Query 023469
Match_columns 282
No_of_seqs 198 out of 946
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:19:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 3.4E-35 1.2E-39 265.6 21.3 247 1-277 43-295 (342)
2 1yvv_A Amine oxidase, flavin-c 99.9 3E-25 1E-29 199.0 24.7 234 14-277 49-283 (336)
3 3nks_A Protoporphyrinogen oxid 99.8 2.7E-18 9.2E-23 161.1 13.3 187 71-276 226-421 (477)
4 3i6d_A Protoporphyrinogen oxid 99.7 1.5E-16 5E-21 148.5 11.8 183 70-276 226-415 (470)
5 3lov_A Protoporphyrinogen oxid 99.6 5.6E-16 1.9E-20 145.4 11.6 180 70-276 227-412 (475)
6 2ivd_A PPO, PPOX, protoporphyr 99.6 5.6E-16 1.9E-20 145.4 11.4 186 69-276 228-421 (478)
7 2yg5_A Putrescine oxidase; oxi 99.5 5.3E-14 1.8E-18 131.0 13.1 178 71-272 207-387 (453)
8 1s3e_A Amine oxidase [flavin-c 99.5 2E-13 6.8E-18 129.6 15.8 179 71-272 207-390 (520)
9 4dsg_A UDP-galactopyranose mut 99.5 8.4E-14 2.9E-18 131.4 8.9 183 74-278 211-402 (484)
10 2jae_A L-amino acid oxidase; o 99.4 3.6E-13 1.2E-17 126.7 11.8 179 70-273 230-418 (489)
11 1sez_A Protoporphyrinogen oxid 99.4 1.4E-13 4.9E-18 129.9 7.7 185 71-276 235-441 (504)
12 3ka7_A Oxidoreductase; structu 99.4 2.2E-12 7.4E-17 118.9 14.3 182 72-277 189-377 (425)
13 2z3y_A Lysine-specific histone 99.3 4.2E-11 1.4E-15 117.1 17.6 176 69-272 391-582 (662)
14 2xag_A Lysine-specific histone 99.3 5.6E-11 1.9E-15 118.8 16.7 176 69-272 562-753 (852)
15 4gut_A Lysine-specific histone 99.3 7.4E-11 2.5E-15 117.0 17.0 180 69-272 524-713 (776)
16 1b37_A Protein (polyamine oxid 99.3 1.5E-10 5E-15 108.5 17.6 174 75-271 202-394 (472)
17 3nrn_A Uncharacterized protein 99.3 3.5E-11 1.2E-15 111.0 12.3 175 72-278 182-360 (421)
18 2iid_A L-amino-acid oxidase; f 99.3 3.5E-11 1.2E-15 113.3 12.3 179 71-272 233-422 (498)
19 2vvm_A Monoamine oxidase N; FA 99.2 3.1E-11 1.1E-15 113.6 9.3 171 71-271 247-421 (495)
20 4gde_A UDP-galactopyranose mut 99.1 7.4E-11 2.5E-15 111.1 8.9 178 73-277 216-425 (513)
21 3kkj_A Amine oxidase, flavin-c 98.7 7.8E-06 2.7E-10 68.2 24.3 235 14-278 49-284 (336)
22 1rsg_A FMS1 protein; FAD bindi 98.6 8.2E-07 2.8E-11 84.0 15.6 103 77-188 200-313 (516)
23 4dgk_A Phytoene dehydrogenase; 98.5 3.4E-07 1.1E-11 85.9 9.9 99 72-180 214-317 (501)
24 3k7m_X 6-hydroxy-L-nicotine ox 98.5 6.9E-07 2.4E-11 82.1 11.7 95 74-180 202-296 (431)
25 2b9w_A Putative aminooxidase; 98.5 3.2E-07 1.1E-11 84.2 8.6 84 72-170 199-282 (424)
26 3ayj_A Pro-enzyme of L-phenyla 98.1 3.2E-06 1.1E-10 82.8 7.2 108 70-182 338-494 (721)
27 1v0j_A UDP-galactopyranose mut 96.6 0.00039 1.3E-08 63.4 0.8 76 73-180 199-274 (399)
28 2bi7_A UDP-galactopyranose mut 96.5 0.0012 4.1E-08 59.9 2.9 67 73-177 193-260 (384)
29 1i8t_A UDP-galactopyranose mut 96.3 0.0015 5.1E-08 58.9 2.4 72 73-180 189-260 (367)
30 1d5t_A Guanine nucleotide diss 95.0 0.015 5E-07 53.5 3.6 57 71-130 226-285 (433)
31 3p1w_A Rabgdi protein; GDI RAB 94.4 0.057 1.9E-06 50.4 6.2 60 70-130 247-309 (475)
32 2bcg_G Secretory pathway GDP d 93.9 0.033 1.1E-06 51.4 3.5 54 73-130 236-295 (453)
33 3hdq_A UDP-galactopyranose mut 93.5 0.13 4.5E-06 46.7 6.7 92 73-201 217-308 (397)
34 2e1m_B L-glutamate oxidase; L- 92.8 0.069 2.4E-06 40.7 3.0 52 123-182 7-58 (130)
35 3nyc_A D-arginine dehydrogenas 92.7 0.25 8.4E-06 43.5 7.2 38 89-130 167-204 (381)
36 1vg0_A RAB proteins geranylger 92.5 0.18 6.2E-06 48.7 6.3 88 70-181 369-461 (650)
37 3pvc_A TRNA 5-methylaminomethy 91.4 0.24 8.3E-06 48.1 5.9 49 79-130 412-464 (689)
38 2e1m_A L-glutamate oxidase; L- 91.3 0.18 6.1E-06 45.5 4.5 44 69-114 310-353 (376)
39 3ps9_A TRNA 5-methylaminomethy 91.0 0.22 7.5E-06 48.3 5.1 49 79-130 417-468 (676)
40 3dme_A Conserved exported prot 90.7 0.32 1.1E-05 42.5 5.5 49 80-130 151-204 (369)
41 3dje_A Fructosyl amine: oxygen 90.5 0.24 8.4E-06 44.8 4.7 40 88-130 173-216 (438)
42 2uzz_A N-methyl-L-tryptophan o 89.8 0.42 1.4E-05 42.0 5.5 46 80-130 154-199 (372)
43 2vou_A 2,6-dihydroxypyridine h 89.7 0.89 3E-05 40.6 7.7 49 79-130 99-148 (397)
44 3gwf_A Cyclohexanone monooxyge 89.0 0.31 1.1E-05 46.0 4.2 60 71-131 82-143 (540)
45 4a9w_A Monooxygenase; baeyer-v 88.7 0.35 1.2E-05 41.9 4.2 48 80-131 80-128 (357)
46 2xdo_A TETX2 protein; tetracyc 88.7 0.68 2.3E-05 41.4 6.1 50 79-131 128-178 (398)
47 3d1c_A Flavin-containing putat 88.5 0.56 1.9E-05 41.1 5.4 45 83-131 95-139 (369)
48 2x3n_A Probable FAD-dependent 88.3 0.6 2E-05 41.6 5.5 39 90-131 122-162 (399)
49 1ryi_A Glycine oxidase; flavop 88.2 1.1 3.7E-05 39.5 7.1 68 89-179 177-245 (382)
50 4hb9_A Similarities with proba 88.2 0.81 2.8E-05 40.5 6.3 51 79-131 112-162 (412)
51 2ywl_A Thioredoxin reductase r 88.1 0.51 1.7E-05 37.0 4.4 38 88-130 68-105 (180)
52 3v76_A Flavoprotein; structura 87.7 0.56 1.9E-05 42.7 5.0 56 76-135 129-187 (417)
53 2gf3_A MSOX, monomeric sarcosi 87.5 0.61 2.1E-05 41.2 5.0 38 89-130 163-200 (389)
54 2gv8_A Monooxygenase; FMO, FAD 87.5 0.43 1.5E-05 43.5 4.1 46 84-132 123-174 (447)
55 2oln_A NIKD protein; flavoprot 87.5 0.55 1.9E-05 41.8 4.7 47 79-130 157-203 (397)
56 4ap3_A Steroid monooxygenase; 87.4 0.6 2.1E-05 44.1 5.1 51 79-130 102-154 (549)
57 2i0z_A NAD(FAD)-utilizing dehy 86.5 0.68 2.3E-05 42.3 4.8 52 79-133 134-189 (447)
