++||+++ +.+.+|..+..||++..
T Consensus       211 ~p~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          211 TPMKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             STTSSCBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHcCc-CcCccCCEEEECCCccc
Confidence            2567889999999999999998 88899999999999643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.73  E-value=5.4e-18  Score=143.51  Aligned_cols=105  Identities=24%  Similarity=0.268  Sum_probs=92.6

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----------HH--
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----------FI--   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----------~~--   73 (282)
                      |+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.......           ..  
T Consensus       120 g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  199 (244)
T 4e4y_A          120 ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ  199 (244)
T ss_dssp             EEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             cEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHH
Confidence            7999999999999999999999999999999999998 999999999999999999987543221           11  


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                          .++.+..+|+|+|+.++||+++++.+.+|..+..||++.
T Consensus       200 ~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          200 EEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence                145678899999999999999998899999999999864

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.73  E-value=4.6e-18  Score=146.19  Aligned_cols=107  Identities=29%  Similarity=0.297  Sum_probs=92.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKF-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~-   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. +++ +|+||+|+||+++|+|.....           ++. 
T Consensus       131 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  209 (269)
T 3vtz_A          131 GHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKI  209 (269)
T ss_dssp             TCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHH
T ss_pred             CCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHH
Confidence            358999999999999999999999999999999999998 988 899999999999999864321           111 


Q ss_pred             -----HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 -----IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 -----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                           ..++++..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       210 ~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          210 EEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccc
Confidence                 12567888999999999999999999999999999999643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.73  E-value=8.5e-18  Score=144.01  Aligned_cols=108  Identities=17%  Similarity=0.128  Sum_probs=94.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~----~--~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++......  +    .  ..++.
T Consensus       140 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  219 (266)
T 3oig_A          140 GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLR  219 (266)
T ss_dssp             CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS
T ss_pred             CceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999998 99999999999999999998754321  1    1  11456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++...
T Consensus       220 ~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          220 RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEe
Confidence            7889999999999999998889999999999997553

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=6.5e-18  Score=143.21  Aligned_cols=107  Identities=33%  Similarity=0.369  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----H--hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----I--DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----~--~~~~~   78 (282)
                      +.|+|||+||.+ ..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++.    .  .++++
T Consensus       127 ~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~  205 (245)
T 1uls_A          127 NPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGR  205 (245)
T ss_dssp             CCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCS
T ss_pred             CCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCC
Confidence            458999999998 88889999999999999999999998 9999999999999999999865432221    1  14567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ..+|+|+|+.++|++++++.+.+|..+..+|++..
T Consensus       206 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          206 AGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            88999999999999998888888888888998644

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.72  E-value=2.8e-18  Score=150.99  Aligned_cols=110  Identities=28%  Similarity=0.243  Sum_probs=92.4

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------------
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------------   69 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------------   69 (282)
                      +++.+|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....            
T Consensus       183 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (317)
T 3oec_A          183 ERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP  262 (317)
T ss_dssp             HTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred             HcCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence            344468999999999999999999999999999999999998 9999999999999999999864210            


Q ss_pred             --HHHHh---h----hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           70 --SKFID---L----MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        70 --~~~~~---~----~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        ++..+   .    ..++.+|+|++++++||+++++.+.+|..+..||++.
T Consensus       263 ~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          263 TREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             chhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence              00000   0    1456799999999999999999999999999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.72  E-value=5.9e-18  Score=145.68  Aligned_cols=105  Identities=22%  Similarity=0.196  Sum_probs=90.9

Q ss_pred             CcEEEEEcCCCccCC-CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HHH--HhhhCCC
Q 023465            7 PGVIINMGSSAGLYP-MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SKF--IDLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~~--~~~~~~~   79 (282)
                      .|+|||+||..+... .++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|.....   +..  ..++++.
T Consensus       158 ~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~  237 (271)
T 3v2g_A          158 GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSY  237 (271)
T ss_dssp             TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSC
T ss_pred             CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCC
Confidence            589999999877654 78999999999999999999998 9999999999999999999874321   111  1256788


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+|||+++.++||+++.+.+.+|..+..||++
T Consensus       238 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          238 GEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            99999999999999999999999999999985

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.72  E-value=4.3e-18  Score=147.11  Aligned_cols=108  Identities=20%  Similarity=0.221  Sum_probs=92.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--------------H
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--------------S   70 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--------------~   70 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....              .
T Consensus       149 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (281)
T 3s55_A          149 NYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLK  228 (281)
T ss_dssp             TCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHH
T ss_pred             CCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchh
Confidence            358999999999999999999999999999999999998 9999999999999999999864210              0


Q ss_pred             HHH-------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           71 KFI-------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        71 ~~~-------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ...       ....++.+|+|++++++||+++.+.+.+|..+..||++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          229 DVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             HHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            000       0125678999999999999999999999999999998643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.72  E-value=4.6e-18  Score=144.81  Aligned_cols=107  Identities=22%  Similarity=0.272  Sum_probs=94.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....++..      .++.+
T Consensus       141 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T 3ezl_A          141 GWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRR  220 (256)
T ss_dssp             TCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSS
T ss_pred             CCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCC
Confidence            358999999999999999999999999999999999998 99999999999999999999765433322      24567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++++.+.+|..+..+|++.
T Consensus       221 ~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEe
Confidence            8899999999999999988899999999898864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.72  E-value=6.3e-18  Score=144.81  Aligned_cols=109  Identities=23%  Similarity=0.233  Sum_probs=89.1

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-HH------h
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-FI------D   74 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~~------~   74 (282)
                      +++..|+||++||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++....... ..      .
T Consensus       149 ~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  228 (266)
T 3o38_A          149 GVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDE  228 (266)
T ss_dssp             TSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CC
T ss_pred             hcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcC
Confidence            333568999999999999999999999999999999999998 999999999999999999997543211 11      1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++++..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       229 ~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          229 AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            4567889999999999999998889999999888874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.72  E-value=8.7e-18  Score=146.06  Aligned_cols=104  Identities=19%  Similarity=0.099  Sum_probs=91.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----H--hhhC-C
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----I--DLMG-G   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----~--~~~~-~   78 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+| . ..++.    .  .++. +
T Consensus       176 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r  253 (291)
T 1e7w_A          176 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPAVWEGHRSKVPLYQR  253 (291)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCHHHHHHHHTTCTTTTS
T ss_pred             CcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCHHHHHHHHhhCCCCCC
Confidence            58999999999999999999999999999999999998 99999999999999999999 4 21221    1  1445 7


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++.+.+.+|..+..||++.
T Consensus       254 ~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          254 DSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            8899999999999999988889999999899864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.72  E-value=3e-18  Score=147.88  Aligned_cols=110  Identities=24%  Similarity=0.217  Sum_probs=90.9

Q ss_pred             cCCCCcEEEEEcCCCccCCC----CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-H----H
Q 023465            3 AAKKPGVIINMGSSAGLYPM----YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-K----F   72 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-~----~   72 (282)
                      +++..|+|||+||.++..+.    ++...|++||+|+++|+++|+. ++++||+||+|+||+|+|+|...... +    .
T Consensus       146 ~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~  225 (278)
T 3sx2_A          146 KQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKM  225 (278)
T ss_dssp             HHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHH
T ss_pred             hCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhc
Confidence            33346899999999998776    7788999999999999999998 99999999999999999999753211 0    0


Q ss_pred             Hh-----------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 ID-----------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~~-----------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..           ...+..+|+|+|+.++||+++++.+.+|..+..||++.
T Consensus       226 ~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          226 AAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             cchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            00           00356799999999999999999999999999999863

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.72  E-value=1.8e-17  Score=143.20  Aligned_cols=110  Identities=12%  Similarity=0.066  Sum_probs=96.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~~   77 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....  ++.      ..+.+
T Consensus       158 ~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  237 (280)
T 3nrc_A          158 NASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLK  237 (280)
T ss_dssp             TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTC
T ss_pred             CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999998 9999999999999999999975432  111      12467


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      +..+|+|+|+.++||+++++.+.+|..+..||++.....
T Consensus       238 ~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~~  276 (280)
T 3nrc_A          238 KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCVSM  276 (280)
T ss_dssp             SCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGCCC
T ss_pred             CCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccccCC
Confidence            789999999999999999888999999999999766443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.72  E-value=3.7e-18  Score=146.49  Aligned_cols=108  Identities=26%  Similarity=0.263  Sum_probs=93.9

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH-----hhhC
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI-----DLMG   77 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~-----~~~~   77 (282)
                      +++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++.....+...     .++.
T Consensus       153 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~  232 (267)
T 4iiu_A          153 ARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMK  232 (267)
T ss_dssp             HTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTC
T ss_pred             cCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCC
Confidence            34568999999999999999999999999999999999998 99999999999999999999754322211     1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++
T Consensus       233 ~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          233 RMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            7889999999999999999889999999888885

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.72  E-value=8.1e-18  Score=143.60  Aligned_cols=104  Identities=24%  Similarity=0.154  Sum_probs=90.6

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHHH--
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKFI--   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~~--   73 (282)
                      |+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|+|.....           ++..  
T Consensus       134 g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T 3a28_C          134 GKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE  213 (258)
T ss_dssp             CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHH
T ss_pred             cEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHH
Confidence            8999999999999999999999999999999999998 9999999999999999999865421           1111  


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                          .++++..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       214 ~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          214 YSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence                14567889999999999999998888899888888885

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.71  E-value=5.1e-18  Score=143.79  Aligned_cols=107  Identities=26%  Similarity=0.311  Sum_probs=94.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....++...      +.++
T Consensus       132 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  211 (247)
T 3lyl_A          132 RWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQ  211 (247)
T ss_dssp             TCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCC
T ss_pred             CCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCC
Confidence            358999999999999999999999999999999999998 999999999999999999997654333221      4567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++++.+.+|..+..+|++.
T Consensus       212 ~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          212 IGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEe
Confidence            8899999999999999998889999999899864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.71  E-value=4.2e-18  Score=146.33  Aligned_cols=107  Identities=23%  Similarity=0.330  Sum_probs=92.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH-------hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI-------DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~-------~~~~   77 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....++..       .+++
T Consensus       153 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T 3gk3_A          153 RFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVG  232 (269)
T ss_dssp             TCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTS
T ss_pred             CCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcC
Confidence            358999999999999999999999999999999999998 99999999999999999999765433211       1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++.
T Consensus       233 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~  267 (269)
T 3gk3_A          233 RLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMH  267 (269)
T ss_dssp             SCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSC
T ss_pred             CccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEe
Confidence            77899999999999999999899999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.71  E-value=4.7e-18  Score=144.66  Aligned_cols=104  Identities=19%  Similarity=0.189  Sum_probs=90.1

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++ ||||+|+||+++|+|.....+.  ....+..+|+
T Consensus       142 ~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~--~~~~~~~~p~  218 (252)
T 3f1l_A          142 SDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT--EDPQKLKTPA  218 (252)
T ss_dssp             SSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT--CCGGGSBCTG
T ss_pred             CCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc--cchhccCCHH
Confidence            3468999999999999999999999999999999999998 9887 9999999999999987543221  1123567999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+++.++||+++++.+.+|..+..||+.
T Consensus       219 dva~~~~~L~s~~~~~itG~~i~vdgG~  246 (252)
T 3f1l_A          219 DIMPLYLWLMGDDSRRKTGMTFDAQPGR  246 (252)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEESSCC-
T ss_pred             HHHHHHHHHcCccccCCCCCEEEeCCCc
Confidence            9999999999999999999999999985

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.71  E-value=2.1e-17  Score=143.34  Aligned_cols=106  Identities=24%  Similarity=0.191  Sum_probs=89.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh----hHHHHh--hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV----ASKFID--LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~----~~~~~~--~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|....    .+....  ....
T Consensus       166 ~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T 3rku_A          166 NSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTT  245 (287)
T ss_dssp             TCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSC
T ss_pred             CCCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccC
Confidence            458999999999999999999999999999999999998 999999999999999999986322    111111  1123


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.+|||+|+.++||+++++.+.+|..+..+++.
T Consensus       246 p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          246 PLMADDVADLIVYATSRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             CEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred             CCCHHHHHHHHHHHhCCCCCeEecceEEeeCCC
Confidence            568999999999999999999999888877774

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.71  E-value=1e-17  Score=142.86  Aligned_cols=105  Identities=28%  Similarity=0.248  Sum_probs=91.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HH---
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SK---   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~---   71 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....           ++   
T Consensus       131 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T 1geg_A          131 GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA  210 (256)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             CCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHH
Confidence            58999999999999999999999999999999999998 9999999999999999999865321           11   


Q ss_pred             -HH--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 -FI--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 -~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       +.  .+++++.+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       211 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          211 EFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence             11  14567889999999999999998888889888888885

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.71  E-value=7.9e-18  Score=146.55  Aligned_cols=106  Identities=21%  Similarity=0.188  Sum_probs=92.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHH----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASK----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~----~--~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|++....  .++    +  ..+++
T Consensus       178 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  257 (294)
T 3r3s_A          178 GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK  257 (294)
T ss_dssp             TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTS
T ss_pred             CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999999999998 999999999999999999984221  111    1  12557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++++.+.+|..+..||++.
T Consensus       258 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  292 (294)
T 3r3s_A          258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEH  292 (294)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            78999999999999999999999999999999864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.71  E-value=2.6e-17  Score=142.14  Aligned_cols=109  Identities=19%  Similarity=0.221  Sum_probs=93.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh-
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM-   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~-   76 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....++...      ++ 
T Consensus       164 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  243 (281)
T 3ppi_A          164 GERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFP  243 (281)
T ss_dssp             SCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSS
T ss_pred             CCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCC
Confidence            4568999999999999999999999999999999999998 999999999999999999998654333221      22 


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      .+..+|||+|+.++||+++  .+.+|..+..+|++.+.|
T Consensus       244 ~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          244 KRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             CCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCcccCC
Confidence            6678999999999999985  577888888899876544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.71  E-value=1.2e-17  Score=141.67  Aligned_cols=107  Identities=26%  Similarity=0.309  Sum_probs=87.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....++..      .++++
T Consensus       134 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T 3f9i_A          134 RYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGT  213 (249)
T ss_dssp             TCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCS
T ss_pred             CCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCC
Confidence            458999999999999999999999999999999999998 99999999999999999999765433221      25567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +.+|+|+++++++|+++++.+.+|..+..+|++.
T Consensus       214 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          214 YGIPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            8899999999999999988888998888898864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.71  E-value=1.1e-17  Score=143.08  Aligned_cols=108  Identities=24%  Similarity=0.261  Sum_probs=85.7

Q ss_pred             CcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHH------HhhhC
Q 023465            7 PGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~------~~~~~   77 (282)
                      .|+|||+||.++. .+.++...|++||+|+++|+|+|+. +++. ||||+|+||+++|+|..... ++.      ..+++
T Consensus       136 ~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~  214 (259)
T 3edm_A          136 GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLK  214 (259)
T ss_dssp             EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------
T ss_pred             CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCC
Confidence            4899999999998 7889999999999999999999998 9887 99999999999999876432 111      12557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +..+|||+++.++||+++++.+.+|..+..||++..+.
T Consensus       215 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          215 REGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence            78899999999999999999999999999999975543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.70  E-value=1.5e-17  Score=142.11  Aligned_cols=107  Identities=30%  Similarity=0.325  Sum_probs=87.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------H--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------K--   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~--   71 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|+|......           +  
T Consensus       133 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T 1x1t_A          133 GFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAA  212 (260)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             CCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHH
Confidence            358999999999999999999999999999999999998 99999999999999999998643211           1  


Q ss_pred             --H-H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 --F-I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 --~-~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        + .  .+++++.+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       213 ~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          213 RELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             --CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence              1 1  145678899999999999999888888888888888853

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.70  E-value=3.2e-17  Score=140.75  Aligned_cols=106  Identities=17%  Similarity=0.152  Sum_probs=90.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-----hHH---------
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-----ASK---------   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-----~~~---------   71 (282)
                      +|+|||+||..+ .+.+....|++||+|+++|+++++. ++++|||||+|+||+++|+|....     .++         
T Consensus       141 ~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  219 (269)
T 2h7i_A          141 GGSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  219 (269)
T ss_dssp             EEEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             CCeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHH
Confidence            389999999876 6788899999999999999999998 999999999999999999986432     111         


Q ss_pred             --H--HhhhC-CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 --F--IDLMG-GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 --~--~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        +  ..+++ +..+|+|+|+.++||+++.+.+.+|..+..||++..
T Consensus       220 ~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          220 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence              1  12456 588999999999999999999999999999999654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.70  E-value=1.7e-17  Score=141.93  Aligned_cols=111  Identities=22%  Similarity=0.188  Sum_probs=91.9

Q ss_pred             CCcEEEEEcCC-Cc-cCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhh
Q 023465            6 KPGVIINMGSS-AG-LYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~-~~-~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~   76 (282)
                      +.|+|||+||. ++ ..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++.....++..      .++
T Consensus       137 ~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~  216 (264)
T 3i4f_A          137 NFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPI  216 (264)
T ss_dssp             TCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC-------
T ss_pred             CCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCC
Confidence            45899999998 44 55778889999999999999999998 99999999999999999999765443322      255


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      ++..+|+|+++.++||+++.+.+.+|..+..+|++.....
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccC
Confidence            6788999999999999999888999999999999765443

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.70  E-value=2.3e-17  Score=140.86  Aligned_cols=107  Identities=22%  Similarity=0.194  Sum_probs=84.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----HHH------Hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----SKF------IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----~~~------~~~   75 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|++.....    ++.      ..+
T Consensus       139 ~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (261)
T 3n74_A          139 ECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIP  218 (261)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CT
T ss_pred             CeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCC
Confidence            57899999999999999999999999999999999998 9999999999999999999875432    111      114


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++++.+|||+++.++||+++++.+.+|..+..+|++..
T Consensus       219 ~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          219 MGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             cCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCccc
Confidence            56788999999999999999988999999999999644

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.70  E-value=6.7e-18  Score=145.22  Aligned_cols=107  Identities=22%  Similarity=0.307  Sum_probs=89.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+||++||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++..      .++.+
T Consensus       157 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  236 (271)
T 4iin_A          157 RFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNR  236 (271)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCS
T ss_pred             CCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCC
Confidence            358999999999999999999999999999999999998 99999999999999999999765433222      14567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++++.+.+|..+..||++.
T Consensus       237 ~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          237 LGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCee
Confidence            8899999999999999998899999999999864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.70  E-value=3.3e-17  Score=140.43  Aligned_cols=107  Identities=16%  Similarity=0.145  Sum_probs=89.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~------~~~~~   77 (282)
                      .|+||++||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|......  +.      ..+++
T Consensus       146 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  225 (271)
T 3ek2_A          146 DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLK  225 (271)
T ss_dssp             EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTS
T ss_pred             CceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcC
Confidence            48999999999999999999999999999999999998 99999999999999999998754321  11      12557


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       226 ~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          226 RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence            789999999999999999888999999999999654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.70  E-value=5.5e-18  Score=145.03  Aligned_cols=105  Identities=21%  Similarity=0.244  Sum_probs=90.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-------------h--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-------------A--   69 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-------------~--   69 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++|||||+|+||+++|+|....             .  
T Consensus       135 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (262)
T 1zem_A          135 NYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTD  214 (262)
T ss_dssp             TCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSS
T ss_pred             CCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccC
Confidence            358999999999999999999999999999999999998 999999999999999999986542             1  


Q ss_pred             HH-HH------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           70 SK-FI------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        70 ~~-~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ++ ..      .++++..+|+|+++.++||+++.+.+.+|..+..||+
T Consensus       215 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          215 PKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            11 11      1557788999999999999999888888888887775

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.70  E-value=8.5e-18  Score=142.79  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=85.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh-hhh-H--HHH----hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL-KVA-S--KFI----DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~-~~~-~--~~~----~~~   76 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.. ... .  +..    .++
T Consensus       132 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  211 (249)
T 2ew8_A          132 GWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAI  211 (249)
T ss_dssp             TCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSS
T ss_pred             CCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCcc
Confidence            358999999999999999999999999999999999998 9999999999999999999865 321 1  111    245


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++.+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       212 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          212 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCcc
Confidence            667899999999999999888888888888888853

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.70  E-value=1.7e-17  Score=141.05  Aligned_cols=109  Identities=17%  Similarity=0.131  Sum_probs=93.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----H--hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----I--DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~--~~~~   77 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....++.     .  .++.
T Consensus       131 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~  210 (249)
T 1o5i_A          131 GWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR  210 (249)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS
T ss_pred             CCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCC
Confidence            358999999999999999999999999999999999998 9999999999999999999875332111     1  1446


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                      ++.+|+|+|+.++|++++.+.+.+|..+..+|++..+
T Consensus       211 ~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          211 RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            6789999999999999988888888888889886544

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.70  E-value=1.1e-17  Score=143.47  Aligned_cols=106  Identities=26%  Similarity=0.343  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh----hH--------HH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV----AS--------KF   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~----~~--------~~   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|....    .+        .+
T Consensus       143 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  222 (267)
T 1iy8_A          143 GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEF  222 (267)
T ss_dssp             TCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHH
T ss_pred             CCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHH
Confidence            358999999999999999999999999999999999998 999999999999999999986542    11        11


Q ss_pred             H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .  .++++..+|+|+++.++||+++++.+.+|..+..+|++
T Consensus       223 ~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          223 IQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             HTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            1  14567789999999999999988888888888888885

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.70  E-value=2.4e-17  Score=140.15  Aligned_cols=106  Identities=25%  Similarity=0.317  Sum_probs=92.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----H---HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----F---IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----~---~~~~~   77 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|......+     .   ..++.
T Consensus       140 ~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T 3icc_A          140 NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFN  219 (255)
T ss_dssp             EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTS
T ss_pred             CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcC
Confidence            47999999999999999999999999999999999998 999999999999999999997543211     1   12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++||+++++.+.+|..+..+|++.
T Consensus       220 ~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          220 RLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             CCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence            78899999999999999998899999999998853

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.70  E-value=7.6e-18  Score=142.78  Aligned_cols=106  Identities=22%  Similarity=0.307  Sum_probs=91.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----HH--hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----FI--DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~~--~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++    ..  .++.+
T Consensus       132 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~  211 (246)
T 2uvd_A          132 RHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQ  211 (246)
T ss_dssp             TCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCS
T ss_pred             CCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCC
Confidence            358999999999988889999999999999999999998 999999999999999999986532211    11  24567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.+|+|+++.++|++++.+.+.+|..+..+|++
T Consensus       212 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          212 FGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            889999999999999988888888888888875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.70  E-value=2e-17  Score=143.12  Aligned_cols=108  Identities=22%  Similarity=0.297  Sum_probs=90.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--------------hHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--------------ASK   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--------------~~~   71 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++ ||||+|+||+++|+|....              ...
T Consensus       134 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  212 (281)
T 3zv4_A          134 RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADM  212 (281)
T ss_dssp             TCEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHH
T ss_pred             CCeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHH
Confidence            48999999999999999999999999999999999998 9887 9999999999999986321              011


Q ss_pred             H--HhhhCCCCCHHHHHHHHHHhhc-CCCCceEEEEEecCCcccccc
Q 023465           72 F--IDLMGGFVPMEMVVKGAFELIT-DESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        72 ~--~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +  ..++++..+|+|+++.++||++ +.+.+.+|..+..||++....
T Consensus       213 ~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          213 LKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             HHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCC
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcccc
Confidence            1  1256789999999999999999 677789999999999976543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.70  E-value=1e-17  Score=145.59  Aligned_cols=106  Identities=27%  Similarity=0.190  Sum_probs=92.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHHH------hhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKFI------DLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~~------~~~~~   78 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|+|..... ++..      .++++
T Consensus       175 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  254 (291)
T 3ijr_A          175 GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQR  254 (291)
T ss_dssp             TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSS
T ss_pred             CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCC
Confidence            47999999999999999999999999999999999998 9999999999999999999865421 1111      14567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|++++++||+++++.+.+|..+..||++.
T Consensus       255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             CBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence            8899999999999999999999999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.70  E-value=1.9e-17  Score=140.49  Aligned_cols=106  Identities=25%  Similarity=0.311  Sum_probs=87.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++..      .++.+
T Consensus       131 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~  210 (247)
T 1uzm_A          131 KFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKR  210 (247)
T ss_dssp             TCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCS
T ss_pred             CCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCC
Confidence            358999999999999999999999999999999999998 99999999999999999998654322211      14467


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.++|++++++.+.+|..+..+|++
T Consensus       211 ~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          211 VGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            889999999999999988888888888888885

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.70  E-value=3.4e-18  Score=146.40  Aligned_cols=106  Identities=19%  Similarity=0.098  Sum_probs=86.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-H------HhhhCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-F------IDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~------~~~~~~   78 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|....... .      ..++++
T Consensus       140 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r  219 (262)
T 3ksu_A          140 NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQ  219 (262)
T ss_dssp             EEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCC
T ss_pred             CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccC
Confidence            48999999999988889999999999999999999999 999999999999999999987542111 1      124567


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ..+|||+++.++||+++ +.+.+|..+..||++..
T Consensus       220 ~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          220 LTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             SCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCC
T ss_pred             CCCHHHHHHHHHHHcCC-CCCccCCEEEECCCccC
Confidence            88999999999999999 88899999999999654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.70  E-value=4.4e-17  Score=141.32  Aligned_cols=105  Identities=18%  Similarity=0.173  Sum_probs=90.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH---HHH--hhhCCC-
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS---KFI--DLMGGF-   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~---~~~--~~~~~~-   79 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+| ....+   .+.  .++++. 
T Consensus       173 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~  251 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRRE  251 (288)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSC
T ss_pred             CeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCC
Confidence            58999999999999999999999999999999999998 99999999999999999998 31111   111  145667 


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       252 ~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            899999999999999988889999999899853

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.69  E-value=1.2e-17  Score=142.38  Aligned_cols=110  Identities=24%  Similarity=0.242  Sum_probs=93.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH------HhhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF------IDLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~------~~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....++.      ..++.+
T Consensus       129 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~  208 (254)
T 1hdc_A          129 GGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGR  208 (254)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSS
T ss_pred             CCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCC
Confidence            358999999999999999999999999999999999998 9999999999999999999865421111      113456


Q ss_pred             CC-CHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           79 FV-PMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        79 ~~-~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      .. +|+|+++.++|++++.+.+.+|..+..+|++...|
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  246 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTGP  246 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTSC
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            77 99999999999999888888898888899976544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.69  E-value=2.9e-17  Score=138.56  Aligned_cols=106  Identities=27%  Similarity=0.404  Sum_probs=90.8

Q ss_pred             CCcEEEEEcCCCccCCC--CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH------h
Q 023465            6 KPGVIINMGSSAGLYPM--YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI------D   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~--~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~------~   74 (282)
                      +.|+|||+||.++..+.  ++...|++||+++++|+++++. ++++||+||+|+||+++|+|.....  ++..      .
T Consensus       120 ~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  199 (239)
T 2ekp_A          120 GWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARI  199 (239)
T ss_dssp             TCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTC
T ss_pred             CCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcC
Confidence            35899999999998877  8899999999999999999998 9999999999999999999865421  1111      1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++++.+|+|+++.++|++++.+.+.+|..+..+|++
T Consensus       200 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          200 PMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            4567789999999999999988888889888888885

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.69  E-value=2.2e-17  Score=142.14  Aligned_cols=107  Identities=24%  Similarity=0.255  Sum_probs=87.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HH----H--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SK----F--   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~----~--   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....      ++    .  
T Consensus       149 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (273)
T 1ae1_A          149 QNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV  228 (273)
T ss_dssp             TSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH
T ss_pred             CCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh
Confidence            358999999999999999999999999999999999998 9999999999999999999864321      11    1  


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..++++..+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       229 ~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          229 KTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            1255678899999999999999988888898888899854

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.69  E-value=2.8e-17  Score=141.07  Aligned_cols=106  Identities=32%  Similarity=0.338  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCC-ccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH----H--hh
Q 023465            6 KPGVIINMGSSA-GLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF----I--DL   75 (282)
Q Consensus         6 ~~g~Iv~isS~~-~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~----~--~~   75 (282)
                      +.|+|||+||.+ +..+.++...|++||+++++|+++++. ++++||+||+|+||+++|+|.....  ++.    .  .+
T Consensus       149 ~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  228 (267)
T 1vl8_A          149 DNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP  228 (267)
T ss_dssp             SSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT
T ss_pred             CCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCC
Confidence            458999999998 888889999999999999999999998 9999999999999999999875432  111    1  14


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++..+|+|+|+.++||+++.+.+.+|..+..+|++
T Consensus       229 ~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          229 LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            567889999999999999998888888888888885

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.69  E-value=2.4e-17  Score=140.47  Aligned_cols=102  Identities=14%  Similarity=0.188  Sum_probs=85.1

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---------HH----H-
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---------SK----F-   72 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---------~~----~-   72 (282)
                      |+|||+||.++..+.++...|++||+|+++|+|+|+. +  .|||||+|+||+++|+|.....         ++    + 
T Consensus       130 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (254)
T 3kzv_A          130 GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFR  207 (254)
T ss_dssp             CEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHH
T ss_pred             CeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHH
Confidence            8999999999999999999999999999999999998 8  6899999999999999864321         11    1 


Q ss_pred             -HhhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcc
Q 023465           73 -IDLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGM  111 (282)
Q Consensus        73 -~~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~  111 (282)
                       ..++++..+|+|+++.++||+++. +.+.+|.++..|++.
T Consensus       208 ~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          208 GLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             HHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence             125678899999999999999999 488999999888874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.69  E-value=6.1e-17  Score=138.93  Aligned_cols=101  Identities=20%  Similarity=0.231  Sum_probs=86.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------HHHhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------KFIDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------~~~~~~   76 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|++......        ....++
T Consensus       137 ~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  216 (266)
T 3p19_A          137 NCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDM  216 (266)
T ss_dssp             TCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHT
T ss_pred             CCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccc
Confidence            458999999999999999999999999999999999998 99999999999999999999754321        112267


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      ++..+|+|+|++++|++++.+....+....
T Consensus       217 ~r~~~pedvA~av~~l~~~~~~~~~~~i~i  246 (266)
T 3p19_A          217 GGVLAADDVARAVLFAYQQPQNVCIREIAL  246 (266)
T ss_dssp             TCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHcCCCCccceeeEE
Confidence            888999999999999999988766555443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.69  E-value=2.1e-17  Score=140.71  Aligned_cols=107  Identities=14%  Similarity=0.118  Sum_probs=91.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcc---------cCcchhhhhH---HH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV---------QTEMGLKVAS---KF   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v---------~T~~~~~~~~---~~   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||++         +|+|.....+   .+
T Consensus       123 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~  202 (254)
T 1zmt_A          123 KSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHV  202 (254)
T ss_dssp             TCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHH
T ss_pred             CCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHH
Confidence            358999999999999999999999999999999999998 9999999999999999         9988653211   11


Q ss_pred             H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .  .++++..+|+|+++.++|++++.+.+.+|..+..+|++.
T Consensus       203 ~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          203 KKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             hccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            1  245678899999999999999988888888888898853

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.69  E-value=1.2e-17  Score=142.14  Aligned_cols=111  Identities=21%  Similarity=0.259  Sum_probs=83.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+|||+||.++..+.+....|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.......  .+..++.+|+|
T Consensus       136 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~p~d  213 (250)
T 3nyw_A          136 KNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP--FKDEEMIQPDD  213 (250)
T ss_dssp             TCEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC--SCGGGSBCHHH
T ss_pred             CCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC--cccccCCCHHH
Confidence            458999999999998777799999999999999999998 999999999999999999997643221  13346789999


Q ss_pred             HHHHHHHhhcCCCC-ceEEEEEecCCccccccCch
Q 023465           85 VVKGAFELITDESK-AGSCLWITNRRGMEYWPTSE  118 (282)
Q Consensus        85 ~a~~~~~l~~~~~~-~~~~~~~~~~g~~~~~p~pq  118 (282)
                      +++.++||+++.+. ..++..+..|++..+.+.++
T Consensus       214 va~~v~~l~s~~~~~~~~~~~i~vd~~~~~~~~~~  248 (250)
T 3nyw_A          214 LLNTIRCLLNLSENVCIKDIVFEMKKSIIEGHHHH  248 (250)
T ss_dssp             HHHHHHHHHTSCTTEECCEEEEEEHHHHHC-----
T ss_pred             HHHHHHHHHcCCCceEeeEEEEEeecccccccccc
Confidence            99999999997665 56777887888765544443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.68  E-value=3.5e-17  Score=143.80  Aligned_cols=106  Identities=15%  Similarity=0.080  Sum_probs=91.2

Q ss_pred             cEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhh--------HHH----
Q 023465            8 GVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVA--------SKF----   72 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~--------~~~----   72 (282)
                      |+|||+||.++..+.++. ..|++||+|+++|+++|+. +++ +|||||+|+||+++|+|.....        ++.    
T Consensus       172 g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  251 (315)
T 2o2s_A          172 GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYS  251 (315)
T ss_dssp             EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHH
T ss_pred             CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHH
Confidence            899999999999888887 5899999999999999998 885 8999999999999999865321        111    


Q ss_pred             --HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 --IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        ..++++..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       252 ~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          252 YNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence              12567789999999999999999888999999999999643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.68  E-value=4.6e-17  Score=139.42  Aligned_cols=106  Identities=18%  Similarity=0.220  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCCccCCC--CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh
Q 023465            6 KPGVIINMGSSAGLYPM--YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~--~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~   76 (282)
                      +.|+||++||.++..+.  ++...|++||+|+++|+++|+. ++++ |+||+|+||+++|+|.....++..+      ++
T Consensus       151 ~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  229 (267)
T 3gdg_A          151 GTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPM  229 (267)
T ss_dssp             TCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTT
T ss_pred             CCceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCC
Confidence            35899999999998765  5789999999999999999998 9887 9999999999999998654333222      45


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++..+|+|+++.++||+++++.+.+|..+..||++.
T Consensus       230 ~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          230 GRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            677889999999999999999999999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.68  E-value=4.5e-17  Score=141.11  Aligned_cols=109  Identities=17%  Similarity=0.135  Sum_probs=92.4

Q ss_pred             CCcEEEEEcCCCccCCC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCC-cccCcchhhhhHHHHhhhCCCCCH
Q 023465            6 KPGVIINMGSSAGLYPM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE-FVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      +.|+|||+||.++..+. ++...|++||+|+++|+++|+. ++++|||||+|+|| .++|++....... ..++.+..+|
T Consensus       143 ~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~-~~~~~r~~~p  221 (285)
T 3sc4_A          143 DNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG-DEAMARSRKP  221 (285)
T ss_dssp             SSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS-CCCCTTCBCT
T ss_pred             CCcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc-cccccCCCCH
Confidence            46899999999998875 7889999999999999999998 99999999999999 6899987543221 1245678899


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      ||+++.++||+++.+ +.+|..+..++++.....
T Consensus       222 edvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~g~  254 (285)
T 3sc4_A          222 EVYADAAYVVLNKPS-SYTGNTLLCEDVLLESGV  254 (285)
T ss_dssp             HHHHHHHHHHHTSCT-TCCSCEEEHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCcc-cccceEEEEcCchhccCc
Confidence            999999999999988 889988888888655443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.68  E-value=5.3e-17  Score=138.68  Aligned_cols=106  Identities=19%  Similarity=0.223  Sum_probs=90.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H-------HHH--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S-------KFI--   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~-------~~~--   73 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....  +       ...  
T Consensus       137 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T 2ae2_A          137 ERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR  216 (260)
T ss_dssp             SSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT
T ss_pred             CCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc
Confidence            358999999999999999999999999999999999998 9999999999999999999864321  1       111  


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .++++..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       217 ~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          217 CALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            14567889999999999999988888888888888885

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.68  E-value=5e-17  Score=140.20  Aligned_cols=104  Identities=24%  Similarity=0.250  Sum_probs=90.4

Q ss_pred             cEEEEEcCCCccCCCCCCh-hhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----HHH----HhhhC
Q 023465            8 GVIINMGSSAGLYPMYNDP-IYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----SKF----IDLMG   77 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~-~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----~~~----~~~~~   77 (282)
                      |+|||+||.++..+.++.. .|++||+|+++|+++++. ++++||+||+|+||+++|+|.....    ...    ..+++
T Consensus       161 g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  240 (276)
T 2b4q_A          161 ARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMG  240 (276)
T ss_dssp             EEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTS
T ss_pred             CEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCC
Confidence            8999999999998888888 999999999999999998 9999999999999999999875422    111    12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+|+|+|+.++|++++.+.+.+|..+..+|++
T Consensus       241 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          241 RWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            7889999999999999988888888888888885

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.68  E-value=5.1e-17  Score=143.61  Aligned_cols=105  Identities=19%  Similarity=0.081  Sum_probs=91.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---HH--hhhC-CC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---FI--DLMG-GF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---~~--~~~~-~~   79 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+| ....+.   +.  .++. +.
T Consensus       213 ~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~  291 (328)
T 2qhx_A          213 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRD  291 (328)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHHTTCTTTTSC
T ss_pred             CcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHHhhCCCCCCC
Confidence            58999999999999999999999999999999999998 99999999999999999998 332111   11  1445 78


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+|+|+++.++||+++.+.+.+|..+..+|++.
T Consensus       292 ~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          292 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            899999999999999888888999998899864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.68  E-value=1.7e-17  Score=141.34  Aligned_cols=106  Identities=27%  Similarity=0.386  Sum_probs=86.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----HH--hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----FI--DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~~--~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....++    ..  .++.+
T Consensus       137 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~  216 (253)
T 2nm0_A          137 KKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGR  216 (253)
T ss_dssp             TCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCS
T ss_pred             CCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCC
Confidence            358999999999988888889999999999999999998 999999999999999999986542221    11  14467


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+|+.+++++++++.+.+|..+..+|++
T Consensus       217 ~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          217 YARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            789999999999999998888889888888885

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.68  E-value=3e-17  Score=139.44  Aligned_cols=106  Identities=21%  Similarity=0.218  Sum_probs=80.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------H-HH-----
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------S-KF-----   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~-~~-----   72 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....      + .+     
T Consensus       124 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  203 (250)
T 2fwm_X          124 RGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE  203 (250)
T ss_dssp             TCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------
T ss_pred             CCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh
Confidence            358999999999999999999999999999999999998 9999999999999999999864321      1 11     


Q ss_pred             ----HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 ----IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                          ..++++..+|+|+|+.++|++++++.+.+|..+..+|++
T Consensus       204 ~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          204 QFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             ------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence                124556789999999999999998888888888888885

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.68  E-value=4.6e-17  Score=140.47  Aligned_cols=106  Identities=32%  Similarity=0.426  Sum_probs=91.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHH--
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKF--   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~--   72 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....           ++.  
T Consensus       152 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 2rhc_B          152 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD  231 (277)
T ss_dssp             EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             CeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHH
Confidence            58999999999999999999999999999999999998 9999999999999999999865321           111  


Q ss_pred             --H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 --I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 --~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        .  .+++++.+|+|+++.++|++++++.+.+|..+..+|++.
T Consensus       232 ~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          232 RITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             HHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence              1  145678899999999999999888888888888888853

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.68  E-value=3.5e-17  Score=150.56  Aligned_cols=107  Identities=21%  Similarity=0.227  Sum_probs=89.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---H---HhhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---F---IDLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---~---~~~~~~   78 (282)
                      +.|+|||+||.++..+.+++..|++||+++++|+++|+. ++++||+||+|+||+++|+|.......   .   ..++.+
T Consensus       338 ~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r  417 (454)
T 3u0b_A          338 EGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQ  417 (454)
T ss_dssp             TTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSS
T ss_pred             CCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccC
Confidence            468999999999999999999999999999999999998 999999999999999999997543221   1   124566


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ..+|+|+++.++||+++.+.+.||..+..||++.
T Consensus       418 ~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          418 GGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             CBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             CCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence            7899999999999999999999999999998853

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.68  E-value=1.4e-17  Score=146.56  Aligned_cols=106  Identities=13%  Similarity=0.082  Sum_probs=67.6

Q ss_pred             cEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhhH--------HH----
Q 023465            8 GVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVAS--------KF----   72 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~~--------~~----   72 (282)
                      |+|||+||.++..+.++. ..|++||+|+++|+|+|+. +++ +|||||+|+||+++|+|......        +.    
T Consensus       185 g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  264 (319)
T 2ptg_A          185 GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYS  264 (319)
T ss_dssp             EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----------------------
T ss_pred             ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHH
Confidence            899999999999888887 6999999999999999998 885 89999999999999998653220        00    


Q ss_pred             --HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           73 --IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        73 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        ..++++..+|+|+++.++||+++.+.+.+|..+..||++..
T Consensus       265 ~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          265 EANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             --------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence              12456788999999999999999888999999999999754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.67  E-value=5.2e-17  Score=138.46  Aligned_cols=107  Identities=27%  Similarity=0.379  Sum_probs=90.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh------hHH----HH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV------ASK----FI-   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~------~~~----~~-   73 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++....      .++    +. 
T Consensus       127 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  206 (256)
T 2d1y_A          127 GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED  206 (256)
T ss_dssp             TCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHT
T ss_pred             CCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHh
Confidence            358999999999999999999999999999999999998 999999999999999999986542      111    11 


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                       .++++..+|+|+++.+++++++.+.+.+|..+..+|++.
T Consensus       207 ~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~  246 (256)
T 2d1y_A          207 LHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  246 (256)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence             144677899999999999999888788888888888854

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.67  E-value=7.6e-17  Score=137.31  Aligned_cols=106  Identities=24%  Similarity=0.219  Sum_probs=90.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HHH---------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SKF---------   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~~---------   72 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....   ++.         
T Consensus       129 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  208 (255)
T 2q2v_A          129 NWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQH  208 (255)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             CCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHH
Confidence            358999999999999999999999999999999999998 9999999999999999999865321   111         


Q ss_pred             ---H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 ---I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ---~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                         .  .++.++.+|+|+++.++|++++++.+.+|..+..+|++
T Consensus       209 ~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          209 DLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             HHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence               1  13456789999999999999988878888888888875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.67  E-value=1.3e-16  Score=134.42  Aligned_cols=99  Identities=26%  Similarity=0.250  Sum_probs=80.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++|+|......   .+..+..+|||+
T Consensus       127 ~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~pedv  203 (235)
T 3l6e_A          127 GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---VDPSGFMTPEDA  203 (235)
T ss_dssp             CEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------CBCHHHH
T ss_pred             CCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---CCCcCCCCHHHH
Confidence            36999999999999999999999999999999999998 99999999999999999999754322   233467899999


Q ss_pred             HHHHHHhhcC-CCCceEEEEEecC
Q 023465           86 VKGAFELITD-ESKAGSCLWITNR  108 (282)
Q Consensus        86 a~~~~~l~~~-~~~~~~~~~~~~~  108 (282)
                      |+.+++++++ .+.+.+++.+...
T Consensus       204 A~~v~~l~~~~~~~~i~~i~~~~~  227 (235)
T 3l6e_A          204 AAYMLDALEARSSCHVTDLFIGRN  227 (235)
T ss_dssp             HHHHHHHTCCCSSEEEEEEEEEEC
T ss_pred             HHHHHHHHhCCCCcceeeEEEecC
Confidence            9999999985 4557788777543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.67  E-value=1.2e-16  Score=137.06  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=77.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh-----hhCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID-----LMGGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-----~~~~~   79 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. + + |||||+|+||+++|+|..........     .....
T Consensus       131 ~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  208 (264)
T 3tfo_A          131 RSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIA  208 (264)
T ss_dssp             TCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------C
T ss_pred             CCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccC
Confidence            458999999999999999999999999999999999998 8 5 99999999999999997543221111     11225


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .+|+|+|+.++||+++.+...++.....+++
T Consensus       209 ~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~  239 (264)
T 3tfo_A          209 LQPADIARAVRQVIEAPQSVDTTEITIRPTA  239 (264)
T ss_dssp             CCHHHHHHHHHHHHHSCTTEEEEEEEEEECC
T ss_pred             CCHHHHHHHHHHHhcCCccCccceEEEecCc
Confidence            7999999999999999998888777765555

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.67  E-value=3.1e-17  Score=140.12  Aligned_cols=106  Identities=17%  Similarity=0.131  Sum_probs=89.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh----------hhhHHH--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL----------KVASKF--   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~----------~~~~~~--   72 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++..          ...++.  
T Consensus       135 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (260)
T 2z1n_A          135 GWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEAL  214 (260)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------
T ss_pred             CCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHH
Confidence            358999999999999999999999999999999999998 9999999999999999999865          211111  


Q ss_pred             H-----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I-----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~-----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .     .+++++.+|+|+++.++|++++.+.+.+|..+..+|++
T Consensus       215 ~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          215 KSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             -----CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            1     14566789999999999999998888888888888885

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.66  E-value=8.6e-17  Score=138.48  Aligned_cols=99  Identities=19%  Similarity=0.120  Sum_probs=72.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----HhhhCCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----IDLMGGFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~~~~~~~~   80 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++||+||+|+||+++|+|.....+..     ..+..++.
T Consensus       156 ~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  235 (272)
T 4dyv_A          156 GGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVM  235 (272)
T ss_dssp             CEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------
T ss_pred             CcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCC
Confidence            58999999999999999999999999999999999998 9999999999999999999976543221     12445678


Q ss_pred             CHHHHHHHHHHhhcCCCCc-eEEEEE
Q 023465           81 PMEMVVKGAFELITDESKA-GSCLWI  105 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~-~~~~~~  105 (282)
                      +|+|+|++++||++++... .+...+
T Consensus       236 ~pedvA~~v~fL~s~~~~~~~~~i~i  261 (272)
T 4dyv_A          236 DVAHVASAVVYMASLPLDANVQFMTI  261 (272)
T ss_dssp             CHHHHHHHHHHHHHSCTTSCCCEEEE
T ss_pred             CHHHHHHHHHHHhCCCCcCccceEEE
Confidence            9999999999999976653 344443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.66  E-value=4.8e-17  Score=139.33  Aligned_cols=106  Identities=31%  Similarity=0.373  Sum_probs=91.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----H--hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----I--DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----~--~~~~~~   79 (282)
                      .|+|||+||.++. +.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....++.    .  .++++.
T Consensus       129 ~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~  207 (263)
T 2a4k_A          129 GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRA  207 (263)
T ss_dssp             TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSC
T ss_pred             CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCC
Confidence            5899999999998 778889999999999999999998 9999999999999999999875432221    1  145678


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+|+|+++.++|++++++.+.+|..+..+|++..
T Consensus       208 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          208 GRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence            8999999999999999888888988888998644

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.66  E-value=2.6e-17  Score=142.43  Aligned_cols=106  Identities=26%  Similarity=0.263  Sum_probs=88.7

Q ss_pred             CcEEEEEcCCCccCCC-----------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----
Q 023465            7 PGVIINMGSSAGLYPM-----------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----   70 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----   70 (282)
                      +|+|||+||.++..+.           ++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|......    
T Consensus       146 ~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  225 (287)
T 3pxx_A          146 GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQF  225 (287)
T ss_dssp             TCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHH
T ss_pred             CcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhh
Confidence            5899999999887654           6678899999999999999998 99999999999999999998753210    


Q ss_pred             -------H----HH-----h-hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           71 -------K----FI-----D-LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        71 -------~----~~-----~-~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                             .    ..     . ...+..+|+|++++++||+++++.+.+|..+..||++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          226 RPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             CTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence                   0    00     0 11567899999999999999999999999999999964

