Query 023466
Match_columns 282
No_of_seqs 187 out of 909
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 07:16:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023466.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023466hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tm9a_ a.225.1.1 (A:) Hypothe 7.7 1.4E+02 0.0099 21.1 3.0 19 203-221 94-112 (137)
2 d1aa7a_ a.95.1.1 (A:) Influenz 7.0 1.7E+02 0.013 21.4 3.4 45 117-166 48-92 (158)
3 d2e74d2 f.23.12.1 (D:12-45) IS 6.4 1.5E+02 0.011 16.2 2.0 23 118-140 5-27 (34)
4 d2f3ci1 g.68.1.1 (I:5-50) Bloo 3.9 70 0.0051 18.7 -0.6 11 3-13 10-20 (46)
5 d1o82a_ a.64.2.1 (A:) Bacterio 3.8 4.9E+02 0.035 16.0 3.7 20 232-251 4-23 (70)
6 d2oara1 f.16.1.1 (A:10-118) Ga 3.8 4.1E+02 0.03 18.1 3.6 11 126-136 6-16 (109)
7 d2erwa1 g.68.1.1 (A:4-56) Bloo 3.6 80 0.0058 19.0 -0.6 15 3-18 11-25 (53)
8 d1p4ea1 a.60.9.1 (A:2-129) Flp 3.4 3.7E+02 0.027 18.2 2.9 38 232-269 6-45 (128)
9 d2v5pc1 g.1.1.1 (C:6-63) Insul 3.3 65 0.0047 20.4 -1.3 12 2-13 13-24 (58)
10 d1lr7a2 g.68.1.1 (A:89-136) Do 3.2 92 0.0067 18.4 -0.6 10 4-13 14-23 (48)
No 1
>d1tm9a_ a.225.1.1 (A:) Hypothetical protein MG354 {Mycoplasma genitalium [TaxId: 2097]}
Probab=7.69 E-value=1.4e+02 Score=21.07 Aligned_cols=19 Identities=26% Similarity=0.658 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhcCCCCC
Q 023466 203 PLLGIVIVKAAYRFGFIGS 221 (282)
Q Consensus 203 P~i~~~i~~~~~~~~~l~~ 221 (282)
|++.+-+.++++++|++.+
T Consensus 94 ~aiifci~yflyhf~fl~d 112 (137)
T d1tm9a_ 94 PAIIFCVIYFLYHFGFLKD 112 (137)
T ss_dssp HHHHHHHHHHHHHTTCSCC
T ss_pred ceehhhHHHHHHHhccccc
Confidence 5566667788899999985
No 2
>d1aa7a_ a.95.1.1 (A:) Influenza virus matrix protein M1 {Influenza A virus [TaxId: 11320]}
Probab=7.00 E-value=1.7e+02 Score=21.35 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=29.1
Q ss_pred hhhhhchhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChh
Q 023466 117 LKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAI 166 (282)
Q Consensus 117 lk~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~ai 166 (282)
-|.+++|..-|++-..+....|.=|.+ ..=++++++++-.|+-+.
T Consensus 48 tr~~Ls~ltK~ilG~~~~~~~Pser~l-----q~RRFv~naLngngdp~~ 92 (158)
T d1aa7a_ 48 TRPILSPLTKGILGFVFTLTVPSERGL-----QRRRFVQNALNGNGDPNN 92 (158)
T ss_dssp TCSSSCHHHHHHHHHHHHHHSSCCTTC-----CCCHHHHHHTSGGGCHHH
T ss_pred cCcccchHHhhhhheEEEEeccchhhh-----HHhHhhhccccCCCCchh
Confidence 378899998886544445555532211 112799999998887654
No 3
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=6.37 E-value=1.5e+02 Score=16.24 Aligned_cols=23 Identities=13% Similarity=0.466 Sum_probs=17.6
Q ss_pred hhhhchhHHHHHHHHHHHhhccc
Q 023466 118 KMIFAPSTIAAIIGFVIGTISPF 140 (282)
Q Consensus 118 k~l~nP~iia~i~Glli~~~p~l 140 (282)
|+++|=.+.+.+.|..++..-|+
T Consensus 5 rqfmnlltfgt~tg~alg~lypv 27 (34)
T d2e74d2 5 RQFMNLLAFGTVTGVALGALYPL 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHhhhhhH
Confidence 56777778899999988876543
No 4
>d2f3ci1 g.68.1.1 (I:5-50) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}
Probab=3.93 E-value=70 Score=18.69 Aligned_cols=11 Identities=18% Similarity=0.205 Sum_probs=7.7
Q ss_pred cccccchhhHH
Q 023466 3 RIQCNFSLSYE 13 (282)
Q Consensus 3 ~~~~~~G~~Y~ 13 (282)
-+||++|+.|.