58 1y56_B Sarcosine oxidase; dehy 86.4 0.81 2.8E-05 40.4 5.2 38 89-130 162-200 (382)
59 3uox_A Otemo; baeyer-villiger 85.0 0.3 1E-05 46.2 1.6 53 78-131 89-143 (545)
60 1xdi_A RV3303C-LPDA; reductase 84.6 1.1 3.9E-05 41.4 5.4 42 87-131 234-275 (499)
61 2v3a_A Rubredoxin reductase; a 84.4 1.2 4E-05 39.7 5.2 41 87-130 198-238 (384)
62 3rp8_A Flavoprotein monooxygen 84.0 1 3.4E-05 40.3 4.6 48 81-131 129-177 (407)
63 3lzw_A Ferredoxin--NADP reduct 83.4 1.5 5.2E-05 37.4 5.4 40 88-131 79-119 (332)
64 1w4x_A Phenylacetone monooxyge 83.2 1.2 4E-05 41.9 4.9 51 80-131 98-150 (542)
65 3iwa_A FAD-dependent pyridine 82.6 1.4 4.9E-05 40.3 5.1 45 84-131 210-254 (472)
66 3o0h_A Glutathione reductase; 82.5 1.3 4.3E-05 40.9 4.8 40 89-131 245-284 (484)
67 3ef6_A Toluene 1,2-dioxygenase 82.4 1.1 3.6E-05 40.5 4.1 46 83-131 192-237 (410)
68 2gqf_A Hypothetical protein HI 82.3 1.8 6.2E-05 39.0 5.7 56 77-136 107-169 (401)
69 3s5w_A L-ornithine 5-monooxyge 82.1 1.2 4.1E-05 40.5 4.4 51 78-131 129-188 (463)
70 3lxd_A FAD-dependent pyridine 82.0 1.7 5.7E-05 39.1 5.3 50 79-131 197-247 (415)
71 2gag_B Heterotetrameric sarcos 81.1 2.2 7.6E-05 37.7 5.7 38 89-130 187-225 (405)
72 2zbw_A Thioredoxin reductase; 81.0 1.4 5E-05 37.8 4.3 40 89-131 78-117 (335)
73 3nlc_A Uncharacterized protein 80.4 1.8 6.2E-05 40.9 5.1 50 79-131 220-273 (549)
74 3oc4_A Oxidoreductase, pyridin 80.1 2.5 8.5E-05 38.5 5.8 51 81-135 194-244 (452)
75 1fl2_A Alkyl hydroperoxide red 79.8 2.3 7.9E-05 36.1 5.2 45 86-131 66-111 (310)
76 1m6i_A Programmed cell death p 79.3 2.2 7.7E-05 39.4 5.3 46 83-131 233-278 (493)
77 2yqu_A 2-oxoglutarate dehydrog 79.3 1.5 5.1E-05 40.0 4.0 40 89-131 221-260 (455)
78 3ab1_A Ferredoxin--NADP reduct 78.5 3.3 0.00011 36.0 5.9 41 88-131 86-127 (360)
79 3s5w_A L-ornithine 5-monooxyge 78.4 2.7 9.1E-05 38.2 5.4 40 89-130 329-372 (463)
80 3fg2_P Putative rubredoxin red 77.7 2.2 7.7E-05 38.1 4.7 44 85-131 193-237 (404)
81 1mo9_A ORF3; nucleotide bindin 77.6 2.2 7.5E-05 39.8 4.7 47 88-137 267-318 (523)
82 3f8d_A Thioredoxin reductase ( 77.6 2.9 0.0001 35.4 5.2 40 88-131 82-121 (323)
83 2r9z_A Glutathione amide reduc 77.3 2.3 8E-05 38.9 4.7 41 88-131 219-260 (463)
84 1k0i_A P-hydroxybenzoate hydro 77.1 3.1 0.00011 36.7 5.4 50 80-131 108-159 (394)
85 2e1m_C L-glutamate oxidase; L- 77.0 2.1 7.1E-05 34.1 3.8 80 184-272 8-90 (181)
86 3ihg_A RDME; flavoenzyme, anth 76.6 3 0.0001 38.8 5.4 46 82-131 127-179 (535)
87 2qa2_A CABE, polyketide oxygen 76.6 3 0.0001 38.7 5.3 42 88-131 119-162 (499)
88 2wpf_A Trypanothione reductase 76.2 3.3 0.00011 38.3 5.4 41 88-131 247-288 (495)
89 1fec_A Trypanothione reductase 75.9 2.9 0.0001 38.5 5.0 41 88-131 243-284 (490)
90 1ges_A Glutathione reductase; 75.4 2.9 9.9E-05 38.1 4.8 41 88-131 220-261 (450)
91 4dna_A Probable glutathione re 74.5 3.8 0.00013 37.4 5.3 41 87-131 222-264 (463)
92 3fbs_A Oxidoreductase; structu 74.3 3.6 0.00012 34.4 4.8 38 90-131 71-108 (297)
93 2xve_A Flavin-containing monoo 74.0 2 6.8E-05 39.5 3.3 43 89-131 114-162 (464)
94 2q0l_A TRXR, thioredoxin reduc 73.5 3.9 0.00013 34.6 4.9 41 87-131 70-110 (311)
95 3klj_A NAD(FAD)-dependent dehy 73.2 3.1 0.00011 37.1 4.3 38 89-131 75-112 (385)
96 2eq6_A Pyruvate dehydrogenase 72.6 4 0.00014 37.3 5.0 41 88-131 222-267 (464)
97 2qa1_A PGAE, polyketide oxygen 72.4 3 0.0001 38.6 4.2 42 88-131 118-161 (500)
98 1onf_A GR, grase, glutathione 72.1 4.7 0.00016 37.2 5.4 41 88-131 229-271 (500)
99 3c4n_A Uncharacterized protein 71.9 2.1 7.1E-05 38.3 2.8 39 88-130 184-231 (405)
100 2hqm_A GR, grase, glutathione 71.4 3.6 0.00012 37.8 4.4 41 88-131 238-281 (479)
101 3nix_A Flavoprotein/dehydrogen 70.5 4.6 0.00016 35.8 4.8 40 89-130 119-161 (421)
102 2qae_A Lipoamide, dihydrolipoy 70.5 4.8 0.00017 36.7 5.0 42 87-131 227-272 (468)
103 1zmd_A Dihydrolipoyl dehydroge 70.0 6.5 0.00022 35.9 5.8 41 88-131 232-278 (474)
104 2cul_A Glucose-inhibited divis 69.8 6.4 0.00022 32.1 5.2 37 90-130 83-120 (232)
105 2qcu_A Aerobic glycerol-3-phos 69.3 5.6 0.00019 36.7 5.2 40 89-130 162-205 (501)
106 3itj_A Thioredoxin reductase 1 69.1 6.1 0.00021 33.6 5.2 40 88-131 96-138 (338)
107 3alj_A 2-methyl-3-hydroxypyrid 68.7 6.8 0.00023 34.4 5.5 45 80-131 112-156 (379)
108 1ojt_A Surface protein; redox- 68.5 3.9 0.00013 37.5 3.9 42 87-131 237-282 (482)
109 3fmw_A Oxygenase; mithramycin, 68.2 2.9 9.9E-05 39.6 3.1 40 89-131 161-203 (570)
110 3f8d_A Thioredoxin reductase ( 67.8 7.7 0.00026 32.7 5.5 50 79-130 193-246 (323)
111 3lad_A Dihydrolipoamide dehydr 66.1 6 0.0002 36.1 4.7 41 88-130 233-275 (476)
112 1hyu_A AHPF, alkyl hydroperoxi 65.8 7.1 0.00024 36.3 5.2 44 87-131 278-322 (521)
113 1pj5_A N,N-dimethylglycine oxi 64.8 5.7 0.00019 39.3 4.5 38 89-130 164-202 (830)
114 3cgv_A Geranylgeranyl reductas 64.7 4.2 0.00014 35.7 3.2 40 89-131 115-158 (397)
115 3itj_A Thioredoxin reductase 1 64.4 8.1 0.00028 32.8 5.0 50 79-130 212-266 (338)
116 2bry_A NEDD9 interacting prote 64.2 8.3 0.00028 35.6 5.3 42 89-131 179-226 (497)
117 1zk7_A HGII, reductase, mercur 63.7 5.5 0.00019 36.3 4.0 40 88-131 228-267 (467)