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.66  E-value=1.1e-16  Score=136.93  Aligned_cols=107  Identities=21%  Similarity=0.323  Sum_probs=91.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HH--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SK--   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~--   71 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....           ++  
T Consensus       135 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (263)
T 3ai3_A          135 GGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYL  214 (263)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHH
T ss_pred             CCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHH
Confidence            358999999999999999999999999999999999998 9999999999999999999864321           11  


Q ss_pred             --HH---hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 --FI---DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 --~~---~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        ..   .+++++.+|+|+++.++|++++.+.+.+|..+..+|+..
T Consensus       215 ~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~  260 (263)
T 3ai3_A          215 QSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGML  260 (263)
T ss_dssp             HHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCC
T ss_pred             HHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence              11   245678899999999999999888888888888888753

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.66  E-value=2.4e-16  Score=134.99  Aligned_cols=107  Identities=16%  Similarity=0.142  Sum_probs=91.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....  ++.      ..++.
T Consensus       141 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  220 (265)
T 1qsg_A          141 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR  220 (265)
T ss_dssp             EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999999999998 9999999999999999999865321  111      12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.++|++++.+.+.+|..+..+|++..
T Consensus       221 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          221 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence            788999999999999998888888888888888643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=9.9e-17  Score=139.80  Aligned_cols=106  Identities=22%  Similarity=0.186  Sum_probs=90.8

Q ss_pred             cEEEEEcCCCccCCC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---------HHHH---
Q 023465            8 GVIINMGSSAGLYPM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---------SKFI---   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---------~~~~---   73 (282)
                      |+|||+||.++..+. ++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....         ++..   
T Consensus       159 g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
T 1xhl_A          159 GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR  238 (297)
T ss_dssp             CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             CEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH
Confidence            899999999998888 8999999999999999999998 9999999999999999999865430         1111   


Q ss_pred             ---hhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccc
Q 023465           74 ---DLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ---~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~  113 (282)
                         .+++++.+|+|+|+.++||+++. +.+.+|..+..+|++..
T Consensus       239 ~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  282 (297)
T 1xhl_A          239 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL  282 (297)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccc
Confidence               13467789999999999999987 77888888888998654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.66  E-value=7.2e-17  Score=137.37  Aligned_cols=99  Identities=16%  Similarity=0.138  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEE-EEEeCCcccCcchhhhhHHHH------hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRI-NVLCPEFVQTEMGLKVASKFI------DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v-~~i~PG~v~T~~~~~~~~~~~------~~~~   77 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||| |+|+||+++|+|.....++..      .+..
T Consensus       133 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  212 (252)
T 3h7a_A          133 GQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL  212 (252)
T ss_dssp             TCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------
T ss_pred             CCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCcc
Confidence            358999999999999999999999999999999999998 99999999 999999999999865433221      1333


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                       ..+|+|+|+.++||++++....++...
T Consensus       213 -~~~pedvA~~~~~l~s~~~~~~~~~i~  239 (252)
T 3h7a_A          213 -LMPPAAVAGAYWQLYQQPKSAWTFEME  239 (252)
T ss_dssp             --CCHHHHHHHHHHHHHCCGGGBCSEEE
T ss_pred             -CCCHHHHHHHHHHHHhCchhcceeeEE
Confidence             789999999999999977765555444

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.66  E-value=1.3e-16  Score=136.42  Aligned_cols=105  Identities=30%  Similarity=0.308  Sum_probs=90.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------HHH--
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------SKF--   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~~~--   72 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....           ++.  
T Consensus       138 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T 3ak4_A          138 KGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRA  217 (263)
T ss_dssp             CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             CeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHH
Confidence            58999999999999999999999999999999999998 9999999999999999999864321           111  


Q ss_pred             --H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 --I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 --~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        .  .++.++.+|+|+++.++|++++.+.+.+|..+..+|++
T Consensus       218 ~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          218 EYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence              1  14567889999999999999988888888888888875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.66  E-value=1.2e-16  Score=138.17  Aligned_cols=105  Identities=23%  Similarity=0.253  Sum_probs=89.4

Q ss_pred             CcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----------H---
Q 023465            7 PGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----------S---   70 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----------~---   70 (282)
                      .|+|||+||.++..+.+. ...|++||+|+++|+++++. ++++||+||+|+||+++|+|.....           +   
T Consensus       156 ~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T 1g0o_A          156 GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEV  235 (283)
T ss_dssp             TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHH
T ss_pred             CCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHH
Confidence            589999999999887664 89999999999999999998 9999999999999999999864321           1   


Q ss_pred             -HH----HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           71 -KF----IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        71 -~~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       .+    ..++++..+|+|+++.++||+++.+.+.+|..+..+|++
T Consensus       236 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          236 DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence             11    124567889999999999999998888899888888885

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.66  E-value=1.1e-16  Score=136.97  Aligned_cols=106  Identities=15%  Similarity=0.135  Sum_probs=84.2

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH--HhhhCCC
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF--IDLMGGF   79 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~--~~~~~~~   79 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. +++ +||||+|+||+++|++.....  ...  ..++.+.
T Consensus       147 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~  225 (260)
T 3gem_A          147 SEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIE  225 (260)
T ss_dssp             SSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------CCSCCC
T ss_pred             cCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCC
Confidence            3458999999999999999999999999999999999998 888 699999999999999754211  111  1255678


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+|+|+++.++||++  +.+.+|..+..||++..
T Consensus       226 ~~~edva~~v~~L~~--~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          226 PGAEVIYQSLRYLLD--STYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             CCTHHHHHHHHHHHH--CSSCCSCEEEESTTTTT
T ss_pred             CCHHHHHHHHHHHhh--CCCCCCCEEEECCCccc
Confidence            899999999999993  56788888888998643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.66  E-value=8.4e-17  Score=139.15  Aligned_cols=99  Identities=19%  Similarity=0.170  Sum_probs=78.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-----HhhhCCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-----IDLMGGFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-----~~~~~~~~   80 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....+..     ..+..+..
T Consensus       165 ~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 4dry_A          165 GGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTI  244 (281)
T ss_dssp             CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCB
T ss_pred             CcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCC
Confidence            58999999999999999999999999999999999998 9999999999999999999976432211     11345678


Q ss_pred             CHHHHHHHHHHhhcCCCCc-eEEEEE
Q 023465           81 PMEMVVKGAFELITDESKA-GSCLWI  105 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~-~~~~~~  105 (282)
                      +|||+|++++||++.+... .+...+
T Consensus       245 ~pedvA~~v~fL~s~~~~~~i~~~~i  270 (281)
T 4dry_A          245 PIEHIAEAVVYMASLPLSANVLTMTV  270 (281)
T ss_dssp             CHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             CHHHHHHHHHHHhCCCccCccccEEE
Confidence            9999999999999977664 344444

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=8.2e-17  Score=136.39  Aligned_cols=106  Identities=30%  Similarity=0.368  Sum_probs=90.5

Q ss_pred             CCcEEEEEcCCCccCCCC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HH----HH
Q 023465            6 KPGVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SK----FI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~----~~   73 (282)
                      +.|+|||+||.++..+.+ +...|++||+|+++|+++++. ++++||+||+|+||+++|++.....      ++    +.
T Consensus       124 ~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  203 (246)
T 2ag5_A          124 KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL  203 (246)
T ss_dssp             TCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH
T ss_pred             CCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHH
Confidence            358999999999988877 899999999999999999998 9999999999999999999865311      11    11


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        .++++..+|+|+|+.++|++++.+.+.+|..+..+|++
T Consensus       204 ~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          204 KRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             hcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence              14567789999999999999998888888888888885

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.66  E-value=1.9e-16  Score=135.61  Aligned_cols=106  Identities=23%  Similarity=0.228  Sum_probs=90.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------H----HH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------S----KF-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~----~~-   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++ |+||+|+||+++|+|.....       +    +. 
T Consensus       124 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  202 (264)
T 2dtx_A          124 RDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKI  202 (264)
T ss_dssp             SSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHH
T ss_pred             CCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHH
Confidence            358999999999999999999999999999999999998 9888 99999999999999865421       1    11 


Q ss_pred             ---H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 ---I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ---~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                         .  .+++++.+|+|+|+.++|++++++.+.+|..+..+|++.
T Consensus       203 ~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          203 SEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence               1  145678899999999999999888888888888888864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.66  E-value=9.7e-17  Score=139.69  Aligned_cols=107  Identities=17%  Similarity=0.074  Sum_probs=90.8

Q ss_pred             CcEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhh--hHHH------Hhh
Q 023465            7 PGVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKV--ASKF------IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~--~~~~------~~~   75 (282)
                      +|+|||+||.++..+.++. ..|++||+|+++|+++|+. +++ +|||||+|+||+++|+|....  .++.      ..+
T Consensus       170 ~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  249 (297)
T 1d7o_A          170 GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP  249 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSS
T ss_pred             CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCC
Confidence            3899999999999888887 6999999999999999998 885 899999999999999986532  1111      124


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.+..+|+|+++.++||+++.+.+.+|..+..+|++..
T Consensus       250 ~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          250 IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            56788999999999999998888889988888998643

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.66  E-value=9.2e-17  Score=137.15  Aligned_cols=107  Identities=17%  Similarity=0.150  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H----HH--Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S----KF--IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~----~~--~~~~   76 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++|||||+|+||+++|++.....  +    ..  ..++
T Consensus       142 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T 2zat_A          142 GGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI  221 (260)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTC
T ss_pred             CCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCC
Confidence            458999999999999999999999999999999999998 9999999999999999999864321  1    11  1245


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+..+|+|+++.++||+++++.+.+|..+..+|+..
T Consensus       222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  257 (260)
T 2zat_A          222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTA  257 (260)
T ss_dssp             SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence            678899999999999999888888888888888853

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.66  E-value=2.4e-16  Score=135.76  Aligned_cols=107  Identities=16%  Similarity=0.076  Sum_probs=92.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....  ++    +  ..++.
T Consensus       137 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  216 (275)
T 2pd4_A          137 GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR  216 (275)
T ss_dssp             EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcC
Confidence            48999999999999999999999999999999999998 9999999999999999999865421  11    1  12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.++|++++.+.+.+|..+..+|++..
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            788999999999999998888888888888888644

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=1.1e-16  Score=138.19  Aligned_cols=106  Identities=22%  Similarity=0.184  Sum_probs=90.5

Q ss_pred             cEEEEEcCCCccCCC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--h-------HHHH---
Q 023465            8 GVIINMGSSAGLYPM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--A-------SKFI---   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~-------~~~~---   73 (282)
                      |+|||+||.++..+. ++...|++||+|+++|+++++. ++++||+||+|+||+++|+|....  .       ++..   
T Consensus       141 g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
T 1xkq_A          141 GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  220 (280)
T ss_dssp             CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             CcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHH
Confidence            899999999998887 8999999999999999999998 999999999999999999986543  0       1111   


Q ss_pred             ---hhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccc
Q 023465           74 ---DLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ---~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~  113 (282)
                         .++++..+|+|+|+.++||+++. +.+.+|..+..+|++..
T Consensus       221 ~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          221 KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence               13467789999999999999987 77888888888998644

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.66  E-value=2.6e-16  Score=134.54  Aligned_cols=106  Identities=16%  Similarity=0.111  Sum_probs=91.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....  ++    +  ..++.
T Consensus       139 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~  218 (261)
T 2wyu_A          139 GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR  218 (261)
T ss_dssp             EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999999999998 9999999999999999999864321  11    1  12556


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++|++++.+.+.+|..+..+|++.
T Consensus       219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  253 (261)
T 2wyu_A          219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (261)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcc
Confidence            78899999999999999888888888888888854

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.65  E-value=2.1e-16  Score=135.14  Aligned_cols=105  Identities=22%  Similarity=0.269  Sum_probs=86.4

Q ss_pred             CCcEEEEEcCCCccC--CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-H--hhhCCC
Q 023465            6 KPGVIINMGSSAGLY--PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-I--DLMGGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~--~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-~--~~~~~~   79 (282)
                      +.|+|||+||..+..  +.+....|++||+|+++|+++++. ++++||+||+|+||+++|+|......+. .  .++++.
T Consensus       146 ~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~  225 (260)
T 3un1_A          146 GSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRM  225 (260)
T ss_dssp             TCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSC
T ss_pred             CCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCC
Confidence            458999999988864  445668999999999999999998 9999999999999999999975432221 1  256788


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+|+|++++++||  +.+.+.+|..+..||++.
T Consensus       226 ~~~~dva~av~~L--~~~~~itG~~i~vdGG~~  256 (260)
T 3un1_A          226 GEIRDVVDAVLYL--EHAGFITGEILHVDGGQN  256 (260)
T ss_dssp             BCHHHHHHHHHHH--HHCTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHh--cccCCCCCcEEEECCCee
Confidence            9999999999999  455677888888888864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.65  E-value=3.1e-16  Score=133.76  Aligned_cols=101  Identities=15%  Similarity=0.190  Sum_probs=83.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-----HH----H--H
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-----SK----F--I   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-----~~----~--~   73 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. +.+  ||||+|+||+++|+|.....     ++    +  .
T Consensus       147 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T 1oaa_A          147 LSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL  224 (259)
T ss_dssp             CEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             CCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHh
Confidence            358999999999999999999999999999999999998 864  99999999999999865431     11    1  1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCC
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRR  109 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g  109 (282)
                      .++.+..+|+|+|+.++|++++ +.+.+|..+..++
T Consensus       225 ~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          225 KSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             hhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            1457889999999999999986 5677787776553

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.65  E-value=2.8e-16  Score=136.03  Aligned_cols=107  Identities=18%  Similarity=0.159  Sum_probs=90.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----H--HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----F--IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~--~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....  ++    .  ..++.
T Consensus       153 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  232 (285)
T 2p91_A          153 NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFG  232 (285)
T ss_dssp             CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTS
T ss_pred             CCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999999999998 9999999999999999999864321  11    1  12456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.++|++++.+.+.+|..+..+|++..
T Consensus       233 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          233 KPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            788999999999999998888888888888888644

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.65  E-value=3.1e-17  Score=141.35  Aligned_cols=103  Identities=18%  Similarity=0.237  Sum_probs=83.0

Q ss_pred             CCCcEEEEEcCCCccCC--CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCC-cccCcchhhhhHHHHhhhCCCC
Q 023465            5 KKPGVIINMGSSAGLYP--MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE-FVQTEMGLKVASKFIDLMGGFV   80 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG-~v~T~~~~~~~~~~~~~~~~~~   80 (282)
                      ++.|+|||+||.++..+  .++...|++||+|+++|+|+|+. ++++|||||+|+|| .++|+|......   .+..+..
T Consensus       139 ~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~---~~~~~~~  215 (274)
T 3e03_A          139 APNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG---VDAAACR  215 (274)
T ss_dssp             SSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C---CCGGGSB
T ss_pred             cCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc---ccccccC
Confidence            34689999999999887  67889999999999999999998 99999999999999 689998732211   1223467


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      +|||+++.++||+++.+.+.+|.++..+|.
T Consensus       216 ~pedvA~~v~~l~s~~~~~itG~~i~~~g~  245 (274)
T 3e03_A          216 RPEIMADAAHAVLTREAAGFHGQFLIDDEV  245 (274)
T ss_dssp             CTHHHHHHHHHHHTSCCTTCCSCEEEHHHH
T ss_pred             CHHHHHHHHHHHhCccccccCCeEEEcCcc
Confidence            999999999999999999999998854444

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.65  E-value=2.6e-16  Score=135.43  Aligned_cols=103  Identities=13%  Similarity=0.149  Sum_probs=88.5

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH----HH--hhhCC-C
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK----FI--DLMGG-F   79 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~----~~--~~~~~-~   79 (282)
                      |+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+ . ...++    +.  .++.+ .
T Consensus       162 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~~~~~~p~~r~~  239 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQETQEEYRRKVPLGQSE  239 (276)
T ss_dssp             EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHHHHHHHTTCTTTSCC
T ss_pred             cEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHHHHHHHhcCCCCCCC
Confidence            8999999999999999999999999999999999998 9999999999999999998 2 21111    11  14456 7


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+|+|+++.++|++++.+.+.+|..+..+|++.
T Consensus       240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence            899999999999999888888888888888853

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.65  E-value=9.2e-17  Score=135.94  Aligned_cols=100  Identities=17%  Similarity=0.039  Sum_probs=85.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. +++ +|||||+|+||+++|+|.....+..  ...+..+|
T Consensus       144 ~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~p  221 (247)
T 3i1j_A          144 SEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE--NPLNNPAP  221 (247)
T ss_dssp             SSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS--CGGGSCCG
T ss_pred             CCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc--CccCCCCH
Confidence            3468999999999999999999999999999999999998 876 8999999999999999975432211  12346789


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEe
Q 023465           83 EMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      +|+++.++||+++++.+.+|..+.
T Consensus       222 ~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          222 EDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             GGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhCchhccccCeeec
Confidence            999999999999998888887764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.65  E-value=4.6e-16  Score=129.82  Aligned_cols=102  Identities=16%  Similarity=0.073  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH--------H--Hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK--------F--IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~--------~--~~~   75 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. +++  ||||+|+||+++|++.......        .  ..+
T Consensus       109 ~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  186 (223)
T 3uce_A          109 GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP  186 (223)
T ss_dssp             EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST
T ss_pred             CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC
Confidence            48999999999999999999999999999999999998 877  9999999999999987543221        1  125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++..+|+|+|+++++++++  .+.+|..+..+|+..
T Consensus       187 ~~~~~~~~dvA~~~~~l~~~--~~~tG~~i~vdgG~~  221 (223)
T 3uce_A          187 VGKVGEASDIAMAYLFAIQN--SYMTGTVIDVDGGAL  221 (223)
T ss_dssp             TCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTGG
T ss_pred             CCCccCHHHHHHHHHHHccC--CCCCCcEEEecCCee
Confidence            67788999999999999983  567787888888853

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.64  E-value=9.1e-17  Score=136.71  Aligned_cols=106  Identities=26%  Similarity=0.277  Sum_probs=90.5

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCC--CcEEEEEeCCcccCcchhhh-h----HH-H-----H
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRK--GIRINVLCPEFVQTEMGLKV-A----SK-F-----I   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~--gI~v~~i~PG~v~T~~~~~~-~----~~-~-----~   73 (282)
                      |+|||+||.++..+.++...|++||+++++|+++++. ++++  ||+||+|+||+++|++.... .    .+ +     .
T Consensus       131 g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  210 (253)
T 1hxh_A          131 GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL  210 (253)
T ss_dssp             EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTT
T ss_pred             CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhcc
Confidence            8999999999999999999999999999999999998 8887  99999999999999986541 1    11 1     1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .++++..+|+|+|+.++|++++++.+.+|..+..+|++..
T Consensus       211 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          211 NRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             BTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             CccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            2445678999999999999999888888888888988543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.64  E-value=3e-17  Score=147.82  Aligned_cols=91  Identities=11%  Similarity=-0.028  Sum_probs=79.7

Q ss_pred             CcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------HHHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------KFIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~~~~~~~   77 (282)
                      +|+|||+||+++..+.|..  ..|++||+||.+|||+|+. ++++|||||+|+||+++|++....+.      ....+++
T Consensus       238 gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~  317 (422)
T 3s8m_A          238 GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMK  317 (422)
T ss_dssp             EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhc
Confidence            4899999999998887766  9999999999999999999 99999999999999999999865421      1223678


Q ss_pred             CCCCHHHHHHHHHHhhcCCC
Q 023465           78 GFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~   97 (282)
                      +.++||+|++++.||+++.-
T Consensus       318 r~G~pEdva~~v~~L~sd~l  337 (422)
T 3s8m_A          318 EKGLHEGTIEQLDRLFRERL  337 (422)
T ss_dssp             HTTCCCCHHHHHHHHHHHTT
T ss_pred             CCcChHHHHHHHHHHhcchh
Confidence            89999999999999999853

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.64  E-value=6.6e-16  Score=129.40  Aligned_cols=100  Identities=17%  Similarity=0.070  Sum_probs=76.6

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHH
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVV   86 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a   86 (282)
                      ++||++||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.......  .+..+..+|+|++
T Consensus       123 ~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~dvA  200 (230)
T 3guy_A          123 VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKS--LDTSSFMSAEDAA  200 (230)
T ss_dssp             CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------CCCHHHHH
T ss_pred             CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCC--CCcccCCCHHHHH
Confidence            5999999999999999999999999999999999998 999999999999999999997654322  2346788999999


Q ss_pred             HHHHHhhc-CCCCceEEEEEecCC
Q 023465           87 KGAFELIT-DESKAGSCLWITNRR  109 (282)
Q Consensus        87 ~~~~~l~~-~~~~~~~~~~~~~~g  109 (282)
                      +.++++++ +.+.+.+|..+..+.
T Consensus       201 ~~i~~l~~~~~~~~itg~~~~~~~  224 (230)
T 3guy_A          201 LMIHGALANIGNGYVSDITVNREG  224 (230)
T ss_dssp             HHHHHHCCEETTEEEEEEEEEC--
T ss_pred             HHHHHHHhCcCCCCccceeecCCC
Confidence            99999987 566788998886543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.64  E-value=5.9e-16  Score=132.36  Aligned_cols=101  Identities=25%  Similarity=0.320  Sum_probs=78.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|+|.......  .+..+..+|+|
T Consensus       157 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~p~d  234 (262)
T 3rkr_A          157 KRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK--KSALGAIEPDD  234 (262)
T ss_dssp             TCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------CCCHHH
T ss_pred             CCceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc--cccccCCCHHH
Confidence            458999999999999999999999999999999999998 999999999999999999997654322  23356789999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecC
Q 023465           85 VVKGAFELITDESKAGSCLWITNR  108 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~  108 (282)
                      +|+.++||+++.+...++..+..+
T Consensus       235 vA~~v~~l~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          235 IADVVALLATQADQSFISEVLVRP  258 (262)
T ss_dssp             HHHHHHHHHTCCTTCCEEEEEEEC
T ss_pred             HHHHHHHHhcCccccccCcEEecc
Confidence            999999999998888877766543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.63  E-value=6.4e-16  Score=131.01  Aligned_cols=98  Identities=21%  Similarity=0.334  Sum_probs=81.5

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HH----HHhhhCCC--
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SK----FIDLMGGF--   79 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~----~~~~~~~~--   79 (282)
                      |+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|..... +.    ......+.  
T Consensus       135 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  214 (247)
T 2jah_A          135 GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRK  214 (247)
T ss_dssp             CEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCC
T ss_pred             CEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCC
Confidence            8999999999999999999999999999999999998 9999999999999999999865321 11    11111344  


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      .+|||+++.++|++++.+.+.++...
T Consensus       215 ~~pedvA~~v~~l~s~~~~~~~~~i~  240 (247)
T 2jah_A          215 LQAQDIAEAVRYAVTAPHHATVHEIF  240 (247)
T ss_dssp             BCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             CCHHHHHHHHHHHhCCCccCccceEE
Confidence            89999999999999988776665443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.63  E-value=9.8e-17  Score=152.44  Aligned_cols=102  Identities=23%  Similarity=0.316  Sum_probs=85.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      ++|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||. +|+|.....++   ...+..+|++
T Consensus       445 ~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---~~~~~~~pe~  520 (604)
T 2et6_A          445 QFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---QDKNLYHADQ  520 (604)
T ss_dssp             TCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------CCSSCGGG
T ss_pred             CCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---hhccCCCHHH
Confidence            469999999999999999999999999999999999999 999999999999996 99987542211   1234579999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++.++||+++.+. .+|..+..+|++.
T Consensus       521 vA~~v~~L~s~~~~-itG~~~~vdGG~~  547 (604)
T 2et6_A          521 VAPLLVYLGTDDVP-VTGETFEIGGGWI  547 (604)
T ss_dssp             THHHHHHTTSTTCC-CCSCEEEEETTEE
T ss_pred             HHHHHHHHhCCccC-CCCcEEEECCCee
Confidence            99999999999888 8998888888853

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.63  E-value=2e-16  Score=135.15  Aligned_cols=108  Identities=27%  Similarity=0.208  Sum_probs=91.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-HhhhCCCCCHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-IDLMGGFVPME   83 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-~~~~~~~~~~~   83 (282)
                      +.|+|||+||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....+.+ ..++++..+|+
T Consensus       131 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  210 (260)
T 1nff_A          131 GRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPV  210 (260)
T ss_dssp             TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHH
T ss_pred             CCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHH
Confidence            358999999999999999999999999999999999998 9999999999999999999864111110 12445678999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      |+++.+++++++.+.+.+|..+..+|+...
T Consensus       211 dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          211 EVSNLVVYLASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            999999999998888888888888888644

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.63  E-value=7.3e-17  Score=142.19  Aligned_cols=106  Identities=25%  Similarity=0.203  Sum_probs=89.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-Hh--hhCCCCCH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-ID--LMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-~~--~~~~~~~~   82 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+|| ++|+|......+. ..  ...+..+|
T Consensus       171 ~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~p  249 (322)
T 3qlj_A          171 DGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAP  249 (322)
T ss_dssp             CEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCG
T ss_pred             CcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCH
Confidence            48999999999999999999999999999999999998 99999999999999 9999875432211 11  11245799


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +|+++.++||+++.+.+.+|..+..||+...
T Consensus       250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             GGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            9999999999999999999999999998644

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.63  E-value=3e-16  Score=134.84  Aligned_cols=105  Identities=22%  Similarity=0.224  Sum_probs=83.2

Q ss_pred             CCcEEEEEcCCCccCCCC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~------~~~~   76 (282)
                      +.|+||++||.++..+.+ ....|++||+|+++|+++|+. ++++||+||+|+||+++|++..... ++.      ..++
T Consensus       158 ~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  237 (272)
T 4e3z_A          158 QGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPM  237 (272)
T ss_dssp             CCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTT
T ss_pred             CCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCc
Confidence            468999999999987766 678899999999999999998 9999999999999999999865321 111      1144


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      .+..+|+|+++.++|++++.+.+.+|..+..+|+
T Consensus       238 ~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          238 QRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            5678899999999999999888888888888876

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.63  E-value=2.5e-16  Score=135.41  Aligned_cols=105  Identities=23%  Similarity=0.272  Sum_probs=89.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHH-----H
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKF-----I   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~-----~   73 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. ++++||+||+|+||+++|++.....       ...     .
T Consensus       133 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
T 1yde_A          133 QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA  212 (270)
T ss_dssp             TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT
T ss_pred             CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhc
Confidence            48999999999988889999999999999999999998 9999999999999999999864321       011     1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .++++..+|+|+++.++||+++ +.+.+|..+..+|++.
T Consensus       213 ~p~~r~~~p~dva~~v~~L~s~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          213 QPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             STTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHccc-CCCcCCCEEEECCCee
Confidence            2557788999999999999998 6788888888899864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=2.9e-16  Score=135.26  Aligned_cols=105  Identities=22%  Similarity=0.247  Sum_probs=87.0

Q ss_pred             cEEEEEcCCCc-cCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-------------hHHH
Q 023465            8 GVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-------------ASKF   72 (282)
Q Consensus         8 g~Iv~isS~~~-~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-------------~~~~   72 (282)
                      |+|||+||.++ ..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++....             ....
T Consensus       141 g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  220 (278)
T 1spx_A          141 GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM  220 (278)
T ss_dssp             CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH
T ss_pred             CeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHH
Confidence            89999999998 88889999999999999999999998 999999999999999999986431             0111


Q ss_pred             H--hhhCCCCCHHHHHHHHHHhhcCCCCc-eEEEEEecCCccc
Q 023465           73 I--DLMGGFVPMEMVVKGAFELITDESKA-GSCLWITNRRGME  112 (282)
Q Consensus        73 ~--~~~~~~~~~~~~a~~~~~l~~~~~~~-~~~~~~~~~g~~~  112 (282)
                      .  .+++++.+|+|+++.++|++++++.+ .+|..+..+|+..
T Consensus       221 ~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~  263 (278)
T 1spx_A          221 KECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  263 (278)
T ss_dssp             HHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcc
Confidence            1  14567889999999999999987665 7888888888853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.62  E-value=1.1e-15  Score=130.22  Aligned_cols=109  Identities=29%  Similarity=0.326  Sum_probs=91.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH------hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI------DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~------~~~~   77 (282)
                      .|+||++||..+..+.++...|++||+|++.|+++++. ++++||+||+|+||+++|++.....  ++..      .++.
T Consensus       137 ~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  216 (261)
T 1gee_A          137 KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG  216 (261)
T ss_dssp             CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS
T ss_pred             CCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999998 9999999999999999999875431  1111      1345


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +..+|+|+++.+++++++.+.+.+|..+..+|++...+
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  254 (261)
T 1gee_A          217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYP  254 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcccCC
Confidence            67899999999999999877778888888888865543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.61  E-value=1.5e-16  Score=151.25  Aligned_cols=101  Identities=23%  Similarity=0.297  Sum_probs=86.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+|| ++|+|.....++   ...+..+||+
T Consensus       141 ~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~---~~~~~~~pe~  216 (604)
T 2et6_A          141 KYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP---PMLEKLGPEK  216 (604)
T ss_dssp             TCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH---HHHTTCSHHH
T ss_pred             CCCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh---hhhccCCHHH
Confidence            359999999999999999999999999999999999999 99999999999998 699986542111   1113469999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.++||+++. .+.+|..+..+|++
T Consensus       217 vA~~v~~L~s~~-~~itG~~~~vdgG~  242 (604)
T 2et6_A          217 VAPLVLYLSSAE-NELTGQFFEVAAGF  242 (604)
T ss_dssp             HHHHHHHHTSSS-CCCCSCEEEEETTE
T ss_pred             HHHHHHHHhCCc-ccCCCCEEEECCCe
Confidence            999999999988 78888888888874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.61  E-value=3.8e-16  Score=131.84  Aligned_cols=103  Identities=21%  Similarity=0.225  Sum_probs=87.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++  ++||+||+|+||+++|+|.....+.  ....+..+|+
T Consensus       126 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~  203 (241)
T 1dhr_A          126 GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--ADFSSWTPLE  203 (241)
T ss_dssp             EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--SCGGGSEEHH
T ss_pred             CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--hhhccCCCHH
Confidence            38999999999999999999999999999999999998 98  8999999999999999987542111  1122346899


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      |+|+.+++++++.+.+.+|.++..+|+.
T Consensus       204 ~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          204 FLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            9999999999998888888777777664

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.61  E-value=1.9e-16  Score=134.65  Aligned_cols=107  Identities=15%  Similarity=0.135  Sum_probs=81.1

Q ss_pred             CCcEEEEEcCCCcc----------------------------CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEe
Q 023465            6 KPGVIINMGSSAGL----------------------------YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLC   56 (282)
Q Consensus         6 ~~g~Iv~isS~~~~----------------------------~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~   56 (282)
                      +.|+|||+||.++.                            .+.++...|++||+|++.|+++++. ++++||+||+|+
T Consensus       105 ~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  184 (257)
T 1fjh_A          105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIA  184 (257)
T ss_dssp             SSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEE
T ss_pred             CCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence            35899999999887                            3445778999999999999999998 999999999999


Q ss_pred             CCcccCcchhhh-hHHH--------HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           57 PEFVQTEMGLKV-ASKF--------IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        57 PG~v~T~~~~~~-~~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ||+++|++.... ....        ..++.+..+|+|+|+.+++++++++.+.+|..+..+|++.
T Consensus       185 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          185 PGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             ECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             eCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            999999987543 1111        1134567899999999999999887788888888888853

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.60  E-value=2.5e-16  Score=134.46  Aligned_cols=102  Identities=22%  Similarity=0.202  Sum_probs=78.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH--H---------H
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK--F---------I   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~--~---------~   73 (282)
                      +.|+|||+||.++..+. ....|++||+|+++|+++++. ++++||+||+|+||+++|+|.......  .         .
T Consensus       140 ~~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2qq5_A          140 GQGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFK  218 (260)
T ss_dssp             TCCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------
T ss_pred             CCcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHH
Confidence            35899999999887644 468999999999999999998 999999999999999999986432110  0         1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCC-ceEEEEEecC
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESK-AGSCLWITNR  108 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~-~~~~~~~~~~  108 (282)
                      .++.+..+|||+++.++||+++++. +.+|..+..+
T Consensus       219 ~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          219 SAFSSAETTELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             ---CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             hhhccCCCHHHHHHHHHHHhcCcccccccceeechh
Confidence            1223345899999999999998864 6777777544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.60  E-value=2.4e-16  Score=140.81  Aligned_cols=89  Identities=10%  Similarity=-0.011  Sum_probs=79.0

Q ss_pred             CcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccCC-CcEEEEEeCCcccCcchhhhh--H----HHHhhh
Q 023465            7 PGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRK-GIRINVLCPEFVQTEMGLKVA--S----KFIDLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~~-gI~v~~i~PG~v~T~~~~~~~--~----~~~~~~   76 (282)
                      +|+|||+||+.+..+.+..  ..|++||+||++|||+|+. |+++ |||||+|+||+++|++....+  +    ....++
T Consensus       223 gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~m  302 (405)
T 3zu3_A          223 GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVM  302 (405)
T ss_dssp             EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHH
T ss_pred             CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHH
Confidence            4899999999999888877  9999999999999999999 9999 999999999999999876432  1    123367


Q ss_pred             CCCCCHHHHHHHHHHhhcC
Q 023465           77 GGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~   95 (282)
                      ++.++||++++++.||+++
T Consensus       303 kr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          303 KEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHTCCCCHHHHHHHHHHH
T ss_pred             hcCCCcHHHHHHHHHHHhc
Confidence            8899999999999999998

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.59  E-value=2.9e-16  Score=133.39  Aligned_cols=104  Identities=22%  Similarity=0.226  Sum_probs=60.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-H------HhhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-F------IDLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~------~~~~~   77 (282)
                      +.|+|||+||.++.   ++...|++||+|+++|+++++. ++++||+||+|+||+++|++......+ .      ..++.
T Consensus       139 ~~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (253)
T 3qiv_A          139 GGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLS  215 (253)
T ss_dssp             TCEEEEEECC--------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------
T ss_pred             CCCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCC
Confidence            36899999999876   5567899999999999999998 999999999999999999987543211 1      11445


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +..+|+|+++.++|++++.+.+.+|..+..+|+..
T Consensus       216 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  250 (253)
T 3qiv_A          216 RMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQI  250 (253)
T ss_dssp             ----CCHHHHHHHHHHSGGGTTCCSCEEEC-----
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCCEEEECCCee
Confidence            67899999999999999988888998888888854

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.59  E-value=2.1e-15  Score=128.01  Aligned_cols=100  Identities=23%  Similarity=0.229  Sum_probs=74.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc-Ccchhhh---hHHH-Hh--hhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ-TEMGLKV---ASKF-ID--LMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~~---~~~~-~~--~~~   77 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++|||||+|+||+++ |+|....   .++. ..  ...
T Consensus       125 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~  204 (248)
T 3asu_A          125 NHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNT  204 (248)
T ss_dssp             TCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------
T ss_pred             CCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhcc
Confidence            358999999999999999999999999999999999998 99999999999999999 9986421   1111 11  112


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      ...+|+|+++.++|++++.+ ..++..+.
T Consensus       205 ~~~~p~dvA~~v~~l~s~~~-~~~g~~i~  232 (248)
T 3asu_A          205 VALTPEDVSEAVWWVSTLPA-HVNINTLE  232 (248)
T ss_dssp             CCBCHHHHHHHHHHHHHSCT-TCCCCEEE
T ss_pred             CCCCHHHHHHHHHHHhcCCc-cceeeEEE
Confidence            35799999999999999754 44444443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.59  E-value=2.7e-15  Score=129.04  Aligned_cols=103  Identities=20%  Similarity=0.267  Sum_probs=77.4

Q ss_pred             Cc-EEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH---H-HHh--hhCC
Q 023465            7 PG-VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS---K-FID--LMGG   78 (282)
Q Consensus         7 ~g-~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~---~-~~~--~~~~   78 (282)
                      .| +|||+||.++..+.++...|++||+|+++|+++++. ++++|||||+|+||+++|+|......   + ...  ....
T Consensus       149 ~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  228 (272)
T 2nwq_A          149 AGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAH  228 (272)
T ss_dssp             TTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCC
T ss_pred             CCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCC
Confidence            47 999999999999999999999999999999999998 99999999999999999998643211   1 111  1123


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+|+|+|+.++|++++. ...++..+..+++
T Consensus       229 ~~~pedvA~~v~~l~s~~-~~~~g~~i~v~~~  259 (272)
T 2nwq_A          229 PIQPEDIAETIFWIMNQP-AHLNINSLEIMPV  259 (272)
T ss_dssp             CBCHHHHHHHHHHHHTSC-TTEEEEEEEEEET
T ss_pred             CCCHHHHHHHHHHHhCCC-ccCccceEEEeec
Confidence            579999999999999974 4566666655554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.58  E-value=1e-15  Score=136.07  Aligned_cols=102  Identities=16%  Similarity=0.302  Sum_probs=85.6

Q ss_pred             CCCcEEEEEcCCCccCC--CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCc-ccCcchhhhhHHHHhhhCCCC
Q 023465            5 KKPGVIINMGSSAGLYP--MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF-VQTEMGLKVASKFIDLMGGFV   80 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~-v~T~~~~~~~~~~~~~~~~~~   80 (282)
                      ++.|+|||+||.++..+  .++...|++||+|+++|+++|+. ++ +||+||+|+||+ ++|++......  ..++.+..
T Consensus       178 ~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~--~~~~~r~~  254 (346)
T 3kvo_A          178 SKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG--PGIESQCR  254 (346)
T ss_dssp             CSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC----CGGGCB
T ss_pred             CCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc--ccccccCC
Confidence            34689999999999877  78899999999999999999998 98 999999999995 99998754321  12345678


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +|+|+|+.++||+++ +.+.+|.++ .|+++
T Consensus       255 ~pedvA~~v~~L~s~-~~~itG~~i-vdgg~  283 (346)
T 3kvo_A          255 KVDIIADAAYSIFQK-PKSFTGNFV-IDENI  283 (346)
T ss_dssp             CTHHHHHHHHHHHTS-CTTCCSCEE-EHHHH
T ss_pred             CHHHHHHHHHHHHhc-CCCCCceEE-ECCcE
Confidence            999999999999999 778888887 56663

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.58  E-value=3.4e-15  Score=126.35  Aligned_cols=107  Identities=23%  Similarity=0.327  Sum_probs=90.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh-hh-HHHH------hhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK-VA-SKFI------DLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~-~~-~~~~------~~~   76 (282)
                      +.|+||++||.++..+.++...|++||++++.|+++++. +.++||+||+|+||++.|++... .. +...      .++
T Consensus       133 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  212 (250)
T 2cfc_A          133 GAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ  212 (250)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT
T ss_pred             CCCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC
Confidence            358999999999998999999999999999999999998 99999999999999999998654 11 1111      144


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .++.+|+|+++.+++++++.+.+.+|..+..+|++.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCcee
Confidence            567899999999999999888888888888888753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.58  E-value=1.2e-15  Score=129.56  Aligned_cols=101  Identities=20%  Similarity=0.224  Sum_probs=84.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+++++. ++  ++||+||+|+||+++|++.......  .+..+..+|+
T Consensus       137 ~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~  214 (251)
T 3orf_A          137 GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD--ANFDDWTPLS  214 (251)
T ss_dssp             EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT--SCGGGSBCHH
T ss_pred             CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc--ccccccCCHH
Confidence            48999999999999999999999999999999999998 87  8999999999999999987543221  2345678999


Q ss_pred             HHHHHHHHhhcC-CCCceEEEEEecCC
Q 023465           84 MVVKGAFELITD-ESKAGSCLWITNRR  109 (282)
Q Consensus        84 ~~a~~~~~l~~~-~~~~~~~~~~~~~g  109 (282)
                      |+++.+++++++ .+.+.+|..+...+
T Consensus       215 dva~~i~~l~~~~~~~~~tG~~i~v~~  241 (251)
T 3orf_A          215 EVAEKLFEWSTNSDSRPTNGSLVKFET  241 (251)
T ss_dssp             HHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHHHHHHhcCccccCCcceEEEEec
Confidence            999999999998 66666665554433

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.58  E-value=3.8e-15  Score=126.11  Aligned_cols=104  Identities=23%  Similarity=0.236  Sum_probs=88.2

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHH-HH------hhhC
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASK-FI------DLMG   77 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~-~~------~~~~   77 (282)
                      ++||++||.++..+.++...|++||++++.|+++++. +.  ++||++|+|+||+++|++....... ..      .+++
T Consensus       135 ~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (251)
T 1zk4_A          135 ASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMG  214 (251)
T ss_dssp             EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTS
T ss_pred             CEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCC
Confidence            7999999999999999999999999999999999987 77  8999999999999999987543211 11      1345


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +..+|+|+++.+++++++.+.+.+|..+..+|++
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            6789999999999999987777788788878875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.57  E-value=1.4e-15  Score=129.65  Aligned_cols=106  Identities=21%  Similarity=0.239  Sum_probs=87.7

Q ss_pred             CcEEEEEcCCCccCCCCC-------ChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH-----
Q 023465            7 PGVIINMGSSAGLYPMYN-------DPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI-----   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-------~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~-----   73 (282)
                      .|+||++||..+..+.+.       ...|++||++++.|+++++. ++++||+||+|+||+++|++.....+...     
T Consensus       144 ~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  223 (265)
T 1h5q_A          144 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS  223 (265)
T ss_dssp             CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH
T ss_pred             CceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHh
Confidence            489999999988765542       78999999999999999998 99999999999999999998765322211     


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                       .++.++.+|+|+++.+++++++.+.+.+|..+..+|+..
T Consensus       224 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          224 NIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             cCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence             144567899999999999999887778888788888754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.57  E-value=1.7e-15  Score=127.65  Aligned_cols=106  Identities=25%  Similarity=0.330  Sum_probs=88.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+||++||.++..+.++...|++||+++++|+++++. +.++||+||+|+||+++|++.....+...      .++.+
T Consensus       129 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  208 (244)
T 1edo_A          129 RKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGR  208 (244)
T ss_dssp             TCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCS
T ss_pred             CCCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCC
Confidence            358999999999988889999999999999999999998 99999999999999999998754332221      13456


Q ss_pred             CCCHHHHHHHHHHhh-cCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELI-TDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~-~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.+++++ ++.+.+.+|..+..+|++
T Consensus       209 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            789999999999999 555667778777778774

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.57  E-value=2.1e-15  Score=127.18  Aligned_cols=105  Identities=26%  Similarity=0.425  Sum_probs=88.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHHH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKFI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~~--~~~~   77 (282)
                      .|+||++||.++..+.++...|++||++++.|+++++. ++++||++|+|+||++.|++.....      ..+.  .++.
T Consensus       128 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  207 (244)
T 3d3w_A          128 PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG  207 (244)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTC
T ss_pred             CcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCC
Confidence            58999999999998889999999999999999999998 9999999999999999999865321      1111  1456


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+|+|+++.+++++++.+.+.+|..+..++++
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            7789999999999999987777777777777774

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.57  E-value=2.2e-15  Score=127.21  Aligned_cols=106  Identities=30%  Similarity=0.349  Sum_probs=80.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+|||+||.++..+.++...|++||++++.|+++++. ++++||++|+|+||+++|++.....+...      .++.+
T Consensus       133 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  212 (247)
T 2hq1_A          133 KSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKR  212 (247)
T ss_dssp             TCEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSS
T ss_pred             CCcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCC
Confidence            358999999999988889999999999999999999998 99999999999999999998654322211      13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ..+|+|+++.+++++++++.+.+|..+..++++
T Consensus       213 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          213 FGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            789999999999999987777777777777764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.56  E-value=3.1e-15  Score=127.69  Aligned_cols=106  Identities=23%  Similarity=0.218  Sum_probs=83.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH----H--hhh-C
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF----I--DLM-G   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~----~--~~~-~   77 (282)
                      +.|+|||+||..+..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++.....++.    .  .+. .
T Consensus       148 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  227 (265)
T 2o23_A          148 QRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPS  227 (265)
T ss_dssp             CCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSC
T ss_pred             CCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcC
Confidence            458999999999988889999999999999999999998 9999999999999999999875432221    1  133 5


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +..+|+|+++.+++++++  .+.+|..+..+|++..
T Consensus       228 ~~~~~~dva~~~~~l~~~--~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          228 RLGDPAEYAHLVQAIIEN--PFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             SCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC
T ss_pred             CCCCHHHHHHHHHHHhhc--CccCceEEEECCCEec
Confidence            678999999999999964  4667777777888643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.56  E-value=2.4e-15  Score=126.51  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=85.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++++. ++  ++||+||+|+||+++|+|.......  ....+..+|+
T Consensus       122 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~  199 (236)
T 1ooe_A          122 GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--ADHSSWTPLS  199 (236)
T ss_dssp             EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--CCGGGCBCHH
T ss_pred             CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC--ccccccCCHH
Confidence            38999999999999999999999999999999999998 88  8999999999999999986542111  1123457899


Q ss_pred             HHHHHHHHhh-cCCCCceEEEEEecCCccc
Q 023465           84 MVVKGAFELI-TDESKAGSCLWITNRRGME  112 (282)
Q Consensus        84 ~~a~~~~~l~-~~~~~~~~~~~~~~~g~~~  112 (282)
                      |+|+.+++++ ++.+.+.+|..+..+++..
T Consensus       200 dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          200 FISEHLLKWTTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             HHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence            9999998555 7777777777777666643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.56  E-value=2.1e-15  Score=130.42  Aligned_cols=105  Identities=30%  Similarity=0.341  Sum_probs=86.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~~   79 (282)
                      .|+||++||.++..+.++...|++||++++.|+++++. +.++||+||+|+||+++|++.....+...      .+..+.
T Consensus       172 ~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  251 (285)
T 2c07_A          172 YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRM  251 (285)
T ss_dssp             CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSC
T ss_pred             CCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCC
Confidence            58999999999988889999999999999999999998 99999999999999999998654322221      134567


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+|+|+|+.+++++++.+.+.+|..+..+|++
T Consensus       252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          252 GTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            89999999999999988777788778778774

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.56  E-value=6.5e-15  Score=124.19  Aligned_cols=103  Identities=19%  Similarity=0.119  Sum_probs=88.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+||++||.++..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++......+.   ..+..+|+|
T Consensus       136 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~d  212 (244)
T 2bd0_A          136 HSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM---QALMMMPED  212 (244)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT---GGGSBCHHH
T ss_pred             CCCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc---cccCCCHHH
Confidence            358999999999999999999999999999999999998 9999999999999999999875432111   125689999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.+++++++++.+.++..+..+++.
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHHHHHHHhCCccccchheEEecccc
Confidence            999999999999888888887766653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.55  E-value=2.5e-15  Score=128.20  Aligned_cols=106  Identities=30%  Similarity=0.325  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~~   79 (282)
                      .|+||++||.++..+.++...|++||++++.|+++++. ++++||++|+|+||++.|++.....+...      .++.++
T Consensus       144 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  223 (264)
T 2pd6_A          144 RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHL  223 (264)
T ss_dssp             CEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSC
T ss_pred             CceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCC
Confidence            58999999999988899999999999999999999998 99999999999999999998654322211      134567


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+|+|+++.+++++++.+.+.+|..+..+|+..
T Consensus       224 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  256 (264)
T 2pd6_A          224 GDPEDVADVVAFLASEDSGYITGTSVEVTGGLF  256 (264)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCce
Confidence            899999999999999877777888888888854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.55  E-value=6.9e-15  Score=125.12  Aligned_cols=108  Identities=28%  Similarity=0.408  Sum_probs=89.7