T Consensus 10 PVCGsDg~TY~ 20 (46)
T d2f3ci1 10 RVCGSDGNTYS 20 (46)
T ss_dssp CEEETTSCEES
T ss_pred ccCCCCCCEeC
Confidence 36777777776
No 5
>d1o82a_ a.64.2.1 (A:) Bacteriocin AS-48 {Enterococcus faecalis [TaxId: 1351]}
Probab=3.78 E-value=4.9e+02 Score=16.01 Aligned_cols=20 Identities=15% Similarity=0.272 Sum_probs=11.3
Q ss_pred hhcccHHHHHHHHHHHcCCC
Q 023466 232 QYAVPPALAVGTIIQLFETS 251 (282)
Q Consensus 232 ~~a~P~A~~~~~ia~~~~~~ 251 (282)
.++.|.++.-+++-.....+
T Consensus 4 efgipa~ia~~vlniv~agg 23 (70)
T d1o82a_ 4 EFGIPAAVAGTVLNVVEAGG 23 (70)
T ss_dssp HHCCCHHHHHHHHHHHHTTC
T ss_pred hhCCcHHHHHHHHHhhccCc
Confidence 35667766666655554443
No 6
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=3.75 E-value=4.1e+02 Score=18.14 Aligned_cols=11 Identities=36% Similarity=0.637 Sum_probs=5.4
Q ss_pred HHHHHHHHHHh
Q 023466 126 IAAIIGFVIGT 136 (282)
Q Consensus 126 ia~i~Glli~~ 136 (282)
+-..+|+++|.
T Consensus 6 idLAVgvIiG~ 16 (109)
T d2oara1 6 VDLAVAVVIGT 16 (109)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34445555544
No 7
>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}
Probab=3.57 E-value=80 Score=19.03 Aligned_cols=15 Identities=7% Similarity=-0.184 Sum_probs=10.3
Q ss_pred cccccchhhHHHhHHH
Q 023466 3 RIQCNFSLSYELVFWP 18 (282)
Q Consensus 3 ~~~~~~G~~Y~~s~~~ 18 (282)
-+||++|+-|. +--.
T Consensus 11 PVCGsDG~TY~-N~C~ 25 (53)
T d2erwa1 11 PVCGSDGKTYG-NPCM 25 (53)
T ss_dssp CEEETTSCEES-SHHH
T ss_pred cccCCCCCEeC-CHHH
Confidence 36888888887 5443
No 8
>d1p4ea1 a.60.9.1 (A:2-129) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.39 E-value=3.7e+02 Score=18.18 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=25.2
Q ss_pred hhcccHHHHHHHHHHHcCCChh--HHHHHHHHHHHHHHHH
Q 023466 232 QYAVPPALAVGTIIQLFETSES--ECSVILLWTYAVAAFA 269 (282)
Q Consensus 232 ~~a~P~A~~~~~ia~~~~~~~~--~~s~~l~~syl~sivt 269 (282)
..-+||-+.+-.+.++|..... .+|-.-=.+|++..+|
T Consensus 6 lcktppkvlvrqfverferpsgekiascaaeltylcwmit 45 (128)
T d1p4ea1 6 LCKTPPKVLVRQFVERFERPSGEKIASCAAELTYLCWMIT 45 (128)
T ss_dssp HHHSCHHHHHHHHHHTTTTTCHHHHTTCHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhcCCCcchHHHHHHHHHhhheeEe
Confidence 3457999999999999886433 2222333678877665
No 9
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.27 E-value=65 Score=20.39 Aligned_cols=12 Identities=0% Similarity=0.052 Sum_probs=7.4
Q ss_pred ccccccchhhHH
Q 023466 2 RRIQCNFSLSYE 13 (282)
Q Consensus 2 ~~~~~~~G~~Y~ 13 (282)
.++||+||..|-
T Consensus 13 ~~VCg~rGfy~~ 24 (58)
T d2v5pc1 13 QFVCGDRGFYFS 24 (58)
T ss_dssp HHHSTTSCBCCC
T ss_pred HHHHcCCCcccc
Confidence 356777776543
No 10
>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.17 E-value=92 Score=18.43 Aligned_cols=10 Identities=10% Similarity=-0.024 Sum_probs=7.6
Q ss_pred ccccchhhHH
Q 023466 4 IQCNFSLSYE 13 (282)
Q Consensus 4 ~~~~~G~~Y~ 13 (282)
+||++|+-|.
T Consensus 14 VCGsDg~TY~ 23 (48)
T d1lr7a2 14 VCGLDGKTYR 23 (48)
T ss_dssp EEETTSCEES
T ss_pred eECCCCCEec
Confidence 5777787776
Done!