118 2cdu_A NADPH oxidase; flavoenz 63.7 7.5 0.00026 35.2 4.8 42 86-131 201-243 (452)
119 1vdc_A NTR, NADPH dependent th 63.4 5.8 0.0002 33.9 3.9 39 88-131 82-120 (333)
120 3e1t_A Halogenase; flavoprotei 63.4 8.7 0.0003 35.5 5.3 41 89-131 124-168 (512)
121 2weu_A Tryptophan 5-halogenase 62.9 12 0.00041 34.4 6.1 38 89-130 186-225 (511)
122 2a8x_A Dihydrolipoyl dehydroge 62.6 7.1 0.00024 35.5 4.5 41 88-131 224-267 (464)
123 1trb_A Thioredoxin reductase; 62.3 8.1 0.00028 32.7 4.6 39 88-131 74-112 (320)
124 1dxl_A Dihydrolipoamide dehydr 62.3 7.8 0.00027 35.2 4.7 41 88-131 230-275 (470)
125 3atr_A Conserved archaeal prot 62.2 10 0.00034 34.3 5.4 41 89-131 113-158 (453)
126 4b63_A L-ornithine N5 monooxyg 61.5 7 0.00024 36.2 4.3 50 82-131 151-210 (501)
127 2q7v_A Thioredoxin reductase; 61.2 17 0.00058 30.8 6.5 50 79-130 191-244 (325)
128 3axb_A Putative oxidoreductase 61.0 8.5 0.00029 34.6 4.7 40 89-130 194-249 (448)
129 1qo8_A Flavocytochrome C3 fuma 60.8 11 0.00037 35.3 5.5 51 80-133 255-310 (566)
130 2e4g_A Tryptophan halogenase; 60.5 11 0.00038 35.2 5.5 37 90-130 209-247 (550)
131 3r9u_A Thioredoxin reductase; 60.2 10 0.00035 31.7 4.8 50 79-130 186-239 (315)
132 3cgb_A Pyridine nucleotide-dis 59.8 12 0.0004 34.2 5.5 48 82-131 99-148 (480)
133 1y0p_A Fumarate reductase flav 59.8 15 0.0005 34.5 6.2 43 89-133 268-315 (571)
134 3ntd_A FAD-dependent pyridine 59.5 8.8 0.0003 35.8 4.6 53 83-136 199-268 (565)
135 1ebd_A E3BD, dihydrolipoamide 59.2 6.6 0.00023 35.6 3.6 41 88-131 223-266 (455)
136 3vrd_B FCCB subunit, flavocyto 58.5 3.1 0.00011 36.9 1.2 39 89-130 215-253 (401)
137 1y56_A Hypothetical protein PH 58.2 15 0.00051 33.7 5.9 51 76-130 258-308 (493)
138 3ic9_A Dihydrolipoamide dehydr 57.5 17 0.00057 33.4 6.1 39 91-131 229-270 (492)
139 3urh_A Dihydrolipoyl dehydroge 57.3 9 0.00031 35.1 4.2 42 88-131 251-296 (491)
140 3d1c_A Flavin-containing putat 56.5 9.3 0.00032 33.0 4.0 40 89-130 227-267 (369)
141 3h8l_A NADH oxidase; membrane 56.5 6.3 0.00022 35.0 2.9 38 86-130 228-265 (409)
142 3dgh_A TRXR-1, thioredoxin red 56.3 13 0.00044 34.0 5.1 43 88-131 239-285 (483)
143 1q1r_A Putidaredoxin reductase 55.4 10 0.00034 34.2 4.1 43 88-131 203-246 (431)
144 2aqj_A Tryptophan halogenase, 55.4 19 0.00064 33.4 6.1 38 89-130 178-217 (538)
145 3i3l_A Alkylhalidase CMLS; fla 55.3 12 0.00041 35.5 4.8 42 88-130 140-183 (591)
146 1d4d_A Flavocytochrome C fumar 55.3 17 0.00058 34.1 5.8 45 89-135 268-317 (572)
147 2q7v_A Thioredoxin reductase; 54.2 14 0.00046 31.4 4.6 40 88-131 77-119 (325)
148 2pyx_A Tryptophan halogenase; 53.6 21 0.0007 33.0 6.0 39 89-131 189-229 (526)
149 2gqw_A Ferredoxin reductase; f 53.3 15 0.0005 32.8 4.8 42 83-131 194-235 (408)
150 2q0l_A TRXR, thioredoxin reduc 53.1 22 0.00076 29.7 5.8 50 79-130 182-236 (311)
151 2gqw_A Ferredoxin reductase; f 53.0 12 0.0004 33.5 4.1 40 87-131 70-109 (408)
152 1rp0_A ARA6, thiazole biosynth 52.7 16 0.00056 30.7 4.8 49 80-130 124-186 (284)
153 3ics_A Coenzyme A-disulfide re 52.0 12 0.00041 35.1 4.2 40 87-131 239-278 (588)
154 2bc0_A NADH oxidase; flavoprot 51.2 21 0.00072 32.6 5.7 44 84-131 244-287 (490)
155 4g6h_A Rotenone-insensitive NA 50.8 13 0.00043 34.5 4.0 51 78-130 274-327 (502)
156 2r0c_A REBC; flavin adenine di 50.7 18 0.00061 33.7 5.2 37 93-131 152-192 (549)
157 1nhp_A NADH peroxidase; oxidor 50.4 19 0.00064 32.4 5.1 45 83-131 198-242 (447)
158 1trb_A Thioredoxin reductase; 50.0 30 0.001 28.9 6.2 41 88-130 196-242 (320)
159 2a87_A TRXR, TR, thioredoxin r 49.9 19 0.00064 30.7 4.9 39 88-131 83-122 (335)
160 3c96_A Flavin-containing monoo 49.6 10 0.00034 33.7 3.1 48 81-131 113-165 (410)
161 4b1b_A TRXR, thioredoxin reduc 49.6 16 0.00055 34.3 4.6 40 88-130 275-314 (542)
162 3ics_A Coenzyme A-disulfide re 49.5 18 0.00062 33.9 5.0 47 83-131 100-148 (588)
163 3l8k_A Dihydrolipoyl dehydroge 49.4 10 0.00035 34.5 3.2 51 79-131 214-268 (466)
164 3cgb_A Pyridine nucleotide-dis 49.3 17 0.00057 33.2 4.6 40 88-131 239-278 (480)
165 3ef6_A Toluene 1,2-dioxygenase 48.5 12 0.00042 33.3 3.5 38 89-131 70-107 (410)
166 4at0_A 3-ketosteroid-delta4-5a 48.5 20 0.0007 32.9 5.1 54 80-135 203-264 (510)
167 3ntd_A FAD-dependent pyridine 48.1 12 0.00042 34.7 3.6 47 83-131 65-113 (565)
168 3iwa_A FAD-dependent pyridine 47.9 18 0.00063 32.8 4.6 47 83-131 73-121 (472)
169 2zbw_A Thioredoxin reductase; 47.7 20 0.0007 30.3 4.7 41 88-130 203-247 (335)
170 1v59_A Dihydrolipoamide dehydr 47.6 15 0.0005 33.5 3.9 44 87-131 235-283 (478)
171 3dk9_A Grase, GR, glutathione 47.1 29 0.00099 31.5 5.9 42 88-131 240-289 (478)
172 1xhc_A NADH oxidase /nitrite r 46.3 10 0.00035 33.3 2.6 37 89-131 73-109 (367)
173 1q1r_A Putidaredoxin reductase 45.4 17 0.00058 32.7 4.0 39 88-131 72-110 (431)
174 3cty_A Thioredoxin reductase; 44.4 23 0.00078 29.9 4.5 39 88-131 84-122 (319)
175 2bc0_A NADH oxidase; flavoprot 44.4 13 0.00045 34.0 3.1 41 88-131 104-145 (490)
176 1fl2_A Alkyl hydroperoxide red 44.1 43 0.0015 27.8 6.2 48 81-130 185-237 (310)
177 2rgh_A Alpha-glycerophosphate 44.0 21 0.00073 33.5 4.5 41 88-130 200-245 (571)
178 3da1_A Glycerol-3-phosphate de 43.9 17 0.00058 34.1 3.8 49 80-130 171-227 (561)