Q ss_pred             CCcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh-hhh-HHH----H--h
Q 023465            6 KPGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL-KVA-SKF----I--D   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~-~~~-~~~----~--~   74 (282)
                      +.++||++||..+..+.++.  ..|++||++++.|+++++. ++++||+||+|+||+++|++.. ... ++.    .  .
T Consensus       141 ~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  220 (260)
T 3awd_A          141 KQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT  220 (260)
T ss_dssp             TCEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTC
T ss_pred             CCCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcC
Confidence            35899999999998877777  8999999999999999998 9999999999999999999875 221 111    1  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++.+..+|+|+++.+++++++.+.+.+|..+..+|++..
T Consensus       221 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          221 PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCceec
Confidence            445678999999999999998777778878888888643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.55  E-value=6.6e-15  Score=124.83  Aligned_cols=108  Identities=29%  Similarity=0.421  Sum_probs=90.0

Q ss_pred             CCcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH----H--h
Q 023465            6 KPGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF----I--D   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~----~--~   74 (282)
                      +.|+||++||.++..+.+..  ..|++||++++.|+++++. ++++||++|+|+||++.|++.....  ++.    .  .
T Consensus       135 ~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (254)
T 2wsb_A          135 GAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT  214 (254)
T ss_dssp             TCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS
T ss_pred             CCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC
Confidence            35899999999998887877  8999999999999999998 9999999999999999999875321  111    1  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++.+..+|+|+++.+++++++.+.+.+|..+..+|++..
T Consensus       215 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          215 PMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCEec
Confidence            445678999999999999998777778888888888543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.55  E-value=8.3e-15  Score=123.84  Aligned_cols=92  Identities=20%  Similarity=0.215  Sum_probs=61.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh--hhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID--LMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--~~~~~~~~~   83 (282)
                      +|+||++||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.....+....  +..++.+|+
T Consensus       125 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~  204 (245)
T 3e9n_A          125 SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPK  204 (245)
T ss_dssp             TCEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHH
T ss_pred             CCeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHH
Confidence            38999999999999999999999999999999999998 999999999999999999997654333222  233568999


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      |+|+.+++++++...
T Consensus       205 dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          205 EIANAIRFVIDAGET  219 (245)
T ss_dssp             HHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHcCCCc
Confidence            999999999987764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.54  E-value=1.7e-14  Score=123.43  Aligned_cols=99  Identities=37%  Similarity=0.657  Sum_probs=78.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHh--cc-ccCCCcEEEEEeCCcccCcchhhhhH------------H
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL--TP-YKRKGIRINVLCPEFVQTEMGLKVAS------------K   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~l--a~-~~~~gI~v~~i~PG~v~T~~~~~~~~------------~   71 (282)
                      .|+|||+||.++..+.++...|++||+|+++|++++  +. ++++|||||+|+||+++|++......            .
T Consensus       132 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  211 (267)
T 2gdz_A          132 GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDH  211 (267)
T ss_dssp             CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHH
T ss_pred             CCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHH
Confidence            589999999999999999999999999999999996  45 88999999999999999998643210            0


Q ss_pred             HHhh--hCCCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           72 FIDL--MGGFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        72 ~~~~--~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ...+  ..+..+|+|+|+.++++++++...++.+.+
T Consensus       212 ~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v  247 (267)
T 2gdz_A          212 IKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKI  247 (267)
T ss_dssp             HHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEE
T ss_pred             HHHHhccccCCCHHHHHHHHHHHhcCcCCCCcEEEe
Confidence            1111  124679999999999999987544443333

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.54  E-value=8.2e-15  Score=123.19  Aligned_cols=104  Identities=21%  Similarity=0.221  Sum_probs=86.6

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH----h--hh-CCC
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI----D--LM-GGF   79 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~----~--~~-~~~   79 (282)
                      |+||++||..+..+.++...|++||++++.|+++++. ++++||+||+|+||+++|++.....+...    .  ++ .++
T Consensus       128 ~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (242)
T 1uay_A          128 GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRL  207 (242)
T ss_dssp             EEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSC
T ss_pred             eEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccC
Confidence            5999999999988889999999999999999999998 99999999999999999998754332211    1  33 567


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+|+|+++.+++++++  .+.+|..+..+|++..
T Consensus       208 ~~~~dva~~~~~l~~~--~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          208 GRPEEYAALVLHILEN--PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             CCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhcC--CCCCCcEEEEcCCeec
Confidence            8999999999999987  4566666777887644

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.54  E-value=5.2e-15  Score=127.41  Aligned_cols=106  Identities=17%  Similarity=0.214  Sum_probs=88.5

Q ss_pred             CCcEEEEEcCCCccCC--CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH------Hhhh
Q 023465            6 KPGVIINMGSSAGLYP--MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF------IDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~------~~~~   76 (282)
                      +.|+||++||.++..+  .+....|++||++++.|+++++. +++++ +||+|+||+++|++.....++.      ..++
T Consensus       163 ~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~  241 (279)
T 3ctm_A          163 GKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPL  241 (279)
T ss_dssp             TCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTT
T ss_pred             CCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCc
Confidence            3589999999999887  78889999999999999999998 99999 9999999999999864322211      1145


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++..+|+|+++.+++++++.+.+.+|..+..+|++.
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            678899999999999999887788888888888853

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.54  E-value=1.4e-14  Score=121.41  Aligned_cols=99  Identities=20%  Similarity=0.186  Sum_probs=74.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+||++||..+..+.++...|++||+++++|+++++. ++++||++|+|+||+++|++.......    . ...+|+|
T Consensus       128 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~~~~d  202 (234)
T 2ehd_A          128 GGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQ----A-WKLKPED  202 (234)
T ss_dssp             TCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------CCHHH
T ss_pred             CCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccc----c-CCCCHHH
Confidence            458999999999998889999999999999999999998 999999999999999999987542211    1 1579999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCC
Q 023465           85 VVKGAFELITDESKAGSCLWITNRR  109 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g  109 (282)
                      +|+.+++++++++.+.++.....++
T Consensus       203 vA~~~~~l~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          203 VAQAVLFALEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHHHHHHSCCSSCCCEEECCC-
T ss_pred             HHHHHHHHhCCCcccccceEEEeec
Confidence            9999999999988877776654443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.54  E-value=1.8e-14  Score=120.83  Aligned_cols=102  Identities=14%  Similarity=0.072  Sum_probs=85.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVV   86 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a   86 (282)
                      .|+||+++|..+..+.++...|++||+|+++|++++ .++..|||||+|+||+++|+|........  ...+..+|||++
T Consensus       130 ~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l-~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~p~dva  206 (235)
T 3l77_A          130 GGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTF-QIENPDVRFFELRPGAVDTYFGGSKPGKP--KEKGYLKPDEIA  206 (235)
T ss_dssp             TCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHH-HHHCTTSEEEEEEECSBSSSTTTCCSCCC--GGGTCBCHHHHH
T ss_pred             CCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHH-hhcCCCeEEEEEeCCccccccccccCCcc--cccCCCCHHHHH
Confidence            489999999999999999999999999999999999 55567999999999999999976533211  123678999999


Q ss_pred             HHHHHhhcCCCCceEEEEEecCCcc
Q 023465           87 KGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        87 ~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.++||+++.+...++..+..+++.
T Consensus       207 ~~v~~l~~~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          207 EAVRCLLKLPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             HHHHHHHTSCTTCCCCEEEECCTTS
T ss_pred             HHHHHHHcCCCCCccceEEEeeccc
Confidence            9999999999988888777766653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.52  E-value=4e-15  Score=127.17  Aligned_cols=107  Identities=28%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHH------HhhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKF------IDLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~------~~~~~   77 (282)
                      +.++||++||.++..+.+....|++||++++.|+++++. ++++||+||+|+||++.|++..... +.+      ..+++
T Consensus       142 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  221 (266)
T 1xq1_A          142 GCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLG  221 (266)
T ss_dssp             SSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------
T ss_pred             CCcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCC
Confidence            358999999999988888999999999999999999998 9999999999999999999865421 111      12445


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ++.+|+|+++.+++++++++.+.+|..+..+|++.
T Consensus       222 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          222 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            67899999999999999887788888888888853

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.52  E-value=6.8e-15  Score=124.00  Aligned_cols=105  Identities=27%  Similarity=0.395  Sum_probs=87.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~~   79 (282)
                      .++||++||.++..+.++...|++||+++++|+++++. +.++||++|+|+||+++|++.....+...      .+..++
T Consensus       131 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (245)
T 2ph3_A          131 FGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRF  210 (245)
T ss_dssp             CEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSC
T ss_pred             CCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCC
Confidence            58999999999888889999999999999999999998 99999999999999999998754322211      134567


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+|+|+++.+++++++++.+.+|..+..+++.
T Consensus       211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            89999999999999887666777777777764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.52  E-value=7.9e-15  Score=123.81  Aligned_cols=106  Identities=25%  Similarity=0.334  Sum_probs=87.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      +.|+||++||..+..+.++...|++||+++++|+++++. +.++||++|+|+||+++|++.....+...      .+..+
T Consensus       135 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (248)
T 2pnf_A          135 RWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGR  214 (248)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSS
T ss_pred             CCcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCC
Confidence            358999999998888888999999999999999999998 98999999999999999998754322211      13456


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.+|+|+++.+++++++.+.+.+|..+..++++
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          215 FGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            789999999999999887667777777777764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.51  E-value=1.7e-14  Score=125.78  Aligned_cols=91  Identities=27%  Similarity=0.275  Sum_probs=75.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------------
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------------   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------------   73 (282)
                      .|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+++|+|.........            
T Consensus       160 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  239 (301)
T 3tjr_A          160 GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGA  239 (301)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------------
T ss_pred             CcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhh
Confidence            58999999999999999999999999999999999998 99999999999999999999764321100            


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                          .......+|+++|+.+++++..+.
T Consensus       240 ~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          240 FGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccccccCCCCHHHHHHHHHHHHhcCC
Confidence                011235799999999999998765

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.51  E-value=1.7e-14  Score=123.92  Aligned_cols=107  Identities=29%  Similarity=0.298  Sum_probs=89.2

Q ss_pred             CCcEEEEEcCCCccCCCC-CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HH----HHh--
Q 023465            6 KPGVIINMGSSAGLYPMY-NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SK----FID--   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~-~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~----~~~--   74 (282)
                      +.|+||++||..+..+.+ +...|++||++++.|+++++. ++++||++|+|+||++.|++.....   ++    +..  
T Consensus       144 ~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  223 (278)
T 2bgk_A          144 KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA  223 (278)
T ss_dssp             TCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT
T ss_pred             CCCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc
Confidence            358999999999988887 888999999999999999998 9999999999999999999865321   11    111  


Q ss_pred             --hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 --LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 --~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        +..++.+|+|+++.+++++++.+.+.+|..+..+|+..
T Consensus       224 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  263 (278)
T 2bgk_A          224 ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  263 (278)
T ss_dssp             CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccc
Confidence              23567899999999999999877778888888888753

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.51  E-value=3.3e-15  Score=135.29  Aligned_cols=101  Identities=10%  Similarity=-0.041  Sum_probs=83.4

Q ss_pred             CcEEEEEcCCCccCCCCCC--hhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhhhhH------HHHhhh
Q 023465            7 PGVIINMGSSAGLYPMYND--PIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLKVAS------KFIDLM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~--~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~~~~------~~~~~~   76 (282)
                      +|+|||+||+++..+.|..  +.|++||+||++|+|+|+. +++ +|||||+|+||+++|++......      .....+
T Consensus       237 gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~m  316 (418)
T 4eue_A          237 KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVM  316 (418)
T ss_dssp             EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHH
T ss_pred             CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHH
Confidence            5899999999999888887  9999999999999999999 999 99999999999999998764421      123356


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCC
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRR  109 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g  109 (282)
                      ++..++|++++++.+|+++.-..  |..+..|+
T Consensus       317 k~~G~~E~v~e~~~~L~sd~~~~--g~~~~~D~  347 (418)
T 4eue_A          317 KEKNIHENCIMQIERMFSEKIYS--NEKIQFDD  347 (418)
T ss_dssp             HHTTCCCCHHHHHHHHHHHTTSS--SSCCCCCT
T ss_pred             hhcCChHHHHHHHHHHhhccccC--CCccccCC
Confidence            77899999999999999985433  33433444

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.51  E-value=1.4e-14  Score=122.11  Aligned_cols=105  Identities=30%  Similarity=0.400  Sum_probs=88.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--hHH----HH--hhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--ASK----FI--DLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--~~~----~~--~~~~   77 (282)
                      .|+||++||..+..+.++...|++||++++.|+++++. ++++||++|+|+||++.|++....  .+.    ..  .++.
T Consensus       128 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  207 (244)
T 1cyd_A          128 PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR  207 (244)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS
T ss_pred             CeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCcc
Confidence            58999999999998889999999999999999999998 999999999999999999986422  111    11  2446


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+++|+++.+++++++.+.+.+|..+..++++
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          208 KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             CCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence            7789999999999999988777777777777774

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.49  E-value=1.8e-14  Score=124.96  Aligned_cols=104  Identities=17%  Similarity=0.131  Sum_probs=77.1

Q ss_pred             cEEEEEcCCCccCC-------------CCCChhhHhhHHHHHHHHHHhcc-ccCCC--cEEEEEeCCcccCcchhhhhHH
Q 023465            8 GVIINMGSSAGLYP-------------MYNDPIYSASKGGVVLFTRSLTP-YKRKG--IRINVLCPEFVQTEMGLKVASK   71 (282)
Q Consensus         8 g~Iv~isS~~~~~~-------------~~~~~~Y~asKaal~~~t~~la~-~~~~g--I~v~~i~PG~v~T~~~~~~~~~   71 (282)
                      .+|||+||.++..+             .++...|++||+|+++|+++|+. ++++|  |+||+|+||+++|+|.....+.
T Consensus       132 ~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~  211 (291)
T 3rd5_A          132 DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK  211 (291)
T ss_dssp             EEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------
T ss_pred             hheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH
Confidence            48999999988754             34567899999999999999998 88877  9999999999999998654332


Q ss_pred             HHh-----hhCCCC-CHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 FID-----LMGGFV-PMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~~~-----~~~~~~-~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ...     +..+.. +|+++|+.++|+++++  +.+|.++..+|++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          212 LGDALMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGPRFGYLG  257 (291)
T ss_dssp             -------------CHHHHHHHHHHHHHHHSC--CCTTCEEEETTSSSS
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCcccccC
Confidence            221     233444 4999999999999984  677888888888643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.48  E-value=1.8e-14  Score=125.36  Aligned_cols=107  Identities=19%  Similarity=0.143  Sum_probs=86.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc-chhhhhH------HHH--h
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE-MGLKVAS------KFI--D   74 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~-~~~~~~~------~~~--~   74 (282)
                      ++.++||++||..+..+.++...|++||++++.|+++++. ++++||+||+|+||++.|+ +.....+      ...  .
T Consensus       154 ~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  233 (302)
T 1w6u_A          154 QKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI  233 (302)
T ss_dssp             TCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC
T ss_pred             cCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC
Confidence            3458999999999988889999999999999999999998 9999999999999999997 4332111      111  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+..+|+|+++.+++++++.+.+.+|..+..+++.
T Consensus       234 p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  270 (302)
T 1w6u_A          234 PCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGE  270 (302)
T ss_dssp             TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCe
Confidence            4456789999999999999987777778777778874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.48  E-value=3.7e-14  Score=120.19  Aligned_cols=106  Identities=21%  Similarity=0.196  Sum_probs=87.5

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHHH----H--hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASKF----I--DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~~----~--~~~~   77 (282)
                      +.++||++||.++..+.++...|++||++++.|+++++. ++++||++|+|+||++.|++.... .+..    .  .++.
T Consensus       137 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T 1fmc_A          137 GGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR  216 (255)
T ss_dssp             TCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC
T ss_pred             CCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcc
Confidence            358999999999998889999999999999999999998 999999999999999999986432 1111    1  1445


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++.+|+|+++.+++++++.+.+.+|..+..+++.
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  250 (255)
T 1fmc_A          217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCCCHHHHHHHHHHHhCCccccCCCcEEEECCce
Confidence            6789999999999999887666667666666664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.47  E-value=1.3e-14  Score=138.28  Aligned_cols=102  Identities=18%  Similarity=0.264  Sum_probs=81.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      ++.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||++ |+|.....+.   ...+..+|+
T Consensus       151 ~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~---~~~~~~~pe  226 (613)
T 3oml_A          151 QNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD---ILFNELKPK  226 (613)
T ss_dssp             TTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH---HHHTTCCGG
T ss_pred             cCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch---hhhhcCCHH
Confidence            3469999999999999999999999999999999999998 9999999999999975 6665432211   122456999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           84 MVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ++++.++||+++. .+.+|..+..+|++
T Consensus       227 dvA~~v~~L~s~~-~~~tG~~i~vdGG~  253 (613)
T 3oml_A          227 LIAPVVAYLCHES-CEDNGSYIESAAGW  253 (613)
T ss_dssp             GTHHHHHHTTSTT-CCCCSCEEEEETTE
T ss_pred             HHHHHHHHhcCCC-cCCCceEEEECCCe
Confidence            9999999999998 77888888888774

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.47  E-value=6.2e-14  Score=118.20  Aligned_cols=95  Identities=19%  Similarity=0.304  Sum_probs=73.9

Q ss_pred             CcEEEEEcCCCccCCC-------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCC
Q 023465            7 PGVIINMGSSAGLYPM-------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~   78 (282)
                      .++||++||..+..+.       ++...|++||++++.|+++++. ++++||+||+|+||+++|+|...         ..
T Consensus       144 ~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~~  214 (250)
T 1yo6_A          144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------NA  214 (250)
T ss_dssp             TCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------
T ss_pred             CcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------CC
Confidence            5899999999987765       6788999999999999999998 99999999999999999998643         13


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+|+++++.+++++++.....+|.++..+++
T Consensus       215 ~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          215 ALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             CCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence            57899999999999998877777777776665

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.46  E-value=3.1e-14  Score=120.75  Aligned_cols=104  Identities=18%  Similarity=0.183  Sum_probs=87.0

Q ss_pred             cEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCCC
Q 023465            8 GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGGF   79 (282)
Q Consensus         8 g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~~   79 (282)
                      ++||++||..+.. +.++...|++||++++.|+++++. ++++||++|+|+||++.|++.....+...      .++.+.
T Consensus       143 ~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  222 (258)
T 3afn_B          143 SAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRF  222 (258)
T ss_dssp             EEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSC
T ss_pred             cEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcC
Confidence            8999999998877 788999999999999999999998 99999999999999999998754322211      144567


Q ss_pred             CCHHHHHHHHHHhhcCCCC-ceEEEEEecCCcc
Q 023465           80 VPMEMVVKGAFELITDESK-AGSCLWITNRRGM  111 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~-~~~~~~~~~~g~~  111 (282)
                      .+|+|+++.+++++++.+. +.+|..+..+++.
T Consensus       223 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          223 GTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             BCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             CCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            8999999999999987655 6677777778775

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.46  E-value=3.4e-14  Score=120.68  Aligned_cols=102  Identities=24%  Similarity=0.276  Sum_probs=80.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HHHHhhh--C
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SKFIDLM--G   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~~~~~~--~   77 (282)
                      .|+|||+||.++..+.++...|++||+++++|+++++. +.++||+||+|+||+++|+|.....      +......  .
T Consensus       130 ~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (254)
T 1sby_A          130 GGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH  209 (254)
T ss_dssp             CEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTS
T ss_pred             CCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcC
Confidence            58999999999999999999999999999999999998 8888999999999999999865321      1111111  1


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      ...+|||+|+.++++++.   ..+|..+..+|+.
T Consensus       210 ~~~~~~dvA~~i~~~~~~---~~~G~~~~v~gG~  240 (254)
T 1sby_A          210 PTQTSEQCGQNFVKAIEA---NKNGAIWKLDLGT  240 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHH---CCTTCEEEEETTE
T ss_pred             CCCCHHHHHHHHHHHHHc---CCCCCEEEEeCCc
Confidence            235899999999999863   3445556666663

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.46  E-value=2e-14  Score=126.42  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=82.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||++ |+|.....+..   ..+..+|++
T Consensus       142 ~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~---~~~~~~p~d  217 (319)
T 1gz6_A          142 NYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED---LVEALKPEY  217 (319)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH---HHHHSCGGG
T ss_pred             CCCEEEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh---hhccCCHHH
Confidence            358999999999988889999999999999999999998 9999999999999998 88765422111   112368999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.++|++++.+ +.+|.++..+|++
T Consensus       218 vA~~~~~l~s~~~-~~tG~~~~v~GG~  243 (319)
T 1gz6_A          218 VAPLVLWLCHESC-EENGGLFEVGAGW  243 (319)
T ss_dssp             THHHHHHHTSTTC-CCCSCEEEEETTE
T ss_pred             HHHHHHHHhCchh-hcCCCEEEECCCe
Confidence            9999999998743 5677777777764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.45  E-value=9.2e-14  Score=120.96  Aligned_cols=106  Identities=19%  Similarity=0.165  Sum_probs=87.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh-hhh---HHH----H--hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL-KVA---SKF----I--DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~-~~~---~~~----~--~~   75 (282)
                      .|+||++||.+ ..+.+....|++||+++.+|+++++. +.++||+||+|+||++.|++.. ...   ++.    .  .+
T Consensus       151 ~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p  229 (303)
T 1yxm_A          151 GGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP  229 (303)
T ss_dssp             CEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST
T ss_pred             CCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc
Confidence            58999999998 77888999999999999999999998 9999999999999999999531 111   111    1  13


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.+..+|+|+++.+++++++.+.+.+|..+..+|+...
T Consensus       230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence            45678999999999999998877888888888888543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.45  E-value=1.4e-13  Score=118.58  Aligned_cols=102  Identities=23%  Similarity=0.259  Sum_probs=80.3

Q ss_pred             CcEEEEEcCCCcc--CCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhh----HHHH--hh
Q 023465            7 PGVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVA----SKFI--DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~--~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~----~~~~--~~   75 (282)
                      .|+||++||..+.  .+.++...|++||++++.|+++++. ++  ..||++|+|+||+++|++.....    ....  ..
T Consensus       164 ~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  243 (279)
T 1xg5_A          164 DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYE  243 (279)
T ss_dssp             SCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC
T ss_pred             CceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcc
Confidence            3899999999887  5677888999999999999999998 87  89999999999999999853221    1111  12


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecC
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNR  108 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~  108 (282)
                      ..+..+|+|+|+.+++++++.....++.....+
T Consensus       244 ~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i~~  276 (279)
T 1xg5_A          244 QMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRP  276 (279)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEE
T ss_pred             cccCCCHHHHHHHHHHHhcCCcceEeeeEEEcc
Confidence            345789999999999999988877766554433

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.45  E-value=1.5e-13  Score=117.61  Aligned_cols=104  Identities=24%  Similarity=0.217  Sum_probs=86.1

Q ss_pred             cEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh------------hh-HHH
Q 023465            8 GVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK------------VA-SKF   72 (282)
Q Consensus         8 g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~------------~~-~~~   72 (282)
                      |+||++||.++. .+.++...|++||++++.|+++++. ++.+||++|+|+||++.|++...            .. ++.
T Consensus       149 ~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  228 (274)
T 1ja9_A          149 GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI  228 (274)
T ss_dssp             EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHH
T ss_pred             CEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHH
Confidence            899999999998 7888999999999999999999998 99999999999999999998652            11 111


Q ss_pred             H------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .      .++.++.+|+|+++++++++++.+.+.+|..+..++++
T Consensus       229 ~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          229 DEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            1      13456789999999999999987766677667667763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.44  E-value=7.1e-14  Score=123.30  Aligned_cols=91  Identities=20%  Similarity=0.205  Sum_probs=71.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------H--
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------K--   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~--   71 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. ++++||+||+|+||+|+|+|......           .  
T Consensus       133 ~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  212 (327)
T 1jtv_A          133 GSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTF  212 (327)
T ss_dssp             TCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHH
T ss_pred             CCCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHH
Confidence            358999999999999999999999999999999999998 99999999999999999999643210           0  


Q ss_pred             -----HH----hhhCCC-CCHHHHHHHHHHhhcCC
Q 023465           72 -----FI----DLMGGF-VPMEMVVKGAFELITDE   96 (282)
Q Consensus        72 -----~~----~~~~~~-~~~~~~a~~~~~l~~~~   96 (282)
                           ..    .++.+. .+|+|+++.+++++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~  247 (327)
T 1jtv_A          213 HRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCC
Confidence                 00    012232 58999999999999764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.43  E-value=2.4e-13  Score=116.00  Aligned_cols=96  Identities=21%  Similarity=0.171  Sum_probs=83.2

Q ss_pred             CcEEEEEcCCCccCCCC---CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCH
Q 023465            7 PGVIINMGSSAGLYPMY---NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPM   82 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~---~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~   82 (282)
                      .|+||++||.++..+.+   +...|++||++++.|+++++. ++++||+||+|+||+++|+|...         ....+|
T Consensus       165 ~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~~~~~~  235 (267)
T 1sny_A          165 RAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------SAPLDV  235 (267)
T ss_dssp             TCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------TCSBCH
T ss_pred             CceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------CCCCCH
Confidence            48999999998877653   778899999999999999998 99999999999999999998742         245799


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++++.+++++++.....+|.++..+|+.
T Consensus       236 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          236 PTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999999988777778788777653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.42  E-value=3.5e-13  Score=118.48  Aligned_cols=92  Identities=20%  Similarity=0.229  Sum_probs=70.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--HH----------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--KF----------   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~~----------   72 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+++|+. +.++||+||+|+||+|+|++......  ..          
T Consensus       143 ~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  222 (319)
T 3ioy_A          143 KGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDK  222 (319)
T ss_dssp             CCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------
T ss_pred             CCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhH
Confidence            468999999999999999999999999999999999998 99999999999999999998753211  00          


Q ss_pred             --Hhhh----CCCCCHHHHHHHHHHhhcCCC
Q 023465           73 --IDLM----GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 --~~~~----~~~~~~~~~a~~~~~l~~~~~   97 (282)
                        ....    ....+|+++++.++.++....
T Consensus       223 ~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          223 TAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             ------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence              0000    112699999999999998765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.41  E-value=2.6e-13  Score=116.87  Aligned_cols=93  Identities=18%  Similarity=0.138  Sum_probs=75.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-----------hHHH-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-----------ASKF-   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-----------~~~~-   72 (282)
                      +.|+|||+||..+..+.++...|++||+++++|+++++. ++++||+||+|+||+++|++....           .... 
T Consensus       129 ~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  208 (281)
T 3m1a_A          129 GSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG  208 (281)
T ss_dssp             TCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH
T ss_pred             CCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH
Confidence            358999999999999999999999999999999999998 999999999999999999985321           0000 


Q ss_pred             --H-----hhhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           73 --I-----DLMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        73 --~-----~~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                        .     .+..++.+|+|+|++++++++++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~  241 (281)
T 3m1a_A          209 PTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKT  241 (281)
T ss_dssp             HHHHHHHC-----CBCHHHHHHHHHHHHHSSSC
T ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCC
Confidence              0     1335678999999999999987653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.31  E-value=9.9e-13  Score=112.81  Aligned_cols=89  Identities=29%  Similarity=0.349  Sum_probs=75.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc---CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK---RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~---~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~   81 (282)
                      +.|+||++||.++..+.++...|++||+++++|+++++. +.   ++||+||+|+||+++|+|....    ..++.+..+
T Consensus       158 ~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~  233 (272)
T 1yb1_A          158 NHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----STSLGPTLE  233 (272)
T ss_dssp             TCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----HHHHCCCCC
T ss_pred             CCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----cccccCCCC
Confidence            358999999999988888889999999999999999998 76   7799999999999999986431    123467889


Q ss_pred             HHHHHHHHHHhhcCCCC
Q 023465           82 MEMVVKGAFELITDESK   98 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~   98 (282)
                      |+|+++.+++++.+...
T Consensus       234 ~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          234 PEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            99999999999987654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.31  E-value=4e-12  Score=110.58  Aligned_cols=89  Identities=24%  Similarity=0.351  Sum_probs=71.5

Q ss_pred             CCCcEEEEEcCCCccCCC-------------------------------------------CCChhhHhhHHHHHHHHHH
Q 023465            5 KKPGVIINMGSSAGLYPM-------------------------------------------YNDPIYSASKGGVVLFTRS   41 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~~t~~   41 (282)
                      ++.|+|||+||.++..+.                                           ++...|++||+|+++|+++
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            345899999999886543                                           4568899999999999999


Q ss_pred             hcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEE
Q 023465           42 LTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLW  104 (282)
Q Consensus        42 la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~  104 (282)
                      |+. +.+  |+||+|+||+|+|+|....         ...++++.++.+++++.......++.+
T Consensus       250 la~e~~~--i~v~~v~PG~v~T~~~~~~---------~~~~~~~~a~~~~~~~~~~~~~~~g~~  302 (311)
T 3o26_A          250 LANKIPK--FQVNCVCPGLVKTEMNYGI---------GNYTAEEGAEHVVRIALFPDDGPSGFF  302 (311)
T ss_dssp             HHHHCTT--SEEEEECCCSBCSGGGTTC---------CSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred             HHhhcCC--ceEEEecCCceecCCcCCC---------CCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence            998 854  9999999999999997542         236899999999999876554334433

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.30  E-value=2.1e-12  Score=105.84  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=75.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMV   85 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~   85 (282)
                      .++||++||..+..+.++...|++||++++.|++.++. ++++||++|+|+||++.|++....    ..+..++.+++|+
T Consensus       113 ~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~dv  188 (207)
T 2yut_A          113 GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPL----GGPPKGALSPEEA  188 (207)
T ss_dssp             EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGG----TSCCTTCBCHHHH
T ss_pred             CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcccc----CCCCCCCCCHHHH
Confidence            48999999999988889999999999999999999998 999999999999999999985321    1233567899999


Q ss_pred             HHHHHHhhcCCCC
Q 023465           86 VKGAFELITDESK   98 (282)
Q Consensus        86 a~~~~~l~~~~~~   98 (282)
                      ++.++++++++..
T Consensus       189 a~~~~~~~~~~~~  201 (207)
T 2yut_A          189 ARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHC--CC
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999986543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.29  E-value=4.3e-12  Score=111.75  Aligned_cols=92  Identities=15%  Similarity=0.152  Sum_probs=67.0

Q ss_pred             CCcEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---------------
Q 023465            6 KPGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---------------   68 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---------------   68 (282)
                      +.|+|||+||.++.. ..++.+.|++||+|+++|+++++. ++++||+||+|+||+++|++....               
T Consensus       137 ~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  216 (324)
T 3u9l_A          137 KHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYE  216 (324)
T ss_dssp             TCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHH
T ss_pred             CCCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhc
Confidence            458999999999874 457789999999999999999998 999999999999999987653110               


Q ss_pred             -------hHHHHh---hh-CCCCCHHHHHHHHHHhhcCCC
Q 023465           69 -------ASKFID---LM-GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        69 -------~~~~~~---~~-~~~~~~~~~a~~~~~l~~~~~   97 (282)
                             .++...   .+ ....+|+++++++++++....
T Consensus       217 ~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~  256 (324)
T 3u9l_A          217 AGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTAS  256 (324)
T ss_dssp             HTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred             cccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence                   000000   11 123588999999999987653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.29  E-value=2.2e-12  Score=108.87  Aligned_cols=105  Identities=20%  Similarity=0.177  Sum_probs=83.7

Q ss_pred             CcEEEEEcCCCccCCC--------------------------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCc
Q 023465            7 PGVIINMGSSAGLYPM--------------------------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF   59 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~--------------------------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~   59 (282)
                      .++||++||..+..+.                          +....|++||++++.|++.++. +.++||++|+|+||+
T Consensus       106 ~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~  185 (255)
T 2dkn_A          106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGA  185 (255)
T ss_dssp             SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC
T ss_pred             CceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCc
Confidence            4899999999887654                          5667899999999999999998 888999999999999


Q ss_pred             ccCcchhhhhH-----HHHh----hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           60 VQTEMGLKVAS-----KFID----LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        60 v~T~~~~~~~~-----~~~~----~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.|++......     +...    +..++.+++|+++.+++++++.+...+|..+..+++.
T Consensus       186 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          186 VETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             BCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             ccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCe
Confidence            99998654311     1111    3346789999999999999887656666666666663

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.26  E-value=8.5e-12  Score=107.71  Aligned_cols=90  Identities=23%  Similarity=0.174  Sum_probs=74.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-c--cCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-Y--KRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~--~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      .|+|||+||.++..+.++...|++||+++++|+++++. +  ...+|+|++|+||+++|++.......  .......+|+
T Consensus       156 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~  233 (286)
T 1xu9_A          156 NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--IVHMQAAPKE  233 (286)
T ss_dssp             TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG--GGGGGCBCHH
T ss_pred             CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc--cccCCCCCHH
Confidence            48999999999999999999999999999999999997 7  68899999999999999986432111  1112357899


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      ++|+.+++.+.....
T Consensus       234 ~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          234 ECALEIIKGGALRQE  248 (286)
T ss_dssp             HHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999876543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.26  E-value=1.9e-12  Score=133.64  Aligned_cols=108  Identities=17%  Similarity=0.200  Sum_probs=79.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHH-HHHhcc-ccCCCcEEEEEeCCccc-Ccchhh--hhHHHHhhh-CCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLF-TRSLTP-YKRKGIRINVLCPEFVQ-TEMGLK--VASKFIDLM-GGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~-t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~--~~~~~~~~~-~~~   79 (282)
                      +.|+|||+||.++..+  +...|++||+|+++| ++.++. ++++ |+||+|+||+++ |+|...  ......... .+.
T Consensus       819 ~~G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~  895 (1887)
T 2uv8_A          819 PAQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT  895 (1887)
T ss_dssp             CEEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTHHHHHTTSCCC
T ss_pred             CCCEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHHHHHHhcCCCC
Confidence            3589999999999877  778999999999999 999998 8888 999999999999 888642  111111111 256


Q ss_pred             CCHHHHHHHHHHhhcCC-CCceEEEEE--ecCCccccccC
Q 023465           80 VPMEMVVKGAFELITDE-SKAGSCLWI--TNRRGMEYWPT  116 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~-~~~~~~~~~--~~~g~~~~~p~  116 (282)
                      .+|+|+++.++||+++. +.+.+|..+  ..+|++...+.
T Consensus       896 ~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~  935 (1887)
T 2uv8_A          896 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPE  935 (1887)
T ss_dssp             EEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSS
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeecccc
Confidence            69999999999999987 455555444  44688655443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.25  E-value=3.4e-12  Score=108.92  Aligned_cols=72  Identities=19%  Similarity=0.259  Sum_probs=62.0

Q ss_pred             hhhHhhHHHHHHHHHHhcc-ccC----CCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHHHHHHHhhcCC--CC
Q 023465           26 PIYSASKGGVVLFTRSLTP-YKR----KGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDE--SK   98 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~-~~~----~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~--~~   98 (282)
                      ..|++||++++.|++.++. +.+    +||+||+|+||+++|+|...         .+..+|+++++.++++++.+  ..
T Consensus       191 ~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~  261 (276)
T 1wma_A          191 SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---------KATKSPEEGAETPVYLALLPPDAE  261 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---------TCSBCHHHHTHHHHHHHSCCTTCC
T ss_pred             chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---------cccCChhHhhhhHhhhhcCccccc
Confidence            7899999999999999998 877    79999999999999998643         24679999999999999854  34


Q ss_pred             ceEEEEEe
Q 023465           99 AGSCLWIT  106 (282)
Q Consensus        99 ~~~~~~~~  106 (282)
                      +.+|.++.
T Consensus       262 ~~~G~~~~  269 (276)
T 1wma_A          262 GPHGQFVS  269 (276)
T ss_dssp             CCCSCEEE
T ss_pred             ccCceEec
Confidence            67777775

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.23  E-value=2.3e-11  Score=99.25  Aligned_cols=83  Identities=18%  Similarity=0.144  Sum_probs=71.4

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHH
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVV   86 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a   86 (282)
                      ++||++||..+..+.++...|++||++++.|+++++. + ++||++|+|+||++.|++.....   ..+..+..+++|++
T Consensus       108 ~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~---~~~~~~~~~~~dva  183 (202)
T 3d7l_A          108 GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEP---FFEGFLPVPAAKVA  183 (202)
T ss_dssp             EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGG---GSTTCCCBCHHHHH
T ss_pred             CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhh---hccccCCCCHHHHH
Confidence            8999999999998999999999999999999999998 8 88999999999999999753210   11234678999999


Q ss_pred             HHHHHhhc
Q 023465           87 KGAFELIT   94 (282)
Q Consensus        87 ~~~~~l~~   94 (282)
                      +.++++++
T Consensus       184 ~~~~~~~~  191 (202)
T 3d7l_A          184 RAFEKSVF  191 (202)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhhh
Confidence            99998884

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.17  E-value=1.7e-12  Score=130.57  Aligned_cols=107  Identities=17%  Similarity=0.194  Sum_probs=80.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHH-HHHhcc-ccCCCcEEEEEeCCccc-Ccchhhhh--HHHHhhh-CCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLF-TRSLTP-YKRKGIRINVLCPEFVQ-TEMGLKVA--SKFIDLM-GGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~-t~~la~-~~~~gI~v~~i~PG~v~-T~~~~~~~--~~~~~~~-~~~   79 (282)
                      +.|+|||+||.++..+  +...|++||+|+++| ++.++. +++. |+||+|+||+++ |+|.....  .+..... .+.
T Consensus       620 ggGrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~  696 (1688)
T 2pff_A          620 PAQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT  696 (1688)
T ss_dssp             CEEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCC
T ss_pred             CCCEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHHHhCCCCC
Confidence            3589999999999876  778999999999999 788888 8877 999999999999 78864310  1111111 145


Q ss_pred             CCHHHHHHHHHHhhcCC-CCceEEEEEec--CCcccccc
Q 023465           80 VPMEMVVKGAFELITDE-SKAGSCLWITN--RRGMEYWP  115 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~-~~~~~~~~~~~--~g~~~~~p  115 (282)
                      .+|+|+|+.++||+++. +.+.+|..+..  +|++...+
T Consensus       697 ~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            69999999999999987 45555555543  58765544

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.16  E-value=1.2e-11  Score=127.58  Aligned_cols=105  Identities=13%  Similarity=0.193  Sum_probs=78.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhc-c-ccCCCcEEEEEeCCccc-Ccchhhh--hHHHHhhhC-CCC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-P-YKRKGIRINVLCPEFVQ-TEMGLKV--ASKFIDLMG-GFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la-~-~~~~gI~v~~i~PG~v~-T~~~~~~--~~~~~~~~~-~~~   80 (282)
                      .|+|||+||.++..+  +...|++||+|+++|++.++ . +++. |+||+|+||+++ |+|....  ......... +..
T Consensus       795 ~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~  871 (1878)
T 2uv9_A          795 AQVILPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTF  871 (1878)
T ss_dssp             EEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCB
T ss_pred             CCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchhhHHHHHhcCCCCC
Confidence            589999999999876  57899999999999998764 5 7777 999999999999 9986431  111111122 567


Q ss_pred             CHHHHHHHHHHhhcCCC-CceEE--EEEecCCccccc
Q 023465           81 PMEMVVKGAFELITDES-KAGSC--LWITNRRGMEYW  114 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~-~~~~~--~~~~~~g~~~~~  114 (282)
                      +|+|+++.++||+++.+ .+.+|  +.+..||++...
T Consensus       872 sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          872 SQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             CHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             CHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            99999999999999876 44444  444446775443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.01  E-value=9.9e-10  Score=102.65  Aligned_cols=90  Identities=11%  Similarity=0.034  Sum_probs=72.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhh--HHHHhhhCCCCCHHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVA--SKFIDLMGGFVPMEM   84 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~   84 (282)
                      .++|||+||+++..+.++++.|++||+++++|++.   +..+||++|+|+||+++|+|.....  ..+........+|++
T Consensus       394 ~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA~~---~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee  470 (525)
T 3qp9_A          394 PPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALAGQ---HRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPAT  470 (525)
T ss_dssp             CCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHHTS---CCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHH
T ss_pred             CCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHHHH---HHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHH
Confidence            58999999999999999999999999999998543   6678999999999999999984321  112222224579999


Q ss_pred             HHHHHHHhhcCCCCc
Q 023465           85 VVKGAFELITDESKA   99 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~   99 (282)
                      +++.+.++++.....
T Consensus       471 ~a~~l~~~l~~~~~~  485 (525)
T 3qp9_A          471 ALTALDTALGHGDTA  485 (525)
T ss_dssp             HHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHhCCCCe
Confidence            999999999876543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.84  E-value=2.4e-09  Score=87.08  Aligned_cols=58  Identities=29%  Similarity=0.390  Sum_probs=44.3

Q ss_pred             CCeeeCCC--ChHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          223 KHILPVAR--PDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       223 ~~~~~~p~--~~~~~a~l~~~~~ta~~~l~-~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.++++|+  +++++|++++++.|||+++. .+++++|++|||+|++|++|++++|+++..
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~   62 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI   62 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc
Confidence            46789999  78899999999999999994 578899999999999999999999999864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.64  E-value=2.1e-08  Score=92.90  Aligned_cols=97  Identities=8%  Similarity=0.035  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh---hHHHHhhhCCCCCH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV---ASKFIDLMGGFVPM   82 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~---~~~~~~~~~~~~~~   82 (282)
                      ..++|||+||.++..+.+++..|++||+++++|++.+   ..+||++|+|+||++.|..+...   ...+........+|
T Consensus       366 ~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~~---~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~p  442 (496)
T 3mje_A          366 DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHR---RSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEP  442 (496)
T ss_dssp             CCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHHH---HHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECH
T ss_pred             CCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHHH---HhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCH
Confidence            4589999999999999999999999999999998864   46799999999998865543221   11111111124699


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEE
Q 023465           83 EMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ++.++.+.+++..+.......++
T Consensus       443 e~~~~~l~~~l~~~~~~~~v~~l  465 (496)
T 3mje_A          443 EHALGALDQMLENDDTAAAITLM  465 (496)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECEE
T ss_pred             HHHHHHHHHHHcCCCceEEEEEc
Confidence            99999999999877665444444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.62  E-value=1.8e-08  Score=109.07  Aligned_cols=103  Identities=11%  Similarity=0.068  Sum_probs=71.9

Q ss_pred             EEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc--ccCCCcEEEEEeCCccc-Ccchhhhh--HHH-HhhhCCCCCH
Q 023465            9 VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP--YKRKGIRINVLCPEFVQ-TEMGLKVA--SKF-IDLMGGFVPM   82 (282)
Q Consensus         9 ~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~--~~~~gI~v~~i~PG~v~-T~~~~~~~--~~~-~~~~~~~~~~   82 (282)
                      .|+++|+..+.  .++...|++||+|+++|+|+|+.  +...+|+||+|+||+|+ |++.....  .+. .....+..+|
T Consensus      2289 ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~~~~r~~~P 2366 (3089)
T 3zen_D         2289 VVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEEAGVTTYTT 2366 (3089)
T ss_dssp             EEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGGGSCBCEEH
T ss_pred             EEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHhcCCCCCCH
Confidence            34445544443  33566899999999999999984  24557999999999998 77653221  111 1122345699


Q ss_pred             HHHHHHHHHhhcCCCCce---EEEEEecCCcccc
Q 023465           83 EMVVKGAFELITDESKAG---SCLWITNRRGMEY  113 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~---~~~~~~~~g~~~~  113 (282)
                      +|+|+.++||+|+++...   +-++++.+|++..
T Consensus      2367 eEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2367 DEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             HHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             HHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            999999999999887642   3466666788754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.50  E-value=4.6e-07  Score=77.02  Aligned_cols=96  Identities=13%  Similarity=0.058  Sum_probs=70.5

Q ss_pred             CCcEEEEEcCCCcc------------CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH
Q 023465            6 KPGVIINMGSSAGL------------YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~------------~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~   72 (282)
                      +.++|||+||.++.            .+.+....|++||++++.|++.++. +   |+++++|.||.+.+++......  
T Consensus       102 ~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~--  176 (267)
T 3rft_A          102 GQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRML--  176 (267)
T ss_dssp             TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHH--
T ss_pred             CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCce--
Confidence            35799999998876            3445668999999999999998875 4   6788888888887765432111  


Q ss_pred             HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           73 IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        73 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                          ..+..++++++.+..++..+.......++..+..
T Consensus       177 ----~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          177 ----STWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             ----HHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             ----eeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence                1256899999999999987765555555554443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.49  E-value=2.8e-07  Score=85.79  Aligned_cols=90  Identities=8%  Similarity=0.054  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcc-cCcchhhhhHH-HHhhhCCCCCHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV-QTEMGLKVASK-FIDLMGGFVPME   83 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v-~T~~~~~~~~~-~~~~~~~~~~~~   83 (282)
                      +.++||++||.++..+.++...|+++|+++++|++.+   ..+||++++|+||++ +|+|....... +........+++
T Consensus       382 ~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~---~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e  458 (511)
T 2z5l_A          382 GLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERR---RAAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPD  458 (511)
T ss_dssp             TCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHH---HTTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHH
T ss_pred             CCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHH---HHcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHH
Confidence            3579999999999999999999999999999999875   467999999999999 88887543221 222223468999


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      ++++.+.+++.....
T Consensus       459 ~~a~~l~~al~~~~~  473 (511)
T 2z5l_A          459 AAVDALLGAMGRNDV  473 (511)
T ss_dssp             HHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999976554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.47  E-value=1.2e-07  Score=78.21  Aligned_cols=95  Identities=13%  Similarity=0.040  Sum_probs=68.0

Q ss_pred             CCcEEEEEcCCCccCCCCCCh----------hhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch-hhhhHH-HH
Q 023465            6 KPGVIINMGSSAGLYPMYNDP----------IYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG-LKVASK-FI   73 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~----------~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~-~~~~~~-~~   73 (282)
                      +.++||++||..+....+...          .|+++|++++.+.+.      .||+++.|+||++.++.. ...... ..
T Consensus        99 ~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~~  172 (221)
T 3r6d_A           99 NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE------SNLNYTILRLTWLYNDPEXTDYELIPEG  172 (221)
T ss_dssp             TCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH------SCSEEEEEEECEEECCTTCCCCEEECTT
T ss_pred             CCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh------CCCCEEEEechhhcCCCCCcceeeccCC
Confidence            357999999998877666544          899999999988764      689999999999988732 111100 00


Q ss_pred             hhh-CCCCCHHHHHHHHHHhh--cCCCCceEEEEEe
Q 023465           74 DLM-GGFVPMEMVVKGAFELI--TDESKAGSCLWIT  106 (282)
Q Consensus        74 ~~~-~~~~~~~~~a~~~~~l~--~~~~~~~~~~~~~  106 (282)
                      .+. ....+++|+|+.+++++  ++++.+.+..+..
T Consensus       173 ~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i  208 (221)
T 3r6d_A          173 AQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV  208 (221)
T ss_dssp             SCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred             ccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence            111 23578999999999999  8877665544433

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.42  E-value=2.2e-07  Score=90.82  Aligned_cols=86  Identities=10%  Similarity=-0.007  Sum_probs=65.1

Q ss_pred             EEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh-hHH----HHhhhCCCCCH
Q 023465            9 VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV-ASK----FIDLMGGFVPM   82 (282)
Q Consensus         9 ~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~-~~~----~~~~~~~~~~~   82 (282)
                      +|||+||.++..+.++++.|++||+    |+++|+. +.++||++|+|+||+++|.+.... .+.    +........++
T Consensus       658 ~iV~~SS~ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~  733 (795)
T 3slk_A          658 ALVLFSSVSGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPIST  733 (795)
T ss_dssp             EEEEEEETHHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCH
T ss_pred             EEEEEccHHhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCH
Confidence            7999999999999999999999996    5666665 778899999999999998865332 111    11111245788