179 1m6i_A Programmed cell death p 43.4 12 0.00041 34.4 2.6 38 89-131 103-140 (493)
180 3lzw_A Ferredoxin--NADP reduct 43.4 41 0.0014 28.1 6.0 50 78-130 192-245 (332)
181 3kd9_A Coenzyme A disulfide re 42.8 12 0.0004 33.9 2.4 43 85-131 68-110 (449)
182 3lxd_A FAD-dependent pyridine 42.5 16 0.00054 32.5 3.2 39 88-131 77-115 (415)
183 1lvl_A Dihydrolipoamide dehydr 40.4 25 0.00084 31.8 4.2 40 88-131 224-264 (458)
184 3dgz_A Thioredoxin reductase 2 39.7 32 0.0011 31.3 4.9 43 88-131 237-283 (488)
185 2zxi_A TRNA uridine 5-carboxym 38.9 36 0.0012 32.6 5.2 48 80-131 128-176 (637)
186 3hyw_A Sulfide-quinone reducta 38.4 24 0.00081 31.7 3.7 36 89-130 69-104 (430)
187 3h28_A Sulfide-quinone reducta 37.8 20 0.00068 32.1 3.1 45 81-130 205-251 (430)
188 1vdc_A NTR, NADPH dependent th 37.7 66 0.0022 27.0 6.4 50 79-130 198-254 (333)
189 3fbs_A Oxidoreductase; structu 37.7 28 0.00096 28.6 3.9 36 88-130 186-221 (297)
190 3f7w_A Putative fructosamine-3 37.6 28 0.00095 29.1 3.9 38 77-120 1-41 (288)
191 2a87_A TRXR, TR, thioredoxin r 37.4 41 0.0014 28.5 5.0 49 80-130 195-247 (335)
192 2gmh_A Electron transfer flavo 37.2 53 0.0018 30.8 6.1 50 79-131 144-213 (584)
193 3cty_A Thioredoxin reductase; 37.1 69 0.0024 26.7 6.4 47 81-130 196-247 (319)
194 4eqs_A Coenzyme A disulfide re 36.9 34 0.0012 30.7 4.6 47 78-131 190-236 (437)
195 3hyw_A Sulfide-quinone reducta 36.7 15 0.0005 33.1 2.0 47 80-130 204-251 (430)
196 4fk1_A Putative thioredoxin re 36.6 54 0.0019 27.3 5.6 37 93-131 77-113 (304)
197 3r9u_A Thioredoxin reductase; 36.3 50 0.0017 27.3 5.4 40 85-131 71-114 (315)
198 2e5v_A L-aspartate oxidase; ar 35.8 22 0.00074 32.5 3.1 47 79-131 123-172 (472)
199 1nhp_A NADH peroxidase; oxidor 35.4 39 0.0013 30.2 4.7 41 89-131 69-111 (447)
200 3oc4_A Oxidoreductase, pyridin 34.1 27 0.00093 31.4 3.4 40 89-131 71-111 (452)
201 3ces_A MNMG, tRNA uridine 5-ca 33.6 38 0.0013 32.6 4.4 47 81-131 130-177 (651)
202 3ab1_A Ferredoxin--NADP reduct 32.8 71 0.0024 27.3 5.9 40 89-130 215-258 (360)
203 3sx6_A Sulfide-quinone reducta 31.6 53 0.0018 29.3 4.9 38 88-131 71-108 (437)
204 3k30_A Histamine dehydrogenase 31.2 29 0.001 33.3 3.3 44 81-130 573-619 (690)
205 3cp8_A TRNA uridine 5-carboxym 30.5 45 0.0016 32.0 4.4 48 80-131 122-170 (641)
206 3kd9_A Coenzyme A disulfide re 29.8 54 0.0018 29.3 4.7 44 82-131 197-240 (449)
207 2dkh_A 3-hydroxybenzoate hydro 29.3 68 0.0023 30.4 5.5 48 81-131 147-207 (639)
208 2cdu_A NADPH oxidase; flavoenz 28.6 39 0.0013 30.3 3.4 41 88-131 70-113 (452)
209 3sx6_A Sulfide-quinone reducta 27.9 54 0.0018 29.2 4.3 47 79-130 211-264 (437)
210 2wdq_A Succinate dehydrogenase 25.3 1.1E+02 0.0036 28.8 5.9 48 81-131 149-202 (588)
211 1xhc_A NADH oxidase /nitrite r 25.2 36 0.0012 29.7 2.5 37 86-130 193-229 (367)
212 1ps9_A 2,4-dienoyl-COA reducta 24.9 73 0.0025 30.4 4.8 46 80-130 577-623 (671)
213 1y56_A Hypothetical protein PH 24.5 67 0.0023 29.3 4.3 50 79-130 161-214 (493)
214 1kf6_A Fumarate reductase flav 23.4 82 0.0028 29.7 4.8 41 89-131 147-193 (602)
215 2h88_A Succinate dehydrogenase 23.4 1E+02 0.0036 29.2 5.5 50 80-131 156-213 (621)
216 3h8l_A NADH oxidase; membrane 22.7 91 0.0031 27.2 4.7 39 88-131 68-109 (409)
217 3fg2_P Putative rubredoxin red 22.6 59 0.002 28.6 3.4 37 89-131 70-106 (404)
218 1ebd_A E3BD, dihydrolipoamide 22.4 78 0.0027 28.3 4.3 41 85-131 100-141 (455)
219 3l8k_A Dihydrolipoyl dehydroge 22.1 91 0.0031 28.0 4.7 44 82-131 95-140 (466)
220 2v3a_A Rubredoxin reductase; a 22.1 41 0.0014 29.3 2.3 42 84-131 68-109 (384)
221 4eqs_A Coenzyme A disulfide re 21.5 79 0.0027 28.2 4.1 45 84-130 65-111 (437)
222 1n4w_A CHOD, cholesterol oxida 20.5 1E+02 0.0035 28.1 4.7 50 90-141 236-294 (504)
223 1coy_A Cholesterol oxidase; ox 20.4 94 0.0032 28.4 4.4 40 90-131 241-289 (507)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=265.60 Aligned_cols=247 Identities=19% Similarity=0.307 Sum_probs=204.5
Q ss_pred CCccccccCCCCceecccCCCceecCCh---hHHHHHHHHHhCCceeeccCcceeeeccCceeeecccCCCCccEEeCCC
Q 023469 1 MSQRRETSEDGNEMLFDHGAPFFTVTNN---DVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPG 77 (282)
Q Consensus 1 mstrr~~~~~~~~~~~DhGAqyft~~~~---~f~~~v~~~~~~g~v~~W~~~~~~~~~~~~~~~~~~~~~~~~~yvg~~G 77 (282)
|+|++. +.+..+.+|||++||+++++ .|.++++.|.+.|++.+|........ ..+...+|+..+|
T Consensus 43 ~~~~~~--~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~g 110 (342)
T 3qj4_A 43 MTTACS--PHNPQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMV----------MKEGDCNFVAPQG 110 (342)
T ss_dssp GCEEEC--SSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSCEETCC----------C--CCEEEECTTC
T ss_pred eeeeec--CCCCCceEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchhhccee----------ccCCccceecCCC
Confidence 355555 44445689999999999987 78899999999999999987533211 1234678999999
Q ss_pred chHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCCcchHH
Q 023469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDL 157 (282)
Q Consensus 78 m~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~~~~~ 157 (282)
|++++++|++.++.+|+++++|.+|++ .+++|.|.+++|+.+ .||.||+| +|++++++||....+ .+.++.