Q ss_pred             HHHHHHHHHhhcCCCC
Q 023465           83 EMVVKGAFELITDESK   98 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~   98 (282)
                      ++..+.+..++..+..
T Consensus       734 ~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          734 EEGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            8888888887765543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.39  E-value=1.3e-06  Score=72.77  Aligned_cols=85  Identities=16%  Similarity=0.146  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCc-EEEEEeCCcccCcchhhh-hHHHHh------h---
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGI-RINVLCPEFVQTEMGLKV-ASKFID------L---   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI-~v~~i~PG~v~T~~~~~~-~~~~~~------~---   75 (282)
                      .++||++||..+..  +....|++||++++.+++.+      ++ ++|+|+||++.|++.... .+....      +   
T Consensus       124 ~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e~~~~~~------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~  195 (242)
T 2bka_A          124 CKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEEL------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSW  195 (242)
T ss_dssp             CCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTT------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTG
T ss_pred             CCEEEEEccCcCCC--CCcchHHHHHHHHHHHHHhc------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccc
Confidence            47999999987754  34568999999999998864      45 899999999999864321 111111      1   


Q ss_pred             -hCCCCCHHHHHHHHHHhhcCCCCc
Q 023465           76 -MGGFVPMEMVVKGAFELITDESKA   99 (282)
Q Consensus        76 -~~~~~~~~~~a~~~~~l~~~~~~~   99 (282)
                       ..++..++|+|++++++++++..+
T Consensus       196 ~~~~~~~~~dva~~~~~~~~~~~~~  220 (242)
T 2bka_A          196 ASGHSVPVVTVVRAMLNNVVRPRDK  220 (242)
T ss_dssp             GGGTEEEHHHHHHHHHHHHTSCCCS
T ss_pred             cCCcccCHHHHHHHHHHHHhCcccc
Confidence             234678999999999999887653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.35  E-value=2.6e-07  Score=76.85  Aligned_cols=90  Identities=16%  Similarity=0.067  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCCccCCC---CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHH--hhhCCCCC
Q 023465            7 PGVIINMGSSAGLYPM---YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFI--DLMGGFVP   81 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~---~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~--~~~~~~~~   81 (282)
                      .++||++||..+..+.   +....|+++|++++.+.+      ..||+++.|.||++.+++.........  .....+..
T Consensus       123 ~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~  196 (236)
T 3e8x_A          123 IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSIT  196 (236)
T ss_dssp             CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEE
T ss_pred             CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEe
Confidence            4799999998776554   467899999999998876      578999999999999886532211000  11245678


Q ss_pred             HHHHHHHHHHhhcCCCCceEE
Q 023465           82 MEMVVKGAFELITDESKAGSC  102 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~  102 (282)
                      ++|++++++++++++...+..
T Consensus       197 ~~Dva~~~~~~~~~~~~~g~~  217 (236)
T 3e8x_A          197 RHDVAKVIAELVDQQHTIGKT  217 (236)
T ss_dssp             HHHHHHHHHHHTTCGGGTTEE
T ss_pred             HHHHHHHHHHHhcCccccCCe
Confidence            999999999999876533333

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.29  E-value=6.5e-07  Score=82.82  Aligned_cols=90  Identities=9%  Similarity=-0.017  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCc-chhhhhHH-HHhhhCCCCCHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTE-MGLKVASK-FIDLMGGFVPME   83 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~-~~~~~~~~-~~~~~~~~~~~~   83 (282)
                      +.++||++||.++..+.++...|+++|+++++|++.+   ..+||++++|+||++.|+ |....... +........+++
T Consensus       352 ~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~---~~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e  428 (486)
T 2fr1_A          352 DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR---RSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPE  428 (486)
T ss_dssp             CCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH---HHTTCCCEEEEECCBC------------CTTTTEECBCHH
T ss_pred             CCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHH---HhcCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHH
Confidence            3589999999999999999999999999999987754   456899999999999876 54322111 111111357999


Q ss_pred             HHHHHHHHhhcCCCC
Q 023465           84 MVVKGAFELITDESK   98 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~   98 (282)
                      ++++.+.+++.....
T Consensus       429 ~~a~~l~~~l~~~~~  443 (486)
T 2fr1_A          429 TACRALQNALDRAEV  443 (486)
T ss_dssp             HHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999976554

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.09  E-value=4e-06  Score=68.78  Aligned_cols=93  Identities=15%  Similarity=0.119  Sum_probs=68.7

Q ss_pred             CcEEEEEcCCCccCCCCC-------ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCC
Q 023465            7 PGVIINMGSSAGLYPMYN-------DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGF   79 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-------~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~   79 (282)
                      .++||++||..+..+.+.       ...|+.+|++++.+.+     ...|++++.|.||++.++....... .......+
T Consensus        98 ~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~-----~~~~i~~~ilrp~~v~g~~~~~~~~-~~~~~~~~  171 (219)
T 3dqp_A           98 VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT-----KETNLDYTIIQPGALTEEEATGLID-INDEVSAS  171 (219)
T ss_dssp             CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH-----HSCCCEEEEEEECSEECSCCCSEEE-ESSSCCCC
T ss_pred             CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH-----hccCCcEEEEeCceEecCCCCCccc-cCCCcCCc
Confidence            469999999888776666       7899999999998876     3678999999999998765422111 11223457


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ..++|+++.++++++++...+....+
T Consensus       172 i~~~Dva~~i~~~l~~~~~~g~~~~i  197 (219)
T 3dqp_A          172 NTIGDVADTIKELVMTDHSIGKVISM  197 (219)
T ss_dssp             EEHHHHHHHHHHHHTCGGGTTEEEEE
T ss_pred             ccHHHHHHHHHHHHhCccccCcEEEe
Confidence            88999999999999876543433333

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.04  E-value=4e-06  Score=69.70  Aligned_cols=96  Identities=14%  Similarity=0.064  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHH---HHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-HHh-hhCCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKG---GVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-FID-LMGGF   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKa---al~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~-~~~~~   79 (282)
                      +.++||++||..+....+....+...+.   .+..+.++ .. +.+.||++|.|.||++.|+........ ... ..+++
T Consensus       116 ~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~  194 (236)
T 3qvo_A          116 DVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRA-ADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTI  194 (236)
T ss_dssp             TCCEEEEECCCCC----------------CGGGHHHHHH-HHHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSE
T ss_pred             CCCEEEEEecceecCCCCcccccchhhcccchHHHHHHH-HHHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcE
Confidence            3579999999887655443211111110   00111111 12 557899999999999988754321100 011 12456


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEE
Q 023465           80 VPMEMVVKGAFELITDESKAGSC  102 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~  102 (282)
                      .+++|+|+.+++++++++.+...
T Consensus       195 i~~~DvA~~i~~ll~~~~~~~g~  217 (236)
T 3qvo_A          195 VSRKSVAALITDIIDKPEKHIGE  217 (236)
T ss_dssp             EEHHHHHHHHHHHHHSTTTTTTE
T ss_pred             ECHHHHHHHHHHHHcCcccccCe
Confidence            79999999999999988755433

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.93  E-value=6.5e-05  Score=63.38  Aligned_cols=83  Identities=10%  Similarity=-0.021  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCCccCCCC------------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcc-cCcchhhhhHHHH
Q 023465            7 PGVIINMGSSAGLYPMY------------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV-QTEMGLKVASKFI   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v-~T~~~~~~~~~~~   73 (282)
                      .++||++||.......+            ....|+.||++++.+++.++  ...||+++.|.||++ .++....      
T Consensus       102 ~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~--~~~gi~~~~lrp~~v~~~~~~~~------  173 (267)
T 3ay3_A          102 KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYY--HKFDIETLNIRIGSCFPKPKDAR------  173 (267)
T ss_dssp             CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHH--HTTCCCEEEEEECBCSSSCCSHH------
T ss_pred             CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH--HHcCCCEEEEeceeecCCCCCCC------
Confidence            47999999987653322            34789999999999998874  356899999999997 6654221      


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCC
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                       ....+..++|+++.+++++.....
T Consensus       174 -~~~~~~~~~dva~~~~~~~~~~~~  197 (267)
T 3ay3_A          174 -MMATWLSVDDFMRLMKRAFVAPKL  197 (267)
T ss_dssp             -HHHHBCCHHHHHHHHHHHHHSSCC
T ss_pred             -eeeccccHHHHHHHHHHHHhCCCC
Confidence             112357899999999999987643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.85  E-value=2.4e-05  Score=63.02  Aligned_cols=86  Identities=7%  Similarity=0.004  Sum_probs=60.9

Q ss_pred             CcEEEEEcCCCccCCCC----CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcc-cCcchhhhhHHHHhhh-CCCC
Q 023465            7 PGVIINMGSSAGLYPMY----NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV-QTEMGLKVASKFIDLM-GGFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~----~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v-~T~~~~~~~~~~~~~~-~~~~   80 (282)
                      .++||++||.......+    ....|+.+|++++.+.+.      .+++++.|.||++ .+++............ .++.
T Consensus       103 ~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i  176 (206)
T 1hdo_A          103 VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE------SGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVI  176 (206)
T ss_dssp             CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH------TCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEE
T ss_pred             CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh------CCCCEEEEeCCcccCCCCCcceEecccCCCCCCcc
Confidence            46999999986654433    567899999999998763      6899999999998 4443221110011111 3567


Q ss_pred             CHHHHHHHHHHhhcCCCC
Q 023465           81 PMEMVVKGAFELITDESK   98 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~   98 (282)
                      .++|+++.++++++++..
T Consensus       177 ~~~Dva~~~~~~~~~~~~  194 (206)
T 1hdo_A          177 SKHDLGHFMLRCLTTDEY  194 (206)
T ss_dssp             EHHHHHHHHHHTTSCSTT
T ss_pred             CHHHHHHHHHHHhcCccc
Confidence            899999999999987653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.81  E-value=5.6e-05  Score=61.79  Aligned_cols=95  Identities=7%  Similarity=-0.036  Sum_probs=65.0

Q ss_pred             cEEEEEcCCCccCCCCC--------------ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHH--
Q 023465            8 GVIINMGSSAGLYPMYN--------------DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASK--   71 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~--------------~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~--   71 (282)
                      +++|++||..+....+.              ...|+.+|++.+.+. .+  ....+++++.|.||++.++........  
T Consensus        98 ~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-~~--~~~~~i~~~ivrp~~v~g~~~~~~~~~~~  174 (224)
T 3h2s_A           98 TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQ-FL--QMNANVNWIGISPSEAFPSGPATSYVAGK  174 (224)
T ss_dssp             CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHH-HH--TTCTTSCEEEEEECSBCCCCCCCCEEEES
T ss_pred             CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHH-HH--HhcCCCcEEEEcCccccCCCcccCceecc
Confidence            89999999877654443              678999999988542 22  346789999999999987621110000  


Q ss_pred             ----HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           72 ----FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        72 ----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                          .......+..++|+|+++++++.++...+....+
T Consensus       175 ~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~  212 (224)
T 3h2s_A          175 DTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVV  212 (224)
T ss_dssp             SBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEE
T ss_pred             cccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEE
Confidence                0011134688999999999999887655544444

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.72  E-value=4.6e-05  Score=66.43  Aligned_cols=89  Identities=13%  Similarity=0.050  Sum_probs=63.1

Q ss_pred             CcEEEEEcCCCccCCC-----C------CChhhHhhHHHHHHHHHHhccccCCCcE-EEEEeCCcccCcchhhhhHHHHh
Q 023465            7 PGVIINMGSSAGLYPM-----Y------NDPIYSASKGGVVLFTRSLTPYKRKGIR-INVLCPEFVQTEMGLKVASKFID   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-----~------~~~~Y~asKaal~~~t~~la~~~~~gI~-v~~i~PG~v~T~~~~~~~~~~~~   74 (282)
                      .++||++||.+.....     +      ....|++||++++.+++.+ .+....|| +|.+.||. .|.+..........
T Consensus       128 ~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~-~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~  205 (330)
T 2pzm_A          128 VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS-DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKA  205 (330)
T ss_dssp             CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC-SSCEEEEEECEEECTTC-CSSHHHHHHHHHHT
T ss_pred             CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc-CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHc
Confidence            4799999998765333     2      5678999999999999987 44456788 88899996 56654322211111


Q ss_pred             --h------hCCCCCHHHHHH-HHHHhhcCCC
Q 023465           75 --L------MGGFVPMEMVVK-GAFELITDES   97 (282)
Q Consensus        75 --~------~~~~~~~~~~a~-~~~~l~~~~~   97 (282)
                        .      ..++..++|+++ ++++++++..
T Consensus       206 ~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~  237 (330)
T 2pzm_A          206 GQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP  237 (330)
T ss_dssp             TCCCCEESCEECEEEHHHHHHHHHHHTSTTCC
T ss_pred             CCEEeCCCCEecceeHHHHHHHHHHHHhhcCC
Confidence              0      234578999999 9999998643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.66  E-value=0.00015  Score=63.84  Aligned_cols=88  Identities=13%  Similarity=0.033  Sum_probs=65.5

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh---hHHHHh---h----
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV---ASKFID---L----   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~---~~~~~~---~----   75 (282)
                      .++||++||..+..+   ...|++||++++.++++++. +++.|++++++.||.+.++.....   ......   +    
T Consensus       134 v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~  210 (344)
T 2gn4_A          134 ISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT  210 (344)
T ss_dssp             CSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES
T ss_pred             CCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe
Confidence            479999999766543   47899999999999999988 888999999999999987542110   011000   0    


Q ss_pred             ----hCCCCCHHHHHHHHHHhhcCCC
Q 023465           76 ----MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        76 ----~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                          ...+..++|+++++++++....
T Consensus       211 ~~~~~r~~i~v~D~a~~v~~~l~~~~  236 (344)
T 2gn4_A          211 DIRMTRFWITLDEGVSFVLKSLKRMH  236 (344)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHHCC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence                0124689999999999997653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.64  E-value=8.2e-05  Score=60.99  Aligned_cols=98  Identities=10%  Similarity=0.031  Sum_probs=68.1

Q ss_pred             CcEEEEEcCCCccCCCC----------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHH---
Q 023465            7 PGVIINMGSSAGLYPMY----------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFI---   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~----------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~---   73 (282)
                      .+++|++||..+....+          ....|+.+|++.+.+.+.++.  ..|++++.+.||++-++..........   
T Consensus       104 ~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~--~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~  181 (227)
T 3dhn_A          104 VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK--EKEIDWVFFSPAADMRPGVRTGRYRLGKDD  181 (227)
T ss_dssp             CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG--CCSSEEEEEECCSEEESCCCCCCCEEESSB
T ss_pred             CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh--ccCccEEEEeCCcccCCCccccceeecCCC
Confidence            36899999987654332          367899999999998888754  458999999999986553211000000   


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                          .....+..++|+|+++++++.++...+....+.
T Consensus       182 ~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~  218 (227)
T 3dhn_A          182 MIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIG  218 (227)
T ss_dssp             CCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEE
T ss_pred             cccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEE
Confidence                001235689999999999999887666655554

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.62  E-value=9.8e-05  Score=64.32  Aligned_cols=90  Identities=14%  Similarity=0.075  Sum_probs=64.4

Q ss_pred             cEEEEEcCCCcc-----------CCCCCChhhHhhHHHHHHHHHHhcc-cc---CCCcEEEEEeCCcccCcchhhhhHHH
Q 023465            8 GVIINMGSSAGL-----------YPMYNDPIYSASKGGVVLFTRSLTP-YK---RKGIRINVLCPEFVQTEMGLKVASKF   72 (282)
Q Consensus         8 g~Iv~isS~~~~-----------~~~~~~~~Y~asKaal~~~t~~la~-~~---~~gI~v~~i~PG~v~T~~~~~~~~~~   72 (282)
                      ++||++||.+..           .+......|+.||++++.+++.++. +.   ..++.+|.+.||..+|.+........
T Consensus       120 ~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~  199 (345)
T 2z1m_A          120 TKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSL  199 (345)
T ss_dssp             CEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHH
T ss_pred             ceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHH
Confidence            799999998542           2344567899999999999999876 54   45678899999998887643211100


Q ss_pred             ---Hh------------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           73 ---ID------------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 ---~~------------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                         ..            ....+..++|+++++++++++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          200 ARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             HHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence               00            01136789999999999997654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.61  E-value=9.3e-05  Score=61.43  Aligned_cols=93  Identities=13%  Similarity=0.049  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCCccCCCCCChh-----hHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh------hHHHHhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPI-----YSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV------ASKFIDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~-----Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~------~~~~~~~   75 (282)
                      .++||++||..+..+.+....     |..+|++++.+.+.      .||+++.|.||++.++.....      .......
T Consensus       125 ~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~  198 (253)
T 1xq6_A          125 VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQT  198 (253)
T ss_dssp             CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGS
T ss_pred             CCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh------CCCceEEEecceeecCCcchhhhhccCCcCCcCC
Confidence            479999999887654443333     55699999888763      789999999999988753210      0111111


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ..++..++|+++++++++++....+....+
T Consensus       199 ~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i  228 (253)
T 1xq6_A          199 DTKTVPRADVAEVCIQALLFEEAKNKAFDL  228 (253)
T ss_dssp             SCCEEEHHHHHHHHHHHTTCGGGTTEEEEE
T ss_pred             CCcEEcHHHHHHHHHHHHcCccccCCEEEe
Confidence            234678999999999999865433333333

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.55  E-value=0.00016  Score=62.94  Aligned_cols=71  Identities=14%  Similarity=0.055  Sum_probs=52.3

Q ss_pred             hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh-----hhHHHHh--------------hhCCCCCHHHH
Q 023465           26 PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK-----VASKFID--------------LMGGFVPMEMV   85 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~-----~~~~~~~--------------~~~~~~~~~~~   85 (282)
                      ..|+.||++.+.+++.++. +.. +++++++.|+.+.+++...     ....+..              ....+..++|+
T Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  252 (342)
T 1y1p_A          174 WVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDI  252 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHH
Confidence            5799999999999999987 755 8999999999998876421     1111100              11235689999


Q ss_pred             HHHHHHhhcCCC
Q 023465           86 VKGAFELITDES   97 (282)
Q Consensus        86 a~~~~~l~~~~~   97 (282)
                      |+++++++....
T Consensus       253 a~a~~~~~~~~~  264 (342)
T 1y1p_A          253 GLLHLGCLVLPQ  264 (342)
T ss_dssp             HHHHHHHHHCTT
T ss_pred             HHHHHHHHcCcc
Confidence            999999987643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.54  E-value=2.2e-07  Score=83.94  Aligned_cols=99  Identities=21%  Similarity=0.237  Sum_probs=77.6

Q ss_pred             cccCCceEEEEEeCCCCCCCCCCCeeEEc----------cCCccccEEeecCCCeeeCCCC-hHHHHHhhhHHHHHHHHH
Q 023465          181 DAGFEAVGLIAAVGDSVNNVKVGTPAAIM----------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIAL  249 (282)
Q Consensus       181 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------~~G~~ae~~~v~~~~~~~~p~~-~~~~a~l~~~~~ta~~~l  249 (282)
                      ..|+|.++.|.++|++++++.+|++++..          ..|++++|+..+...++.+|+. ..+.+....+..++|+++
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~~~~s~a~~av  155 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRISEGAVSIGSAAV  155 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTCSCCSHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhcCCCccHHHHHH
Confidence            36889999999999999999999997321          2488999999888888888872 222333455677888887


Q ss_pred             HHhC----CCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          250 EQAG----PASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       250 ~~~~----~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +.+.    -.+|++|+|+|+ |++|.++++.++.+
T Consensus       156 ~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~  189 (404)
T 1gpj_A          156 ELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDR  189 (404)
T ss_dssp             HHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHH
T ss_pred             HHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHC
Confidence            5433    258999999998 99999999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=97.44  E-value=0.00015  Score=63.04  Aligned_cols=87  Identities=10%  Similarity=0.025  Sum_probs=61.5

Q ss_pred             cEEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh--hhhHHH--
Q 023465            8 GVIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL--KVASKF--   72 (282)
Q Consensus         8 g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~--~~~~~~--   72 (282)
                      ++||++||.+..-           +......|+.||++++.+++.++.  ..|++++.+.|+.+.++...  .....+  
T Consensus       120 ~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~  197 (336)
T 2hun_A          120 VRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTR--TYNLNASITRCTNNYGPYQFPEKLIPKTII  197 (336)
T ss_dssp             SEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHH--HTTCEEEEEEECEEESTTCCTTSHHHHHHH
T ss_pred             cEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHH--HhCCCEEEEeeeeeeCcCCCcCchHHHHHH
Confidence            6999999975421           334567899999999999999875  12799999999999877532  111111  


Q ss_pred             --Hh-----------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           73 --ID-----------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        73 --~~-----------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                        ..           ...++..++|+++++++++++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  234 (336)
T 2hun_A          198 RASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG  234 (336)
T ss_dssp             HHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence              10           0113457999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.39  E-value=0.00016  Score=63.60  Aligned_cols=86  Identities=13%  Similarity=0.094  Sum_probs=61.6

Q ss_pred             cEEEEEcCCCcc--C-------------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcch
Q 023465            8 GVIINMGSSAGL--Y-------------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMG   65 (282)
Q Consensus         8 g~Iv~isS~~~~--~-------------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~   65 (282)
                      ++||++||.+..  .                   +......|+.||++++.+++.++. +   |++++.|.|+.+.++..
T Consensus       126 ~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          126 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             CEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             ceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence            599999996532  1                   124567899999999999999876 5   79999999999988764


Q ss_pred             hh--hhHH----HHh--h---------hCCCCCHHHHHHHHHHhhcCC
Q 023465           66 LK--VASK----FID--L---------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        66 ~~--~~~~----~~~--~---------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ..  ....    ...  .         ..++..++|+++++++++++.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  250 (361)
T 1kew_A          203 FPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG  250 (361)
T ss_dssp             CTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             CcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC
Confidence            21  1111    111  0         012457999999999999764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=97.35  E-value=0.00046  Score=59.23  Aligned_cols=86  Identities=13%  Similarity=0.101  Sum_probs=61.8

Q ss_pred             CcEEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh-----hh
Q 023465            7 PGVIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK-----VA   69 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~-----~~   69 (282)
                      .++||++||.+...           +......|+.||++.+.+++.++. +   |++++.+.|+.+-++....     ..
T Consensus       105 ~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~  181 (312)
T 3ko8_A          105 VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFI  181 (312)
T ss_dssp             CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHH
T ss_pred             CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHH
Confidence            46999999976542           233467899999999999999876 5   8999999999998775321     11


Q ss_pred             HHHHh---h---------hCCCCCHHHHHHHHHHhhcC
Q 023465           70 SKFID---L---------MGGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        70 ~~~~~---~---------~~~~~~~~~~a~~~~~l~~~   95 (282)
                      .....   .         ...+..++|++++++++++.
T Consensus       182 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          182 MKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            11111   0         11245699999999999976

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.35  E-value=0.0002  Score=61.81  Aligned_cols=88  Identities=18%  Similarity=0.120  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCCccCC-------------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh------
Q 023465            7 PGVIINMGSSAGLYP-------------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK------   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-------------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~------   67 (282)
                      .++||++||.+....             .+....|+.||++++.+++.++.  ..|++++.+.|+.+-++....      
T Consensus       118 ~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~gi~~~ilrp~~v~g~~~~~~~~~~~  195 (321)
T 2pk3_A          118 DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVK--AYGMDIIHTRTFNHIGPGQSLGFVTQD  195 (321)
T ss_dssp             CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECEEECTTCCTTSHHHH
T ss_pred             CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHH--HcCCCEEEEEeCcccCcCCCCCchHHH
Confidence            479999999865432             24567899999999999998865  138999999999987664321      


Q ss_pred             hhHHHHh-------h---------hCCCCCHHHHHHHHHHhhcCC
Q 023465           68 VASKFID-------L---------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        68 ~~~~~~~-------~---------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      .......       +         ...+..++|+++++++++++.
T Consensus       196 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  240 (321)
T 2pk3_A          196 FAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG  240 (321)
T ss_dssp             HHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC
Confidence            1111111       0         112468999999999999765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.35  E-value=0.0005  Score=55.76  Aligned_cols=95  Identities=12%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCCccCCCC------------CChhhHhhHHHHHHHHHHhcccc-CCCcEEEEEeCCcccCcchh-h-hh-
Q 023465            6 KPGVIINMGSSAGLYPMY------------NDPIYSASKGGVVLFTRSLTPYK-RKGIRINVLCPEFVQTEMGL-K-VA-   69 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~~t~~la~~~-~~gI~v~~i~PG~v~T~~~~-~-~~-   69 (282)
                      +.+++|++||..+..+.+            ....|+.+|++.+.+.. +  .. ..|++++.|.||++.++... . .. 
T Consensus        94 ~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~-~--~~~~~gi~~~ivrp~~v~g~~~~~~~~~~  170 (221)
T 3ew7_A           94 VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEH-L--KSHQAEFSWTYISPSAMFEPGERTGDYQI  170 (221)
T ss_dssp             CSSEEEEECCCC-------------------CCCSCCHHHHHHHHHH-H--HTTTTTSCEEEEECSSCCCCC--------
T ss_pred             CCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHH-H--HhhccCccEEEEeCcceecCCCccCceEe
Confidence            357999999988755433            24569999999988732 2  22 67899999999999776211 0 00 


Q ss_pred             --HHH--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEE
Q 023465           70 --SKF--IDLMGGFVPMEMVVKGAFELITDESKAGSCL  103 (282)
Q Consensus        70 --~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~  103 (282)
                        ...  ......+..++|+|++++.++.+....+...
T Consensus       171 ~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~  208 (221)
T 3ew7_A          171 GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHF  208 (221)
T ss_dssp             -------------CCCHHHHHHHHHHHHHSCSCTTSEE
T ss_pred             ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEE
Confidence              000  0011246889999999999998776544433

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.31  E-value=0.00056  Score=59.52  Aligned_cols=85  Identities=14%  Similarity=0.148  Sum_probs=61.0

Q ss_pred             cEEEEEcCCCccC---------------------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCc
Q 023465            8 GVIINMGSSAGLY---------------------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF   59 (282)
Q Consensus         8 g~Iv~isS~~~~~---------------------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~   59 (282)
                      ++||++||.+...                           +......|+.||++.+.+++.++. +   |++++.|.||+
T Consensus       118 ~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~  194 (347)
T 1orr_A          118 CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSS  194 (347)
T ss_dssp             CEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECC
T ss_pred             ceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCc
Confidence            6899999976432                           223567899999999999999876 5   79999999999


Q ss_pred             ccCcchhh-----hh----HHHH--h-----hh---C------CCCCHHHHHHHHHHhhcC
Q 023465           60 VQTEMGLK-----VA----SKFI--D-----LM---G------GFVPMEMVVKGAFELITD   95 (282)
Q Consensus        60 v~T~~~~~-----~~----~~~~--~-----~~---~------~~~~~~~~a~~~~~l~~~   95 (282)
                      +.++....     ..    ....  .     ++   +      .+..++|++++++++++.
T Consensus       195 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  255 (347)
T 1orr_A          195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN  255 (347)
T ss_dssp             EECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred             eeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence            98875311     01    1111  1     11   1      145899999999999874

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.31  E-value=8.4e-05  Score=65.97  Aligned_cols=88  Identities=10%  Similarity=-0.016  Sum_probs=67.7

Q ss_pred             CcEEEEEcCCCccCCCC--CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---HH---HHhhhC
Q 023465            7 PGVIINMGSSAGLYPMY--NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---SK---FIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~--~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~~---~~~~~~   77 (282)
                      ++++|.+|++.+....|  +...++++|++|+..+|.|+. +++  +++|.+++|.+.|.-....+   ..   .-+-++
T Consensus       226 G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk  303 (401)
T 4ggo_A          226 GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMK  303 (401)
T ss_dssp             EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHH
T ss_pred             CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccchhhcCCCchHHHHHHHHHHH
Confidence            58999999988865444  556899999999999999998 874  89999999999998765431   11   112344


Q ss_pred             CCCCHHHHHHHHHHhhcCC
Q 023465           78 GFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~   96 (282)
                      ..++.|.+.+.+..|..+.
T Consensus       304 ~~g~heg~ieq~~rl~~~~  322 (401)
T 4ggo_A          304 EKGNHEGCIEQITRLYAER  322 (401)
T ss_dssp             HHTCCCCHHHHHHHHHHHT
T ss_pred             hcCCCCchHHHHHHHHHHh
Confidence            5567888888888888653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.25  E-value=0.0015  Score=56.19  Aligned_cols=85  Identities=14%  Similarity=0.090  Sum_probs=60.8

Q ss_pred             CcEEEEEcCCCcc-----------CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh-----hhh
Q 023465            7 PGVIINMGSSAGL-----------YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL-----KVA   69 (282)
Q Consensus         7 ~g~Iv~isS~~~~-----------~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~-----~~~   69 (282)
                      .++||++||.+..           .+......|+.||++.+.+++.++. +   |++++.+.|+.+-.+...     ...
T Consensus       106 ~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~  182 (313)
T 3ehe_A          106 VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFI  182 (313)
T ss_dssp             CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHH
T ss_pred             CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHH
Confidence            4699999997654           2334567899999999999999875 4   899999999998655321     111


Q ss_pred             HHHHh------------hhCCCCCHHHHHHHHHHhhc
Q 023465           70 SKFID------------LMGGFVPMEMVVKGAFELIT   94 (282)
Q Consensus        70 ~~~~~------------~~~~~~~~~~~a~~~~~l~~   94 (282)
                      .....            ....+...+|++++++++++
T Consensus       183 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  219 (313)
T 3ehe_A          183 MKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR  219 (313)
T ss_dssp             HHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT
T ss_pred             HHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc
Confidence            11110            11235678999999999998

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.17  E-value=0.00086  Score=58.26  Aligned_cols=88  Identities=14%  Similarity=0.112  Sum_probs=63.0

Q ss_pred             CcEEEEEcCCCccCCCCC----------------ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch-h---
Q 023465            7 PGVIINMGSSAGLYPMYN----------------DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG-L---   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~----------------~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~-~---   66 (282)
                      -++||++||.......+.                ...|+.||++.+.+.+.++.  . |++++.|.||.+-++.. .   
T Consensus       118 ~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~--~-g~~~~ilrp~~v~g~~~~~~~~  194 (342)
T 2x4g_A          118 VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR--N-GLPVVIGIPGMVLGELDIGPTT  194 (342)
T ss_dssp             CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH--T-TCCEEEEEECEEECSCCSSCST
T ss_pred             CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh--c-CCcEEEEeCCceECCCCccccH
Confidence            368999999877544333                67899999999999998754  3 89999999999977654 1   


Q ss_pred             -hhhHHHHhh--------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           67 -KVASKFIDL--------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 -~~~~~~~~~--------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                       .........        ...+..++|+++++++++++..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          195 GRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             THHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence             111111110        0114589999999999997654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=97.12  E-value=0.00065  Score=59.07  Aligned_cols=89  Identities=12%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             CcEEEEEcCCCccCCC----------------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcc
Q 023465            7 PGVIINMGSSAGLYPM----------------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM   64 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~----------------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~   64 (282)
                      .++||++||.++..+.                      +....|++||++.+.+.+.++.  .+||+++.|.|+.+.++.
T Consensus       120 ~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~gi~~~~lrp~~v~Gp~  197 (337)
T 2c29_D          120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK--ENNIDFITIIPTLVVGPF  197 (337)
T ss_dssp             CCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHH--HHTCCEEEEEECEEESCC
T ss_pred             ccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHH--HcCCcEEEEeCCceECCC
Confidence            4799999998754321                      1234699999999888776543  348999999999997775


Q ss_pred             hhhh-hHHH-------------Hh--hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           65 GLKV-ASKF-------------ID--LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        65 ~~~~-~~~~-------------~~--~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .... ....             ..  ...++..++|++++++++++...
T Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  246 (337)
T 2c29_D          198 IMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPK  246 (337)
T ss_dssp             SCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCTT
T ss_pred             CCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCcc
Confidence            3211 0000             00  11236789999999999987643

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.10  E-value=0.00096  Score=57.34  Aligned_cols=86  Identities=13%  Similarity=-0.059  Sum_probs=60.1

Q ss_pred             cEEEEEcCCCccCC----------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccC---cchhhhhHHHH
Q 023465            8 GVIINMGSSAGLYP----------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQT---EMGLKVASKFI   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~----------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T---~~~~~~~~~~~   73 (282)
                      ++||++||.....+          ......|+.||++++.+++.++. +  ..||++.|. |+.++   .+.........
T Consensus       103 ~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~  179 (315)
T 2ydy_A          103 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQ  179 (315)
T ss_dssp             CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHH
T ss_pred             CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHH
Confidence            59999999876533          34467899999999999999864 4  468888888 77666   33322221111


Q ss_pred             -h---------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           74 -D---------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        74 -~---------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                       .         ....+..++|+++++++++++.
T Consensus       180 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  212 (315)
T 2ydy_A          180 FSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR  212 (315)
T ss_dssp             CCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHH
T ss_pred             hcCCCeeeccCceECcEEHHHHHHHHHHHHHhh
Confidence             1         1234578999999999998753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.10  E-value=0.00047  Score=57.94  Aligned_cols=85  Identities=12%  Similarity=0.015  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCCccCCCC----------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHh--
Q 023465            7 PGVIINMGSSAGLYPMY----------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFID--   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~----------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--   74 (282)
                      +++||++||.....+.+          ....|+.||++++.+++.   +....||++.|. |  ++++..........  
T Consensus        99 ~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~---~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~  172 (273)
T 2ggs_A           99 DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ---DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGK  172 (273)
T ss_dssp             TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC---TTCEEEEECCCB-S--SSSHHHHHHHHHHTTC
T ss_pred             CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC---CCeEEEeccccc-c--ccHHHHHHHHHHHcCC
Confidence            36999999988754332          257899999999999887   333567888777 5  45554322111111  


Q ss_pred             h------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           75 L------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        75 ~------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .      ..++..++|+++++++++++..
T Consensus       173 ~~~~~~~~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          173 TVFAFKGYYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             CEEEESCEECCCBHHHHHHHHHHHHHHTC
T ss_pred             CEEeecCCCCceEHHHHHHHHHHHHhcCc
Confidence            0      2356889999999999998653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.10  E-value=0.0011  Score=58.13  Aligned_cols=86  Identities=19%  Similarity=0.039  Sum_probs=61.3

Q ss_pred             CcEEEEEcCCCccCCCC-----------CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh------h
Q 023465            7 PGVIINMGSSAGLYPMY-----------NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK------V   68 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~-----------~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~------~   68 (282)
                      .++||++||.......+           ....|+.||++.+.+++.++. .   |++++.+.||.+-++....      .
T Consensus       145 ~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~  221 (352)
T 1sb8_A          145 VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAV  221 (352)
T ss_dssp             CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCH
T ss_pred             CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhH
Confidence            46899999987654332           357899999999999998865 4   7999999999987664321      1


Q ss_pred             hHHH----Hh--h---h------CCCCCHHHHHHHHHHhhcC
Q 023465           69 ASKF----ID--L---M------GGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        69 ~~~~----~~--~---~------~~~~~~~~~a~~~~~l~~~   95 (282)
                      ...+    ..  +   .      ..+..++|+++++++++..
T Consensus       222 ~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          222 IPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            1111    11  0   0      1356799999999998875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.05  E-value=0.00031  Score=61.13  Aligned_cols=54  Identities=15%  Similarity=-0.012  Sum_probs=41.7

Q ss_pred             CcEEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccC
Q 023465            7 PGVIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQT   62 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T   62 (282)
                      .++||++||.+..-           +......|+.||++.+.+++.++. +.  +++++.+.|+.+-.
T Consensus       121 ~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G  186 (341)
T 3enk_A          121 VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVG  186 (341)
T ss_dssp             CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEEC
T ss_pred             CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccC
Confidence            47999999976541           122346899999999999999876 53  58999999987743

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.03  E-value=0.00097  Score=57.40  Aligned_cols=89  Identities=16%  Similarity=0.091  Sum_probs=58.6

Q ss_pred             CcEEEEEcCCCccCCCC----------------------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcc
Q 023465            7 PGVIINMGSSAGLYPMY----------------------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM   64 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~----------------------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~   64 (282)
                      .++||++||.++..+.+                      ....|+.||++.+.+.+.++  ..+|++++.+.|+.+.+++
T Consensus       117 ~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~--~~~gi~~~~lrp~~v~g~~  194 (322)
T 2p4h_X          117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFG--EQNGIDVVTLILPFIVGRF  194 (322)
T ss_dssp             CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHH--HHTTCCEEEEEECEEESCC
T ss_pred             ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHH--HhcCCcEEEEcCCceECCC
Confidence            47999999987543211                      11269999997776655433  2368999999999998876


Q ss_pred             hhhh----hHHH---Hh----hhC----CCCCHHHHHHHHHHhhcCCC
Q 023465           65 GLKV----ASKF---ID----LMG----GFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        65 ~~~~----~~~~---~~----~~~----~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ....    ....   ..    ...    ++..++|+++++++++++..
T Consensus       195 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  242 (322)
T 2p4h_X          195 VCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV  242 (322)
T ss_dssp             CSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC
Confidence            4211    0000   00    011    26789999999999997643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.03  E-value=0.001  Score=58.04  Aligned_cols=86  Identities=9%  Similarity=0.126  Sum_probs=61.1

Q ss_pred             cEEEEEcCCCccC-----------------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc
Q 023465            8 GVIINMGSSAGLY-----------------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE   63 (282)
Q Consensus         8 g~Iv~isS~~~~~-----------------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~   63 (282)
                      ++||++||.+...                       +......|+.||++.+.+++.++. +   |++++.+.|+.+-++
T Consensus       118 ~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~  194 (348)
T 1oc2_A          118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGP  194 (348)
T ss_dssp             CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEEST
T ss_pred             CeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCC
Confidence            4999999975321                       233567899999999999999876 5   799999999999776


Q ss_pred             chh--hhhHH----HHh-----------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           64 MGL--KVASK----FID-----------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        64 ~~~--~~~~~----~~~-----------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ...  .....    ...           ....+..++|+++++++++++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  244 (348)
T 1oc2_A          195 YQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG  244 (348)
T ss_dssp             TCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred             CCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence            542  11111    111           0113567999999999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.94  E-value=0.0012  Score=57.83  Aligned_cols=89  Identities=17%  Similarity=0.168  Sum_probs=62.2

Q ss_pred             CcEEEEEcCCCccC------------CCCCChhhHhhHHHHHHHHHHhcc-cc------CCCcEEEEEeCCcccCcchh-
Q 023465            7 PGVIINMGSSAGLY------------PMYNDPIYSASKGGVVLFTRSLTP-YK------RKGIRINVLCPEFVQTEMGL-   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~~t~~la~-~~------~~gI~v~~i~PG~v~T~~~~-   66 (282)
                      .++||++||.+...            +......|+.||++++.+++.++. +.      +.|++++.|.||.+-++... 
T Consensus       124 ~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~  203 (357)
T 1rkx_A          124 VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA  203 (357)
T ss_dssp             CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC
T ss_pred             CCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc
Confidence            46999999976321            233567899999999999999987 64      45899999999999765321 


Q ss_pred             --hhhHHHHh--------------hhCCCCCHHHHHHHHHHhhcC
Q 023465           67 --KVASKFID--------------LMGGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        67 --~~~~~~~~--------------~~~~~~~~~~~a~~~~~l~~~   95 (282)
                        .....+..              ....+...+|++++++.++..
T Consensus       204 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  248 (357)
T 1rkx_A          204 LDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK  248 (357)
T ss_dssp             SSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHh
Confidence              11111110              011356789999999988763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.93  E-value=0.0021  Score=57.26  Aligned_cols=54  Identities=19%  Similarity=0.129  Sum_probs=42.9

Q ss_pred             cEEEEEcCCCccC------------------------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccC
Q 023465            8 GVIINMGSSAGLY------------------------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQT   62 (282)
Q Consensus         8 g~Iv~isS~~~~~------------------------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T   62 (282)
                      .+||++||.+...                        +......|+.||++++.+++.++. +   |++++.|.||.+-.
T Consensus       148 ~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~G  224 (404)
T 1i24_A          148 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYG  224 (404)
T ss_dssp             CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred             cEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeC
Confidence            4899999975431                        223457899999999999998876 5   89999999999866


Q ss_pred             cc
Q 023465           63 EM   64 (282)
Q Consensus        63 ~~   64 (282)
                      +.
T Consensus       225 p~  226 (404)
T 1i24_A          225 VK  226 (404)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=96.88  E-value=0.0013  Score=56.51  Aligned_cols=88  Identities=14%  Similarity=0.081  Sum_probs=59.0

Q ss_pred             CcEEEEEcCCCccCC-------------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh-----h
Q 023465            7 PGVIINMGSSAGLYP-------------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK-----V   68 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-------------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~-----~   68 (282)
                      .++||++||..+.++             ......|++||++++.+++.++.  ..|++++.+.|+.+-++....     .
T Consensus       109 ~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~~lrp~~v~Gp~~~~~~~~~~  186 (311)
T 2p5y_A          109 VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQ--SYGLKWVSLRYGNVYGPRQDPHGEAGV  186 (311)
T ss_dssp             CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECEEECTTCCSSSTTHH
T ss_pred             CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH--HcCCCEEEEeeccccCcCCCCCCcCcH
Confidence            469999999722111             12457899999999999998865  127999999999887664211     1


Q ss_pred             hHH----HHh--h---h-----C------CCCCHHHHHHHHHHhhcCC
Q 023465           69 ASK----FID--L---M-----G------GFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        69 ~~~----~~~--~---~-----~------~~~~~~~~a~~~~~l~~~~   96 (282)
                      ...    ...  +   .     +      .+..++|+++++++++++.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          187 VAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            111    101  0   0     1      2356899999999998764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.88  E-value=0.0013  Score=53.04  Aligned_cols=83  Identities=10%  Similarity=0.050  Sum_probs=57.9

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcE-EEEEeCCcccCcchhh-hhHHHHh---h----hC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIR-INVLCPEFVQTEMGLK-VASKFID---L----MG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~-v~~i~PG~v~T~~~~~-~~~~~~~---~----~~   77 (282)
                      .++||++||.....  +....|+.+|++++.+.+.      .|++ ++.|.||++.++.... ..+....   +    ..
T Consensus       106 ~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e~~~~~------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  177 (215)
T 2a35_A          106 ARHYLVVSALGADA--KSSIFYNRVKGELEQALQE------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKY  177 (215)
T ss_dssp             CCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHTT------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHH
T ss_pred             CCEEEEECCcccCC--CCccHHHHHHHHHHHHHHH------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCc
Confidence            46899999987653  2356899999999988764      3798 9999999998764321 1111000   0    01


Q ss_pred             CCCCHHHHHHHHHHhhcCCC
Q 023465           78 GFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .+..++|+++.+++++.++.
T Consensus       178 ~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          178 HGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHHHHHHHHHHHHHHTCCC
T ss_pred             CcEeHHHHHHHHHHHHhcCC
Confidence            23578999999999997654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.86  E-value=0.0033  Score=52.99  Aligned_cols=82  Identities=7%  Similarity=-0.094  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHh---------hhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFID---------LMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~---------~~~   77 (282)
                      -++||++||....   +....|+.+|.+.+.+.+.      .|++++.+.||++.+++..........         ...
T Consensus        96 ~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (286)
T 2zcu_A           96 VKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKI  166 (286)
T ss_dssp             CCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCB
T ss_pred             CCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCcc
Confidence            3689999998765   2335799999999988764      579999999999876643211111100         112


Q ss_pred             CCCCHHHHHHHHHHhhcCCC
Q 023465           78 GFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .+..++|++++++++++++.
T Consensus       167 ~~i~~~Dva~~~~~~~~~~~  186 (286)
T 2zcu_A          167 ASATRADYAAAAARVISEAG  186 (286)
T ss_dssp             CCBCHHHHHHHHHHHHHSSS
T ss_pred             ccccHHHHHHHHHHHhcCCC
Confidence            46789999999999998754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=96.85  E-value=0.0025  Score=55.77  Aligned_cols=87  Identities=15%  Similarity=-0.016  Sum_probs=60.7

Q ss_pred             EEEEEcCCCccCCCC-----------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh------hhhHH
Q 023465            9 VIINMGSSAGLYPMY-----------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL------KVASK   71 (282)
Q Consensus         9 ~Iv~isS~~~~~~~~-----------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~------~~~~~   71 (282)
                      +||++||.+.....+           ....|+.||++.+.+++.++.  ..|++++.|.|+.+-.+...      .....
T Consensus       157 r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~  234 (357)
T 2x6t_A          157 PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILP--EANSQIVGFRYFNVYGPREGHKGSMASVAFH  234 (357)
T ss_dssp             CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGG--GCSSCEEEEEECEEESSSCTTCGGGSCHHHH
T ss_pred             eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHH--HcCCCEEEEecCeEECCCCCCCcccchHHHH
Confidence            899999986643222           256899999999999998865  23799999999998655321      11111


Q ss_pred             H----Hh-----------h-hCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 F----ID-----------L-MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 ~----~~-----------~-~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      +    ..           . ...+..++|+|++++++++...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~  276 (357)
T 2x6t_A          235 LNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV  276 (357)
T ss_dssp             HHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence            1    00           1 2234679999999999997665

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.84  E-value=0.0029  Score=56.08  Aligned_cols=88  Identities=13%  Similarity=0.080  Sum_probs=60.8

Q ss_pred             CcEEEEEcCCCccC------------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh--
Q 023465            7 PGVIINMGSSAGLY------------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL--   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~------------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~--   66 (282)
                      .++||++||.....                  +......|+.||++.+.+++.++.  ..|++++.|.||.+-.+...  
T Consensus       137 ~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~gi~~~ilrp~~v~G~~~~~~  214 (379)
T 2c5a_A          137 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNK--DFGIECRIGRFHNIYGPFGTWK  214 (379)
T ss_dssp             CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECCEECTTSCCS
T ss_pred             CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHH--HHCCCEEEEEeCceeCcCCCcc
Confidence            36999999976532                  223457899999999999998765  23799999999998766421  


Q ss_pred             --------hhhHHHHh--h----------hCCCCCHHHHHHHHHHhhcCC
Q 023465           67 --------KVASKFID--L----------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        67 --------~~~~~~~~--~----------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                              ........  .          ...+..++|++++++++++..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          215 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             SSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             cccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence                    11111100  0          113456999999999999765

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=96.83  E-value=0.0035  Score=56.45  Aligned_cols=88  Identities=10%  Similarity=0.012  Sum_probs=61.7

Q ss_pred             CcEEEEEcCCCc-c-----------------CCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh
Q 023465            7 PGVIINMGSSAG-L-----------------YPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV   68 (282)
Q Consensus         7 ~g~Iv~isS~~~-~-----------------~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~   68 (282)
                      ..++|++||... .                 .+......|+.||++.+.+.+.++   +.|++++.+.||.+-.+.....
T Consensus       189 ~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~g~~~~ivRpg~v~G~~~~~~  265 (427)
T 4f6c_A          189 HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV---NNGLDGRIVRVGNLTSPYNGRW  265 (427)
T ss_dssp             TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHH---HTTCCEEEEEECCEESCSSSCC
T ss_pred             CCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHH---HcCCCEEEEeCCeeecCCCCCc
Confidence            468999999876 0                 012266899999999999998864   3689999999999865532210


Q ss_pred             ---------hHHHHh--------------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           69 ---------ASKFID--------------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        69 ---------~~~~~~--------------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                               ...+..              ....+...+++|+++++++....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~  317 (427)
T 4f6c_A          266 HMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT  317 (427)
T ss_dssp             CCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC
T ss_pred             cccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC
Confidence                     111110              11236778999999999998765