T Consensus 111 ~~~l~~~l~~~~g~~i~~~~~V~~i~~--~~~~~~v~~~~g~~~-~ad~vV~A---~p~~~~~~ll~~~~~---~l~~~~ 181 (342)
T 3qj4_A 111 ISSIIKHYLKESGAEVYFRHRVTQINL--RDDKWEVSKQTGSPE-QFDLIVLT---MPVPEILQLQGDITT---LISECQ 181 (342)
T ss_dssp TTHHHHHHHHHHTCEEESSCCEEEEEE--CSSSEEEEESSSCCE-EESEEEEC---SCHHHHTTCBSTHHH---HSCHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCEEEEEECCCCEE-EcCEEEEC---CCHHHHHHHhccccc---ccCHHH
Confidence 999999999877889999999999998 778899998888654 79999999 999999999851100 122356
Q ss_pred HHHhccCCCcceeEEEEeccCCCC-CCCccceEecCCCceEEEeeCCCCCCCC--CCCCeEEEEeCHHHHHHhHhhcCCC
Q 023469 158 AVKLEEIPVNPCFALMLAFSEPLS-SIPVKGFSFQDSEVLSWAHCDSSKPGRS--ANSERWVLHSTADYARTVIAQTGLQ 234 (282)
Q Consensus 158 ~~~l~~v~~~p~~~v~l~~~~~~~-~~~~~g~~~~~~~~l~wi~~~sskpgr~--~~~~~~v~~~~~~~s~~~~~~~~~~ 234 (282)
.+.+++++|.||++|++.|+++.+ ..+++|+++++++.++|++++|+||||. +.+.+||+|+++.|+.++++.
T Consensus 182 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~---- 257 (342)
T 3qj4_A 182 RQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEH---- 257 (342)
T ss_dssp HHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTS----
T ss_pred HHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcC----
Confidence 788999999999999999998643 2678999887766799999999999975 234589999999999999887
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCcccccc
Q 023469 235 KPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNIT 277 (282)
Q Consensus 235 ~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~~ 277 (282)
+++++.+.++++|+++++..+.|.++++|||+||+|..
T Consensus 258 -----~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~ 295 (342)
T 3qj4_A 258 -----SIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTN 295 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSS
T ss_pred -----CHHHHHHHHHHHHHHhccCCCCCceeeecccccccccc
Confidence 89999999999999998888899999999999999976
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.94 E-value=3e-25 Score=198.96 Aligned_cols=234 Identities=28% Similarity=0.550 Sum_probs=195.9
Q ss_pred eecccCCCceecCChhHHHHHHHHHhCCceeeccCcceeeeccCceeeecccCCCCccEEeCCCchHHHHHHhcCCCCee
Q 023469 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (282)
Q Consensus 14 ~~~DhGAqyft~~~~~f~~~v~~~~~~g~v~~W~~~~~~~~~~~~~~~~~~~~~~~~~yvg~~Gm~~l~~~La~~l~~~v 93 (282)
..+|+|+++|+..++.|.++++.|...+.+..|...+..++. +.+.. ......+|++.+||..+.++|++ +++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~l~~--g~~i 122 (336)
T 1yvv_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHA--GRLSP--SPDEQVRWVGKPGMSAITRAMRG--DMPV 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESS--SBCCC--CCTTSCEEEESSCTHHHHHHHHT--TCCE
T ss_pred CeEecCCCeEecCCHHHHHHHHHHHhCCCeeeccccceeccC--ccccc--CCCCCccEEcCccHHHHHHHHHc--cCcE
Confidence 479999999999999999999999999999999987665542 22221 23456789999999999999998 5579
Q ss_pred EcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCCcchHHHHHhccCCCcceeEEE
Q 023469 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (282)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~~~~~~~~l~~v~~~p~~~v~ 173 (282)
+++++|.+|++ .+++|.|++++|+....+|.||+| .|++.+.+++. ..+.+...+..++|.+|++++
T Consensus 123 ~~~~~v~~i~~--~~~~~~v~~~~g~~~~~a~~vV~a---~g~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~ 189 (336)
T 1yvv_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLLA--------AAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESEEEEC---SCHHHHGGGGT--------TCHHHHHHHTTCCEEEEEEEE
T ss_pred EecCEEEEEEE--eCCEEEEEeCCCcCccccCEEEEc---CCHHHHHHhhc--------cCHHHHHHHhhcCccceeEEE
Confidence 99999999997 778899998888754358999999 89999888874 235677888999999999999
Q ss_pred EeccCCCCCCCccceEecCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHH
Q 023469 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQ 253 (282)
Q Consensus 174 l~~~~~~~~~~~~g~~~~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~ 253 (282)
+.|+++.+ .+..++++++ .++.|++++++||++.+.+.+||++.+++|+.++.+. +++++.+.++++|.
T Consensus 190 ~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~l~~~l~ 258 (336)
T 1yvv_A 190 LAFETPLQ-TPMQGCFVQD-SPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDA---------SREQVIEHLHGAFA 258 (336)
T ss_dssp EEESSCCS-CCCCEEEECS-SSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTS---------CHHHHHHHHHHHHH
T ss_pred EEecCCCC-CCCCeEEeCC-CceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhC---------CHHHHHHHHHHHHH
Confidence 99999865 5677876654 5899999999999987633589999999999988776 88999999999999
Q ss_pred hcCC-CCCCcceeeeeccCcccccc
Q 023469 254 GTGL-SIPLPIFRKAHRWYRRSNIT 277 (282)
Q Consensus 254 ~l~~-~~~~P~~~~~~rW~~A~P~~ 277 (282)
++++ ..+.|.+..++||+|++|..
T Consensus 259 ~~lg~~~~~p~~~~~~rw~~a~~~~ 283 (336)
T 1yvv_A 259 ELIDCTMPAPVFSLAHRWLYARPAG 283 (336)
T ss_dssp TTCSSCCCCCSEEEEEEEEEEEESS
T ss_pred HHhCCCCCCCcEEEccccCccCCCC
Confidence 8876 44568999999999998875
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.76 E-value=2.7e-18 Score=161.05 Aligned_cols=187 Identities=16% Similarity=0.100 Sum_probs=144.9
Q ss_pred cEEeCCCchHHHHHHhcCC---CCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecCCCCCcchhhhhcCCC
Q 023469 71 KYVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l---~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p 146 (282)
.|...+||+.|+++|++.+ |++|+++++|++|++ .+++ |.|.++++ .+ .||+||+| +|++.+..||.