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.79  E-value=0.0023  Score=56.27  Aligned_cols=91  Identities=19%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             CcEEEEEcCCCccCCC----------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEE-EEEeCCcccCcchhhhhHH---
Q 023465            7 PGVIINMGSSAGLYPM----------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRI-NVLCPEFVQTEMGLKVASK---   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~----------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v-~~i~PG~v~T~~~~~~~~~---   71 (282)
                      +++||++||.+..-..          .....|+.||++.+.+++.++. +.-..||. +.+.||...+.........   
T Consensus       130 ~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~  209 (362)
T 3sxp_A          130 KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLAL  209 (362)
T ss_dssp             TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHH
T ss_pred             CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHH
Confidence            3569999995543211          2245699999999999999876 55556676 5555766544221111111   


Q ss_pred             -HHh-----------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 -FID-----------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 -~~~-----------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                       ...           ....+..++|+|++++++++.+.
T Consensus       210 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~  247 (362)
T 3sxp_A          210 GAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK  247 (362)
T ss_dssp             HHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS
T ss_pred             HHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC
Confidence             110           01124569999999999998664

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=96.74  E-value=0.0015  Score=56.61  Aligned_cols=88  Identities=17%  Similarity=0.235  Sum_probs=60.4

Q ss_pred             CcEEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh--hhhHHH-
Q 023465            7 PGVIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL--KVASKF-   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~--~~~~~~-   72 (282)
                      .++||++||.+...           +......|+.||++.+.+++.++.  ..|++++.+.|+.+-++...  .....+ 
T Consensus       119 ~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~g~~~~ilrp~~v~G~~~~~~~~~~~~~  196 (337)
T 1r6d_A          119 VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHR--TYGLDVRITRCCNNYGPYQHPEKLIPLFV  196 (337)
T ss_dssp             CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECEEECTTCCTTSHHHHHH
T ss_pred             CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHH--HHCCCEEEEEeeeeECCCCCCCChHHHHH
Confidence            36999999975431           234567899999999999998865  12799999999998766431  111111 


Q ss_pred             ---Hh--h---------hCCCCCHHHHHHHHHHhhcCC
Q 023465           73 ---ID--L---------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        73 ---~~--~---------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                         ..  .         ...+..++|+++++++++++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  234 (337)
T 1r6d_A          197 TNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (337)
T ss_dssp             HHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence               10  0         012457899999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=96.70  E-value=0.0044  Score=53.81  Aligned_cols=90  Identities=12%  Similarity=0.046  Sum_probs=60.1

Q ss_pred             CcEEEEEcCCCccCCC-C----------CChhhHhhHHHHHHHHHHhcc---ccCCCcEEEEEe--CCcccCcch---hh
Q 023465            7 PGVIINMGSSAGLYPM-Y----------NDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLC--PEFVQTEMG---LK   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-~----------~~~~Y~asKaal~~~t~~la~---~~~~gI~v~~i~--PG~v~T~~~---~~   67 (282)
                      .++||++||.+..... +          ....|++||++++.+.+.++.   +....+|++.+.  ||.+.+...   ..
T Consensus       133 ~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~  212 (342)
T 2hrz_A          133 KPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSN  212 (342)
T ss_dssp             CCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHH
T ss_pred             CcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHH
Confidence            3799999998765332 2          567899999999999998864   234568888888  998765432   11


Q ss_pred             hhHHHHh------hhC-----CCCCHHHHHHHHHHhhcCC
Q 023465           68 VASKFID------LMG-----GFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        68 ~~~~~~~------~~~-----~~~~~~~~a~~~~~l~~~~   96 (282)
                      .......      +..     .+..++|+++++++++...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~  252 (342)
T 2hrz_A          213 ILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMID  252 (342)
T ss_dssp             HHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred             HHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcc
Confidence            1111110      011     1357999999999988654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.66  E-value=0.0089  Score=52.77  Aligned_cols=88  Identities=16%  Similarity=0.071  Sum_probs=58.9

Q ss_pred             CcEEEEEcCCCccC----------------CC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcch---
Q 023465            7 PGVIINMGSSAGLY----------------PM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMG---   65 (282)
Q Consensus         7 ~g~Iv~isS~~~~~----------------~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~---   65 (282)
                      -+++|++||.+..-                +. .....|+.||++.+.+.+.++. .   |++++.+.||.+-.+..   
T Consensus       143 ~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~  219 (377)
T 2q1s_A          143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILG  219 (377)
T ss_dssp             CCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTT
T ss_pred             CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCccc
Confidence            36899999975421                22 3457899999999999998865 4   79999999999865543   


Q ss_pred             ------h------hhhHHHHh------hh---------CCCCCHHHHHHH-HHHhhcCCC
Q 023465           66 ------L------KVASKFID------LM---------GGFVPMEMVVKG-AFELITDES   97 (282)
Q Consensus        66 ------~------~~~~~~~~------~~---------~~~~~~~~~a~~-~~~l~~~~~   97 (282)
                            .      .....+..      +.         ..+..++|++++ +++++....
T Consensus       220 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~  279 (377)
T 2q1s_A          220 AGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP  279 (377)
T ss_dssp             CSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT
T ss_pred             ccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC
Confidence                  1      11111111      00         123458999999 999987654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=96.61  E-value=0.0059  Score=52.05  Aligned_cols=87  Identities=16%  Similarity=-0.014  Sum_probs=59.2

Q ss_pred             EEEEEcCCCccCCC-----------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh------hhhHH
Q 023465            9 VIINMGSSAGLYPM-----------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL------KVASK   71 (282)
Q Consensus         9 ~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~------~~~~~   71 (282)
                      ++|++||.......           .....|+.||.+.+.+.+.++.  ..|++++.+.||.+-.+...      .....
T Consensus       110 ~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~--~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~  187 (310)
T 1eq2_A          110 PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP--EANSQIVGFRYFNVYGPREGHKGSMASVAFH  187 (310)
T ss_dssp             CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG--GCSSCEEEEEECEEESSSCGGGGGGSCHHHH
T ss_pred             eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH--HcCCCEEEEeCCcEECcCCCCCCccchHHHH
Confidence            89999997653221           1256899999999999998764  24899999999998655321      11111


Q ss_pred             H----H---------h--h-hCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 F----I---------D--L-MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 ~----~---------~--~-~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      +    .         .  . ...+...+|+++++++++....
T Consensus       188 ~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~  229 (310)
T 1eq2_A          188 LNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV  229 (310)
T ss_dssp             HHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence            0    0         0  1 1234568999999999997655

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.57  E-value=0.0036  Score=53.08  Aligned_cols=86  Identities=13%  Similarity=0.072  Sum_probs=53.6

Q ss_pred             cEEEEEcCCCccCCCC-----------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHh--
Q 023465            8 GVIINMGSSAGLYPMY-----------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFID--   74 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~-----------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--   74 (282)
                      .+||++||.+......           ....|+.||++.+.+.+.++. .-..+|.+.|. |+ .+.+..........  
T Consensus       106 ~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~lR~~~v~-G~-~~~~~~~~~~~~~~~~  182 (292)
T 1vl0_A          106 AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-KYYIVRTAWLY-GD-GNNFVKTMINLGKTHD  182 (292)
T ss_dssp             CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-SEEEEEECSEE-SS-SSCHHHHHHHHHHHCS
T ss_pred             CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-CeEEEeeeeee-CC-CcChHHHHHHHHhcCC
Confidence            4999999976543221           356899999999999998753 11234444444 33 34443222111111  


Q ss_pred             -------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           75 -------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        75 -------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                             ....+..++|++++++++++++
T Consensus       183 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          183 ELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             EEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             cEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence                   1124567999999999999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.55  E-value=0.0057  Score=53.16  Aligned_cols=53  Identities=13%  Similarity=0.004  Sum_probs=41.3

Q ss_pred             CcEEEEEcCCCccC-------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCccc
Q 023465            7 PGVIINMGSSAGLY-------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQ   61 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~   61 (282)
                      .++||++||....-             +......|+.||.+.+.+.+.++.  ..|++++.+.|+.+-
T Consensus       118 ~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          118 VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQR--SGAMETVILRFSHTQ  183 (347)
T ss_dssp             CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH--HSSSEEEEEEECEEE
T ss_pred             CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH--hcCCceEEEccceEe
Confidence            46999999965432             234567899999999999988754  248999999999886

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.50  E-value=0.0038  Score=54.14  Aligned_cols=88  Identities=14%  Similarity=0.077  Sum_probs=58.6

Q ss_pred             cEEEEEcCCCccCCCC------------------CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh---
Q 023465            8 GVIINMGSSAGLYPMY------------------NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL---   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~------------------~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~---   66 (282)
                      +++|++||........                  ....|+.||++.+.+.+.++.  ..|++++.+.|+.+-.+...   
T Consensus       110 ~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~ilrp~~v~G~~~~~~~  187 (345)
T 2bll_A          110 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGE--KEGLQFTLFRPFNWMGPRLDNLN  187 (345)
T ss_dssp             CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECSEECSSCCCTT
T ss_pred             CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHH--hcCCCEEEEcCCcccCCCccccc
Confidence            7999999976532111                  123799999999999998765  12799999999998544321   


Q ss_pred             -----------hhhHHHHh--h---------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           67 -----------KVASKFID--L---------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 -----------~~~~~~~~--~---------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                 ........  +         ...+..++|+++++++++....
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  240 (345)
T 2bll_A          188 AARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG  240 (345)
T ss_dssp             CSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred             ccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcc
Confidence                       11111110  0         1135689999999999997653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.46  E-value=0.012  Score=49.65  Aligned_cols=82  Identities=11%  Similarity=-0.071  Sum_probs=57.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHH-HHh---------hh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASK-FID---------LM   76 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~-~~~---------~~   76 (282)
                      -++||++||.... .  ....|+.+|.+.+.+.+.      .|++++.+.||++.+++....... ...         ..
T Consensus        99 ~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E~~~~~------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (287)
T 2jl1_A           99 VKHIAYTGYAFAE-E--SIIPLAHVHLATEYAIRT------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGI  169 (287)
T ss_dssp             CSEEEEEEETTGG-G--CCSTHHHHHHHHHHHHHH------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCC
T ss_pred             CCEEEEECCCCCC-C--CCCchHHHHHHHHHHHHH------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCc
Confidence            3699999998764 2  234799999999988764      689999999999866541111111 100         11


Q ss_pred             CCCCCHHHHHHHHHHhhcCCC
Q 023465           77 GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ..+..++|++++++++++++.
T Consensus       170 ~~~i~~~Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          170 VNSVTRNELALAAATVLTEEG  190 (287)
T ss_dssp             BCCBCHHHHHHHHHHHHTSSS
T ss_pred             cCccCHHHHHHHHHHHhcCCC
Confidence            246789999999999997654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.17  E-value=0.0048  Score=54.75  Aligned_cols=52  Identities=23%  Similarity=0.012  Sum_probs=41.3

Q ss_pred             CcEEEEEcCCCccCCCC------------------CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCccc
Q 023465            7 PGVIINMGSSAGLYPMY------------------NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ   61 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~------------------~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~   61 (282)
                      .++||++||.+..-...                  ....|++||++++.+++.++. +   |++++.+.|+.+-
T Consensus       136 ~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~  206 (397)
T 1gy8_A          136 CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNAC  206 (397)
T ss_dssp             CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred             CCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEecccee
Confidence            46999999965432111                  257899999999999999876 6   8999999999874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.16  E-value=0.0086  Score=52.00  Aligned_cols=89  Identities=7%  Similarity=0.017  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCCccCCC------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh--hhhHHH
Q 023465            7 PGVIINMGSSAGLYPM------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL--KVASKF   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~--~~~~~~   72 (282)
                      .+++|++||.......            .....|+.||.+.+.+.+.++.  ..|++++.+.|+.+-.+...  .....+
T Consensus       141 ~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~g~~~~ilRp~~v~G~~~~~~~~~~~~  218 (346)
T 4egb_A          141 HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYK--TYQLPVIVTRCSNNYGPYQYPEKLIPLM  218 (346)
T ss_dssp             TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECEEESTTCCTTSHHHHH
T ss_pred             CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHH--HhCCCEEEEeecceeCcCCCccchHHHH
Confidence            4689999997554322            1247899999999999998765  13799999999988655321  111111


Q ss_pred             ----Hh--h---------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           73 ----ID--L---------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 ----~~--~---------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                          ..  +         ...+..++|+++++++++....
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (346)
T 4egb_A          219 VTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR  258 (346)
T ss_dssp             HHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence                11  0         0123458999999999998765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.12  E-value=0.011  Score=51.23  Aligned_cols=53  Identities=15%  Similarity=-0.141  Sum_probs=40.3

Q ss_pred             CcEEEEEcCCCccCC------------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcc
Q 023465            7 PGVIINMGSSAGLYP------------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV   60 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v   60 (282)
                      .++||++||.+....            .|....|+.||++++.+++.++.- ..++++..+.|+.+
T Consensus       124 ~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v  188 (348)
T 1ek6_A          124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNP  188 (348)
T ss_dssp             CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEE
T ss_pred             CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccc
Confidence            479999999765421            133678999999999999987643 34589999988765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=96.11  E-value=0.0096  Score=51.71  Aligned_cols=87  Identities=11%  Similarity=0.075  Sum_probs=58.5

Q ss_pred             cEEEEEcCCCccC----------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh-----
Q 023465            8 GVIINMGSSAGLY----------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL-----   66 (282)
Q Consensus         8 g~Iv~isS~~~~~----------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~-----   66 (282)
                      .++|++||.....                +......|+.||++.+.+.+.++.  ..|++++.+.|+.+-.+...     
T Consensus       134 ~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilrp~~v~G~~~~~~~~~  211 (343)
T 2b69_A          134 ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK--QEGVEVRVARIFNTFGPRMHMNDGR  211 (343)
T ss_dssp             CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECCEECTTCCTTCCC
T ss_pred             CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHH--HhCCcEEEEEEcceeCcCCCCCccc
Confidence            4899999976431                223456799999999999988765  23799999999988655321     


Q ss_pred             ---hhhHHHHh--h---------hCCCCCHHHHHHHHHHhhcCC
Q 023465           67 ---KVASKFID--L---------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        67 ---~~~~~~~~--~---------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                         ........  .         ...+..++|+++++++++...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          212 VVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             HHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence               11111111  0         012457999999999998754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=96.07  E-value=0.022  Score=48.99  Aligned_cols=55  Identities=11%  Similarity=0.014  Sum_probs=41.9

Q ss_pred             CcEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCc
Q 023465            7 PGVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTE   63 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~   63 (282)
                      .+++|++||.+....           ......|+.||++.+.+.+.++.  ..|++++.+.|+.+-.+
T Consensus       110 ~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~ilrp~~v~G~  175 (330)
T 2c20_A          110 VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQ--ASNLRYKIFRYFNVAGA  175 (330)
T ss_dssp             CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHH--TSSCEEEEEECSEEECC
T ss_pred             CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHH--HhCCcEEEEecCcccCC
Confidence            368999999765421           12357899999999999998765  23899999999877543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.00  E-value=0.027  Score=47.39  Aligned_cols=84  Identities=14%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             cEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHh--
Q 023465            8 GVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFID--   74 (282)
Q Consensus         8 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~--   74 (282)
                      .++|++||......           ......|+.||.+.+.+.+.++.      +.+.+.|+.+-.+........+..  
T Consensus        99 ~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~------~~~ilR~~~v~G~~~~~~~~~~~~~~  172 (287)
T 3sc6_A           99 AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN------KYFIVRTSWLYGKYGNNFVKTMIRLG  172 (287)
T ss_dssp             CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS------SEEEEEECSEECSSSCCHHHHHHHHH
T ss_pred             CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC------CcEEEeeeeecCCCCCcHHHHHHHHH
Confidence            48999999765422           12356899999999999998754      346777877644322111111111  


Q ss_pred             -----------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           75 -----------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        75 -----------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                 ....+..++|+++++++++....
T Consensus       173 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  206 (287)
T 3sc6_A          173 KEREEISVVADQIGSPTYVADLNVMINKLIHTSL  206 (287)
T ss_dssp             TTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC
T ss_pred             HcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC
Confidence                       11234569999999999998765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=95.96  E-value=0.0087  Score=57.17  Aligned_cols=87  Identities=14%  Similarity=0.052  Sum_probs=59.3

Q ss_pred             cEEEEEcCCCccCCC------------------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh--
Q 023465            8 GVIINMGSSAGLYPM------------------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL--   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~~------------------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~--   66 (282)
                      +++|++||.......                  .....|+.||++.+.+.+.++. .   |++++.+.||.+-.+...  
T Consensus       425 ~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~  501 (660)
T 1z7e_A          425 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNL  501 (660)
T ss_dssp             CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCH
T ss_pred             CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCcccc
Confidence            799999997654211                  1234799999999999998765 4   799999999998655321  


Q ss_pred             ------------hhhHHHHh--h---------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           67 ------------KVASKFID--L---------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 ------------~~~~~~~~--~---------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                  ........  +         ...+..++|++++++++++...
T Consensus       502 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  555 (660)
T 1z7e_A          502 NAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG  555 (660)
T ss_dssp             HHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred             ccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcc
Confidence                        01111111  0         0124569999999999997654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.94  E-value=0.016  Score=50.38  Aligned_cols=86  Identities=13%  Similarity=-0.003  Sum_probs=58.5

Q ss_pred             CcEEEEEcCCCccCCCC-----------CChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh--------
Q 023465            7 PGVIINMGSSAGLYPMY-----------NDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL--------   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~-----------~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~--------   66 (282)
                      -+++|++||.+.....+           ....|+.||.+.+.+.+.++. .   |++++.+.|+.+-.+...        
T Consensus       143 ~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~  219 (351)
T 3ruf_A          143 VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAV  219 (351)
T ss_dssp             CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCH
T ss_pred             CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhH
Confidence            36899999986643222           246899999999999988765 4   789999999987543211        


Q ss_pred             --hhhHHHHh-----------hhCCCCCHHHHHHHHHHhhcC
Q 023465           67 --KVASKFID-----------LMGGFVPMEMVVKGAFELITD   95 (282)
Q Consensus        67 --~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~~   95 (282)
                        ........           ....+...+|++++++.++..
T Consensus       220 ~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          220 IPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             HHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence              11111111           011346799999999998876

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.90  E-value=0.021  Score=49.44  Aligned_cols=88  Identities=13%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             CcEEEEEcCCCccC----C---------CCCChhhHhhHHHHHHHHHH-hccccCCCcEE-EEEeCCcccCcchhhhhHH
Q 023465            7 PGVIINMGSSAGLY----P---------MYNDPIYSASKGGVVLFTRS-LTPYKRKGIRI-NVLCPEFVQTEMGLKVASK   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~----~---------~~~~~~Y~asKaal~~~t~~-la~~~~~gI~v-~~i~PG~v~T~~~~~~~~~   71 (282)
                      .++||++||.+...    .         .|....|+.||++++.+++. ++.  -..+|. +.+.|+.. +.+.......
T Consensus       129 ~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~~--~~ilR~~~v~gp~~~-~~~~~~~~~~  205 (333)
T 2q1w_A          129 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLD--FVTFRLANVVGPRNV-SGPLPIFFQR  205 (333)
T ss_dssp             CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTCC--EEEEEESEEESTTCC-SSHHHHHHHH
T ss_pred             CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhCC--eEEEeeceEECcCCc-CcHHHHHHHH
Confidence            47999999976543    1         22227899999999999998 751  112343 33444410 1111111111


Q ss_pred             HH--------hhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           72 FI--------DLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        72 ~~--------~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ..        .....+..++|+++++++++++..
T Consensus       206 ~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~  239 (333)
T 2q1w_A          206 LSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG  239 (333)
T ss_dssp             HHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC
T ss_pred             HHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence            10        112345789999999999998655

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.85  E-value=0.018  Score=50.80  Aligned_cols=91  Identities=18%  Similarity=0.139  Sum_probs=57.2

Q ss_pred             CcEEEEEcCCCccC----------CCCCChhhHhhHHHHHHHHHHhcc-ccC---CCcEEEEEeCCcccCcch---hhhh
Q 023465            7 PGVIINMGSSAGLY----------PMYNDPIYSASKGGVVLFTRSLTP-YKR---KGIRINVLCPEFVQTEMG---LKVA   69 (282)
Q Consensus         7 ~g~Iv~isS~~~~~----------~~~~~~~Y~asKaal~~~t~~la~-~~~---~gI~v~~i~PG~v~T~~~---~~~~   69 (282)
                      .++||++||.+...          +......|+.||++.+.+++.++. +.-   ..+..|.+.||...+.+.   ....
T Consensus       154 ~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~  233 (381)
T 1n7h_A          154 TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAL  233 (381)
T ss_dssp             CCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHH
T ss_pred             ccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHH
Confidence            46999999976532          234567899999999999998865 431   123445667775543221   1111


Q ss_pred             HHHHh------------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           70 SKFID------------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        70 ~~~~~------------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .....            ....+..++|++++++++++...
T Consensus       234 ~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  273 (381)
T 1n7h_A          234 GRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK  273 (381)
T ss_dssp             HHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            11100            11235679999999999997654

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=95.84  E-value=0.003  Score=52.18  Aligned_cols=34  Identities=15%  Similarity=0.089  Sum_probs=27.4

Q ss_pred             HHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHH
Q 023465          244 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQ  279 (282)
Q Consensus       244 ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~  279 (282)
                      .+.+.+...++++|++||..|+ | .|..++++++.
T Consensus        79 ~~~~~~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~  112 (248)
T 2yvl_A           79 DSFYIALKLNLNKEKRVLEFGT-G-SGALLAVLSEV  112 (248)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECC-T-TSHHHHHHHHH
T ss_pred             hHHHHHHhcCCCCCCEEEEeCC-C-ccHHHHHHHHh
Confidence            3346667888899999999998 6 68888888875

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.83  E-value=0.00071  Score=62.28  Aligned_cols=91  Identities=13%  Similarity=0.032  Sum_probs=58.5

Q ss_pred             CCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccccEEeecCCCeeeCCCChHHHHHhhhHHHHHHHHHHHhC--CC
Q 023465          178 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAG--PA  255 (282)
Q Consensus       178 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~ae~~~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l~~~~--~~  255 (282)
                      +|.++ +++.|+|+++|.+|+++..     ....|.+...+....+.+.+-  .+   -.+.....++++++++..  ..
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~a-----~~~~Gilv~~~~~vn~sVae~--~~---r~l~~~~~s~~~g~~r~~~~~l  272 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLYQ-----FAAAGDLAFPAINVNDSVTKS--KF---DNKYGTRHSLIDGINRGTDALI  272 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHHH-----HHHTTCCCSCEEECTTSHHHH--TT---HHHHHHHHHHHHHHHHHHCCCC
T ss_pred             chhhh-cCeEEEEEEeCCChhHHHH-----HHHcCCEEEecCCccHHHHHH--HH---hhhhhhhhhhhHHHHhccCCCC
Confidence            55566 8999999999998877610     011244433332221222110  11   123445667788885544  58


Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+|.|+ |.+|+.++|.++.+
T Consensus       273 ~GktV~IiG~-G~IG~~~A~~lka~  296 (494)
T 3ce6_A          273 GGKKVLICGY-GDVGKGCAEAMKGQ  296 (494)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHC
Confidence            9999999998 99999999999975

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.81  E-value=0.027  Score=48.02  Aligned_cols=89  Identities=11%  Similarity=0.038  Sum_probs=60.5

Q ss_pred             cEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCc-EEEEEeCCcccCcchh------hhh
Q 023465            8 GVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGI-RINVLCPEFVQTEMGL------KVA   69 (282)
Q Consensus         8 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI-~v~~i~PG~v~T~~~~------~~~   69 (282)
                      .++|++||......           ......|+.||.+.+.+.+.++.  ..++ +++.+.|+.+-.+...      ...
T Consensus       112 ~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~  189 (321)
T 3vps_A          112 PKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQR--ASVAPEVGIVRFFNVYGPGERPDALVPRLC  189 (321)
T ss_dssp             CEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH--SSSSCEEEEEEECEEECTTCCTTSHHHHHH
T ss_pred             CeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH--HcCCCceEEEEeccccCcCCCCCChHHHHH
Confidence            68999999765322           12357899999999999888754  3478 9999999988544321      111


Q ss_pred             HHHHh--h---------hCCCCCHHHHHHHHHHhhcCCCC
Q 023465           70 SKFID--L---------MGGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        70 ~~~~~--~---------~~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                      .....  .         ...+..++|++++++++++....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~  229 (321)
T 3vps_A          190 ANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP  229 (321)
T ss_dssp             HHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC
T ss_pred             HHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC
Confidence            11111  0         01245899999999999987654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.75  E-value=0.00098  Score=57.91  Aligned_cols=69  Identities=17%  Similarity=0.118  Sum_probs=47.1

Q ss_pred             hhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh----hH----------H-HH--h----hhC--CCCCHH
Q 023465           27 IYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV----AS----------K-FI--D----LMG--GFVPME   83 (282)
Q Consensus        27 ~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~----~~----------~-~~--~----~~~--~~~~~~   83 (282)
                      .|+.||++.+.+.+.++.  .+|+++++|.|+.+.++.....    ..          . +.  .    ..+  .+..++
T Consensus       167 ~Y~~sK~~~E~~~~~~~~--~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~  244 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAE--ENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVE  244 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHH--HHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHH--HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHH
Confidence            599999988887776543  2489999999999987753210    00          0 00  0    001  367899


Q ss_pred             HHHHHHHHhhcCCC
Q 023465           84 MVVKGAFELITDES   97 (282)
Q Consensus        84 ~~a~~~~~l~~~~~   97 (282)
                      |++++++++++...
T Consensus       245 Dva~a~~~~~~~~~  258 (338)
T 2rh8_A          245 DVCRAHIFVAEKES  258 (338)
T ss_dssp             HHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999997543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.58  E-value=0.027  Score=48.09  Aligned_cols=89  Identities=15%  Similarity=0.103  Sum_probs=59.7

Q ss_pred             CcEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh--hhhHHHH
Q 023465            7 PGVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL--KVASKFI   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~--~~~~~~~   73 (282)
                      -.++|++||......           ......|+.||.+.+.+.+.++.  ..|++++.+.|+.+-.+...  .....+.
T Consensus       101 ~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~g~~~~ilRp~~v~G~~~~~~~~~~~~~  178 (311)
T 3m2p_A          101 ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSR--KKGLCIKNLRFAHLYGFNEKNNYMINRFF  178 (311)
T ss_dssp             CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHH--HSCCEEEEEEECEEECSCC--CCHHHHHH
T ss_pred             CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH--HcCCCEEEEeeCceeCcCCCCCCHHHHHH
Confidence            358999999655321           12346899999999999888754  35899999999988654322  1111111


Q ss_pred             h------h---------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           74 D------L---------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        74 ~------~---------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      .      .         ...+...+|+++++++++....
T Consensus       179 ~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          179 RQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             HHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred             HHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence            1      0         0124578999999999998765

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.46  E-value=0.0056  Score=66.77  Aligned_cols=36  Identities=6%  Similarity=-0.053  Sum_probs=33.8

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhc
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT   43 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la   43 (282)
                      |+|||+||.++..+.+++..|++||+++++|+|.++
T Consensus      2014 g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr 2049 (2512)
T 2vz8_A         2014 DYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRR 2049 (2512)
T ss_dssp             CEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999643

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.45  E-value=0.03  Score=47.39  Aligned_cols=83  Identities=11%  Similarity=0.068  Sum_probs=55.3

Q ss_pred             cEEEEEcCCCccCCC-----------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHH----
Q 023465            8 GVIINMGSSAGLYPM-----------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKF----   72 (282)
Q Consensus         8 g~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~----   72 (282)
                      .++|++||.......           .....|+.||++.+.+.+.++.      +++.+.|+.+-.+........+    
T Consensus        97 ~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~------~~~ilRp~~v~G~~~~~~~~~~~~~~  170 (299)
T 1n2s_A           97 AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP------KHLIFRTSWVYAGKGNNFAKTMLRLA  170 (299)
T ss_dssp             CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS------SEEEEEECSEECSSSCCHHHHHHHHH
T ss_pred             CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC------CeEEEeeeeecCCCcCcHHHHHHHHH
Confidence            489999997654221           1256899999999999988642      7888999988655322111111    


Q ss_pred             Hh--h-------hCCCCCHHHHHHHHHHhhcCC
Q 023465           73 ID--L-------MGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        73 ~~--~-------~~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ..  .       ...+..++|+++++++++...
T Consensus       171 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  203 (299)
T 1n2s_A          171 KERQTLSVINDQYGAPTGAELLADCTAHAIRVA  203 (299)
T ss_dssp             HHCSEEEEECSCEECCEEHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEeecCcccCCeeHHHHHHHHHHHHHHh
Confidence            11  0       012345999999999998764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=95.34  E-value=0.04  Score=46.69  Aligned_cols=89  Identities=12%  Similarity=0.045  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCCccC----------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh----
Q 023465            7 PGVIINMGSSAGLY----------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL----   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~----------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~----   66 (282)
                      -.++|++||.+...                ..|....|+.||.+.+.+.+.++.  ..|++++.+.|+.+-.+...    
T Consensus       105 ~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilRp~~v~Gp~~~~~~~  182 (319)
T 4b8w_A          105 ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQ--QYGCTFTAVIPTNVFGPHDNFNIE  182 (319)
T ss_dssp             CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECEEECTTCCCCTT
T ss_pred             CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHH--hhCCCEEEEeeccccCCCCCCCCc
Confidence            35899999986532                112233699999999999888765  23789999999987433211    


Q ss_pred             ------hhhHH----HHh--hh---------CCCCCHHHHHHHHHHhhcCCC
Q 023465           67 ------KVASK----FID--LM---------GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 ------~~~~~----~~~--~~---------~~~~~~~~~a~~~~~l~~~~~   97 (282)
                            .....    ...  .+         ..+...+|++++++.++....
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  234 (319)
T 4b8w_A          183 DGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN  234 (319)
T ss_dssp             TSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             cccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc
Confidence                  11111    111  00         123679999999999997644

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.23  E-value=0.031  Score=48.96  Aligned_cols=87  Identities=10%  Similarity=0.020  Sum_probs=57.6

Q ss_pred             cEEEEEcCCCccCCC------------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch----
Q 023465            8 GVIINMGSSAGLYPM------------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG----   65 (282)
Q Consensus         8 g~Iv~isS~~~~~~~------------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~----   65 (282)
                      .++|++||....-..                  .....|+.||.+.+.+.+.++.  . |++++.+.|+.+-.+..    
T Consensus       134 ~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~--~-g~~~~ilRp~~v~G~~~~~~~  210 (372)
T 3slg_A          134 KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM--E-GLNFTLFRPFNWIGPGLDSIY  210 (372)
T ss_dssp             CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT--T-TCEEEEEEECSEECSSCCCTT
T ss_pred             CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH--C-CCCEEEEccccccCCCccccc
Confidence            699999996543211                  2334799999999999887642  2 89999999998743321    


Q ss_pred             ----------hhhhHHHHh-----------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           66 ----------LKVASKFID-----------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        66 ----------~~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                .........           ....+...+|+++++++++....
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  263 (372)
T 3slg_A          211 TPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN  263 (372)
T ss_dssp             CSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred             ccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc
Confidence                      111111111           01135679999999999998754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=94.89  E-value=0.019  Score=48.90  Aligned_cols=89  Identities=12%  Similarity=0.039  Sum_probs=58.1

Q ss_pred             CcEEEEEcCCCccCCC------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcch-------hh
Q 023465            7 PGVIINMGSSAGLYPM------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMG-------LK   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~-------~~   67 (282)
                      -+++|++||.......            .....|+.||++.+.+.+.++.  ..|++++.+.|+.+-.+..       ..
T Consensus       110 ~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~--~~~~~~~~lrp~~v~g~~~~~~~~~~~~  187 (312)
T 2yy7_A          110 IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHN--IYGVDVRSIRYPGLISWSTPPGGGTTDY  187 (312)
T ss_dssp             CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHH--HHCCEEECEEECEEECSSSCCCSCTTTH
T ss_pred             CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHH--hcCCcEEEEeCCeEecCCCCCCCchhhh
Confidence            3689999997654321            2356899999999999988765  2279999999987754210       00


Q ss_pred             hhHHH----Hh-h---h------CCCCCHHHHHHHHHHhhcCCC
Q 023465           68 VASKF----ID-L---M------GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        68 ~~~~~----~~-~---~------~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ....+    .. .   .      ..+...+|++++++.++....
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  231 (312)
T 2yy7_A          188 AVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV  231 (312)
T ss_dssp             HHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence            11111    00 0   0      113567999999999987654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.74  E-value=0.025  Score=47.64  Aligned_cols=82  Identities=6%  Similarity=-0.151  Sum_probs=54.1

Q ss_pred             CcEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHh-
Q 023465            7 PGVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFID-   74 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-   74 (282)
                      .+++|++||......           ......|+.||.+.+.+ +..       ++++.+.|+.+-.+........... 
T Consensus       101 ~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~~  172 (286)
T 3gpi_A          101 LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-------YSSTILRFSGIYGPGRLRMIRQAQTP  172 (286)
T ss_dssp             CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-------SSEEEEEECEEEBTTBCHHHHHTTCG
T ss_pred             CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-------CCeEEEecccccCCCchhHHHHHHhc
Confidence            469999999765321           12357899999999888 542       7888899988754432211111110 


Q ss_pred             -------hhCCCCCHHHHHHHHHHhhcCC
Q 023465           75 -------LMGGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        75 -------~~~~~~~~~~~a~~~~~l~~~~   96 (282)
                             ....+...+|+++++++++...
T Consensus       173 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  201 (286)
T 3gpi_A          173 EQWPARNAWTNRIHRDDGAAFIAYLIQQR  201 (286)
T ss_dssp             GGSCSSBCEECEEEHHHHHHHHHHHHHHH
T ss_pred             ccCCCcCceeEEEEHHHHHHHHHHHHhhh
Confidence                   1123467899999999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=94.52  E-value=0.05  Score=45.66  Aligned_cols=86  Identities=3%  Similarity=-0.176  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh---hHHH
Q 023465            7 PGVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV---ASKF   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~---~~~~   72 (282)
                      -.++|++||....-.           ......|+.+|.+.+.+.+.+     .+++++.+.|+.+-.+.....   ....
T Consensus        95 ~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~  169 (286)
T 3ius_A           95 FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV-----PNLPLHVFRLAGIYGPGRGPFSKLGKGG  169 (286)
T ss_dssp             CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS-----TTCCEEEEEECEEEBTTBSSSTTSSSSC
T ss_pred             ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh-----cCCCEEEEeccceECCCchHHHHHhcCC
Confidence            368999999754321           123457999999999888875     689999999998854432110   0000


Q ss_pred             ------HhhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           73 ------IDLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        73 ------~~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                            ......+...+|+++++++++....
T Consensus       170 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  200 (286)
T 3ius_A          170 IRRIIKPGQVFSRIHVEDIAQVLAASMARPD  200 (286)
T ss_dssp             CCEEECTTCCBCEEEHHHHHHHHHHHHHSCC
T ss_pred             ccccCCCCcccceEEHHHHHHHHHHHHhCCC
Confidence                  0011234678999999999998766

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=94.35  E-value=0.044  Score=46.82  Aligned_cols=89  Identities=12%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             CcEEEEEcCCCccCC----------------CCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh----
Q 023465            7 PGVIINMGSSAGLYP----------------MYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL----   66 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~----------------~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~----   66 (282)
                      -+++|++||......                .|....|+.||.+.+.+.+.++.  ..+++++.+.|+.+-.+...    
T Consensus        99 ~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilrp~~v~G~~~~~~~~  176 (321)
T 1e6u_A           99 VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNR--QYGRDYRSVMPTNLYGPHDNFHPS  176 (321)
T ss_dssp             CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECEEESTTCCCCTT
T ss_pred             CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHH--HhCCCEEEEEeCCcCCcCCCCCCC
Confidence            358999999765421                11135899999999999998765  12799999999987543221    


Q ss_pred             ------hhhHHHH-------hh---hC------CCCCHHHHHHHHHHhhcCCC
Q 023465           67 ------KVASKFI-------DL---MG------GFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 ------~~~~~~~-------~~---~~------~~~~~~~~a~~~~~l~~~~~   97 (282)
                            .......       .+   ..      .+...+|++++++.++....
T Consensus       177 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~  229 (321)
T 1e6u_A          177 NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH  229 (321)
T ss_dssp             CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCH
T ss_pred             CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcc
Confidence                  1111111       01   11      23478999999999887643

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=94.31  E-value=0.14  Score=44.70  Aligned_cols=85  Identities=13%  Similarity=-0.004  Sum_probs=57.8

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchh----hhhHH----HHh--hh-
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGL----KVASK----FID--LM-   76 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~----~~~~~----~~~--~~-   76 (282)
                      .++|++||.....    ...|+.||.+.+.+.+.++.  ..|++++.+.|+.+-.+...    .....    ...  .. 
T Consensus        87 ~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~--~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  160 (369)
T 3st7_A           87 PAILLSSSIQATQ----DNPYGESKLQGEQLLREYAE--EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ  160 (369)
T ss_dssp             CEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHH--HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCC
T ss_pred             CeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHH--HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeE
Confidence            3899999987654    67899999999999988754  23688888999877443211    11111    111  00 


Q ss_pred             -------CCCCCHHHHHHHHHHhhcCCCC
Q 023465           77 -------GGFVPMEMVVKGAFELITDESK   98 (282)
Q Consensus        77 -------~~~~~~~~~a~~~~~l~~~~~~   98 (282)
                             ..+..++|++++++.++.....
T Consensus       161 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  189 (369)
T 3st7_A          161 VNDRNVELTLNYVDDIVAEIKRAIEGTPT  189 (369)
T ss_dssp             CSCTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred             ecCCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence                   1235689999999999987654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=94.22  E-value=0.14  Score=47.10  Aligned_cols=88  Identities=10%  Similarity=0.046  Sum_probs=59.2

Q ss_pred             CcEEEEEcCCCc--cC----------------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhh-
Q 023465            7 PGVIINMGSSAG--LY----------------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLK-   67 (282)
Q Consensus         7 ~g~Iv~isS~~~--~~----------------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~-   67 (282)
                      ..++|++||...  ..                +......|+.||.+.+.+.+.++   ..|++++.+.||.+-.+.... 
T Consensus       270 ~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~gi~~~ilRp~~v~G~~~~~~  346 (508)
T 4f6l_B          270 HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV---NNGLDGRIVRVGNLTSPYNGRW  346 (508)
T ss_dssp             TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHH---HTTCEEEEEEECCEESCSSSCC
T ss_pred             CCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHH---HcCCCEEEEecceeccCCCCCc
Confidence            478999999876  10                01245789999999998888753   368999999999884432111 


Q ss_pred             --------hhHHHHh--------------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           68 --------VASKFID--------------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        68 --------~~~~~~~--------------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                              ....+..              ....+...+++|+++++++....
T Consensus       347 ~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~  398 (508)
T 4f6l_B          347 HMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT  398 (508)
T ss_dssp             CCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC
T ss_pred             ccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC
Confidence                    0111111              01125678999999999997765

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=93.98  E-value=0.071  Score=45.92  Aligned_cols=50  Identities=20%  Similarity=0.002  Sum_probs=37.1

Q ss_pred             CcEEEEEcCCCccC-----------CC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCC
Q 023465            7 PGVIINMGSSAGLY-----------PM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPE   58 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG   58 (282)
                      .++||++||.+...           +. +....|++||++++.+++.++. .  .++++..+.|+
T Consensus       116 ~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~  178 (338)
T 1udb_A          116 VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYF  178 (338)
T ss_dssp             CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEEC
T ss_pred             CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeec
Confidence            47999999976531           11 3367899999999999999875 4  36777777653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=93.89  E-value=0.055  Score=47.38  Aligned_cols=84  Identities=12%  Similarity=0.033  Sum_probs=56.9

Q ss_pred             CcEEEEEcCCC-ccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhh---------hHHHH--h
Q 023465            7 PGVIINMGSSA-GLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKV---------ASKFI--D   74 (282)
Q Consensus         7 ~g~Iv~isS~~-~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~---------~~~~~--~   74 (282)
                      -++||++||.. ...+.+....|..||++++.+.+.      .|++++.|.||++.+.+....         .....  .
T Consensus       105 v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~  178 (352)
T 1xgk_A          105 IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH  178 (352)
T ss_dssp             CSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEE
T ss_pred             ccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH------cCCCEEEEecceecCCchhcccccccccccCCCceEEe
Confidence            36999999987 344445557899999999999875      379999999998765443210         00000  0


Q ss_pred             -h-----hCCCCCH-HHHHHHHHHhhcCC
Q 023465           75 -L-----MGGFVPM-EMVVKGAFELITDE   96 (282)
Q Consensus        75 -~-----~~~~~~~-~~~a~~~~~l~~~~   96 (282)
                       +     ...+..+ +|++++++.++.+.
T Consensus       179 ~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          179 APFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             ESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             eccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence             0     0113567 89999999999764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=93.85  E-value=0.19  Score=45.81  Aligned_cols=53  Identities=9%  Similarity=-0.028  Sum_probs=38.9

Q ss_pred             CcEEEEEcCCCccCCCCC----------------------ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCccc
Q 023465            7 PGVIINMGSSAGLYPMYN----------------------DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQ   61 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~   61 (282)
                      .+++|++||.+.......                      ...|+.||.+.+.+.+.++.  ..|++++.+.||.|-
T Consensus       206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~gi~~~ivRpg~v~  280 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAND--LCALPVAVFRCGMIL  280 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHH--HHCCCEEEEEECEEE
T ss_pred             CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHH--HhCCCeEEEECceee
Confidence            358999999654322110                      13499999999999998765  137999999999984

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=93.63  E-value=0.084  Score=44.95  Aligned_cols=88  Identities=11%  Similarity=0.119  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCCccCCC------------CCChhhHhhHHHHHHHHHHhccccCCCcEEEEEe-CCcccCcchh------h
Q 023465            7 PGVIINMGSSAGLYPM------------YNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLC-PEFVQTEMGL------K   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~------------~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~-PG~v~T~~~~------~   67 (282)
                      .+++|++||.......            .....|+.||++.+.+++.++.  ..|++++.+. |+.+.+.+..      .
T Consensus       104 ~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~--~~~~~~~~lR~~~~~g~~~~~~~~~~~~  181 (317)
T 3ajr_A          104 VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYE--KFGLDVRSLRYPGIISYKAEPTAGTTDY  181 (317)
T ss_dssp             CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECEEECSSSCCCSCSSTH
T ss_pred             CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHH--hcCCeEEEEecCcEeccCCCCCCcchhH
Confidence            4699999998764321            1357899999999999988754  2378999996 4444442210      0


Q ss_pred             hhHHHHhhh--------------CCCCCHHHHHHHHHHhhcCC
Q 023465           68 VASKFIDLM--------------GGFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        68 ~~~~~~~~~--------------~~~~~~~~~a~~~~~l~~~~   96 (282)
                      ....+...+              ..+...+|++++++.++...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  224 (317)
T 3ajr_A          182 AVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEAD  224 (317)
T ss_dssp             HHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCC
Confidence            001111100              01245789999998888654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=93.58  E-value=0.092  Score=44.13  Aligned_cols=90  Identities=12%  Similarity=0.096  Sum_probs=54.8

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh-----hhC---
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID-----LMG---   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-----~~~---   77 (282)
                      -++||++||.......+    |..+|..     ..+.. +...|++++.|.||++.+++..........     +.+   
T Consensus        98 v~~iv~~Ss~~~~~~~~----~~~~~~~-----~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~  168 (289)
T 3e48_A           98 VAHIIFIGYYADQHNNP----FHMSPYF-----GYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGR  168 (289)
T ss_dssp             CCEEEEEEESCCSTTCC----STTHHHH-----HHHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCE
T ss_pred             CCEEEEEcccCCCCCCC----CccchhH-----HHHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCce
Confidence            46899999965433222    3333321     12233 556789999999999988765322211111     111   


Q ss_pred             -CCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           78 -GFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        78 -~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                       .+..++|+++++++++++....+....+
T Consensus       169 ~~~i~~~Dva~~~~~~l~~~~~~g~~~~~  197 (289)
T 3e48_A          169 INYITRNDIARGVIAIIKNPDTWGKRYLL  197 (289)
T ss_dssp             EEEECHHHHHHHHHHHHHCGGGTTCEEEE
T ss_pred             eeeEEHHHHHHHHHHHHcCCCcCCceEEe
Confidence             1568999999999999876544333333

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=93.08  E-value=0.098  Score=36.59  Aligned_cols=40  Identities=23%  Similarity=0.376  Sum_probs=28.5

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCeeEEccCCcc------ccEEeecCCCe
Q 023465          186 AVGLIAAVGDSVN---------NVKVGTPAAIMTFGSY------AEFTMVPSKHI  225 (282)
Q Consensus       186 ~~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~~------ae~~~v~~~~~  225 (282)
                      ..|+|++||++..         .+++||+|....+++.      .||+.+.++.+
T Consensus        36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ey~i~re~DI   90 (95)
T 3nx6_A           36 TKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDI   90 (95)
T ss_dssp             EEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTEEEEEEEGGGE
T ss_pred             cccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCEEEEEEEHHHE
Confidence            4799999999753         5899999998766542      34555555544

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A

Probab=93.02  E-value=0.28  Score=34.57  Aligned_cols=71  Identities=20%  Similarity=0.317  Sum_probs=41.9

Q ss_pred             CCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC---------CCCCCCeeEEccCCcc--
Q 023465          147 PESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN---------NVKVGTPAAIMTFGSY--  214 (282)
Q Consensus       147 ~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~~--  214 (282)
                      |-.+-||||... .-...-+.+......   .-|      ..|+|++||++..         .+++||+|....+++.  
T Consensus        10 PL~DRVlVk~~e~e~kT~gGI~LP~sak---eKp------~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtev   80 (100)
T 1we3_O           10 PLGDRVVVKRIEEEPKTKGGIVLPDTAK---EKP------QKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEI   80 (100)
T ss_dssp             ECTTCEEEEECCCCSSCTTCCCCCTTTS---CCC------SEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEE
T ss_pred             EeCCEEEEEEccccccccceEEeCcccc---cCC------cCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEE
Confidence            445778888865 222222222222211   112      4799999998742         4899999998765443  


Q ss_pred             ----ccEEeecCCCee
Q 023465          215 ----AEFTMVPSKHIL  226 (282)
Q Consensus       215 ----ae~~~v~~~~~~  226 (282)
                          .||+++.++.++
T Consensus        81 k~dgeeyli~re~DIl   96 (100)
T 1we3_O           81 EIDGEEYVILSERDLL   96 (100)
T ss_dssp             ECSSCEEEEECTTTEE
T ss_pred             EECCEEEEEEEhHHEE
Confidence                356666665543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=92.72  E-value=0.31  Score=40.78  Aligned_cols=32  Identities=13%  Similarity=0.233  Sum_probs=25.1

Q ss_pred             HHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          247 IALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       247 ~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ..+....++++++||-.|+ |. |..++.+++.+
T Consensus       103 ~i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~  134 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAV  134 (277)
T ss_dssp             HHHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHT
T ss_pred             HHHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHh
Confidence            3446778899999999998 55 88888888763

>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O

Probab=92.50  E-value=0.13  Score=37.01  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=22.2