T Consensus 226 ~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~--~~~~~~~v~~~~~-~~-~ad~vv~a---~p~~~~~~ll~-- 296 (477)
T 3nks_A 226 QWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSL--QAEGRWKVSLRDS-SL-EADHVISA---IPASVLSELLP-- 296 (477)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE--CGGGCEEEECSSC-EE-EESEEEEC---SCHHHHHHHSC--
T ss_pred EEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCceEEEEECCe-EE-EcCEEEEC---CCHHHHHHhcc--
Confidence 4778999999999999865 679999999999997 5555 99987544 43 79999999 99999999975
Q ss_pred CCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCccceEecC---CCceEEEeeCCCCCCCC--CCCCeEEEEeCH
Q 023469 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD---SEVLSWAHCDSSKPGRS--ANSERWVLHSTA 221 (282)
Q Consensus 147 ~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~~~~~---~~~l~wi~~~sskpgr~--~~~~~~v~~~~~ 221 (282)
...+++.+.+.+++|.+++++++.|+++.+..+..|++++. ..+++|++.++..|++. +....++++.+.
T Consensus 297 -----~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 297 -----AEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp -----GGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECH
T ss_pred -----ccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECC
Confidence 34567788899999999999999999986533445777764 33678875444336653 323456788888
Q ss_pred HHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccc
Q 023469 222 DYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNI 276 (282)
Q Consensus 222 ~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~ 276 (282)
.|...+.+.. .+.+++++++.++++|+++++..+.|.+..++||++|+|.
T Consensus 372 ~~~~~~~~~~-----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~ 421 (477)
T 3nks_A 372 SWLQTLEASG-----CVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQ 421 (477)
T ss_dssp HHHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEEC
T ss_pred cccccccccc-----CCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCC
Confidence 8887775320 0127899999999999998766678999999999999986
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.68 E-value=1.5e-16 Score=148.48 Aligned_cols=183 Identities=10% Similarity=0.120 Sum_probs=136.2
Q ss_pred ccEEeCCCchHHHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCC
Q 023469 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~ 148 (282)
..+...+||++|+++|++.+. .+|+++++|.+|++ .+++|.|.+++|+.+ .||+||+| +|++.+..++..+
T Consensus 226 ~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g~~~-~ad~vi~a---~p~~~~~~l~~~~-- 297 (470)
T 3i6d_A 226 QFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSH--SGSCYSLELDNGVTL-DADSVIVT---APHKAAAGMLSEL-- 297 (470)
T ss_dssp -EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEE--CSSSEEEEESSSCEE-EESEEEEC---SCHHHHHHHTTTS--
T ss_pred eEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEE--cCCeEEEEECCCCEE-ECCEEEEC---CCHHHHHHHcCCc--
Confidence 445678999999999999886 58999999999997 677899999888654 79999999 9999999987521
Q ss_pred CCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCC--ccceEecCCCc--eEEEeeCCCC-CCCCCCC-CeEEEEeCHH
Q 023469 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP--VKGFSFQDSEV--LSWAHCDSSK-PGRSANS-ERWVLHSTAD 222 (282)
Q Consensus 149 ~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~--~~g~~~~~~~~--l~wi~~~ssk-pgr~~~~-~~~v~~~~~~ 222 (282)
.+.+.++.++|.++.++++.|+++.+..+ ..|+++++.+. +.-+.++|.+ +++.|.+ ..+++..+..
T Consensus 298 -------~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~ 370 (470)
T 3i6d_A 298 -------PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKA 370 (470)
T ss_dssp -------TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCS
T ss_pred -------hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCC
Confidence 23567889999999999999999875433 44666765433 1112222222 3333322 2345555555
Q ss_pred HHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccc
Q 023469 223 YARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNI 276 (282)
Q Consensus 223 ~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~ 276 (282)
++..+.+. +++++.+.++++|+++++....|.+..++||++++|.
T Consensus 371 ~~~~~~~~---------~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~ 415 (470)
T 3i6d_A 371 GDESIVDL---------SDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQ 415 (470)
T ss_dssp SCCGGGTS---------CHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEE
T ss_pred CCccccCC---------CHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCC
Confidence 55444444 7899999999999999877778999999999999874
No 5
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.65 E-value=5.6e-16 Score=145.37 Aligned_cols=180 Identities=11% Similarity=0.108 Sum_probs=133.2
Q ss_pred ccEEeCCCchHHHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCC
Q 023469 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~ 148 (282)
..+...+||++|+++|++.+. .+|+++++|++|++ .+++|.|.+.+| .+ .||+||+| +|++.+..++..+
T Consensus 227 ~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g-~~-~ad~vV~a---~p~~~~~~ll~~~-- 297 (475)
T 3lov_A 227 QFLSLETGLESLIERLEEVLERSEIRLETPLLAISR--EDGRYRLKTDHG-PE-YADYVLLT---IPHPQVVQLLPDA-- 297 (475)
T ss_dssp SEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEE--ETTEEEEECTTC-CE-EESEEEEC---SCHHHHHHHCTTS--
T ss_pred cEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEE--eCCEEEEEECCC-eE-ECCEEEEC---CCHHHHHHHcCcc--
Confidence 456779999999999999886 68999999999997 667899998888 43 89999999 9999999987521
Q ss_pred CCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCc--cceEecCCCc--eEEEeeCCCC-CCCCCCCCeEEEEeCHHH
Q 023469 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV--KGFSFQDSEV--LSWAHCDSSK-PGRSANSERWVLHSTADY 223 (282)
Q Consensus 149 ~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~--~g~~~~~~~~--l~wi~~~ssk-pgr~~~~~~~v~~~~~~~ 223 (282)
+ + +.++.++|.++.++++.|+++. ..+. .|++++..+. +..+.++|.+ |++.|....+.+..+..+
T Consensus 298 ------~-~-~~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~ 368 (475)
T 3lov_A 298 ------H-L-PELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPG 368 (475)
T ss_dssp ------C-C-HHHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTT
T ss_pred ------C-H-HHHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCC
Confidence 1 1 6678999999999999999986 3344 4566655433 2222233322 333332123344445444
Q ss_pred HHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccc
Q 023469 224 ARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNI 276 (282)
Q Consensus 224 s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~ 276 (282)
+..+.+. +++++++.++++|+++++....|.+..++||++++|.
T Consensus 369 ~~~~~~~---------~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~ 412 (475)
T 3lov_A 369 NDHLVHE---------SDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPA 412 (475)
T ss_dssp BCGGGGS---------CHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEEC
T ss_pred CCcccCC---------CHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCC
Confidence 4444444 7899999999999998766678999999999999874
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.64 E-value=5.6e-16 Score=145.35 Aligned_cols=186 Identities=16% Similarity=0.128 Sum_probs=138.1
Q ss_pred CccEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc---cCCCccccccEEEecCCCCCcchhhhhcCC
Q 023469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQSLGQFNGVVASDKNVVSPRFRDVTGR 145 (282)
Q Consensus 69 ~~~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~---~~G~~~~~~d~VVla~~~~pa~~~~~ll~~ 145 (282)
...|..++||++|+++|++.++.+|+++++|.+|.. .+++|.|.+ .+|+.+ .||+||+| +|++.+..|+.
T Consensus 228 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~~v~~~~~~~g~~~-~ad~vV~a---~~~~~~~~ll~- 300 (478)
T 2ivd_A 228 GALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAR--EDGGWRLIIEEHGRRAEL-SVAQVVLA---APAHATAKLLR- 300 (478)
T ss_dssp CCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEEC--C--CCEEEEEETTEEEEE-ECSEEEEC---SCHHHHHHHHT-
T ss_pred ccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEe--cCCeEEEEEeecCCCceE-EcCEEEEC---CCHHHHHHHhh-
Confidence 456778999999999999988778999999999997 666799987 566553 79999999 99999988874
Q ss_pred CCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCC-CccceEecC--CCceEEEeeCCCC-CCCCCCC-CeEEEEeC
Q 023469 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVKGFSFQD--SEVLSWAHCDSSK-PGRSANS-ERWVLHST 220 (282)
Q Consensus 146 p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~-~~~g~~~~~--~~~l~wi~~~ssk-pgr~~~~-~~~v~~~~ 220 (282)
.+.++..+.+++++|.+++++++.|+++.+.. ...|++++. ...+.++.++|++ |++.|.+ .+++++.+
T Consensus 301 ------~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 374 (478)
T 2ivd_A 301 ------PLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVG 374 (478)
T ss_dssp ------TTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEE
T ss_pred ------ccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeC
Confidence 34456677889999999999999999876433 233445532 2234455566554 5554433 35666666
Q ss_pred HHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccc
Q 023469 221 ADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNI 276 (282)
Q Consensus 221 ~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~ 276 (282)
..++..+.+. +++++.+.++++|+++++....|....+++|.+++|.
T Consensus 375 ~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~ 421 (478)
T 2ivd_A 375 GARQPGLVEQ---------DEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQ 421 (478)
T ss_dssp CTTCGGGGGS---------CHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBC
T ss_pred CcCCccccCC---------CHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccC
Confidence 5554333333 7889999999999998766567888899999999874
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.53 E-value=5.3e-14 Score=130.97 Aligned_cols=178 Identities=10% Similarity=0.139 Sum_probs=133.3
Q ss_pred cEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCC
Q 023469 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~ 149 (282)
.|...+||++|+++|++.++.+|+++++|.+|.+ .+++ |.|.+ +|+.+ .+|+||+| +|++.+..++-.|
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~v~v~~-~~~~~-~ad~VI~a---~p~~~~~~l~~~p--- 276 (453)
T 2yg5_A 207 DKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKW--NESGATVLAD-GDIRV-EASRVILA---VPPNLYSRISYDP--- 276 (453)
T ss_dssp CEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEE--ETTEEEEEET-TTEEE-EEEEEEEC---SCGGGGGGSEEES---
T ss_pred eEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEE--eCCceEEEEE-CCeEE-EcCEEEEc---CCHHHHhcCEeCC---
Confidence 4677899999999999988888999999999997 5667 99886 55444 79999999 9999887775211
Q ss_pred CCCcchHHHHHhccCCCcceeEEEEeccCCCCC-CCccceEecCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHHhH
Q 023469 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVI 228 (282)
Q Consensus 150 ~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~-~~~~g~~~~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~~~ 228 (282)
.+.+...+.++.++|.++.++++.|+++.+. .++.|.++....++.++.+.+ +|.... .+++.+.....+..+.
T Consensus 277 --~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~--~~l~~~~~~~~~~~~~ 351 (453)
T 2yg5_A 277 --PLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNT-NHEDDR--GTLVAFVSDEKADAMF 351 (453)
T ss_dssp --CCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECC-CTTCSS--EEEEEEEEHHHHHHHH
T ss_pred --CCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCC-CCCCCC--CEEEEEeccHHHHHHh
Confidence 2334566778899999999999999998653 234555554555677775444 443221 4677777777766655
Q ss_pred hhcCCCCCChhhHHHHHHHHHHHHHhcCCC-CCCcceeeeeccCc
Q 023469 229 AQTGLQKPSEATLKKVAEEMFQEFQGTGLS-IPLPIFRKAHRWYR 272 (282)
Q Consensus 229 ~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~-~~~P~~~~~~rW~~ 272 (282)
+. +++++++.+++.|+++++. ...|....+++|..
T Consensus 352 ~~---------~~~~~~~~~l~~L~~~~~~~~~~p~~~~~~~W~~ 387 (453)
T 2yg5_A 352 EL---------SAEERKATILASLARYLGPKAEEPVVYYESDWGS 387 (453)
T ss_dssp HS---------CHHHHHHHHHHHHHHHHCGGGGCCSEEEECCTTT
T ss_pred cC---------CHHHHHHHHHHHHHHHhCccCCCccEEEEeecCC
Confidence 54 7789999999999987653 35788889999973
No 8
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.52 E-value=2e-13 Score=129.63 Aligned_cols=179 Identities=12% Similarity=0.120 Sum_probs=132.3
Q ss_pred cEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCC
Q 023469 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~ 150 (282)
.+...+||++|+++|++.++.+|+++++|.+|+. .+++|.|.+.+|+.+ .||+||+| +|+..+..++-.|
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~VI~a---~p~~~l~~l~~~p---- 276 (520)
T 1s3e_A 207 ERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ--TRENVLVETLNHEMY-EAKYVISA---IPPTLGMKIHFNP---- 276 (520)
T ss_dssp SEEETTCTHHHHHHHHHHHGGGEESSCCEEEEEC--SSSSEEEEETTSCEE-EESEEEEC---SCGGGGGGSEEES----
T ss_pred eEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEE--CCCeEEEEECCCeEE-EeCEEEEC---CCHHHHcceeeCC----
Confidence 4677899999999999988888999999999997 677899998888654 79999999 9999888775212
Q ss_pred CCcchHHHHHhccCCCcceeEEEEeccCCCCC-CCccceEe--cCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHHh
Q 023469 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSF--QDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTV 227 (282)
Q Consensus 151 ~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~-~~~~g~~~--~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~~ 227 (282)
.+.+...+.++.++|.++.++++.|+++.+. .++.|+.+ ....++.++.+.+..++.. ..++.......+...
T Consensus 277 -~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~---~~l~~~~~~~~a~~~ 352 (520)
T 1s3e_A 277 -PLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNY---AAIMGFILAHKARKL 352 (520)
T ss_dssp -CCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCS---CEEEEEEETHHHHHH
T ss_pred -CCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCC---CEEEEEccchhhhhh
Confidence 2344566788999999999999999998753 23445544 3344677665443333322 345555555444444
Q ss_pred HhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccCc
Q 023469 228 IAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWYR 272 (282)
Q Consensus 228 ~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~~ 272 (282)
.+. +++++++.+++.|+++++. ...|.....++|..
T Consensus 353 ~~~---------~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~ 390 (520)
T 1s3e_A 353 ARL---------TKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCE 390 (520)
T ss_dssp TTS---------CHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGG
T ss_pred hcC---------CHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCC
Confidence 333 7789999999999998653 35788999999964
No 9
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.47 E-value=8.4e-14 Score=131.44 Aligned_cols=183 Identities=9% Similarity=0.044 Sum_probs=130.9
Q ss_pred eCCCchHHHHHHhcCCCC-eeEcc--eeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCC
Q 023469 74 GVPGMNSICKALCHQPGV-ESKFG--VGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150 (282)
Q Consensus 74 g~~Gm~~l~~~La~~l~~-~v~~~--~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~ 150 (282)
-.+||++|+++|++.++. +|+++ ++|.+|.+ .+++|.+ .+|+.+ .||+||+| +|++.+..++....+
T Consensus 211 ~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~--~~~~v~~--~~G~~~-~ad~VI~a---~p~~~~~~ll~~~~~-- 280 (484)
T 4dsg_A 211 QRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDA--DAKTITF--SNGEVV-SYDYLIST---VPFDNLLRMTKGTGF-- 280 (484)
T ss_dssp SSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEET--TTTEEEE--TTSCEE-ECSEEEEC---SCHHHHHHHEECSSC--
T ss_pred cCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEe--cCCEEEE--CCCCEE-ECCEEEEC---CCHHHHHHHhhccCC--
Confidence 358999999999998864 79999 56999997 6667765 567553 79999999 999999999851000
Q ss_pred CCcchHHHHHhccCCCcceeEEEEeccCCCCC--CCccceEecCCC-ceEEEeeCCCC-CCCCCCCCeEEEEeCHHHHHH
Q 023469 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSE-VLSWAHCDSSK-PGRSANSERWVLHSTADYART 226 (282)
Q Consensus 151 ~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~--~~~~g~~~~~~~-~l~wi~~~ssk-pgr~~~~~~~v~~~~~~~s~~ 226 (282)
.+.++..+.++.++|.++.++.++|+++... .+..++++++.+ ++..+..-|++ |++.|.+ .+++.....++ .