Q ss_pred             ceEEEEEeCCCCC--CCCCCCeeEEccCCccc
Q 023465          186 AVGLIAAVGDSVN--NVKVGTPAAIMTFGSYA  215 (282)
Q Consensus       186 ~~G~V~~vG~~v~--~~~~Gd~V~~~~~G~~a  215 (282)
                      .-|+|++||+++.  .+|+||+|...- |.|+
T Consensus        47 ~~g~VvAVG~g~~~~~vKvGD~Vl~~k-g~~~   77 (111)
T 1g31_A           47 ELCVVHSVGPDVPEGFCEVGDLTSLPV-GQIR   77 (111)
T ss_dssp             EEEEEEEECTTSCTTSCCTTCEEEEEG-GGCE
T ss_pred             ceEEEEEECCCCccccccCCCEEEECC-Cccc
Confidence            3699999999875  499999998743 4443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=92.27  E-value=0.2  Score=43.84  Aligned_cols=87  Identities=9%  Similarity=-0.007  Sum_probs=53.9

Q ss_pred             cEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCc-----ch----h
Q 023465            8 GVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTE-----MG----L   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~-----~~----~   66 (282)
                      ++||++||.+....           ......|+.||++++.+++.++. +   ++.+..+.|..+-.+     +.    .
T Consensus       149 ~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~  225 (375)
T 1t2a_A          149 VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKIS  225 (375)
T ss_dssp             CEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH
T ss_pred             ceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHH
Confidence            69999999766432           22457899999999999998865 4   466655555433211     11    0


Q ss_pred             hhhHHHHh------------hhCCCCCHHHHHHHHHHhhcCCC
Q 023465           67 KVASKFID------------LMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 ~~~~~~~~------------~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ........            ....+...+|++++++.++....
T Consensus       226 ~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~  268 (375)
T 1t2a_A          226 RSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE  268 (375)
T ss_dssp             HHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence            11001000            01134679999999999987644

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=92.00  E-value=0.18  Score=43.24  Aligned_cols=87  Identities=8%  Similarity=0.017  Sum_probs=54.0

Q ss_pred             cEEEEEcCCCccCCC-----------CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcc-----h----h
Q 023465            8 GVIINMGSSAGLYPM-----------YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM-----G----L   66 (282)
Q Consensus         8 g~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~-----~----~   66 (282)
                      +++|++||.+.....           .....|+.||++.+.+++.++. +   ++++..+.|+.+--+.     .    .
T Consensus       131 ~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~  207 (335)
T 1rpn_A          131 TRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVT  207 (335)
T ss_dssp             SEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHH
T ss_pred             CeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHH
Confidence            699999997654221           1246899999999999998865 4   5666667666542221     0    0


Q ss_pred             hhhHHHHh---h---h------CCCCCHHHHHHHHHHhhcCCC
Q 023465           67 KVASKFID---L---M------GGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        67 ~~~~~~~~---~---~------~~~~~~~~~a~~~~~l~~~~~   97 (282)
                      ........   .   .      ..+...+|++++++.++....
T Consensus       208 ~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  250 (335)
T 1rpn_A          208 DAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK  250 (335)
T ss_dssp             HHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC
Confidence            00001000   0   0      124567999999999987654

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=91.21  E-value=0.76  Score=32.17  Aligned_cols=40  Identities=28%  Similarity=0.408  Sum_probs=28.1

Q ss_pred             ceEEEEEeCCCC---------CCCCCCCeeEEcc-CCcc------ccEEeecCCCe
Q 023465          186 AVGLIAAVGDSV---------NNVKVGTPAAIMT-FGSY------AEFTMVPSKHI  225 (282)
Q Consensus       186 ~~G~V~~vG~~v---------~~~~~Gd~V~~~~-~G~~------ae~~~v~~~~~  225 (282)
                      ..|+|++||++.         -.+++||+|.... +++.      .||+++.++.+
T Consensus        36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dgeey~i~re~DI   91 (97)
T 1pcq_O           36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDI   91 (97)
T ss_dssp             CEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETTEEEEEEEGGGE
T ss_pred             cccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECCEEEEEEEhHHE
Confidence            469999999863         1389999999876 5442      25666665544

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=90.89  E-value=0.28  Score=46.93  Aligned_cols=53  Identities=11%  Similarity=-0.036  Sum_probs=40.3

Q ss_pred             CcEEEEEcCCCccCC---------------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcc
Q 023465            7 PGVIINMGSSAGLYP---------------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFV   60 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~---------------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v   60 (282)
                      .++||++||.+....               ......|+.||++++.+++.++. . ..++++..+.|+.+
T Consensus       127 ~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~v  195 (699)
T 1z45_A          127 VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNP  195 (699)
T ss_dssp             CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEE
T ss_pred             CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccc
Confidence            479999999765311               12346899999999999999876 4 46899999987654

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=90.13  E-value=0.33  Score=34.19  Aligned_cols=40  Identities=20%  Similarity=0.416  Sum_probs=28.4

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCeeEEccCCcc------ccEEeecCCCe
Q 023465          186 AVGLIAAVGDSVN----------NVKVGTPAAIMTFGSY------AEFTMVPSKHI  225 (282)
Q Consensus       186 ~~G~V~~vG~~v~----------~~~~Gd~V~~~~~G~~------ae~~~v~~~~~  225 (282)
                      ..|+|++||++..          .+++||+|....+++.      .||+++.++.+
T Consensus        38 ~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dgeey~i~re~DI   93 (99)
T 1p3h_A           38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDV   93 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETTEEEEEEEGGGE
T ss_pred             ceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECCEEEEEEEhHhE
Confidence            5799999998741          3899999998766543      24666665544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=89.98  E-value=0.37  Score=41.84  Aligned_cols=37  Identities=14%  Similarity=0.016  Sum_probs=29.3

Q ss_pred             cEEEEEcCCCccCC-----------CCCChhhHhhHHHHHHHHHHhcc
Q 023465            8 GVIINMGSSAGLYP-----------MYNDPIYSASKGGVVLFTRSLTP   44 (282)
Q Consensus         8 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~   44 (282)
                      ++||++||.+....           ......|+.||++++.+++.++.
T Consensus       125 ~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  172 (372)
T 1db3_A          125 TRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRE  172 (372)
T ss_dssp             CEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            79999999765322           12367899999999999999875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=89.73  E-value=0.26  Score=41.55  Aligned_cols=67  Identities=15%  Similarity=0.169  Sum_probs=45.8

Q ss_pred             CChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHH-----HHh---------hhCCCCCHHHHHHHH
Q 023465           24 NDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASK-----FID---------LMGGFVPMEMVVKGA   89 (282)
Q Consensus        24 ~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~-----~~~---------~~~~~~~~~~~a~~~   89 (282)
                      ....| .+|++++.+.+.      .|++++.|.||++.+++.......     ...         ....+..++|+++.+
T Consensus       126 ~~~~y-~sK~~~e~~~~~------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  198 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFT  198 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHH
T ss_pred             chhHH-HHHHHHHHHHHH------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHH
Confidence            35689 999999887764      478999999999887654321110     000         011346899999999


Q ss_pred             HHhhcCCC
Q 023465           90 FELITDES   97 (282)
Q Consensus        90 ~~l~~~~~   97 (282)
                      +.+++++.
T Consensus       199 ~~~l~~~~  206 (307)
T 2gas_A          199 IRAANDPN  206 (307)
T ss_dssp             HHHHTCGG
T ss_pred             HHHHcCcc
Confidence            99997654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=89.28  E-value=0.22  Score=41.95  Aligned_cols=84  Identities=10%  Similarity=-0.066  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCCccC--CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHH---HH------hh
Q 023465            7 PGVIINMGSSAGLY--PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASK---FI------DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~--~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~---~~------~~   75 (282)
                      -++||++||.....  .......|..+|++++.+.+.      .|++++.|.||++.+++.....+.   ..      .+
T Consensus       107 v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~  180 (299)
T 2wm3_A          107 LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLP  180 (299)
T ss_dssp             CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCC
T ss_pred             CCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEec
Confidence            46899965543221  112246799999999988775      479999999999987754311110   00      00


Q ss_pred             hC----CCCCHHHHHHHHHHhhcCC
Q 023465           76 MG----GFVPMEMVVKGAFELITDE   96 (282)
Q Consensus        76 ~~----~~~~~~~~a~~~~~l~~~~   96 (282)
                      .+    .+..++|+++.+..++.+.
T Consensus       181 ~~~~~~~~i~~~Dva~~~~~~l~~~  205 (299)
T 2wm3_A          181 TGDVPMDGMSVSDLGPVVLSLLKMP  205 (299)
T ss_dssp             CTTSCEEEECGGGHHHHHHHHHHSH
T ss_pred             CCCCccceecHHHHHHHHHHHHcCh
Confidence            01    2458999999999998753

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=83.78  E-value=0.85  Score=40.32  Aligned_cols=24  Identities=25%  Similarity=0.289  Sum_probs=22.4

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+|+|+ |.+|+.++++|+.+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~  194 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRL  194 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC
Confidence            6899999998 99999999999975

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=83.54  E-value=0.87  Score=40.55  Aligned_cols=24  Identities=29%  Similarity=0.313  Sum_probs=22.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+|+|+ |.+|+.++++|+.+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~  194 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSL  194 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC
Confidence            5899999998 99999999999975

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=81.92  E-value=1.1  Score=39.18  Aligned_cols=24  Identities=21%  Similarity=0.278  Sum_probs=21.7

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      ++++|+|+|+ |++|+.++++++.+
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~  189 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGL  189 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC
Confidence            3599999999 99999999999875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=80.98  E-value=4.3  Score=37.13  Aligned_cols=87  Identities=10%  Similarity=0.041  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCCccC-----------CCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHHHhh
Q 023465            7 PGVIINMGSSAGLY-----------PMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKFIDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~   75 (282)
                      .+++|++||.....           .......|+.+|...+.+.+.   ....|++++.+.||.+-.+-.. ....+...
T Consensus       246 ~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~---~~~~gi~~~ilRp~~v~Gp~~~-~~~~~~~~  321 (516)
T 3oh8_A          246 CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAP---ASDAGKRVAFIRTGVALSGRGG-MLPLLKTL  321 (516)
T ss_dssp             CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH---HHHTTCEEEEEEECEEEBTTBS-HHHHHHHT
T ss_pred             CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH---HHhCCCCEEEEEeeEEECCCCC-hHHHHHHH
Confidence            46899999965432           012345688888766544222   4567899999999998765321 11111110


Q ss_pred             --------------hCCCCCHHHHHHHHHHhhcCCC
Q 023465           76 --------------MGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        76 --------------~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                                    ...+...+|+++++++++....
T Consensus       322 ~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  357 (516)
T 3oh8_A          322 FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ  357 (516)
T ss_dssp             TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred             HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence                          0134578999999999998655

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=80.06  E-value=1.4  Score=38.81  Aligned_cols=24  Identities=25%  Similarity=0.291  Sum_probs=22.2

Q ss_pred             CCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          256 SGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       256 ~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      +|++|+|+|+ |++|+.+++.++.+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~  190 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGM  190 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC
Confidence            6899999998 99999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-15
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-14
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-13
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-13
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-12
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	8e-12
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-11
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-11
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-11
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-11
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-10
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-10
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-10
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-10
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-09
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-09
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	6e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-09
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	8e-09
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-09
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-08
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-08
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-08
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-08
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-08
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-08
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-07
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-07
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-07
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-07
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	9e-07
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-06
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-06
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-06
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-06
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-06
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-06
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-06
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-06
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	9e-06
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	9e-06
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-05
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-05
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	6e-05
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	6e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-05
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-04
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-04
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	8e-04
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	0.001
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	0.001
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.002
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	0.002
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.003

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.4 bits (177), Expect = 1e-15
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                + G IIN+ S  GL        YS+SK GV+ FT+SL      + I +N + P F
Sbjct: 132 RMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGF 191

Query: 60  VQTEMGLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
           + ++M  K++ +    +   +P       E V   A  L +D+S      +I 
Sbjct: 192 ISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG-----YIN 239

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 68.5 bits (167), Expect = 3e-14
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
            +     G+I N+ S  G   ++  P+YSASK  VV FT SL       G+    + P  
Sbjct: 124 KRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGI 183

Query: 60  VQTEM 64
            +T +
Sbjct: 184 TRTPL 188

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (162), Expect = 2e-13
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT----PYKRKGIRINVLC 56
                  G I+ + S+AG   +     Y +SK   V F ++LT      +  G++   LC
Sbjct: 129 AMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLC 188

Query: 57  PEFVQTEM 64
           P FV T  
Sbjct: 189 PNFVNTGF 196

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (159), Expect = 4e-13
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 1   MQAAKKPGVIINMGSSAGL--YPMYNDPIYSASKGGVVLFTRSLT---PYKRKGIRINVL 55
            +     G IIN+ S +G    P+     YSA+K  V   T  L       +  IR   +
Sbjct: 136 KERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCI 195

Query: 56  CPEFVQTEMGLKVASKFIDLMGGFVPM 82
            P  V+T+   K+  K  +        
Sbjct: 196 SPGVVETQFAFKLHDKDPEKAAATYEQ 222

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 1e-12
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT---PYKRKGIRINVLCPEFV 60
             + G+IINM S AGL P+   P+Y ASK G+V FTRS          G+R+N +CP FV
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 184

Query: 61  QTEM--------GLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
            T +         +    ++ D +   +         ++  G   LI D++  G+ + IT
Sbjct: 185 NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKIT 244

Query: 107 NRRGMEY 113
             +G+ +
Sbjct: 245 TSKGIHF 251

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT---PYKRKGIRINVLCPEFV 60
            +  G I+ + S AG         YSASK  +  F  S+       R  + I +     +
Sbjct: 139 KQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198

Query: 61  QTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI---TDESKAGSCLWIT 106
            TE  +K  S  + +     P E       +      +E    S LW T
Sbjct: 199 DTETAMKAVSGIVHMQA--APKEECALEIIKGGALRQEEVYYDSSLWTT 245

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 8e-12
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            K  G +IN+ S  G         Y A+KG V   T++L       G+R+N + P  + T
Sbjct: 127 RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWT 186

Query: 63  EMGLKVASKFID 74
            +  ++A+   D
Sbjct: 187 PLWEELAALMPD 198

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 1e-11
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +  G ++  GS  GL  +  + +Y ASK  +     SL       G+ ++++    V T
Sbjct: 131 RRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

Query: 63  EM 64
             
Sbjct: 191 AF 192

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.1 bits (148), Expect = 2e-11
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQ 61
             +  G II   S++G+Y  +    YSA+K G++    +L    ++  I  N + P    
Sbjct: 137 KKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS 196

Query: 62  TEMGLKVASKFIDLM 76
                 +    ++ +
Sbjct: 197 RMTETVMPEDLVEAL 211

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
             K+ G IIN+ S  GL        Y+A+K GV+ F+++       + I +NV+CP F+ 
Sbjct: 126 MKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIA 185

Query: 62  TEMGLKVASKFIDLMGGFVPM 82
           ++M  K+       + G +P+
Sbjct: 186 SDMTAKLGEDMEKKILGTIPL 206

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 60.0 bits (145), Expect = 3e-11
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL---TPYKRKGIRINVLCP 57
           M+       IINM S  G     +   Y+ASKG V + ++S       K   +R+N + P
Sbjct: 128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187

Query: 58  EFVQTEM 64
            +++T +
Sbjct: 188 GYIKTPL 194

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 59.8 bits (144), Expect = 3e-11
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
             K+ G II +GS  G         Y+A+K G++ F++SL      +GI +NV+ P F++
Sbjct: 125 MKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIE 184

Query: 62  TEMGLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
           T+M   ++      +   VP       + +      L +DE+      +IT
Sbjct: 185 TDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA-----YIT 230

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 58.7 bits (141), Expect = 7e-11
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 3   AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQ 61
           A  + GVI+N  S A          Y+ASKGGVV  T          GIR+  + P    
Sbjct: 122 AEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD 181

Query: 62  TEMGLKVASKFIDLMGGFVPM 82
           T +   +  K    +   VP 
Sbjct: 182 TPLLQGLPEKAKASLAAQVPF 202

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
               G I+N+ S+AGL  +     Y ASK GV   ++          IR+N + P    T
Sbjct: 127 DAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186

Query: 63  EMGLKVASKFIDLMGGFVPM-------EMVVKGAFELITDESKAGSCLWIT 106
            M  +   +  +      PM         +     +L++D S      ++T
Sbjct: 187 PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS-----YVT 232

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                  G I+N+ S  GL+    +  Y+ASKGG+V  TRSL        IR+N + P  
Sbjct: 121 EMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGA 180

Query: 60  VQTEMGLKVASKFID 74
           + TE  L+  +   D
Sbjct: 181 IATEAVLEAIALSPD 195

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.6 bits (136), Expect = 4e-10
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEM 64
           K    I + +S           Y+AS  GVV  TR+L     R GIR+N L P F++T M
Sbjct: 126 KNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185

Query: 65  GLKVASKFIDLMGGFVPM 82
             KV  K  +      P+
Sbjct: 186 TAKVPEKVREKAIAATPL 203

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 56.5 bits (136), Expect = 5e-10
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
             ++ K  ++     ++GL+   + P YS +K  +  +TR+      + GIR+N + P  
Sbjct: 134 HLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGL 193

Query: 60  VQTEMG 65
           V T  G
Sbjct: 194 VATGFG 199

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.8 bits (134), Expect = 6e-10
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M     PG I+N+ S        N   YS++KG + + T+++        IR+N + P  
Sbjct: 120 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 179

Query: 60  VQTEMGLKVAS--KFIDLMGGFVPM 82
           V T+MG KV++  +F   +    P+
Sbjct: 180 VLTDMGKKVSADPEFARKLKERHPL 204

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 1e-09
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
                + GVIIN  S A          YSASKGG+V  T  +       GIR+  + P  
Sbjct: 136 PDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGL 195

Query: 60  VQTEMGLKVASKFIDLMGGFVPM 82
             T +   +  K  + +   VP 
Sbjct: 196 FGTPLLTSLPEKVCNFLASQVPF 218

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 4e-09
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 14/115 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           + A   PG I+N+ S      + N  +Y ++KG + + T+ +        IR+N + P  
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181

Query: 60  VQTEMGLKVASKFIDL--------MGGFVPMEMVVKGAFELITDESKAGSCLWIT 106
           V T MG    S             +G F  +E VV     L++D S        T
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG-----MTT 231

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 53.2 bits (127), Expect = 6e-09
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           +   +  G I  + S A      +  IY  SK G      ++    ++  +RI  + P  
Sbjct: 130 LMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 189

Query: 60  VQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKA 99
           V T M  KV  +   LM   +P E +     +     S+ 
Sbjct: 190 VYTPMWGKVDDEMQALMM--MP-EDIAAPVVQAYLQPSRT 226

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 6e-09
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 11  INMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQTEMGLK 67
              G+ A L        Y  +KG V    +SL         G     + P  + T M  K
Sbjct: 125 TLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK 184

Query: 68  VASKFIDLMGGFVPMEMVVKGAFELITDESK 98
              +       + P+E +V+   + IT   +
Sbjct: 185 SMPE--ADFSSWTPLEFLVETFHDWITGNKR 213

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 52.9 bits (126), Expect = 8e-09
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
               +  G I+N  S AG+    N   Y  SKG ++  T +         IR+N + P +
Sbjct: 128 QMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY 187

Query: 60  VQTEM 64
           +    
Sbjct: 188 MGPGF 192

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 52.4 bits (125), Expect = 9e-09
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 12/108 (11%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEM 64
           K G +I +GS +GL+ + N   Y+ASK GV+   RS+     +  +  NV+ P ++ T+M
Sbjct: 123 KFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM 182

Query: 65  GLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
              +  +       F+P         V      L ++++      +I+
Sbjct: 183 TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-----YIS 225

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                  G IIN+ S+     +     Y ++K   + FTR+L +   + GI +N + P  
Sbjct: 125 GMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSL 184

Query: 60  VQTEM 64
           V+T  
Sbjct: 185 VRTAT 189

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 1e-08
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 1   MQAAKKPGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
              A+K G IINM S A     + N  +YS +K  V+  T+S+   + ++GIR N +CP 
Sbjct: 119 KMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPG 178

Query: 59  FVQTEM 64
            V T  
Sbjct: 179 TVDTPS 184

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 51.2 bits (122), Expect = 3e-08
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 1   MQAAKKPGVIIN-------MGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRI 52
               ++ G I+        + + + L        Y++SK       + L   +   GIR+
Sbjct: 133 WLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRV 192

Query: 53  NVLCPEFVQTEMGLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
           N L P +V T+    +  K  D     +P+      E +   A  L++D +      ++T
Sbjct: 193 NALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHAT-----YMT 247

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 19/85 (22%), Positives = 36/85 (42%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEM 64
              G +I   S+AG YP    P+Y+A+K  +V   R L       +R+N +    + +++
Sbjct: 132 ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL 191

Query: 65  GLKVASKFIDLMGGFVPMEMVVKGA 89
               +          VP+  ++K  
Sbjct: 192 RGPSSLGMGSKAISTVPLADMLKSV 216

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 50.4 bits (120), Expect = 6e-08
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                K  ++      AG       P Y+ +K  +  +TR       + G+R+N + P  
Sbjct: 131 HLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGA 190

Query: 60  VQTEM 64
           V T  
Sbjct: 191 VATGF 195

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 50.0 bits (119), Expect = 7e-08
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 5   KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQ 61
           +  G IINM S +   P+     YSASK  V   TR+       +   IR+N + P+ + 
Sbjct: 128 ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIY 187

Query: 62  TEM 64
           T M
Sbjct: 188 TPM 190

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +  A+K    +++ +             +++K GV   ++SL   + + G+R NV+ P  
Sbjct: 149 LIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGP 208

Query: 60  VQTEM---GLKVASKFIDLMGGFVPM 82
           ++T+     L     F   M G +P 
Sbjct: 209 IKTKGAFSRLDPTGTFEKEMIGRIPC 234

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
              A + G ++ + S +G   +  + +Y A+KG +   TR L   + +  IR+N + P  
Sbjct: 131 FLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGV 190

Query: 60  VQTEM 64
           + T +
Sbjct: 191 IATSL 195

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
              A K  ++      AG     +   Y+ +K  +  +TRS      + GIR+N + P  
Sbjct: 134 HLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGM 193

Query: 60  VQTEM 64
           V+T  
Sbjct: 194 VETGF 198

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 9   VIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQTEMG 65
           ++   G++A + P  +   Y  +K  V   T SL            +  + P  + T M 
Sbjct: 123 LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 182

Query: 66  LKVASKFIDLMGGFVPMEMVVKGAFELITDESKA---GSCLWITNRRGM 111
            K           + P+  + +   +  T+ S     G+ L IT   G 
Sbjct: 183 RKWMPN--ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENGT 229

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 46.6 bits (110), Expect = 8e-07
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 4   AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            +  G I+N+ S+ G   + +   YSASK GVV FT++L     R GI +N +CP FV+T
Sbjct: 129 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVET 188

Query: 63  EMGLKVASKFIDLMGGFVP 81
            M   V   + D+      
Sbjct: 189 PMAASVREHYSDIWEVSTE 207

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 46.7 bits (110), Expect = 9e-07
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
               +  G IIN+ S+ GL    N   Y A+K GVV FT+        +GI  N +CP +
Sbjct: 128 HMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGW 187

Query: 60  VQTEMGLKVASKFIDLMG 77
           V+T +  K  S   +  G
Sbjct: 188 VRTPLVEKQISALAEKNG 205

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 12  NMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA 69
           ++  +      +    Y  SK  + +F R+L    K   + +   CP +VQT +G K A
Sbjct: 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA 214

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 12/108 (11%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFV 60
             +      ++N+ S   L P     +Y A K    +  + L   +   +R+    P  +
Sbjct: 142 QDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA-AEEPSVRVLSYAPGPL 200

Query: 61  QTEMGLKVASKFID-----------LMGGFVPMEMVVKGAFELITDES 97
             +M         D             G  V      +    L+  ++
Sbjct: 201 DNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDT 248

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 2/95 (2%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIY-SASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
            +  +  G +I MGS  G           S SKG +  F R +      K I +NV+ P 
Sbjct: 139 YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPG 198

Query: 59  FVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
            ++T+M   V  ++I         E+    A +  
Sbjct: 199 GIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 233

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-06
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 10  IINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLT-----PYKRKGIRINVLCPEFVQTEM 64
           + +          +    Y  +K GV + +R          K   I +N  CP +V+T+M
Sbjct: 174 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233

Query: 65  GLKVASK 71
               A+K
Sbjct: 234 AGPKATK 240

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 14/110 (12%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEM 64
               ++ +        + N  +   +K  +    R +      +G+R+N +    ++T  
Sbjct: 136 PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195

Query: 65  GLKVASKFIDL--------MGGFVPMEMVVKGAFELITDESKAGSCLWIT 106
              +      L        +   V +E V   A  L +D S       I+
Sbjct: 196 ASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA-----GIS 240

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 44.7 bits (105), Expect = 4e-06
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 13  MGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGLKVASK 71
           +  S      +    Y+A K GVV   R+L     RKG+R+NVL P  +QT M   +   
Sbjct: 133 LTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW 192

Query: 72  FIDLMGGFVPM 82
             +   G  P+
Sbjct: 193 AWEQEVGASPL 203

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 22/125 (17%), Positives = 52/125 (41%), Gaps = 12/125 (9%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
               K  G I+ + S + + P+ N    ++++  +  F ++L       GI +N + P +
Sbjct: 111 AMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 170

Query: 60  VQTEMGLKVASK-FIDLMGGFVPM------EMVVKGAFELITDESKA--GSCLWITNRRG 110
            +TE   ++ S+     +   +PM      E +      L ++++    G  + +    G
Sbjct: 171 TETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG--G 228

Query: 111 MEYWP 115
           +  +P
Sbjct: 229 LSKFP 233

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.4 bits (104), Expect = 5e-06
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 6   KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTE- 63
           + G I+ +   A    +    + + +K  +    R L      KG+R+N +    V+T  
Sbjct: 138 EGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197

Query: 64  -MGLKVASKFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
              +   +K  D +    P+      E V      L++  +       IT
Sbjct: 198 ARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS-----GIT 242

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 44.0 bits (103), Expect = 7e-06
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           +  A + G +I + S AG   + +  +YSASKG +   T+SL   + +  IR+N + P  
Sbjct: 129 LLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGV 188

Query: 60  VQTEM 64
           + T +
Sbjct: 189 ILTPL 193

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 1   MQAAKKPGVIINMG-SSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPE 58
           ++  ++ G II     +A +  + N  +Y+ SK  V  F R+       KG+ +N + P 
Sbjct: 127 LKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPG 186

Query: 59  FVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELI 93
            V+T+M  + +  +       +P E + +G   + 
Sbjct: 187 GVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN 221

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           +   +  G+++N  S  G+  + N   Y+A+K GVV  TR+    Y R GIRIN + P  
Sbjct: 129 IMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGA 188

Query: 60  VQTEM 64
           + T M
Sbjct: 189 IWTPM 193

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 13/114 (11%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEF 59
           +  A   G II M S AG+       IYSA+KG +    R+L   +   GIR N + P  
Sbjct: 131 LLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAV 190

Query: 60  VQTEMGLKVAS-KFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
           + T +   V   +F  ++    P+      E V      L    +      +IT
Sbjct: 191 IATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS-----YIT 239

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 42.0 bits (98), Expect = 4e-05
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 5   KKPGVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
            K G I+   S +          +Y+A+K  V+  T SL T     GIR+N + P  V +
Sbjct: 133 AKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVAS 192

Query: 63  EMGLKV-----------ASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWIT 106
            +   V           A +  +L G  +  E V      L  DESK     +++
Sbjct: 193 PLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK-----YVS 242

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 209 MTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA 266
              G  +E+  VP   ++P+ +     E +      +       +  P + K +L     
Sbjct: 96  SRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQ 155

Query: 267 GG 268
           G 
Sbjct: 156 GR 157

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 209 MTFGSYAEFTMVPSKHILPV-ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA 264
             FG Y+E+  +  + ++P+    +     +  + L  ++     G   G+ V+  A
Sbjct: 96  THFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                  G IIN+ S  GL        Y+A+K  V   T+S        GIR+N + P  
Sbjct: 125 PMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGL 184

Query: 60  VQTEMGLKVASKFID-LMGGFVPMEMVVKGAFELITDESKAGSCLWIT 106
           V+T M   V        +G       V      L +DES      + T
Sbjct: 185 VKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESS-----YST 227

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
               +  G I+N+                A++ GV   T+SL   +   GIRIN + P  
Sbjct: 139 SWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGV 197

Query: 60  VQTEMGLKVAS----KFIDLMGGFVPM 82
           + ++  ++        F +     +P 
Sbjct: 198 IYSQTAVENYGSWGQSFFEGSFQKIPA 224

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)

Query: 20  YPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGLKVAS--KFIDLM 76
             M N   Y+ASKGGV   T++L   + R GIR+NV+ P + +T+M   V S  + +D M
Sbjct: 148 VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYM 207

Query: 77  GGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
              +P+      E +   A  L ++E+K     ++T
Sbjct: 208 LKRIPLGRTGVPEDLKGVAVFLASEEAK-----YVT 238

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.3 bits (90), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7   PGVIINMGSSAGLYPMYNDP---IYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQT 62
              IINM S  G      D     Y  SK  +   T+SL      + I    L P +V+T
Sbjct: 146 RAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 205

Query: 63  EMG 65
           +MG
Sbjct: 206 DMG 208

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 9/78 (11%)

Query: 203 GTPAAIMTFGSYAEFTMVPSK----HILPVARPDPEVVAMLTSGLTASIALEQAGPASGK 258
           G        G  AE+ +VP        LP      E + +        I+L+ A    G 
Sbjct: 123 GYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG- 181

Query: 259 KVLVTAAAGGTGQFAVQV 276
                  AG   +F +  
Sbjct: 182 ----EFDAGVPKKFVIDP 195

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 13/103 (12%)

Query: 12  NMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEFVQTEMGLKVAS 70
            + S A      N   Y++SK       R++      K IR+N + P  + T+    V +
Sbjct: 143 TITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT 202

Query: 71  -KFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
            +    M    P+      + +   A  L +  +      W++
Sbjct: 203 PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS-----WVS 240

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 237 AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQV 276
           A+   GLT+ I +++ G     S + ++V+ AAG  G  A Q+
Sbjct: 8   AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQI 50

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (83), Expect = 0.001
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 231 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVY 277
           P      +L  GLT    L + G   GKKV +    GG G     + 
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIV-GLGGIGSMGTLIS 47

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 12  NMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS 70
           N  S AG        +YS+SK  V   T++        GI +N  CP  V+T M  ++  
Sbjct: 135 NACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDR 194

Query: 71  KFIDLMGGFVPMEM 84
           +  +  G  +    
Sbjct: 195 QVSEAAGKPLGYGT 208

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
                  G +INM S     P      Y+ASKGG+ L T +L   Y  KGIR+N + P  
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190

Query: 60  VQTEMGLKVAS--KFIDLMGGFVPM------EMVVKGAFELITDESKAGSCLWIT 106
           + T +  +  +  +    +   +PM      E +   A  L + E+      ++T
Sbjct: 191 INTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEAS-----YVT 240

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 1   MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSL-TPYKRKGIRINVLCPEF 59
           M A  + G IINM S AG        +Y A+K  V+  T+S      R GI +N + P  
Sbjct: 125 MIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGV 184

Query: 60  VQTEMGLKVASKFIDLMG 77
           V  E    V +KF D   
Sbjct: 185 VDGEHWDGVDAKFADYEN 202

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.92
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.91
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.89
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.89
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.89
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.89
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.89
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.89
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.88
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.88
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.88
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.88
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.88
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.88
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.87
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.87
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.87
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.87
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.87
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.87
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.86
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.86
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.86
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.85
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.85
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.84
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.84
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.84
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.84
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.84
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.83
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.83
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.83
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.83
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.82
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.82
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.82
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.8
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.8
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.79
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.79
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.78
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.78
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.78
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.75
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.74
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.74
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.73
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.73
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.69
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.69
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.65
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.63
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.62
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.59
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.57
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.57
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.5
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.43
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.38
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.01
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.58
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	91.01
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	86.88
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	84.08
d1we3o_	96	Chaperonin-10 (GroES) {Thermus thermophilus [TaxId	82.72
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	82.38
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	81.38

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.7e-29  Score=194.01  Aligned_cols=123  Identities=20%  Similarity=0.293  Sum_probs=112.4

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc--CCccccE
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEF  217 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~G~~ae~  217 (282)
                      +++.|+|+++||||||++ ++|+.|.+.+.|.+.....+|.++|||++|+|+++|+++++|++||||++..  +|+||||
T Consensus        22 ~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~  101 (150)
T d1yb5a1          22 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEY  101 (150)
T ss_dssp             EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSE
T ss_pred             ecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeeccccCcccccccccccccccc
Confidence            567889999999999999 9999999998888777778899999999999999999999999999998864  5999999


Q ss_pred             EeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEe
Q 023465          218 TMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVT  263 (282)
Q Consensus       218 ~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~  263 (282)
                      +++|++.++++|+  +++++|+++++..|+|+++ ..+..++|++|||.
T Consensus       102 ~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         102 ALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999  7888999999999999988 66677999999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=1.5e-29  Score=203.06  Aligned_cols=128  Identities=20%  Similarity=0.202  Sum_probs=113.6

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc----
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----  210 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----  210 (282)
                      +..++|.|+|+++|||||+++ ++|.+|.+.+.+..  ....+.|+++|||++|+|+++|++|++|++||||++..    
T Consensus        14 ~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~   93 (178)
T d1e3ja1          14 RLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPC   93 (178)
T ss_dssp             EEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECC
T ss_pred             EEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEECccccc
Confidence            346778899999999999999 99999988776542  23456789999999999999999999999999998642    


Q ss_pred             -------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEe
Q 023465          211 -------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVT  263 (282)
Q Consensus       211 -------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~  263 (282)
                                               +|+||||+++|++.++++|+  ++++++++.+++.|||++++++++++||+|+|+
T Consensus        94 ~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~~~~~~~g~~VlVi  173 (178)
T d1e3ja1          94 RRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVM  173 (178)
T ss_dssp             SSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEE
T ss_pred             CCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEE
Confidence                                     38999999999999999999  678888899999999999999999999999999


Q ss_pred             CC
Q 023465          264 AA  265 (282)
Q Consensus       264 ga  265 (282)
                      |+
T Consensus       174 g~  175 (178)
T d1e3ja1         174 IS  175 (178)
T ss_dssp             EE
T ss_pred             cc
Confidence            86

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.1e-27  Score=191.64  Aligned_cols=137  Identities=23%  Similarity=0.240  Sum_probs=115.2

Q ss_pred             hccCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCC
Q 023465          126 RSSGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK  201 (282)
Q Consensus       126 ~~~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~  201 (282)
                      ++|++..++....+   .++|.|.|+++||||||++ ++|.+|.+.+.|.+.....+|+++|||++|+|+++|++|++|+
T Consensus         4 ~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~   83 (175)
T d1llua1           4 QTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVK   83 (175)
T ss_dssp             SEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             hhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccc
Confidence            34445555444333   5677899999999999999 9999999999988766678999999999999999999999999


Q ss_pred             CCCeeEEcc-----------------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHH
Q 023465          202 VGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALE  250 (282)
Q Consensus       202 ~Gd~V~~~~-----------------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~  250 (282)
                      +||||....                             +|+||||+++++++++++|+  ++..++++.+++.|+++.++
T Consensus        84 ~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~~  163 (175)
T d1llua1          84 EGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMR  163 (175)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHHH
T ss_pred             cCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHHH
Confidence            999998641                             27999999999999999999  56667778899999999886


Q ss_pred             HhCCCCCCEEEEe
Q 023465          251 QAGPASGKKVLVT  263 (282)
Q Consensus       251 ~~~~~~g~~vli~  263 (282)
                      .. ..+|++|||.
T Consensus       164 ~g-~~~G~~VLVl  175 (175)
T d1llua1         164 AG-QIEGRIVLEM  175 (175)
T ss_dssp             TT-CCSSEEEEEC
T ss_pred             hC-CCCCCEEEeC
Confidence            54 4579999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=2.7e-27  Score=188.52  Aligned_cols=122  Identities=20%  Similarity=0.327  Sum_probs=106.7

Q ss_pred             ccccCCCC-CCCcEEEEEEc-cccccccccccCCCC--CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          140 LNLNVQLP-ESFEKLLWIYG-QVNFSSGRYFSDGND--IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       140 ~~~~~p~~-~~~~vlv~v~~-~~~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      .+++.|++ +++||||||.+ ++|.+|.+.+.|.+.  ....+|+++|||++|+|+++|++|++|++||||++.+     
T Consensus        15 ~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg   94 (171)
T d1h2ba1          15 EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDG   94 (171)
T ss_dssp             ECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCS
T ss_pred             EEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEEEEcCccCCC
Confidence            45667775 68999999999 999999988777542  2346899999999999999999999999999998742     


Q ss_pred             -----------------------CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          211 -----------------------FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       211 -----------------------~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                                             +|+||||+++|++.++++|+  +++.++++++++.|||++++++.+ .|++|||
T Consensus        95 ~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~~~~~-~G~~VlI  170 (171)
T d1h2ba1          95 TCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEV-LGRAVLI  170 (171)
T ss_dssp             CSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHHTTCC-SSEEEEE
T ss_pred             CcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHHhcCC-CCCEEEe
Confidence                                   38999999999999999999  566688899999999999988887 8999998

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1e-26  Score=180.66  Aligned_cols=123  Identities=17%  Similarity=0.218  Sum_probs=107.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc--cCCccc
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--TFGSYA  215 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--~~G~~a  215 (282)
                      ..+++.|.|+++||||||++ ++|+.|.+...|.+. ...+|.++|||++|+|+++|++|++|++||||+..  ..|+|+
T Consensus        17 ~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~a   95 (147)
T d1qora1          17 AVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYS   95 (147)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSB
T ss_pred             EEEecCCCCCCCEEEEEEEEecccceeeeeecCCCC-CCcceeeeccccccceeeeeeecccccccceeeeeccccccce
Confidence            35677889999999999999 999999999888754 45789999999999999999999999999999764  369999


Q ss_pred             cEEeecCCCeeeCCC--ChH--HHHHhhhHHHHHHHHHHHhCCCCCCEEEE
Q 023465          216 EFTMVPSKHILPVAR--PDP--EVVAMLTSGLTASIALEQAGPASGKKVLV  262 (282)
Q Consensus       216 e~~~v~~~~~~~~p~--~~~--~~a~l~~~~~ta~~~l~~~~~~~g~~vli  262 (282)
                      ||++++++.++++|+  +++  ++++++...+|+++++.+.++++||+|||
T Consensus        96 e~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1          96 SVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             SEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             eEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            999999999999998  444  44556778888999887788999999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=8.2e-27  Score=185.79  Aligned_cols=124  Identities=21%  Similarity=0.219  Sum_probs=105.7

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..+++.|.|+++||||||++ ++|.+|.+...+.+.....+|+++|||++|+|+++|++++++++||||.+..       
T Consensus        15 i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~   94 (171)
T d1rjwa1          15 IKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGH   94 (171)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSC
T ss_pred             EEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceeeeEEeeccccccccc
Confidence            35677899999999999999 9999999888776666778899999999999999999999999999998632       


Q ss_pred             ----------------------CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC
Q 023465          211 ----------------------FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  264 (282)
Q Consensus       211 ----------------------~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g  264 (282)
                                            +|+||||+++|+++++++|+ .+.++|++ .+..++++.+.++.+ +|++|||.|
T Consensus        95 ~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~~~~~~~~~~~~~~~-~G~tVlViG  169 (171)
T d1rjwa1          95 CDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-EKINEVFDRMLKGQI-NGRVVLTLE  169 (171)
T ss_dssp             SHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-GGHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             cccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHH-HHHHHHHHHHHhcCC-CCCEEEEeC
Confidence                                  28999999999999999999 33455555 456788888766655 599999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=6.4e-27  Score=190.76  Aligned_cols=134  Identities=15%  Similarity=0.177  Sum_probs=114.9

Q ss_pred             CCccccCCCC---CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCC
Q 023465          129 GSMKRSSSQV---PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT  204 (282)
Q Consensus       129 ~~~~~~~~~~---~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd  204 (282)
                      +++++.....   ..+++.|+|+++||||||++ ++|.+|.+.+.+.. .+..+|.++|||++|+|+++|+++++|++||
T Consensus        10 kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~-~~~~~p~i~GhE~~G~v~~vG~~v~~~~~Gd   88 (199)
T d1cdoa1          10 KAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK-HKDGFPVVLGHEGAGIVESVGPGVTEFQPGE   88 (199)
T ss_dssp             EEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC-CTTSCSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             EEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcc-cccccccccccccceEEEEEcCCCceecCCC
Confidence            3445444444   35677899999999999999 99999999888753 3567899999999999999999999999999


Q ss_pred             eeEEcc-------------------------------------------------CCccccEEeecCCCeeeCCC--ChH
Q 023465          205 PAAIMT-------------------------------------------------FGSYAEFTMVPSKHILPVAR--PDP  233 (282)
Q Consensus       205 ~V~~~~-------------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~~  233 (282)
                      ||++..                                                 .|+||||++++++.++++|+  +++
T Consensus        89 rV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~  168 (199)
T d1cdoa1          89 KVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLD  168 (199)
T ss_dssp             EEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSCCG
T ss_pred             EEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCCCHH
Confidence            998751                                                 28999999999999999999  678


Q ss_pred             HHHHhhhHHHHHHHHHHH-hCCCCCCEEEEe
Q 023465          234 EVVAMLTSGLTASIALEQ-AGPASGKKVLVT  263 (282)
Q Consensus       234 ~~a~l~~~~~ta~~~l~~-~~~~~g~~vli~  263 (282)
                      ++|++.+++.|++++++. ...+.|++|||.
T Consensus       169 ~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         169 EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            899999999999999965 455889999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=2.1e-26  Score=186.27  Aligned_cols=122  Identities=16%  Similarity=0.155  Sum_probs=103.1

Q ss_pred             cccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCC-CCCCCCCeeEEcc--------
Q 023465          141 NLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV-NNVKVGTPAAIMT--------  210 (282)
Q Consensus       141 ~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~--------  210 (282)
                      +++++.++++||||||.+ ++|.+|++.+.+.+. ..++|+++|||++|+|+++|+++ +.+++||||....        
T Consensus        25 ~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c  103 (192)
T d1piwa1          25 KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLEC  103 (192)
T ss_dssp             EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCS
T ss_pred             eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCcccccccchhhcccccccccCCCCeeeEeeeccCCCCc
Confidence            344555799999999999 999999998887643 46789999999999999999988 6799999996421        


Q ss_pred             ----------------------------CCccccEEeecCCCeeeCCC-ChHHHHHhhhH-HHHHHHHHHHhCCCCCCEE
Q 023465          211 ----------------------------FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTS-GLTASIALEQAGPASGKKV  260 (282)
Q Consensus       211 ----------------------------~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~-~~ta~~~l~~~~~~~g~~v  260 (282)
                                                  +|+||||+++|+++++++|+ .+.+.|++.++ +.|||++++++++++||+|
T Consensus       104 ~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l~~~~vk~g~~V  183 (192)
T d1piwa1         104 DRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTL  183 (192)
T ss_dssp             HHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHHHHTCCSSEEEE
T ss_pred             hhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence                                        38999999999999999999 33345667766 6799999999999999999


Q ss_pred             EEe
Q 023465          261 LVT  263 (282)
Q Consensus       261 li~  263 (282)
                      ||.
T Consensus       184 vv~  186 (192)
T d1piwa1         184 VGY  186 (192)
T ss_dssp             ECC
T ss_pred             EEE
Confidence            986

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.6e-26  Score=180.41  Aligned_cols=123  Identities=15%  Similarity=0.272  Sum_probs=107.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------  210 (282)
                      ..++++|+|++|||||||++ ++|++|++...+.++.....|+++|||++|+|++  +.+++|++||+|+...       
T Consensus        20 i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~~~~~   97 (152)
T d1xa0a1          20 VQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTH   97 (152)
T ss_dssp             EEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEESTTBTTTB
T ss_pred             EEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccccCCEEEEecCcccccc
Confidence            35788899999999999999 9999999988887777778999999999999999  5678999999998763       


Q ss_pred             CCccccEEeecCCCeeeCCCC-hHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEeC
Q 023465          211 FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTA  264 (282)
Q Consensus       211 ~G~~ae~~~v~~~~~~~~p~~-~~~~a~l~~~~~ta~~~l-~~~~~~~g~~vli~g  264 (282)
                      +|+||||+++|++.++++|++ +.++|+++++++||+.++ .+..++ |++|||.|
T Consensus        98 ~G~~aEy~~v~~~~~~~iP~~l~~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          98 FGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CCSSBSEEEECGGGCEECCTTHHHHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCcceeeeehhhccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            499999999999999999993 457788889999998888 556654 99999976

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.1e-26  Score=184.63  Aligned_cols=125  Identities=24%  Similarity=0.248  Sum_probs=104.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCC--CCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      ..++++|+|+++||||||++ ++|.+|.+.+.+..  ....++|+++|||++|+|+++|+++++|++||||++.+     
T Consensus        21 l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg  100 (185)
T d1pl8a1          21 LENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRE  100 (185)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSS
T ss_pred             EEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeecccccceecceeccc
Confidence            45778899999999999999 99999998876542  23457899999999999999999999999999998642     


Q ss_pred             ------------------------CCccccEEeecCCCeeeCCC-ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          211 ------------------------FGSYAEFTMVPSKHILPVAR-PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       211 ------------------------~G~~ae~~~v~~~~~~~~p~-~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                                              +|+|+||+++++++++++|+ .+.+.++ .+++.+|+++++++++++|++||| |+
T Consensus       101 ~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa-~~pl~~a~~a~~~~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         101 NDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTH-RFPLEKALEAFETFKKGLGLKIML-KC  178 (185)
T ss_dssp             CCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEE-EEEGGGHHHHHHHHHTTCCSEEEE-EC
T ss_pred             cchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHH-HHHHHHHHHHHHHhCCCCCCEEEE-Ee
Confidence                                    37899999999999999999 3333333 356677888888888999999999 54

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=4.8e-26  Score=185.08  Aligned_cols=135  Identities=19%  Similarity=0.217  Sum_probs=116.3

Q ss_pred             cCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCC
Q 023465          128 SGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG  203 (282)
Q Consensus       128 ~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  203 (282)
                      ++++++....++   .++|+|+|+++||||||++ ++|.+|.+.+.|.+ ....+|+++|||++|+|+++|++|+++++|
T Consensus         7 ~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~-~~~~~p~v~GhE~~G~V~~vG~~V~~~~~G   85 (197)
T d2fzwa1           7 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD-PEGCFPVILGHLGAGIVESVGEGVTKLKAG   85 (197)
T ss_dssp             EEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCC-TTCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             EEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCc-ccccccccCCcceeeEEEeecCCceecCCC
Confidence            566666666555   4667899999999999999 99999999998864 346789999999999999999999999999


Q ss_pred             CeeEEcc-------------------------------------------------CCccccEEeecCCCeeeCCC--Ch
Q 023465          204 TPAAIMT-------------------------------------------------FGSYAEFTMVPSKHILPVAR--PD  232 (282)
Q Consensus       204 d~V~~~~-------------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~  232 (282)
                      |||++..                                                 .|+||||+++|+..++++|+  ++
T Consensus        86 drV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~  165 (197)
T d2fzwa1          86 DTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKV  165 (197)
T ss_dssp             CEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCS
T ss_pred             CEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCCCCH
Confidence            9998741                                                 17999999999999999999  67


Q ss_pred             HHHHHhhhHHHHHHHHHHHhCC-CCCCEEEEe
Q 023465          233 PEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  263 (282)
Q Consensus       233 ~~~a~l~~~~~ta~~~l~~~~~-~~g~~vli~  263 (282)
                      ++++++.+++.|++.++++.+. +.+++|||+
T Consensus       166 ~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         166 DEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             GGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            8888899999999999965544 789999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.92  E-value=8.6e-26  Score=184.55  Aligned_cols=134  Identities=17%  Similarity=0.199  Sum_probs=112.9

Q ss_pred             ccCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          127 SSGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      +++++++.....|   .++|.|+|+++||||||++ ++|.+|.+.+.|.+  +..+|+++|||++|+|+++|++|++|++
T Consensus         8 ~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~--~~~~P~v~GHE~~G~V~~vG~~V~~~~~   85 (202)
T d1e3ia1           8 KCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK--KALFPVVLGHECAGIVESVGPGVTNFKP   85 (202)
T ss_dssp             EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTS--CCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             EEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeec--ccccccccccccceEEeeecCCceeccC
Confidence            4455666555444   5677899999999999999 99999999988764  4578999999999999999999999999


Q ss_pred             CCeeEEcc-----------------------------------------------------CCccccEEeecCCCeeeCC
Q 023465          203 GTPAAIMT-----------------------------------------------------FGSYAEFTMVPSKHILPVA  229 (282)
Q Consensus       203 Gd~V~~~~-----------------------------------------------------~G~~ae~~~v~~~~~~~~p  229 (282)
                      ||||++..                                                     .|+||||+++|+..++++|
T Consensus        86 GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~lP  165 (202)
T d1e3ia1          86 GDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVD  165 (202)
T ss_dssp             TCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEECC
Confidence            99998741                                                     1899999999999999999


Q ss_pred             C--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC
Q 023465          230 R--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  264 (282)
Q Consensus       230 ~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g  264 (282)
                      +  +++.++++.+++.+++++++..  ++||+|.|..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~a~~~~--k~G~~V~vi~  200 (202)
T d1e3ia1         166 DEFDLDLLVTHALPFESINDAIDLM--KEGKSIRTIL  200 (202)
T ss_dssp             TTSCGGGGEEEEEEGGGHHHHHHHH--HTTCCSEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--CCCCEEEEEE
Confidence            9  6677778888888988888654  6899998864

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.91  E-value=3.4e-25  Score=177.25  Aligned_cols=123  Identities=27%  Similarity=0.344  Sum_probs=103.8

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCC-------CCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGND-------IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT  210 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~-------~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  210 (282)
                      ..+++.|+|+++||||||++ ++|.+|.+++.|.+.       ...++|+|+|||++|+|+++|+++++|++||||++..
T Consensus        15 i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~   94 (177)
T d1jvba1          15 LQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNP   94 (177)
T ss_dssp             EEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECC
T ss_pred             EEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccCccccccCceEeeee
Confidence            35777899999999999999 999999999887532       2347899999999999999999999999999998752


Q ss_pred             ----------------------------CCccccEEeecCCC-eeeCCC-ChHHHHHh-hhHHHHHHHHHHHhCCCCCCE
Q 023465          211 ----------------------------FGSYAEFTMVPSKH-ILPVAR-PDPEVVAM-LTSGLTASIALEQAGPASGKK  259 (282)
Q Consensus       211 ----------------------------~G~~ae~~~v~~~~-~~~~p~-~~~~~a~l-~~~~~ta~~~l~~~~~~~g~~  259 (282)
                                                  +|+||||+++|+.. ++++|+ ++.+++++ .+++.+++++++.+++ .|++
T Consensus        95 ~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~~-~G~~  173 (177)
T d1jvba1          95 WQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA-IGRQ  173 (177)
T ss_dssp             EECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHHHHTTCC-CSEE
T ss_pred             ccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHHHHhhcc-cCCc
Confidence                                        28999999998654 677788 55555555 5799999999988887 6999


Q ss_pred             EEE
Q 023465          260 VLV  262 (282)
Q Consensus       260 vli  262 (282)
                      |||
T Consensus       174 VlI  176 (177)
T d1jvba1         174 VLI  176 (177)
T ss_dssp             EEE
T ss_pred             eEC
Confidence            998

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.1e-27  Score=195.14  Aligned_cols=129  Identities=18%  Similarity=0.232  Sum_probs=109.7

Q ss_pred             CCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------------
Q 023465          145 QLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------------  210 (282)
Q Consensus       145 p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------  210 (282)
                      |.|+++||||||++ ++|.+|.+++.|.+  +..+|+++|||++|+|+++|++|++|++||||.+.+             
T Consensus        28 ~~p~~~eVlVkv~a~giC~sDl~~~~G~~--~~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g  105 (201)
T d1kola1          28 GKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEM  105 (201)
T ss_dssp             SCBCSSCEEEEEEEEECCHHHHHHHTTCS--CCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTT
T ss_pred             CCCCCCEEEEEEEEEEEcchhhhhhcCCc--ccccceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCC
Confidence            34578999999999 99999999988764  457899999999999999999999999999997531             


Q ss_pred             -------------------------CCccccEEeecCC--CeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEE
Q 023465          211 -------------------------FGSYAEFTMVPSK--HILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVL  261 (282)
Q Consensus       211 -------------------------~G~~ae~~~v~~~--~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vl  261 (282)
                                               +|+||||+++|..  +++++||  ++.+++++.+++.++++++.++..+.|+   
T Consensus       106 ~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~~~~~~~~g~---  182 (201)
T d1kola1         106 HTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYGE---  182 (201)
T ss_dssp             CGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTEEEECGGGHHHHHHH---
T ss_pred             CcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHHHHHHHHhCCCCCeE---
Confidence                                     2899999999863  6899998  5667788889999999988666655564   


Q ss_pred             EeCCCchHHHHHHHHHHHh
Q 023465          262 VTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       262 i~ga~g~vG~~a~q~a~~~  280 (282)
                       +|+ |++|++++|+||++
T Consensus       183 -~g~-G~vG~~~i~~ak~~  199 (201)
T d1kola1         183 -FDA-GVPKKFVIDPHKTF  199 (201)
T ss_dssp             -HHH-TCSCEEEECTTCSS
T ss_pred             -Eee-CHHHHHHHHHHHHc
Confidence             476 99999999999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=2.3e-25  Score=169.10  Aligned_cols=113  Identities=27%  Similarity=0.280  Sum_probs=100.4

Q ss_pred             CccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-CCcccc
Q 023465          139 PLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAE  216 (282)
Q Consensus       139 ~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~G~~ae  216 (282)
                      ..+++.|.|+++|||||+++ ++|++|.+...|.++....+|+++|||++|+|           +||||++.. +|+|+|
T Consensus        15 ~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vGd~V~~~~~~G~~ae   83 (131)
T d1iz0a1          15 LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EGRRYAALVPQGGLAE   83 (131)
T ss_dssp             EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TTEEEEEECSSCCSBS
T ss_pred             EEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------ccceEEEEeccCccce
Confidence            35677899999999999999 99999999998887777789999999999999           399998764 699999


Q ss_pred             EEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEe
Q 023465          217 FTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVT  263 (282)
Q Consensus       217 ~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~  263 (282)
                      |++++++.++++|+  +++++|++++++.|||++|.+.+ +.|++||+.
T Consensus        84 y~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g-~~g~tvl~l  131 (131)
T d1iz0a1          84 RVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVRL  131 (131)
T ss_dssp             EEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT-CCBEEEEEC
T ss_pred             eeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc-cCCCEEEEC
Confidence            99999999999999  78999999999999999994433 569999873

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=1.3e-24  Score=176.02  Aligned_cols=130  Identities=18%  Similarity=0.182  Sum_probs=104.5

Q ss_pred             ccCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          127 SSGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      ++.+++......+   .+++.|+|+++||||||++ ++|.+|.+++.+.+  +.++|+++|||++|+|+++|++|++|++
T Consensus         3 ~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~--~~~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           3 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY--PVPLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS--CCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             eeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcc--cccCCcccccceEEEeeecCccceeEcc
Confidence            3445555555444   4567899999999999999 99999999988764  4578999999999999999999999999


Q ss_pred             CCeeEEcc--------------------------------------------------CCccccEEeecCCCeeeCCCCh
Q 023465          203 GTPAAIMT--------------------------------------------------FGSYAEFTMVPSKHILPVARPD  232 (282)
Q Consensus       203 Gd~V~~~~--------------------------------------------------~G~~ae~~~v~~~~~~~~p~~~  232 (282)
                      ||||+...                                                  .|+|+||+++++..++++|++ 
T Consensus        81 GDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~-  159 (194)
T d1f8fa1          81 GDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD-  159 (194)
T ss_dssp             TCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT-
T ss_pred             CceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC-
Confidence            99997521                                                  168999999999999999972 


Q ss_pred             HHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          233 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       233 ~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                                           +..++.+++.|+ |++|++++|+|+.+.
T Consensus       160 ---------------------i~~~~~~~i~g~-g~~g~~aiq~a~~~g  186 (194)
T d1f8fa1         160 ---------------------FPFDQLVKFYAF-DEINQAAIDSRKGIT  186 (194)
T ss_dssp             ---------------------CCGGGGEEEEEG-GGHHHHHHHHHHTSC
T ss_pred             ---------------------CCcccEEEEeCc-HHHHHHHHHHHHHcC
Confidence                                 112334555565 999999999999764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=2.1e-27  Score=189.92  Aligned_cols=137  Identities=15%  Similarity=0.178  Sum_probs=116.7

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCC---------CCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEc
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDI---------GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM  209 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~---------~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  209 (282)
                      .+++.|.|+++||||||++ ++|++|.++..|.+..         ....|.++|+|++|+|+++|.++.+++.||+|...
T Consensus        24 ~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v~~~  103 (175)
T d1gu7a1          24 FEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPS  103 (175)
T ss_dssp             EEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEES
T ss_pred             EECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccccccccccccccccccceecc
Confidence            4667788899999999999 9999999887765321         13567899999999999999999999999999875


Q ss_pred             c--CCccccEEeecCCCeeeCCCChHHHHHhhhHHHHHHHHHH--HhCCCCCCEEEEeC-CCchHHHHHHHH
Q 023465          210 T--FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALE--QAGPASGKKVLVTA-AAGGTGQFAVQV  276 (282)
Q Consensus       210 ~--~G~~ae~~~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l~--~~~~~~g~~vli~g-a~g~vG~~a~q~  276 (282)
                      .  .|+|+||+++|+++++++|++..+.+++++..+|||+++.  ..+++|||+|||+| |+|+||++++|+
T Consensus       104 ~~~~g~~aey~~v~~~~~~~iP~~~~~~~a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         104 HVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             SSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             ccccccccceeeehhhhccCCCccchhhhhccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            4  5999999999999999999966677777788889999883  45789999999998 458899998873

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.5e-24  Score=173.95  Aligned_cols=118  Identities=19%  Similarity=0.170  Sum_probs=100.3

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCC-----CCCCCCeeEEcc---
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-----NVKVGTPAAIMT---  210 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-----~~~~Gd~V~~~~---  210 (282)
                      .++++|.|+++||||||.+ ++|.+|.+.+.|.+. ..++|+++|||++|+|+++|++|+     ++++||||++.+   
T Consensus        20 ~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~-~~~~P~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~   98 (184)
T d1vj0a1          20 KEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGIT   98 (184)
T ss_dssp             EEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEEC
T ss_pred             EEeeCCCCCCCEEEEEEEEECCCCCchhheeccCC-ccccccccceeeeeeeeEEeccccccccccccceeeeEeccccc
Confidence            4667899999999999999 999999999887643 357899999999999999999986     468999998631   


Q ss_pred             ----------------------------------CCccccEEeec-CCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhC
Q 023465          211 ----------------------------------FGSYAEFTMVP-SKHILPVAR--PDPEVVAMLTSGLTASIALEQAG  253 (282)
Q Consensus       211 ----------------------------------~G~~ae~~~v~-~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~  253 (282)
                                                        +|+||||++++ ++.++++|+  +++      .++.+|++++++++
T Consensus        99 Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~------~pl~~A~~a~~~~~  172 (184)
T d1vj0a1          99 CGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHR------LPLKEANKALELME  172 (184)
T ss_dssp             CSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEE------EEGGGHHHHHHHHH
T ss_pred             cccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHH------HHHHHHHHHHHHhC
Confidence                                              48999999996 578999999  332      35667899999999


Q ss_pred             CCCCCEEEEeC
Q 023465          254 PASGKKVLVTA  264 (282)
Q Consensus       254 ~~~g~~vli~g  264 (282)
                      +++||+|||+-
T Consensus       173 ~~~G~~VlI~~  183 (184)
T d1vj0a1         173 SREALKVILYP  183 (184)
T ss_dssp             HTSCSCEEEEC
T ss_pred             CCcCCEEEEee
Confidence            99999999973

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.1e-24  Score=182.95  Aligned_cols=108  Identities=25%  Similarity=0.351  Sum_probs=97.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~   78 (282)
                      ++|+|||+||.++..+.++.++|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....++..+      +++|
T Consensus       128 ~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R  207 (243)
T d1q7ba_         128 RHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGR  207 (243)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSS
T ss_pred             CCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCC
Confidence            469999999999999999999999999999999999999 999999999999999999998665443222      6788


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +.+|||+|+.++||+|+++.+.||..+..||++.+
T Consensus       208 ~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         208 LGGAQEIANAVAFLASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeEe
Confidence            89999999999999999999999999999999754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=1.4e-24  Score=183.06  Aligned_cols=106  Identities=29%  Similarity=0.359  Sum_probs=92.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~   78 (282)
                      ++|+|||+||.++..+.++..+|++||+|+++|||+|+. ++++|||||+|+||+++|+|.....++..+      +++|
T Consensus       137 ~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R  216 (251)
T d2c07a1         137 RYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGR  216 (251)
T ss_dssp             TCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSS
T ss_pred             CCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCC
Confidence            469999999999999999999999999999999999999 999999999999999999998765544332      6788


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +.+|||++++++||+|+++.+.||..+..||++
T Consensus       217 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         217 MGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence            999999999999999999999999999999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=3.1e-24  Score=179.37  Aligned_cols=108  Identities=25%  Similarity=0.319  Sum_probs=92.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhC
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMG   77 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~   77 (282)
                      +++|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....++..+      +++
T Consensus       122 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~  201 (237)
T d1uzma1         122 NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK  201 (237)
T ss_dssp             TTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTC
T ss_pred             cCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCC
Confidence            3468999999999999999999999999999999999999 999999999999999999998755443322      678


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      |+.+|||+++.++||+|+++++.||..+..||++.
T Consensus       202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~~  236 (237)
T d1uzma1         202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG  236 (237)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCCC
Confidence            89999999999999999999999999999999964

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.89  E-value=5.7e-24  Score=180.20  Aligned_cols=117  Identities=27%  Similarity=0.295  Sum_probs=102.2

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHHH----
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKFI----   73 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~~----   73 (282)
                      |++++.+++|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....  ++..    
T Consensus       131 m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~  210 (261)
T d1geea_         131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE  210 (261)
T ss_dssp             HHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH
T ss_pred             hccccccccccccccchhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHH
Confidence            34555556799999999999999999999999999999999999 9999999999999999999975432  1111    


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTS  117 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~p  117 (282)
                        .+++|+.+|||+|++++||+|+++.+.||..+..||++..+|.-
T Consensus       211 ~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         211 SMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             hcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeCCCCC
Confidence              16788999999999999999999999999999999999887754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=1.9e-24  Score=181.53  Aligned_cols=111  Identities=25%  Similarity=0.336  Sum_probs=98.6

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh-----
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID-----   74 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~-----   74 (282)
                      |+++ ++|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++..+     
T Consensus       125 m~~~-~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~  203 (244)
T d1edoa_         125 MMKK-RKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGT  203 (244)
T ss_dssp             HHHH-TCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTS
T ss_pred             HHHc-CCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhc
Confidence            3444 469999999999999999999999999999999999999 999999999999999999998765544332     


Q ss_pred             -hhCCCCCHHHHHHHHHHhh-cCCCCceEEEEEecCCccc
Q 023465           75 -LMGGFVPMEMVVKGAFELI-TDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 -~~~~~~~~~~~a~~~~~l~-~~~~~~~~~~~~~~~g~~~  112 (282)
                       +++|+.+|||+++.++||+ |+++.+.||..+..||++.
T Consensus       204 ~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         204 IPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence             6788999999999999996 8899999999999999863

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=5.8e-24  Score=169.96  Aligned_cols=117  Identities=21%  Similarity=0.221  Sum_probs=97.4

Q ss_pred             CCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-----
Q 023465          137 QVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-----  210 (282)
Q Consensus       137 ~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----  210 (282)
                      .+..+++.|+|++|||||||++ ++|.+|.+++.+.+. ...+|+++|||++|+|+++|++|+++++||||.+.+     
T Consensus        13 l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~-~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~c   91 (179)
T d1uufa1          13 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSC   91 (179)
T ss_dssp             CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECC
T ss_pred             CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeec-cccccccccccccccchhhccccccCCCCCEEEEccccccc
Confidence            4456788999999999999999 999999998887643 457899999999999999999999999999997531     


Q ss_pred             --------------------------------CCccccEEeecCCCeeeCCCChHHHHHhhhHHHHHHHHHHHhCCC
Q 023465          211 --------------------------------FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPA  255 (282)
Q Consensus       211 --------------------------------~G~~ae~~~v~~~~~~~~p~~~~~~a~l~~~~~ta~~~l~~~~~~  255 (282)
                                                      +|+||||+++|+++++++|++... +++..++.++++++.++.++
T Consensus        92 g~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~-~~~a~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1          92 KHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIE-MIRADQINEAYERMLRGDVK  167 (179)
T ss_dssp             SSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEE-EECGGGHHHHHHHHHTTCSS
T ss_pred             CccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcC-hhHhchhHHHHHHHHHhCcc
Confidence                                            289999999999999999973222 23345778899999877763

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.89  E-value=5.5e-24  Score=179.95  Aligned_cols=112  Identities=28%  Similarity=0.205  Sum_probs=98.1

Q ss_pred             ccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH---------
Q 023465            2 QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK---------   71 (282)
Q Consensus         2 ~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~---------   71 (282)
                      ++++++|+|||+||.++..+.++.+.|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.......         
T Consensus       126 ~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~  205 (256)
T d1k2wa_         126 IAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPR  205 (256)
T ss_dssp             HHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCT
T ss_pred             HHhccCCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCCh
Confidence            3445569999999999999999999999999999999999999 999999999999999999997543221         


Q ss_pred             ------H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 ------F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ------~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                            +  ..+++|+.+|+|+++.++||+|+++.+.||..+..||++.+
T Consensus       206 ~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         206 GEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             THHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence                  1  11678999999999999999999999999999999999643

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=6.6e-24  Score=172.65  Aligned_cols=133  Identities=16%  Similarity=0.211  Sum_probs=104.4

Q ss_pred             cCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCC
Q 023465          128 SGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG  203 (282)
Q Consensus       128 ~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  203 (282)
                      ++++.+....++   .+++.|.|+++||||||.+ ++|.+|++.+.|.+  +.++|+++|||++|+|+++|++|+++++|
T Consensus         9 ~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~--~~~~P~i~GHE~~G~Vv~vG~~v~~~~vG   86 (198)
T d2jhfa1           9 CKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL--VTPLPVIAGHEAAGIVESIGEGVTTVRPG   86 (198)
T ss_dssp             EEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSS--CCCSSBCCCCSEEEEEEEECTTCCSCCTT
T ss_pred             EEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCc--ccccceecccceeEEEEecCccccCcCCC
Confidence            455555555544   5667899999999999999 99999999998864  45789999999999999999999999999


Q ss_pred             CeeEEcc-------------------------------------------------CCccccEEeecCCCeeeCCC--Ch
Q 023465          204 TPAAIMT-------------------------------------------------FGSYAEFTMVPSKHILPVAR--PD  232 (282)
Q Consensus       204 d~V~~~~-------------------------------------------------~G~~ae~~~v~~~~~~~~p~--~~  232 (282)
                      |||++..                                                 .|+||||+++|+.+++++|+  ++
T Consensus        87 drV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~~~  166 (198)
T d2jhfa1          87 DKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFAL  166 (198)
T ss_dssp             CEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTSCC
T ss_pred             CEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCCCH
Confidence            9998742                                                 17999999999999999999  45


Q ss_pred             HHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeC
Q 023465          233 PEVVAMLTSGLTASIALEQAGPASGKKVLVTA  264 (282)
Q Consensus       233 ~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~g  264 (282)
                      +.+++...++.+...+.  ..+++||+|+|..
T Consensus       167 e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi~  196 (198)
T d2jhfa1         167 DPLITHVLPFEKINEGF--DLLRSGESIRTIL  196 (198)
T ss_dssp             GGGEEEEEEGGGHHHHH--HHHHTTCCSEEEE
T ss_pred             HHHHHHHHHHHhhhhCC--ceeeCCCEEEEEE
Confidence            44444444444333332  2257899998863

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=5.4e-24  Score=178.53  Aligned_cols=108  Identities=27%  Similarity=0.214  Sum_probs=97.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH-HhhhCCCCCH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF-IDLMGGFVPM   82 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~-~~~~~~~~~~   82 (282)
                      +++|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....++. ..+++|+.+|
T Consensus       129 ~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p  208 (244)
T d1nffa_         129 AGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEP  208 (244)
T ss_dssp             HTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCH
T ss_pred             cCcceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCH
Confidence            3469999999999999999999999999999999999999 9999999999999999999987654433 2367889999


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           83 EMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      ||+++.++||+|+++.+.||..+..||++.
T Consensus       209 ~diA~~v~fL~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         209 VEVSNLVVYLASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence            999999999999999999999999999964

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=9.3e-24  Score=178.12  Aligned_cols=109  Identities=13%  Similarity=0.138  Sum_probs=96.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhh--------hHHH----
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKV--------ASKF----   72 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~--------~~~~----   72 (282)
                      ++|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|....        .++.    
T Consensus       122 ~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~  201 (252)
T d1zmta1         122 KSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHV  201 (252)
T ss_dssp             TCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHH
T ss_pred             ccceeecccccccccccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHH
Confidence            469999999999999999999999999999999999999 999999999999999999986432        1111    


Q ss_pred             --HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           73 --IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        73 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                        ..+++|+.+|||+|+.++||+|+++++.||..+..||++.+.
T Consensus       202 ~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         202 KKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             HHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCceeC
Confidence              126789999999999999999999999999999999997653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=8.8e-24  Score=177.72  Aligned_cols=107  Identities=21%  Similarity=0.224  Sum_probs=88.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH--------HHhhh
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK--------FIDLM   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~--------~~~~~   76 (282)
                      ++|+|||+||.++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|......+        ...++
T Consensus       130 ~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l  209 (247)
T d2ew8a1         130 GWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAI  209 (247)
T ss_dssp             TCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSS
T ss_pred             CCCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccC
Confidence            469999999999999999999999999999999999999 999999999999999999997543211        11256


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +|+.+|||+++.++||+|+.+.+.||..+..||++.
T Consensus       210 ~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         210 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            788999999999999999999999999999999964

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.88  E-value=4.9e-26  Score=181.72  Aligned_cols=125  Identities=16%  Similarity=0.206  Sum_probs=94.9

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ...++|.|+|+++|||||+++ ++|.+|.+.+.+.. ...++|+++|||++|+|+++|++|++|++||||++.+      
T Consensus        13 ~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~-~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~   91 (177)
T d1jqba1          13 GWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGA-LGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWR   91 (177)
T ss_dssp             EEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCT-TCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSS
T ss_pred             EEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCC-CCCCCCccCcceeeEEeeecccccceecCCCcEEEeeeecccc
Confidence            345677899999999999999 99999987765442 3457899999999999999999999999999998631      


Q ss_pred             -------------------------CCccccEEeecC--CCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEE
Q 023465          211 -------------------------FGSYAEFTMVPS--KHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVL  261 (282)
Q Consensus       211 -------------------------~G~~ae~~~v~~--~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vl  261 (282)
                                               +|+||||+++|.  .+++++|+  ++.+++...   .++++.+       ++.||
T Consensus        92 c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~---~~~~~~~-------~~~vl  161 (177)
T d1jqba1          92 SLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV---YHGFDHI-------EEALL  161 (177)
T ss_dssp             SHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE---EESGGGH-------HHHHH
T ss_pred             ccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH---HHHHHHh-------cCceE
Confidence                                     289999999996  36899999  444433222   1222222       34477


Q ss_pred             EeCCCchHHHHHH
Q 023465          262 VTAAAGGTGQFAV  274 (282)
Q Consensus       262 i~ga~g~vG~~a~  274 (282)
                      |.|+ |++|++++
T Consensus       162 v~g~-gp~gl~aa  173 (177)
T d1jqba1         162 LMKD-KPKDLIKA  173 (177)
T ss_dssp             HHHH-CCTTCSEE
T ss_pred             EECC-CHHHhhee
Confidence            7777 77776554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=1.8e-23  Score=174.52  Aligned_cols=112  Identities=19%  Similarity=0.160  Sum_probs=99.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-HH------hhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-FI------DLM   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~~------~~~   76 (282)
                      ++.|+||+++|..+..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|.....++ ..      .++
T Consensus       115 ~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl  194 (234)
T d1o5ia_         115 KGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM  194 (234)
T ss_dssp             HTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT
T ss_pred             cccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC
Confidence            3469999999999999999999999999999999999999 999999999999999999997653221 11      267


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      +|..+|||+++.++||+|+++++.||..+..||++..+|.
T Consensus       195 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~p~  234 (234)
T d1o5ia_         195 RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKFPL  234 (234)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCCCC
T ss_pred             CCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccccCCC
Confidence            8899999999999999999999999999999999988773

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.88  E-value=1.7e-23  Score=177.35  Aligned_cols=107  Identities=30%  Similarity=0.304  Sum_probs=91.2

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-------------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-------------   71 (282)
                      +.|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.......             
T Consensus       133 ~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T d1x1ta1         133 GFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAA  212 (260)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             CCceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHH
Confidence            469999999999999999999999999999999999999 999999999999999999997543110             


Q ss_pred             -----HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           72 -----FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        72 -----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                           ...+++|+.+|+|+++.++||+|+.+.+.||..+..||++.
T Consensus       213 ~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         213 RELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             --CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence                 11267889999999999999999999999999999999963

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=2e-23  Score=176.43  Aligned_cols=111  Identities=25%  Similarity=0.219  Sum_probs=97.8

Q ss_pred             ccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHH--------
Q 023465            2 QAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKF--------   72 (282)
Q Consensus         2 ~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~--------   72 (282)
                      ++++++|+|+|+||.++..+.++.+.|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++.        
T Consensus       125 ~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  204 (255)
T d1gega_         125 KKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPL  204 (255)
T ss_dssp             HHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCT
T ss_pred             hhhccccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccc
Confidence            3445568999999999999999999999999999999999999 9999999999999999999976442211        


Q ss_pred             -------H--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 -------I--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 -------~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                             .  .+++|+.+|||+|+.++||+|+++++.||..+..||++.
T Consensus       205 ~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         205 GYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             THHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             hhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence                   1  157889999999999999999999999999999999974

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.88  E-value=2e-23  Score=176.61  Aligned_cols=108  Identities=31%  Similarity=0.428  Sum_probs=96.0

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----------HH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----------KF   72 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----------~~   72 (282)
                      ++.|+|||++|.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....+           +.
T Consensus       130 ~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~  209 (257)
T d2rhca1         130 RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEA  209 (257)
T ss_dssp             HTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHH
T ss_pred             cCCcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHH
Confidence            3458999999999999999999999999999999999999 99999999999999999999754321           11


Q ss_pred             H------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 I------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 ~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .      .+++|+.+|||+++.++||+|+++++.||..+..||++.
T Consensus       210 ~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         210 FDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence            1      157889999999999999999999999999999999963

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.8e-23  Score=175.51  Aligned_cols=110  Identities=26%  Similarity=0.397  Sum_probs=97.4

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H----HH--
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K----FI--   73 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~----~~--   73 (282)
                      +++++|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|......  +    ..  
T Consensus       124 ~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  203 (244)
T d1pr9a_         124 ARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR  203 (244)
T ss_dssp             HHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTT
T ss_pred             HhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhc
Confidence            445579999999999999999999999999999999999999 99999999999999999999754321  1    11  


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+++|+.+|||+|+.++||+|+.+++.||..+..||++.
T Consensus       204 ~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         204 IPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence            167889999999999999999999999999999999974

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.88  E-value=1.9e-23  Score=176.66  Aligned_cols=108  Identities=25%  Similarity=0.303  Sum_probs=95.7

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------HHH--
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------KFI--   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------~~~--   73 (282)
                      +++|+|||+||.++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|......        +..  
T Consensus       133 ~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~  212 (258)
T d1iy8a_         133 QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEE  212 (258)
T ss_dssp             HTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHH
T ss_pred             hcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHH
Confidence            3469999999999999999999999999999999999999 99999999999999999999754321        111  


Q ss_pred             ----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 ----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                          .+++|+.+|+|+|+.++||+|+++++.||..+..||++.
T Consensus       213 ~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         213 FIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence                157889999999999999999999999999999999963

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.87  E-value=2.7e-23  Score=175.93  Aligned_cols=109  Identities=17%  Similarity=0.197  Sum_probs=96.4

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH-----H----HH-
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS-----K----FI-   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~-----~----~~-   73 (282)
                      +++|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+|+|+|......     +    +. 
T Consensus       135 ~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  214 (259)
T d2ae2a_         135 SERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID  214 (259)
T ss_dssp             TSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH
T ss_pred             hcccccccccccccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHh
Confidence            4469999999999999999999999999999999999999 99999999999999999999754311     1    11 


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                       .+++|+.+|||+++.++||+|+++++.||..+..||++..
T Consensus       215 ~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         215 RCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             TSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEe
Confidence             2678999999999999999999999999999999999643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3.7e-23  Score=172.86  Aligned_cols=109  Identities=21%  Similarity=0.205  Sum_probs=94.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------h-h
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------L-M   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~-~   76 (282)
                      ++.|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|++.....++..+      + .
T Consensus       124 ~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  203 (241)
T d1uaya_         124 GQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFP  203 (241)
T ss_dssp             SCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSS
T ss_pred             cCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCC
Confidence            3469999999999999999999999999999999999999 999999999999999999998655433221      2 3


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +|..+|||+++.++||++  +.+.||..+..||++.+-|
T Consensus       204 ~R~g~pedvA~~v~fL~s--~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         204 PRLGRPEEYAALVLHILE--NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             CSCCCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCCC
T ss_pred             CCCcCHHHHHHHHHHHHh--CCCCCCCEEEECCcccCCC
Confidence            778899999999999998  3589999999999986544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.87  E-value=1.5e-23  Score=176.77  Aligned_cols=111  Identities=24%  Similarity=0.243  Sum_probs=97.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH------hhhCC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI------DLMGG   78 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~------~~~~~   78 (282)
                      ++|+|||+||.++..+.++.+.|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++..      .+++|
T Consensus       129 ~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R  208 (254)
T d1hdca_         129 GGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGR  208 (254)
T ss_dssp             TCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSS
T ss_pred             CCCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCC
Confidence            469999999999999999999999999999999999999 99999999999999999999865433221      25667


Q ss_pred             CC-CHHHHHHHHHHhhcCCCCceEEEEEecCCccccccC
Q 023465           79 FV-PMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT  116 (282)
Q Consensus        79 ~~-~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~  116 (282)
                      .. +|||++++++||+|+++++.||..+..||++..-|+
T Consensus       209 ~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~gp~  247 (254)
T d1hdca_         209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTGPT  247 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTSCC
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCccCCCC
Confidence            75 699999999999999999999999999999866554

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=2.3e-25  Score=175.71  Aligned_cols=130  Identities=15%  Similarity=0.201  Sum_probs=113.0

Q ss_pred             CCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc------
Q 023465          138 VPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------  210 (282)
Q Consensus       138 ~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------  210 (282)
                      ...+++.|++++|||||||++ ++|++|++...+.+.....+|+++|+|++|+|++  +.++++++||+|+...      
T Consensus        19 ~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~g~~   96 (162)
T d1tt7a1          19 HVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYELGVS   96 (162)
T ss_dssp             EEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCCTTCEEEEESTTBTTT
T ss_pred             EEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccccceeeEeeeccceec
Confidence            345677899999999999999 9999999988888776677899999999999999  5678999999998763      


Q ss_pred             -CCccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchH
Q 023465          211 -FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGT  269 (282)
Q Consensus       211 -~G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~v  269 (282)
                       +|+||||+++|++.++++|+  ++++||+++..++|||.++.......+++|||+|++|++
T Consensus        97 ~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1          97 RDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQGRV  158 (162)
T ss_dssp             BCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEE
T ss_pred             cccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCcceE
Confidence             49999999999999999999  899999999999999988744444566889999997764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.87  E-value=5.8e-23  Score=173.05  Aligned_cols=112  Identities=23%  Similarity=0.246  Sum_probs=96.7

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc---ccCCCcEEEEEeCCcccCcchhhhhHH--HH--
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP---YKRKGIRINVLCPEFVQTEMGLKVASK--FI--   73 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~---~~~~gI~v~~i~PG~v~T~~~~~~~~~--~~--   73 (282)
                      |++++.+|+|||+||.++..+.++...|++||+|+.+|+|+|+.   ++++|||||+|+||+++|+|.......  ..  
T Consensus       128 m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~  207 (251)
T d1zk4a1         128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ  207 (251)
T ss_dssp             HTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTS
T ss_pred             HHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHH
Confidence            45555557999999999999999999999999999999999985   568999999999999999998654321  11  


Q ss_pred             ---hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 ---DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ---~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                         .+++|+.+|||+++.++||+|+++.+.||..+..||++.
T Consensus       208 ~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         208 RTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence               167788999999999999999999999999999999963

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=2.6e-23  Score=174.22  Aligned_cols=109  Identities=29%  Similarity=0.392  Sum_probs=96.9

Q ss_pred             cCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------H
Q 023465            3 AAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------I   73 (282)
Q Consensus         3 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~   73 (282)
                      +++.+|+|||++|.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....  ++.      .
T Consensus       122 ~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  201 (242)
T d1cyda_         122 NRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER  201 (242)
T ss_dssp             HHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH
T ss_pred             hhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhc
Confidence            444569999999999999999999999999999999999999 9999999999999999999976432  111      1


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+++|+.+|||+++.++||+|+++++.||..+..||++
T Consensus       202 ~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         202 HPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence            26789999999999999999999999999999999986

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.1e-23  Score=175.08  Aligned_cols=107  Identities=21%  Similarity=0.167  Sum_probs=95.7

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-HHHH------hhhC
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-SKFI------DLMG   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-~~~~------~~~~   77 (282)
                      ++|+|||+||.++..+.++.++|++||+|+.+|+|+|+. ++++|||||+|+||+++|++..... ++..      .+++
T Consensus       137 ~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~  216 (255)
T d1fmca_         137 GGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR  216 (255)
T ss_dssp             TCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC
T ss_pred             cccccccccccchhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999999999 9999999999999999999875432 2211      1678


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      |..+|||+|++++||+|+.+.+.||..+..||++.
T Consensus       217 R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            89999999999999999999999999999999963

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=1.4e-23  Score=177.73  Aligned_cols=109  Identities=28%  Similarity=0.295  Sum_probs=76.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHH-H------Hhhh
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASK-F------IDLM   76 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-~------~~~~   76 (282)
                      +++|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++ .      ..++
T Consensus       135 ~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl  214 (259)
T d1xq1a_         135 SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL  214 (259)
T ss_dssp             HSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------
T ss_pred             cccccccccccccccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC
Confidence            3469999999999999999999999999999999999999 999999999999999999998654322 1      1267


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +|..+|||+|++++||+|+++.+.||..+..||++..
T Consensus       215 ~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         215 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEEC
Confidence            8899999999999999999999999999999999744

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3.8e-23  Score=173.80  Aligned_cols=110  Identities=27%  Similarity=0.383  Sum_probs=96.1

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------HH--
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------SK--   71 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~~--   71 (282)
                      |+++ ++|+|||++|.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....      ++  
T Consensus       122 m~~~-~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~  200 (248)
T d2d1ya1         122 MRKV-GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTR  200 (248)
T ss_dssp             HHTT-TCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------C
T ss_pred             cccc-ccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHH
Confidence            3444 469999999999999999999999999999999999999 9999999999999999999875431      11  


Q ss_pred             --HH--hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 --FI--DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 --~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                        +.  .+++|..+|||+++.++||+|+++.+.||..+..||++
T Consensus       201 ~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         201 RDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence              11  16788999999999999999999999999999999996

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=6.5e-23  Score=158.41  Aligned_cols=108  Identities=13%  Similarity=0.183  Sum_probs=96.6

Q ss_pred             ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEcc-------C
Q 023465          140 LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------F  211 (282)
Q Consensus       140 ~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------~  211 (282)
                      .+++.|+|++|||||||++ ++|+.|.+...|.+.....+|+++|+|++|+|+++|.  +.+++||+|++..       +
T Consensus        18 ~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~~g~~v~~~~~~~g~~~~   95 (146)
T d1o89a1          18 QTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFHAGQEVLLTGWGVGENHW   95 (146)
T ss_dssp             EECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCCTTCEEEEECTTBTTTBC
T ss_pred             EEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCccceeeEEeecccceecCC
Confidence            5777899999999999999 9999999988888777778899999999999999766  5799999998743       5


Q ss_pred             CccccEEeecCCCeeeCCC--ChHHHHHhhhHHHHHHHHH
Q 023465          212 GSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIAL  249 (282)
Q Consensus       212 G~~ae~~~v~~~~~~~~p~--~~~~~a~l~~~~~ta~~~l  249 (282)
                      |+||||+++|+++++++|+  +++++|++++++.||+.++
T Consensus        96 G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          96 GGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999  8999999999999986554

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.86  E-value=1.6e-23  Score=170.19  Aligned_cols=134  Identities=18%  Similarity=0.224  Sum_probs=105.6

Q ss_pred             ccCCccccCCCCC---ccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCC
Q 023465          127 SSGSMKRSSSQVP---LNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV  202 (282)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~  202 (282)
                      ++++++++...++   .+++.|+|+++||||||.+ ++|.+|.+.+.+.+  +..+|+++|||++|+|+++|+++++|++
T Consensus         8 ~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~--~~~~P~i~GHE~~G~Vv~~G~~v~~~~~   85 (198)
T d1p0fa1           8 TCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII--PSKFPVILGHEAVGVVESIGAGVTCVKP   85 (198)
T ss_dssp             EEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS--CCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             EEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecc--ccccccccceeeeeeeeecCcccccCcC
Confidence            5666677666554   5677899999999999999 99999999988764  4578999999999999999999999999


Q ss_pred             CCeeEEcc-------------------------------------------------CCccccEEeecCCCeeeCCC--C
Q 023465          203 GTPAAIMT-------------------------------------------------FGSYAEFTMVPSKHILPVAR--P  231 (282)
Q Consensus       203 Gd~V~~~~-------------------------------------------------~G~~ae~~~v~~~~~~~~p~--~  231 (282)
                      ||||++..                                                 .|+|+||+.+++..++++|+  +
T Consensus        86 GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~  165 (198)
T d1p0fa1          86 GDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKIN  165 (198)
T ss_dssp             TCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSC
T ss_pred             CCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCCC
Confidence            99998742                                                 16899999999999999998  4


Q ss_pred             hHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHH
Q 023465          232 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQF  272 (282)
Q Consensus       232 ~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga~g~vG~~  272 (282)
                      ....++..+.         ...+++++.|||.|+ |++|++
T Consensus       166 ~~~~~~~~~~---------~~~v~~~~~vlv~G~-G~iGl~  196 (198)
T d1p0fa1         166 VNFLVSTKLT---------LDQINKAFELLSSGQ-GVRSIM  196 (198)
T ss_dssp             GGGGEEEEEC---------GGGHHHHHHHTTTSS-CSEEEE
T ss_pred             HHHHHHhhcc---------hhhcCCCCEEEEECC-CcceEE
Confidence            3333222222         122345566888897 888764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=8.4e-23  Score=172.01  Aligned_cols=108  Identities=31%  Similarity=0.339  Sum_probs=94.0

Q ss_pred             CCCcEEEEEcCCCc-cCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HH----HH--h
Q 023465            5 KKPGVIINMGSSAG-LYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SK----FI--D   74 (282)
Q Consensus         5 ~~~g~Iv~isS~~~-~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~----~~--~   74 (282)
                      +++|+|||++|..+ ..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....  ++    +.  .
T Consensus       132 ~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  211 (251)
T d1vl8a_         132 SDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI  211 (251)
T ss_dssp             CSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC
T ss_pred             cccccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC
Confidence            34689999999876 45788899999999999999999999 9999999999999999999976432  11    11  1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +++|..+|||+++.++||+|+++++.||..+..||++.
T Consensus       212 pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         212 PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            67889999999999999999999999999999999963

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.86  E-value=5.6e-23  Score=174.07  Aligned_cols=105  Identities=20%  Similarity=0.220  Sum_probs=93.1

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--------------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--------------   70 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--------------   70 (282)
                      ++|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||+|+|+|......              
T Consensus       133 ~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T d1zema1         133 NYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTD  212 (260)
T ss_dssp             TCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSS
T ss_pred             cCCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccC
Confidence            469999999999999999999999999999999999999 99999999999999999998643211              


Q ss_pred             --HHH------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           71 --KFI------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        71 --~~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                        ...      .+++|+.+|||+++.++||+|+.+++.||..+..||+
T Consensus       213 ~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         213 PKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence              111      1578899999999999999999999999999998886

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=4.1e-22  Score=166.84  Aligned_cols=108  Identities=32%  Similarity=0.355  Sum_probs=93.4

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM   76 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~   76 (282)
                      ++++++|+++|| .+..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+++|+|.....++..+      ++
T Consensus       125 ~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl  203 (242)
T d1ulsa_         125 EKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL  203 (242)
T ss_dssp             TTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT
T ss_pred             ccccceeeeecc-ccccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCC
Confidence            344577777766 5677899999999999999999999999 999999999999999999998665443322      67


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      +|..+|||+++.++||+|+++++.||..+..||++.
T Consensus       204 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            889999999999999999999999999999999964

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.1e-22  Score=169.32  Aligned_cols=105  Identities=23%  Similarity=0.267  Sum_probs=93.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHHH-----
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKFI-----   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~~-----   73 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+|+|+|.....       ..+.     
T Consensus       130 ~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  209 (250)
T d1ydea1         130 QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA  209 (250)
T ss_dssp             TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT
T ss_pred             CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhc
Confidence            48999999999999999999999999999999999999 9999999999999999999975431       1111     


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                      .+++|+.+|||++++++||+|+ +++.||..+..||++.
T Consensus       210 ~pl~R~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         210 QPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             STTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCcc
Confidence            2678999999999999999997 7799999999999964

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=1.2e-21  Score=165.34  Aligned_cols=107  Identities=16%  Similarity=0.112  Sum_probs=90.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~~   77 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. |+++|||||+|+||+++|++.....  ++.      ..+++
T Consensus       139 ~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~  218 (256)
T d1ulua_         139 GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR  218 (256)
T ss_dssp             EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS
T ss_pred             CCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999999999999 9999999999999999999875432  111      12678


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      |..+|||++++++||+|+++++.||..+..||++..
T Consensus       219 R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEeC
Confidence            999999999999999999999999999999999765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.84  E-value=3.5e-22  Score=168.35  Aligned_cols=107  Identities=26%  Similarity=0.260  Sum_probs=93.1

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC--CCcEEEEEeCCcccCcchhhhhH-----HHH-----
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR--KGIRINVLCPEFVQTEMGLKVAS-----KFI-----   73 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~--~gI~v~~i~PG~v~T~~~~~~~~-----~~~-----   73 (282)
                      +|+|||+||.++..+.++...|++||+|+.+|+|+|+. +++  ++||||+|+||+++|+|.....+     +..     
T Consensus       130 ~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  209 (253)
T d1hxha_         130 GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK  209 (253)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT
T ss_pred             CCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCcc
Confidence            59999999999999999999999999999999999998 876  56999999999999999754321     111     


Q ss_pred             -hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 -DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 -~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                       .+++|..+|||+++.++||+|+++.+.||..+..||++..
T Consensus       210 ~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         210 LNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             TBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             ccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence             1456788999999999999999999999999999999643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.6e-21  Score=164.63  Aligned_cols=111  Identities=15%  Similarity=0.128  Sum_probs=97.6

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--HHH------HhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--SKF------IDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~~~------~~~~~   77 (282)
                      ++.|+++||..+..+.|+...|++||+|+++|+|+++. |+++|||||+|+||+|+|+|.....  ++.      ..+++
T Consensus       137 ~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~  216 (258)
T d1qsga_         137 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR  216 (258)
T ss_dssp             EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS
T ss_pred             CcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC
Confidence            46799999999999999999999999999999999999 9999999999999999999976432  111      12678


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTS  117 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~p  117 (282)
                      |..+|||+++.+.||+++++.+.||..+..||++....++
T Consensus       217 R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~g~~  256 (258)
T d1qsga_         217 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN  256 (258)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGBCSC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHHhcCC
Confidence            9999999999999999999999999999999998765443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.84  E-value=8.3e-22  Score=167.52  Aligned_cols=112  Identities=29%  Similarity=0.301  Sum_probs=94.1

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCC-hhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----H---H
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYND-PIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----S---K   71 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~-~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----~---~   71 (282)
                      |+++ +.|+|||++|.++..+.++. ..|++||+|+++|+|+|+. |+++|||||+|+||+++|+|.....    +   +
T Consensus       130 m~~~-~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  208 (268)
T d2bgka1         130 MIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE  208 (268)
T ss_dssp             HGGG-TCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH
T ss_pred             Hhhc-CCCCccccccccccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHH
Confidence            3444 46999999999998876654 5899999999999999999 9999999999999999999875431    1   1


Q ss_pred             HH----hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           72 FI----DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~~----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ..    .+++|..+|||+|++++||+|+++.+.||..+..||++..
T Consensus       209 ~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         209 LAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence            11    1456889999999999999999999999999999999744

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.6e-21  Score=164.39  Aligned_cols=104  Identities=34%  Similarity=0.563  Sum_probs=88.6

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHH--hcc-ccCCCcEEEEEeCCcccCcchhhhhHH-----------
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRS--LTP-YKRKGIRINVLCPEFVQTEMGLKVASK-----------   71 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~--la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~-----------   71 (282)
                      .+|+|||+||.++..+.++.+.|++||+|+.+|||+  |+. ++++|||||+|+||+|+|+|......+           
T Consensus       127 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  206 (254)
T d2gdza1         127 EGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKD  206 (254)
T ss_dssp             CCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHH
T ss_pred             CCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHH
Confidence            358999999999999999999999999999999997  677 999999999999999999997543211           


Q ss_pred             -H--HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           72 -F--IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        72 -~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                       +  ..+++|..+|||+|++++||+|++.  .||..+..||++
T Consensus       207 ~~~~~~p~~r~~~pedvA~~v~fL~s~~~--itG~~i~VdGG~  247 (254)
T d2gdza1         207 HIKDMIKYYGILDPPLIANGLITLIEDDA--LNGAIMKITTSK  247 (254)
T ss_dssp             HHHHHHHHHCCBCHHHHHHHHHHHHHCTT--CSSCEEEEETTT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHHcCCC--CCCCEEEECCCC
Confidence             1  1156789999999999999999764  777777778875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.84  E-value=8.2e-22  Score=166.56  Aligned_cols=109  Identities=25%  Similarity=0.262  Sum_probs=91.3

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH----------HHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS----------KFI   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~----------~~~   73 (282)
                      +..|+|||+||.++..+.++...|+++|+|+++|+|.|+. ++++|||||+|+||+++|+|......          ++.
T Consensus       133 ~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  212 (258)
T d1ae1a_         133 SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI  212 (258)
T ss_dssp             HTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH
T ss_pred             ccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH
Confidence            3469999999999999999999999999999999999999 99999999999999999998754311          111


Q ss_pred             --hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 --DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                        .+++|+.+|+|+|+.++||+|+++.+.||..+..||++..
T Consensus       213 ~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         213 VKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             HHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeec
Confidence              2678999999999999999999999999999999999643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=9.9e-22  Score=167.54  Aligned_cols=110  Identities=20%  Similarity=0.143  Sum_probs=94.9

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------H---HHH-
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------S---KFI-   73 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~---~~~-   73 (282)
                      +++|+|+++||.++..+.++...|++||+|+++|||+|+. ++++|||||+|+||+++|+|.....      +   ++. 
T Consensus       135 ~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  214 (274)
T d1xhla_         135 TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIG  214 (274)
T ss_dssp             TTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             cccccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHH
Confidence            4468899999999999999999999999999999999999 9999999999999999999865321      1   111 


Q ss_pred             -----hhhCCCCCHHHHHHHHHHhhcC-CCCceEEEEEecCCccccc
Q 023465           74 -----DLMGGFVPMEMVVKGAFELITD-ESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        74 -----~~~~~~~~~~~~a~~~~~l~~~-~~~~~~~~~~~~~g~~~~~  114 (282)
                           -+++|..+|||+|+.++||+|+ .+++.||..+..||++...
T Consensus       215 ~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         215 SRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence                 1678899999999999999995 5889999999999997654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=1.3e-21  Score=166.68  Aligned_cols=108  Identities=23%  Similarity=0.212  Sum_probs=90.3

Q ss_pred             cEEEEEcC-CCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------H---HHH---
Q 023465            8 GVIINMGS-SAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------S---KFI---   73 (282)
Q Consensus         8 g~Iv~isS-~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------~---~~~---   73 (282)
                      |+||+++| .++..+.++...|++||+|+++|||+|+. ++++|||||+|+||+|+|+|.....      +   +..   
T Consensus       140 g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  219 (272)
T d1xkqa_         140 GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  219 (272)
T ss_dssp             CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             CccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHH
Confidence            55666655 56788999999999999999999999999 9999999999999999999975321      1   111   


Q ss_pred             ---hhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccccc
Q 023465           74 ---DLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        74 ---~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~~p  115 (282)
                         .+++|+.+|||+|+.++||+|++ +.+.||..+..||++....
T Consensus       220 ~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~  265 (272)
T d1xkqa_         220 KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLVM  265 (272)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred             hcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhc
Confidence               15688999999999999999975 5689999999999987644

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.83  E-value=1.9e-21  Score=164.61  Aligned_cols=113  Identities=21%  Similarity=0.300  Sum_probs=96.2

Q ss_pred             ccCCCCcEEEEEcCCCccC-------CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHH
Q 023465            2 QAAKKPGVIINMGSSAGLY-------PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFI   73 (282)
Q Consensus         2 ~~~~~~g~Iv~isS~~~~~-------~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~   73 (282)
                      ++++.+|+|++++|.....       +.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++..
T Consensus       134 ~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~  213 (260)
T d1h5qa_         134 LQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIR  213 (260)
T ss_dssp             HHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH
T ss_pred             cccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHH
Confidence            3455668899988876653       346788999999999999999999 99999999999999999999876544432


Q ss_pred             h------hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccc
Q 023465           74 D------LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW  114 (282)
Q Consensus        74 ~------~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~  114 (282)
                      +      +++|+.+|||+|+.++||+|+++++.||..+..||++..|
T Consensus       214 ~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         214 DHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence            2      6788999999999999999999999999999999997554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.4e-21  Score=163.83  Aligned_cols=108  Identities=29%  Similarity=0.331  Sum_probs=94.1

Q ss_pred             CCCcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------HH----
Q 023465            5 KKPGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------KF----   72 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~~----   72 (282)
                      ++.|+||+++|.++. .+.++...|++||+|+++|+|+|+. ++++|||||+|+||+++|+|......      +.    
T Consensus       123 ~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  202 (245)
T d2ag5a1         123 QKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF  202 (245)
T ss_dssp             HTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH
T ss_pred             CCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHH
Confidence            346999999998885 5788999999999999999999999 99999999999999999999754321      11    


Q ss_pred             --HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 --IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                        ..+++|+.+|||+++.++||+++++.+.||..+..||++.
T Consensus       203 ~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         203 LKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence              1267889999999999999999999999999999999964

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.82  E-value=6.2e-21  Score=159.40  Aligned_cols=97  Identities=20%  Similarity=0.133  Sum_probs=85.1

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +++|+|||+||.++..+.|+.+.|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....++..   .+..+||
T Consensus       134 ~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~---~~~~~Pe  210 (240)
T d2bd0a1         134 QHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ---ALMMMPE  210 (240)
T ss_dssp             HTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTG---GGSBCHH
T ss_pred             cCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhH---hcCCCHH
Confidence            3469999999999999999999999999999999999999 99999999999999999999876544322   3567999


Q ss_pred             HHHHHHHHhhcCCCCceEEEE
Q 023465           84 MVVKGAFELITDESKAGSCLW  104 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~~  104 (282)
                      |+|+.++|++++++++.++..
T Consensus       211 dvA~~v~~l~s~~~~~~~~~~  231 (240)
T d2bd0a1         211 DIAAPVVQAYLQPSRTVVEEI  231 (240)
T ss_dssp             HHHHHHHHHHTSCTTEEEEEE
T ss_pred             HHHHHHHHHHcCCccCccCCE
Confidence            999999999999888766543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.4e-21  Score=164.63  Aligned_cols=109  Identities=18%  Similarity=0.159  Sum_probs=93.0

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----HHHH------h
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----SKFI------D   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----~~~~------~   74 (282)
                      ++|+|||+|| ++..+.++...|++||+|+.+|||+|+. ++++|||||+|+||+|+|+|.....    +++.      .
T Consensus       144 ~~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  222 (297)
T d1yxma1         144 HGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI  222 (297)
T ss_dssp             HCEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS
T ss_pred             cccccccccc-cccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC
Confidence            3588999865 5667789999999999999999999999 9999999999999999999864321    1111      1


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      +++|+.+|||+|++++||+|+++.+.||..+..||++..+.
T Consensus       223 plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~  263 (297)
T d1yxma1         223 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYT  263 (297)
T ss_dssp             TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhc
Confidence            67889999999999999999999999999999999976643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=2.5e-21  Score=164.17  Aligned_cols=107  Identities=23%  Similarity=0.256  Sum_probs=88.0

Q ss_pred             CcEEEEEcCCC-ccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh--H-----------H
Q 023465            7 PGVIINMGSSA-GLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA--S-----------K   71 (282)
Q Consensus         7 ~g~Iv~isS~~-~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~--~-----------~   71 (282)
                      +|+||+++|.. +..+.++...|++||+|+++|+|+|+. ++++|||||+|+||+|+|+|.....  +           .
T Consensus       139 ~g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T d1spxa_         139 KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  218 (264)
T ss_dssp             TCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             cCcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH
Confidence            36777777765 577999999999999999999999999 9999999999999999999865321  0           0


Q ss_pred             H--HhhhCCCCCHHHHHHHHHHhhcCC-CCceEEEEEecCCcccc
Q 023465           72 F--IDLMGGFVPMEMVVKGAFELITDE-SKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~--~~~~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~g~~~~  113 (282)
                      +  ..+++|+.+|||+|++++||+|++ +++.||..+..||++..
T Consensus       219 ~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         219 MKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            1  116789999999999999999964 78899999999999754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6.6e-21  Score=160.00  Aligned_cols=99  Identities=24%  Similarity=0.248  Sum_probs=80.3

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hh-C
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LM-G   77 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~-~   77 (282)
                      ++|+|||+||.++..+.++.+.|++||+|+++|+|+|+. ++++|||||+|+||+++|+|.....++..+      ++ +
T Consensus       141 ~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~  220 (248)
T d2o23a1         141 QRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPS  220 (248)
T ss_dssp             CCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSC
T ss_pred             CceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999999999999 999999999999999999998765443322      33 7


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEe
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWIT  106 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~  106 (282)
                      |+.+|||+|++++||++  +++.||..+.
T Consensus       221 R~g~peevA~~v~fL~s--~~~itGq~I~  247 (248)
T d2o23a1         221 RLGDPAEYAHLVQAIIE--NPFLNGEVIR  247 (248)
T ss_dssp             SCBCHHHHHHHHHHHHH--CTTCCSCEEE
T ss_pred             CCcCHHHHHHHHHHHHh--CCCCCceEeE
Confidence            78999999999999997  4577776653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.80  E-value=5.5e-21  Score=163.04  Aligned_cols=106  Identities=19%  Similarity=0.241  Sum_probs=91.3

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh----------H----H
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA----------S----K   71 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~----------~----~   71 (282)
                      +|+||+++|.++..+.++.+.|++||+|+.+|||+|+. +++. ||||+|+||+|+|+|.....          +    .
T Consensus       134 ~g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T d1bdba_         134 RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADM  212 (276)
T ss_dssp             TCEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHH
T ss_pred             CCCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHH
Confidence            48999999999999999999999999999999999998 9875 99999999999999853221          0    1


Q ss_pred             HH--hhhCCCCCHHHHHHHHHHhhcC-CCCceEEEEEecCCcccc
Q 023465           72 FI--DLMGGFVPMEMVVKGAFELITD-ESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        72 ~~--~~~~~~~~~~~~a~~~~~l~~~-~~~~~~~~~~~~~g~~~~  113 (282)
                      ..  .+++|..+|||++++++||+|+ ++.+.||..+..||++..
T Consensus       213 ~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         213 LKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            11  1678899999999999999985 688999999999999755

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=2.7e-20  Score=162.64  Aligned_cols=112  Identities=18%  Similarity=0.058  Sum_probs=94.6

Q ss_pred             CcEEEEEcCCCccCCCCC-ChhhHhhHHHHHHHHHHhcc-ccC-CCcEEEEEeCCcccCcchhh----------------
Q 023465            7 PGVIINMGSSAGLYPMYN-DPIYSASKGGVVLFTRSLTP-YKR-KGIRINVLCPEFVQTEMGLK----------------   67 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~-~~~Y~asKaal~~~t~~la~-~~~-~gI~v~~i~PG~v~T~~~~~----------------   67 (282)
                      +|+||++||.++..+.|+ ...|++||+|+++|+|+|+. |++ +|||||+|+||+|+|++...                
T Consensus       164 ~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~  243 (329)
T d1uh5a_         164 QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNK  243 (329)
T ss_dssp             EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------------
T ss_pred             ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhh
Confidence            489999999999998887 56899999999999999998 986 69999999999999943221                


Q ss_pred             -----------------------------hhHH------HHhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           68 -----------------------------VASK------FIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        68 -----------------------------~~~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                                                   ..++      ...+++|..+|||++++++||+|+.+++.||..+..||+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         244 NRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             ----------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECCCcc
Confidence                                         0011      11267899999999999999999999999999999999998


Q ss_pred             cccCch
Q 023465          113 YWPTSE  118 (282)
Q Consensus       113 ~~p~pq  118 (282)
                      .+..|+
T Consensus       324 ~~g~p~  329 (329)
T d1uh5a_         324 IMFLPD  329 (329)
T ss_dssp             GCSSCC
T ss_pred             cccCCC
Confidence            776663

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.79  E-value=1.2e-20  Score=162.41  Aligned_cols=110  Identities=20%  Similarity=0.152  Sum_probs=91.9

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------HHHH--
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------SKFI--   73 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------~~~~--   73 (282)
                      .+..+.|++++|.++..+.++...|++||+|+.+|+|.|+. ++++|||||+|+||+++|++.....       .+..  
T Consensus       152 ~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  231 (294)
T d1w6ua_         152 AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR  231 (294)
T ss_dssp             TTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT
T ss_pred             ccccccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhc
Confidence            34467899999999999999999999999999999999999 9999999999999999999864321       1111  


Q ss_pred             hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           74 DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        74 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+++|..+|||+++.++||+++++.+.||..+..||+...
T Consensus       232 ~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         232 IPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence            1678899999999999999999999999999999999644

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.79  E-value=7.4e-20  Score=155.64  Aligned_cols=106  Identities=23%  Similarity=0.232  Sum_probs=90.8

Q ss_pred             CcEEEEEcCCCcc-CCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------------HH
Q 023465            7 PGVIINMGSSAGL-YPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------------KF   72 (282)
Q Consensus         7 ~g~Iv~isS~~~~-~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------------~~   72 (282)
                      +|++++++|..+. .+.++...|++||+||++|+|+|+. |+++|||||+|+||+++|+|......            +.
T Consensus       145 ~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (272)
T d1g0oa_         145 GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEV  224 (272)
T ss_dssp             TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHH
T ss_pred             ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHH
Confidence            3789999888765 4678889999999999999999999 99999999999999999998644311            10


Q ss_pred             -------HhhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           73 -------IDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        73 -------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                             ..+++|+.+|+|+|++++||+|+.+.+.||..+..||++.
T Consensus       225 ~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         225 DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             HHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence                   1257899999999999999999999999999999999963

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.78  E-value=3.1e-20  Score=155.26  Aligned_cols=105  Identities=29%  Similarity=0.323  Sum_probs=89.2

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHh------hhCCCC
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFID------LMGGFV   80 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~------~~~~~~   80 (282)
                      +.|+++|| .+....|+...|+++|+|+++|||+|+. ++++|||||+|+||+++|+|.....++..+      +++|+.
T Consensus       129 ~~i~~~ss-~a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~  207 (241)
T d2a4ka1         129 GSLVLTGS-VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAG  207 (241)
T ss_dssp             CEEEEECC-CTTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCB
T ss_pred             cceeeccc-cccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCc
Confidence            45555555 4555668899999999999999999999 999999999999999999997655443222      678899


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      +|||+++.++||+|+.+++.||..+..||++..
T Consensus       208 ~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         208 RPEEVAQAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CHHHHHHHHHHHhcchhCCCcCceEEeCCCccc
Confidence            999999999999999999999999999999753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=1.7e-20  Score=161.77  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=89.4

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHH
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEM   84 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~   84 (282)
                      ++|+|||+||.++..+.++...|++||+|+.+|+|+|+. ++++|||||+|+||++.|.+.....++..    +..+|||
T Consensus       140 ~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~----~~~~Ped  215 (302)
T d1gz6a_         140 NYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLV----EALKPEY  215 (302)
T ss_dssp             TCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHH----HHSCGGG
T ss_pred             CCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhH----hcCCHHH
Confidence            469999999999999999999999999999999999999 99999999999999999887655444332    3468999


Q ss_pred             HHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           85 VVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        85 ~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +|+.++||+|+.+ +.||..+..||++
T Consensus       216 vA~~v~fL~S~~a-~itG~~i~vdGG~  241 (302)
T d1gz6a_         216 VAPLVLWLCHESC-EENGGLFEVGAGW  241 (302)
T ss_dssp             THHHHHHHTSTTC-CCCSCEEEEETTE
T ss_pred             HHHHHHHHcCCCc-CCCCcEEEeCCCc
Confidence            9999999999776 6799999999995

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=1e-19  Score=153.72  Aligned_cols=104  Identities=24%  Similarity=0.213  Sum_probs=89.5

Q ss_pred             cEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh-------------HHH
Q 023465            8 GVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA-------------SKF   72 (282)
Q Consensus         8 g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~-------------~~~   72 (282)
                      |++++++|..+.. +.++...|++||+|+.+|+|+|+. ++++|||||+|+||+++|+|.....             ++.
T Consensus       134 g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  213 (259)
T d1ja9a_         134 GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI  213 (259)
T ss_dssp             EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHH
T ss_pred             CcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHH
Confidence            6788887776654 789999999999999999999999 9999999999999999999864321             111


Q ss_pred             H------hhhCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           73 I------DLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        73 ~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .      .+++|..+|+|++++++||+|+.+.+.||..+..||++
T Consensus       214 ~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         214 DEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            1      26788999999999999999999999999999999985

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=2.3e-19  Score=153.10  Aligned_cols=110  Identities=19%  Similarity=0.109  Sum_probs=92.9

Q ss_pred             CCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchh--hhhHHHHh--h-hC
Q 023465            4 AKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGL--KVASKFID--L-MG   77 (282)
Q Consensus         4 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~--~~~~~~~~--~-~~   77 (282)
                      ++..|+|++++|.....+.++...|++||+|+++|+|+|+. |+++|||||+|+||++.|....  ...+....  + .+
T Consensus       166 ~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~pl~~  245 (284)
T d1e7wa_         166 RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVPLYQ  245 (284)
T ss_dssp             SCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTCTTTT
T ss_pred             cCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcCCCCC
Confidence            34568999999999999999999999999999999999999 9999999999999997654321  11222222  3 37


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      |..+|||++++++||+|+++.+.||..+..||++..
T Consensus       246 R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         246 RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            889999999999999999999999999999999754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.75  E-value=7.2e-19  Score=149.40  Aligned_cols=112  Identities=15%  Similarity=0.078  Sum_probs=95.2

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H------HHhhhC
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K------FIDLMG   77 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~------~~~~~~   77 (282)
                      .+.|+++||.+...+.+....|++||+|+.+|+|+++. ++++|||||+|+||+++|++.....+  +      ...+++
T Consensus       136 ~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  215 (274)
T d2pd4a1         136 GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR  215 (274)
T ss_dssp             EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS
T ss_pred             CcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhcc
Confidence            35577777777788888999999999999999999999 99999999999999999998754321  1      122668


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCceEEEEEecCCccccccCch
Q 023465           78 GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSE  118 (282)
Q Consensus        78 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p~pq  118 (282)
                      |..+|+|+++.++||+|+.+.+.||..+..||++..+.+++
T Consensus       216 r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g~~~  256 (274)
T d2pd4a1         216 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGA  256 (274)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCC
T ss_pred             CCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhccCCc
Confidence            89999999999999999999999999999999986654443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.75  E-value=2.8e-20  Score=156.65  Aligned_cols=107  Identities=14%  Similarity=0.111  Sum_probs=80.8

Q ss_pred             CcEEEEEcCCCccCCC-CCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH--H----HH---hh
Q 023465            7 PGVIINMGSSAGLYPM-YNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS--K----FI---DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~-~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~--~----~~---~~   75 (282)
                      .|+|++++|..+..+. ++...|++||+|+++|+|+|+. |+++|||||+|+||+++|++......  +    ..   .+
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~P  212 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPP  212 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCS
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCC
Confidence            3567777776665543 3456799999999999999999 99999999999999999999754321  1    11   26


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      ++|+.+|||+++.++||+|+++.+.||..+..||++..
T Consensus       213 lgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         213 MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            78899999999999999999999999999999999743

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.74  E-value=1.6e-18  Score=146.42  Aligned_cols=108  Identities=12%  Similarity=0.157  Sum_probs=92.9

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhh--hhHHHHh--hhCC-C
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLK--VASKFID--LMGG-F   79 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~--~~~~~~~--~~~~-~   79 (282)
                      ..+.+++++|..+..+.|+...|++||+|+++|+|+|+. ++++|||||+|+||+++|++...  ..+++.+  ++++ .
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~  229 (266)
T d1mxha_         150 RNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE  229 (266)
T ss_dssp             CCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCC
T ss_pred             ccccchhhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCC
Confidence            357899999999999999999999999999999999999 99999999999999999987542  2222222  4444 4


Q ss_pred             CCHHHHHHHHHHhhcCCCCceEEEEEecCCcccc
Q 023465           80 VPMEMVVKGAFELITDESKAGSCLWITNRRGMEY  113 (282)
Q Consensus        80 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~  113 (282)
                      .+|||++++++||+|+++.+.||..+..||++..
T Consensus       230 ~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         230 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            7999999999999999999999999999999754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=5.4e-19  Score=147.15  Aligned_cols=107  Identities=22%  Similarity=0.258  Sum_probs=87.7

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.++...|++||+|+++|+|+|+. ++  ++|||||+|+||+++|+|.....++  ....++.+||
T Consensus       121 ~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~pe  198 (236)
T d1dhra_         121 GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--ADFSSWTPLE  198 (236)
T ss_dssp             EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--SCGGGSEEHH
T ss_pred             ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc--chhhcCCCHH
Confidence            48999999999999999999999999999999999998 87  6899999999999999997654322  1234567899


Q ss_pred             HHHHHHHHhhcCCCCceEEE---EEecCCcccccc
Q 023465           84 MVVKGAFELITDESKAGSCL---WITNRRGMEYWP  115 (282)
Q Consensus        84 ~~a~~~~~l~~~~~~~~~~~---~~~~~g~~~~~p  115 (282)
                      ++++.+.+|+++.+.+.+|.   ++..+|..+..|
T Consensus       199 ~va~~~~~l~s~~~~~i~G~~i~v~~~~g~t~~~p  233 (236)
T d1dhra_         199 FLVETFHDWITGNKRPNSGSLIQVVTTDGKTELTP  233 (236)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHhCCCccCCCCCeEEEEEECCEEEEEe
Confidence            99999999999988766663   344465554443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=2.9e-18  Score=144.64  Aligned_cols=99  Identities=15%  Similarity=0.231  Sum_probs=83.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhH-----HH------Hhh
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVAS-----KF------IDL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~-----~~------~~~   75 (282)
                      .|+|||+||.++..+.++++.|++||+|+++|+|+|+. +.+|||||+|+||+|+|+|.....+     +.      ..+
T Consensus       148 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~-e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T d1oaaa_         148 SKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAA-EEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS  226 (259)
T ss_dssp             EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH-HCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHh-CCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC
Confidence            58999999999999999999999999999999999986 3579999999999999999754321     11      125


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEec
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITN  107 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~  107 (282)
                      +++..+|+|+++.++++++++ .+.||..++.
T Consensus       227 ~~r~~~p~evA~~i~~ll~~~-s~~TG~~idv  257 (259)
T d1oaaa_         227 DGALVDCGTSAQKLLGLLQKD-TFQSGAHVDF  257 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHHC-CSCTTEEEET
T ss_pred             CCCCCCHHHHHHHHHHHhhhc-cCCCCCeEEe
Confidence            678899999999999999874 4788877754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.1e-18  Score=144.28  Aligned_cols=100  Identities=22%  Similarity=0.224  Sum_probs=82.4

Q ss_pred             CCcEEEEEcCCCccCC--CCCChhhHhhHHHHHHHHHHhcc-c--cCCCcEEEEEeCCcccCcchhhhhHH----H--Hh
Q 023465            6 KPGVIINMGSSAGLYP--MYNDPIYSASKGGVVLFTRSLTP-Y--KRKGIRINVLCPEFVQTEMGLKVASK----F--ID   74 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~t~~la~-~--~~~gI~v~~i~PG~v~T~~~~~~~~~----~--~~   74 (282)
                      .+|+|||+||.++...  .+....|++||+|+.+|+|+|+. +  +++|||||+|+||+++|++.....++    .  ..
T Consensus       141 ~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~  220 (257)
T d1xg5a_         141 DDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY  220 (257)
T ss_dssp             CSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH
T ss_pred             CCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC
Confidence            3689999999998754  45667799999999999999997 7  78999999999999999997654322    1  12


Q ss_pred             hhCCCCCHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           75 LMGGFVPMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        75 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      ++++..+|||+|++++||+++++++.+|..+
T Consensus       221 ~~~r~~~pedvA~~v~fL~s~~a~~itG~i~  251 (257)
T d1xg5a_         221 EQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQ  251 (257)
T ss_dssp             C---CBCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             CCCCCcCHHHHHHHHHHHhCChhcCeECCEE
Confidence            5678899999999999999999999999754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.2e-18  Score=149.05  Aligned_cols=96  Identities=21%  Similarity=0.193  Sum_probs=75.9

Q ss_pred             CccCCCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh---H------
Q 023465            1 MQAAKKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA---S------   70 (282)
Q Consensus         1 m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~---~------   70 (282)
                      |+++ ++|+|||+||.++..+.|+.+.|++||+|+.+|+++|+. ++++|||||+|+||+|+|+|..+..   +      
T Consensus       129 m~~~-~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~  207 (285)
T d1jtva_         129 MKRR-GSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRT  207 (285)
T ss_dssp             HHHH-TCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTS
T ss_pred             HHHc-CCCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhcc
Confidence            3443 469999999999999999999999999999999999999 9999999999999999999875421   0      


Q ss_pred             ------HHH--------hhhCCCCCHHHHHHHHHHhhcCCC
Q 023465           71 ------KFI--------DLMGGFVPMEMVVKGAFELITDES   97 (282)
Q Consensus        71 ------~~~--------~~~~~~~~~~~~a~~~~~l~~~~~   97 (282)
                            ++.        .+..+..+|||+|+.++++++.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         208 DIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             chhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence                  000        022457899999999999998765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.69  E-value=3.7e-18  Score=143.51  Aligned_cols=103  Identities=24%  Similarity=0.285  Sum_probs=82.8

Q ss_pred             CCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhH------HHHh-hh-
Q 023465            6 KPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVAS------KFID-LM-   76 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~------~~~~-~~-   76 (282)
                      .+|+|||+||.++..+.+++..|++||+|+.+|+|+|+. +.++|||||+|+||+|+|+|......      .+.+ .+ 
T Consensus       129 ~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  208 (254)
T d1sbya1         129 PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS  208 (254)
T ss_dssp             CCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT
T ss_pred             CCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcccc
Confidence            469999999999999999999999999999999999999 99999999999999999998653211      1111 22 


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           77 GGFVPMEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        77 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      .+..+||++++.++++++...   +|..+..||+.
T Consensus       209 ~~~~~~e~va~~~~~~~~~~~---tG~vi~vdgG~  240 (254)
T d1sbya1         209 HPTQTSEQCGQNFVKAIEANK---NGAIWKLDLGT  240 (254)
T ss_dssp             SCCEEHHHHHHHHHHHHHHCC---TTCEEEEETTE
T ss_pred             CCCCCHHHHHHHHHHhhhCCC---CCCEEEECCCE
Confidence            235689999999998886543   45555567763

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.69  E-value=2.6e-17  Score=139.08  Aligned_cols=105  Identities=16%  Similarity=0.051  Sum_probs=89.0

Q ss_pred             cEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhh------------HHHH-
Q 023465            8 GVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVA------------SKFI-   73 (282)
Q Consensus         8 g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~------------~~~~-   73 (282)
                      +.+++++|.....+.|+...|++||+|+.+|+|+++. ++++|||||+|+||+++|++.....            +.+. 
T Consensus       140 ~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  219 (268)
T d2h7ma1         140 GGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  219 (268)
T ss_dssp             EEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             ccccccccccccccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHH
Confidence            4566677777888899999999999999999999999 9999999999999999999864321            1111 


Q ss_pred             -----hhhCC-CCCHHHHHHHHHHhhcCCCCceEEEEEecCCccc
Q 023465           74 -----DLMGG-FVPMEMVVKGAFELITDESKAGSCLWITNRRGME  112 (282)
Q Consensus        74 -----~~~~~-~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~  112 (282)
                           .++.+ ..+|+|+++.+.||+|+.+.+.||..+..||+++
T Consensus       220 ~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         220 GWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence                 14444 7899999999999999999999999999999974

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.65  E-value=4.6e-17  Score=139.57  Aligned_cols=109  Identities=17%  Similarity=0.065  Sum_probs=90.3

Q ss_pred             CcEEEEEcCCCccC-CCCCChhhHhhHHHHHHHHHHhcc-cc-CCCcEEEEEeCCcccCcchhhh--hHHHH------hh
Q 023465            7 PGVIINMGSSAGLY-PMYNDPIYSASKGGVVLFTRSLTP-YK-RKGIRINVLCPEFVQTEMGLKV--ASKFI------DL   75 (282)
Q Consensus         7 ~g~Iv~isS~~~~~-~~~~~~~Y~asKaal~~~t~~la~-~~-~~gI~v~~i~PG~v~T~~~~~~--~~~~~------~~   75 (282)
                      +|+++++++.+... ..+....|+++|+++.++++.++. ++ ++|||||+|+||+++|++....  .++..      .+
T Consensus       170 ~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~P  249 (297)
T d1d7oa_         170 GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP  249 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSS
T ss_pred             CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCC
Confidence            46777777766654 457788999999999999999988 75 6899999999999999997542  12211      26


Q ss_pred             hCCCCCHHHHHHHHHHhhcCCCCceEEEEEecCCcccccc
Q 023465           76 MGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWP  115 (282)
Q Consensus        76 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~~~~p  115 (282)
                      ++|..+|||+++.++||+|+++.+.||..+..||++..+.
T Consensus       250 lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G  289 (297)
T d1d7oa_         250 IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG  289 (297)
T ss_dssp             SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcC
Confidence            7899999999999999999999999999999999976644

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.1e-17  Score=134.67  Aligned_cols=89  Identities=28%  Similarity=0.363  Sum_probs=75.8

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-ccC---CCcEEEEEeCCcccCcchhhhhHHHHhhhCCCC
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YKR---KGIRINVLCPEFVQTEMGLKVASKFIDLMGGFV   80 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~~---~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~   80 (282)
                      ++.|+|||+||.++..+.|+++.|++||+|+++|+++|+. +++   +||+||+|+||+|+|+|......    +..+..
T Consensus       133 ~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~----~~~~~~  208 (244)
T d1yb1a_         133 NNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST----SLGPTL  208 (244)
T ss_dssp             TTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH----HHCCCC
T ss_pred             cCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc----cccCCC
Confidence            3469999999999999999999999999999999999997 765   68999999999999999865432    345678


Q ss_pred             CHHHHHHHHHHhhcCCC
Q 023465           81 PMEMVVKGAFELITDES   97 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~   97 (282)
                      +||++++.++..+..+.
T Consensus       209 ~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         209 EPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             CHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhcCC
Confidence            99999999998776554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.62  E-value=1.5e-16  Score=131.93  Aligned_cols=95  Identities=19%  Similarity=0.224  Sum_probs=77.4

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.+++..|++||+|+++|+|+|+. ++  +.+|+||+|+||+++|+|.....++.  ...++.+|+
T Consensus       121 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~--~~~~~~~~~  198 (235)
T d1ooea_         121 GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA--DHSSWTPLS  198 (235)
T ss_dssp             EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC--CGGGCBCHH
T ss_pred             ceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC--ccccCCCHH
Confidence            48999999999999999999999999999999999997 87  57999999999999999976543321  223567999


Q ss_pred             HHHHHHHHhhcC-CCCceEEE
Q 023465           84 MVVKGAFELITD-ESKAGSCL  103 (282)
Q Consensus        84 ~~a~~~~~l~~~-~~~~~~~~  103 (282)
                      ++++.+++++.+ .+...+|.
T Consensus       199 ~va~~~~~~l~~~~~~~~tG~  219 (235)
T d1ooea_         199 FISEHLLKWTTETSSRPSSGA  219 (235)
T ss_dssp             HHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHHhcCccccCCCce
Confidence            999999865544 44444543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.59  E-value=6e-16  Score=118.54  Aligned_cols=117  Identities=14%  Similarity=-0.000  Sum_probs=87.2

Q ss_pred             CCCccccCCCCCCCcEEEEEEc-cccccccccccCCCCCCCCCCCcccCCceEEEEEeCCCCCCCCCCCeeEEccCCccc
Q 023465          137 QVPLNLNVQLPESFEKLLWIYG-QVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYA  215 (282)
Q Consensus       137 ~~~~~~~~p~~~~~~vlv~v~~-~~~~~d~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~G~~a  215 (282)
                      .+..+.++|+|++||||||+++ ++++......     .+.+.+.++..+++|+|++  |++++|++||+|++.  ++|+
T Consensus        22 f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~-----~~~~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~--~gw~   92 (147)
T d1v3va1          22 FELKTVELPPLKNGEVLLEALFLSVDPYMRIAS-----KRLKEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQ--SGWT   92 (147)
T ss_dssp             EEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG-----GGSCTTSBCCCCEEEEEEE--ESCTTSCTTCEEEEC--CCSB
T ss_pred             eEEEEEECCCCCCCEEEEEEEEEeEcccccccc-----cccccCCccccceEEEEEE--eCCCcccCCCEEEEc--cCCE
Confidence            4455677899999999999999 7766532211     1334555677799999998  677899999999865  7899


Q ss_pred             cEEeecCCCeeeCCC--C-----hHHHHHhhhHHHHH-HHHHHHhCCCCCCEEEEe
Q 023465          216 EFTMVPSKHILPVAR--P-----DPEVVAMLTSGLTA-SIALEQAGPASGKKVLVT  263 (282)
Q Consensus       216 e~~~v~~~~~~~~p~--~-----~~~~a~l~~~~~ta-~~~l~~~~~~~g~~vli~  263 (282)
                      ||.+++.+.+.++|+  +     ....+++...++|| |..| ....+.||+||+.
T Consensus        93 ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl-~~~~k~Getvv~s  147 (147)
T d1v3va1          93 THFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM-LNGANLGKAVVTA  147 (147)
T ss_dssp             SEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH-HTTCCSSEEEEEC
T ss_pred             eEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh-hCCCCCCCEEEeC
Confidence            999999999999975  1     22345677788875 4455 3334789999973

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.57  E-value=1.7e-15  Score=126.60  Aligned_cols=97  Identities=22%  Similarity=0.161  Sum_probs=75.5

Q ss_pred             CCcEEEEEcCCCccC---CCCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCC
Q 023465            6 KPGVIINMGSSAGLY---PMYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVP   81 (282)
Q Consensus         6 ~~g~Iv~isS~~~~~---~~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~   81 (282)
                      ..|+|||++|.++..   +.+++..|++||+|+++|+|+|+. ++++||+||+|+||+|+|+|.....         ..+
T Consensus       145 ~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~---------~~~  215 (248)
T d1snya_         145 GRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA---------PLD  215 (248)
T ss_dssp             TTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC---------SBC
T ss_pred             cccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC---------CCC
Confidence            368999999998864   456788999999999999999998 9999999999999999999975421         234


Q ss_pred             HHHHHHHHHHhhcCCCCceEEEEEecCCcc
Q 023465           82 MEMVVKGAFELITDESKAGSCLWITNRRGM  111 (282)
Q Consensus        82 ~~~~a~~~~~l~~~~~~~~~~~~~~~~g~~  111 (282)
                      +++.++.+++++.......+|.++..+|..
T Consensus       216 ~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         216 VPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             chHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            555555566665554444567788777753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.3e-14  Score=122.51  Aligned_cols=89  Identities=24%  Similarity=0.224  Sum_probs=74.0

Q ss_pred             CcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhcc-cc--CCCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHH
Q 023465            7 PGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTP-YK--RKGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPME   83 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~-~~--~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~   83 (282)
                      +|+|||+||.++..+.|+.+.|++||+|+++|+|+|+. ++  +.||+||+|+||+|+|+|..+........  ...+||
T Consensus       142 ~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~~--~~~~~e  219 (269)
T d1xu9a_         142 NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHM--QAAPKE  219 (269)
T ss_dssp             TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGG--GCBCHH
T ss_pred             CCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCccc--cCCCHH
Confidence            58999999999999999999999999999999999997 76  46899999999999999976543222211  246899


Q ss_pred             HHHHHHHHhhcCCC
Q 023465           84 MVVKGAFELITDES   97 (282)
Q Consensus        84 ~~a~~~~~l~~~~~   97 (282)
                      ++++.++.......
T Consensus       220 ~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         220 ECALEIIKGGALRQ  233 (269)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhcCC
Confidence            99999988765444

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.43  E-value=7.5e-14  Score=116.48  Aligned_cols=95  Identities=19%  Similarity=0.302  Sum_probs=68.5

Q ss_pred             CcEEEEEcCCCccCC-------CCCChhhHhhHHHHHHHHHHhcc-ccCCCcEEEEEeCCcccCcchhhhhHHHHhhhCC
Q 023465            7 PGVIINMGSSAGLYP-------MYNDPIYSASKGGVVLFTRSLTP-YKRKGIRINVLCPEFVQTEMGLKVASKFIDLMGG   78 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~-------~~~~~~Y~asKaal~~~t~~la~-~~~~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~   78 (282)
                      .+++++++|..+...       .....+|++||+|+++|+++|+. ++++||+||+|+||+|+|+|....         .
T Consensus       144 ~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~---------~  214 (250)
T d1yo6a1         144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---------A  214 (250)
T ss_dssp             TCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------
T ss_pred             eccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC---------C
Confidence            488999998766543       23456799999999999999999 999999999999999999997532         2


Q ss_pred             CCCHHHHHHHHHHhhcCCCCceEEEEEecCCc
Q 023465           79 FVPMEMVVKGAFELITDESKAGSCLWITNRRG  110 (282)
Q Consensus        79 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~g~  110 (282)
                      ..+||+.++.++..+.+.....+|.++..++.
T Consensus       215 ~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         215 ALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence            36899999999999987666667777766653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.5e-13  Score=116.30  Aligned_cols=73  Identities=19%  Similarity=0.284  Sum_probs=59.0

Q ss_pred             ChhhHhhHHHHHHHHHHhcc-ccC----CCcEEEEEeCCcccCcchhhhhHHHHhhhCCCCCHHHHHHHHHHhhc--CCC
Q 023465           25 DPIYSASKGGVVLFTRSLTP-YKR----KGIRINVLCPEFVQTEMGLKVASKFIDLMGGFVPMEMVVKGAFELIT--DES   97 (282)
Q Consensus        25 ~~~Y~asKaal~~~t~~la~-~~~----~gI~v~~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~   97 (282)
                      ...|++||+|+.+|++.++. |++    .||+||+|+||+|+|+|....         ...+|||.|+.+++++.  ++.
T Consensus       189 ~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~---------~~~~pee~A~~~~~~a~~~~~~  259 (275)
T d1wmaa1         189 SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK---------ATKSPEEGAETPVYLALLPPDA  259 (275)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT---------CSBCHHHHTHHHHHHHSCCTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc---------ccCCHHHHHHHHHHHHcCChhh
Confidence            45799999999999999986 654    699999999999999997532         24589999999999873  344


Q ss_pred             CceEEEEEe
Q 023465           98 KAGSCLWIT  106 (282)
Q Consensus        98 ~~~~~~~~~  106 (282)
                      ...+|.++.
T Consensus       260 ~~~~G~~~~  268 (275)
T d1wmaa1         260 EGPHGQFVS  268 (275)
T ss_dssp             CCCCSCEEE
T ss_pred             cCCCeEEEE
Confidence            456777775

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=2.3e-10  Score=76.72  Aligned_cols=51  Identities=24%  Similarity=0.382  Sum_probs=44.4

Q ss_pred             ChHHHHHhhhHHHHHHHHHH---H-hCCCCCCEEEEeCCCchHHHHHHHHHHHhh
Q 023465          231 PDPEVVAMLTSGLTASIALE---Q-AGPASGKKVLVTAAAGGTGQFAVQVYFQIQ  281 (282)
Q Consensus       231 ~~~~~a~l~~~~~ta~~~l~---~-~~~~~g~~vli~ga~g~vG~~a~q~a~~~~  281 (282)
                      ++.+++++++++.|||.++.   + ...++|++|||+|++|+||.+++|+||++.
T Consensus         2 s~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G   56 (77)
T d1o8ca2           2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLG   56 (77)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             CHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcC
Confidence            57899999999999998863   2 345899999999999999999999999863

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.92  E-value=2.7e-10  Score=94.81  Aligned_cols=92  Identities=8%  Similarity=-0.044  Sum_probs=66.2

Q ss_pred             CCCcEEEEEcCCCccCCCCCChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccC-cchhhhhHHHHhhh-CCCCCH
Q 023465            5 KKPGVIINMGSSAGLYPMYNDPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQT-EMGLKVASKFIDLM-GGFVPM   82 (282)
Q Consensus         5 ~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T-~~~~~~~~~~~~~~-~~~~~~   82 (282)
                      .+.++||++||+++..+.++++.|+++|+++++|++.+   ..+||++++|+||++.+ .|......+..... -...+|
T Consensus       134 ~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~---~~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~  210 (259)
T d2fr1a1         134 LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR---RSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPP  210 (259)
T ss_dssp             SCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH---HHTTCCCEEEEECCBC------------CTTTTEECBCH
T ss_pred             cCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHHH---HhCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCH
Confidence            34689999999999999999999999999999988775   45799999999998854 44433222111111 134789


Q ss_pred             HHHHHHHHHhhcCCCCc
Q 023465           83 EMVVKGAFELITDESKA   99 (282)
Q Consensus        83 ~~~a~~~~~l~~~~~~~   99 (282)
                      +++++.+..++......
T Consensus       211 ~~~~~~l~~~l~~~~~~  227 (259)
T d2fr1a1         211 ETACRALQNALDRAEVC  227 (259)
T ss_dssp             HHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHHHhCCCce
Confidence            99999999998765543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=3.1e-05  Score=59.07  Aligned_cols=35  Identities=29%  Similarity=0.322  Sum_probs=31.7

Q ss_pred             ChHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEeCC
Q 023465          231 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA  265 (282)
Q Consensus       231 ~~~~~a~l~~~~~ta~~~l~~~~~~~g~~vli~ga  265 (282)
                      ++..+|+++|++.|+|+++++++++|||+|||+|+
T Consensus         5 ~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~Ga   39 (168)
T d1uufa2           5 QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGI   39 (168)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             cHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            35677889999999999999999999999999998

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.01  E-value=0.11  Score=35.04  Aligned_cols=28  Identities=25%  Similarity=0.386  Sum_probs=22.3

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCeeEEccCCc
Q 023465          186 AVGLIAAVGDSVN----------NVKVGTPAAIMTFGS  213 (282)
Q Consensus       186 ~~G~V~~vG~~v~----------~~~~Gd~V~~~~~G~  213 (282)
                      ..|+|+++|++..          .+++||+|+...+++
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~~~g   75 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGG   75 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTC
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEcccCc
Confidence            4699999998752          388999999876654

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=86.88  E-value=0.6  Score=30.92  Aligned_cols=41  Identities=29%  Similarity=0.349  Sum_probs=28.1

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCeeEEccC-Ccc------ccEEeecCCCee
Q 023465          186 AVGLIAAVGDSVN---------NVKVGTPAAIMTF-GSY------AEFTMVPSKHIL  226 (282)
Q Consensus       186 ~~G~V~~vG~~v~---------~~~~Gd~V~~~~~-G~~------ae~~~v~~~~~~  226 (282)
                      ..|+|+++|++..         ..++||+|....+ |+-      .||..++++.++
T Consensus        36 ~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~~~~~dg~~y~ii~e~dIl   92 (97)
T d1aono_          36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDIL   92 (97)
T ss_dssp             CEEEEEEECSBCCTTSSCCCBCSCCTTCEEEECCCSSCEEEESSSCEEEEEETTTEE
T ss_pred             eeEEEEEEeeeEEccCCcCccccCCCCCEEEEecccCceEEEECCEEEEEEEHHHEE
Confidence            4699999998653         3899999998653 321      156666665543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=84.08  E-value=0.82  Score=37.24  Aligned_cols=73  Identities=11%  Similarity=0.033  Sum_probs=43.7

Q ss_pred             hhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCc----chh-----hhhHHHHh----------hhCCCCCHHHHH
Q 023465           26 PIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTE----MGL-----KVASKFID----------LMGGFVPMEMVV   86 (282)
Q Consensus        26 ~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~----~~~-----~~~~~~~~----------~~~~~~~~~~~a   86 (282)
                      ..|+.||.+.+.+.+.+..-...++++.+|+|+.+-=+    ...     ........          ....+...+|++
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva  253 (342)
T d1y1pa1         174 WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIG  253 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHH
T ss_pred             CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHH
Confidence            36999999999988887662245678888887765211    110     00000000          111246789999


Q ss_pred             HHHHHhhcCCCC
Q 023465           87 KGAFELITDESK   98 (282)
Q Consensus        87 ~~~~~l~~~~~~   98 (282)
                      ++.+..+.....
T Consensus       254 ~~~i~~l~~~~~  265 (342)
T d1y1pa1         254 LLHLGCLVLPQI  265 (342)
T ss_dssp             HHHHHHHHCTTC
T ss_pred             HHHHHhhcCccc
Confidence            998887765443

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

Probab=82.72  E-value=0.5  Score=31.33  Aligned_cols=28  Identities=29%  Similarity=0.427  Sum_probs=21.8

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCeeEEccCCc
Q 023465          186 AVGLIAAVGDSVN---------NVKVGTPAAIMTFGS  213 (282)
Q Consensus       186 ~~G~V~~vG~~v~---------~~~~Gd~V~~~~~G~  213 (282)
                      ..|+|+++|++..         ..++||+|+...+++
T Consensus        37 ~~g~VvavG~g~~~~~g~~~p~~vkvGD~Vl~~~~~g   73 (96)
T d1we3o_          37 QKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGG   73 (96)
T ss_dssp             SEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCS
T ss_pred             eEEEEeeecceEecCCCCEEEeeEEeCCEEEEccCCC
Confidence            3699999998642         389999999876655

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=82.38  E-value=2.2  Score=33.58  Aligned_cols=31  Identities=13%  Similarity=0.230  Sum_probs=24.5

Q ss_pred             HHHHhCCCCCCEEEEeCCCchHHHHHHHHHHHh
Q 023465          248 ALEQAGPASGKKVLVTAAAGGTGQFAVQVYFQI  280 (282)
Q Consensus       248 ~l~~~~~~~g~~vli~ga~g~vG~~a~q~a~~~  280 (282)
                      .+..++++||++||=.|+ |. |.+++.+|+++
T Consensus        95 Ii~~l~i~pG~~VLDiG~-Gs-G~lt~~lA~~~  125 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAV  125 (266)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHT
T ss_pred             HHHhhCCCCCCEEEECCC-CC-CHHHHHHHHHh
Confidence            457899999999999997 33 67777777764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.38  E-value=1.3  Score=33.01  Aligned_cols=93  Identities=6%  Similarity=-0.020  Sum_probs=53.3

Q ss_pred             CcEEEEEcCCCccCCCCC----ChhhHhhHHHHHHHHHHhccccCCCcEEEEEeCCcccCcchhhhhHHH--HhhhCCCC
Q 023465            7 PGVIINMGSSAGLYPMYN----DPIYSASKGGVVLFTRSLTPYKRKGIRINVLCPEFVQTEMGLKVASKF--IDLMGGFV   80 (282)
Q Consensus         7 ~g~Iv~isS~~~~~~~~~----~~~Y~asKaal~~~t~~la~~~~~gI~v~~i~PG~v~T~~~~~~~~~~--~~~~~~~~   80 (282)
                      -.++|++||.........    ...|...|...+.+      ++..+++...|.||++............  ......+.
T Consensus       103 v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~------l~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i  176 (205)
T d1hdoa_         103 VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV------LRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVI  176 (205)
T ss_dssp             CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH------HHHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEE
T ss_pred             CCeEEEEeeeeccCCCccccccccccchHHHHHHHH------HHhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcC
Confidence            358999988665433222    23455555544433      4457899999999987433211100000  00112346


Q ss_pred             CHHHHHHHHHHhhcCCCCceEEEEE
Q 023465           81 PMEMVVKGAFELITDESKAGSCLWI  105 (282)
Q Consensus        81 ~~~~~a~~~~~l~~~~~~~~~~~~~  105 (282)
                      +.+|+|+.++..+.++...+....+
T Consensus       177 ~~~DvA~~~~~~l~~~~~~g~~~~~  201 (205)
T d1hdoa_         177 SKHDLGHFMLRCLTTDEYDGHSTYP  201 (205)
T ss_dssp             EHHHHHHHHHHTTSCSTTTTCEEEE
T ss_pred             CHHHHHHHHHHHhCCCCCCCEEEec
Confidence            8999999999999776544444333