T Consensus 281 -~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g-~~~l~~e~~~~-~ 357 (484)
T 4dsg_A 281 -KGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEG-HWSLMLEVSES-K 357 (484)
T ss_dssp -TTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTT-EEEEEEEEEEB-T
T ss_pred -CCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCC-eEEEEEEEecC-c
Confidence 1345777889999999999999999987421 356777777643 45566666666 7776643 44443321111 1
Q ss_pred hHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCC-Cc-ceeeeeccCccccccc
Q 023469 227 VIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIP-LP-IFRKAHRWYRRSNITC 278 (282)
Q Consensus 227 ~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~-~P-~~~~~~rW~~A~P~~~ 278 (282)
..+. +++++++.++++|.++++..+ .| ....++||.+++|...
T Consensus 358 ~~~~---------~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~ 402 (484)
T 4dsg_A 358 YKPV---------NHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPF 402 (484)
T ss_dssp TBCC---------CTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCB
T ss_pred CCcC---------CHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCC
Confidence 2222 678999999999999865433 34 3457999999999864
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.45 E-value=3.6e-13 Score=126.68 Aligned_cols=179 Identities=15% Similarity=0.054 Sum_probs=129.8
Q ss_pred ccEEeCCCchHHHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccCC---CccccccEEEecCCCCCcchhhhhcCC
Q 023469 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDG---QSLGQFNGVVASDKNVVSPRFRDVTGR 145 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G---~~~~~~d~VVla~~~~pa~~~~~ll~~ 145 (282)
..|..++||++|+++|++.++ .+|+++++|++|++ .+++|.|.+.+| +. ..||+||+| +|+..+..++.
T Consensus 230 ~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~~~-~~ad~vI~a---~p~~~l~~l~~- 302 (489)
T 2jae_A 230 MMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKN--VSEGVTVEYTAGGSKKS-ITADYAICT---IPPHLVGRLQN- 302 (489)
T ss_dssp SEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEE--ETTEEEEEEEETTEEEE-EEESEEEEC---SCHHHHTTSEE-
T ss_pred cEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEE--cCCeEEEEEecCCeEEE-EECCEEEEC---CCHHHHHhCcc-
Confidence 457779999999999999887 78999999999997 677899987776 33 379999999 99887776652
Q ss_pred CCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCC--CCccceE-ecCCCceEEEeeCCCCCCCCCCCCeEE-EEeCH
Q 023469 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFS-FQDSEVLSWAHCDSSKPGRSANSERWV-LHSTA 221 (282)
Q Consensus 146 p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~--~~~~g~~-~~~~~~l~wi~~~sskpgr~~~~~~~v-~~~~~ 221 (282)
.+.+...+.+++++|.++.++.+.|+++.+. ....|.+ ..+ .++..+.+.|.+.. .+. ..++ ..+..
T Consensus 303 ------~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~-~~~~~~~~~s~~~~-~~~-~~l~~~~~~g 373 (489)
T 2jae_A 303 ------NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTD-KDISQIMFPYDHYN-SDR-GVVVAYYSSG 373 (489)
T ss_dssp ------CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEES-STTCEEECCSSSTT-SSC-EEEEEEEEET
T ss_pred ------CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCC-CCceEEEeCCCCCC-CCC-CEEEEEeeCC
Confidence 2345667788999999999999999987642 1344323 333 35556666665532 121 2333 23445
Q ss_pred HHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccCcc
Q 023469 222 DYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWYRR 273 (282)
Q Consensus 222 ~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~~A 273 (282)
..+....+. +++++++.+++.|+++++. ...|.....++|...
T Consensus 374 ~~~~~~~~~---------~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~ 418 (489)
T 2jae_A 374 KRQEAFESL---------THRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRT 418 (489)
T ss_dssp HHHHHHHTS---------CHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGS
T ss_pred chhhhhhcC---------CHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCC
Confidence 555544444 7889999999999998764 356788888999864
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.43 E-value=1.4e-13 Score=129.85 Aligned_cols=185 Identities=14% Similarity=0.179 Sum_probs=124.1
Q ss_pred cEEeCCCchHHHHHHhcCCC-CeeEcceeEEEEEeecCCCC------eEEEcc--CC---CccccccEEEecCCCCCcch
Q 023469 71 KYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNL------WSVSGL--DG---QSLGQFNGVVASDKNVVSPR 138 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~------w~l~~~--~G---~~~~~~d~VVla~~~~pa~~ 138 (282)
.|..++||++|+++|++.++ .+|+++++|++|.+ .+++ |.|... +| +. ..||+||+| +|++.
T Consensus 235 ~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~--~~~~~~~~~~~~v~~~~~~g~~~~~-~~ad~VI~a---~p~~~ 308 (504)
T 1sez_A 235 SFSFLGGMQTLTDAICKDLREDELRLNSRVLELSC--SCTEDSAIDSWSIISASPHKRQSEE-ESFDAVIMT---APLCD 308 (504)
T ss_dssp CBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEE--ECSSSSSSCEEEEEEBCSSSSCBCC-CEESEEEEC---SCHHH
T ss_pred eEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEe--cCCCCcccceEEEEEcCCCCcccee-EECCEEEEC---CCHHH
Confidence 46668999999999999887 78999999999997 4455 888764 45 33 379999999 99999
Q ss_pred hhhhcCCCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCC--CccceEecCCC------ceEEEeeCCCC-CCCC
Q 023469 139 FRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI--PVKGFSFQDSE------VLSWAHCDSSK-PGRS 209 (282)
Q Consensus 139 ~~~ll~~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~--~~~g~~~~~~~------~l~wi~~~ssk-pgr~ 209 (282)
+..++..+. ..++.++ .+..+.|.++.++.+.|+++.+.. +..++++++.+ .+.-+ ..|.+ |.+.
T Consensus 309 l~~ll~~~~--~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~-~~s~~~~~~~ 382 (504)
T 1sez_A 309 VKSMKIAKR--GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTL-FSSMMFPDRA 382 (504)
T ss_dssp HHTSEEESS--SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEE-EHHHHCGGGS
T ss_pred HHHHhhccc--CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEE-eeccccCCcC
Confidence 998872000 0011121 267788999999999999875432 23455665322 22212 22222 4444
Q ss_pred CCCC-eEEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccc
Q 023469 210 ANSE-RWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNI 276 (282)
Q Consensus 210 ~~~~-~~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~ 276 (282)
|.+. .++.+.....+....+. +++++++.++++|+++++....|....++||.+++|.
T Consensus 383 p~g~~~l~~~~~g~~~~~~~~~---------~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~ 441 (504)
T 1sez_A 383 PNNVYLYTTFVGGSRNRELAKA---------SRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPL 441 (504)
T ss_dssp CTTEEEEEEEEESTTCGGGTTC---------CHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCcccccCC---------CHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCc
Confidence 4322 23344433332222222 7889999999999998766567999999999999885
No 12
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.41 E-value=2.2e-12 Score=118.88 Aligned_cols=182 Identities=10% Similarity=0.018 Sum_probs=128.5
Q ss_pred EEeCCCchHHHHHHhcCC---CCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEecCCCCCcchhhhhcCCCC
Q 023469 72 YVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (282)
Q Consensus 72 yvg~~Gm~~l~~~La~~l---~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~ 147 (282)
+...+||.+|++.|++.+ |++|+++++|++|.. ++++|. |.++ |+.+ .+|.||+| +|++.+..||..+.
T Consensus 189 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~~~gv~~~-g~~~-~ad~VV~a---~~~~~~~~ll~~~~ 261 (425)
T 3ka7_A 189 GIPEGGCKGIIDALETVISANGGKIHTGQEVSKILI--ENGKAAGIIAD-DRIH-DADLVISN---LGHAATAVLCSEAL 261 (425)
T ss_dssp EEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEET-TEEE-ECSEEEEC---SCHHHHHHHTTTTC
T ss_pred cccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEE--ECCEEEEEEEC-CEEE-ECCEEEEC---CCHHHHHHhcCCcc
Confidence 455789999999998754 689999999999997 566776 6654 6554 79999999 99999999885211
Q ss_pred CCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCccceEecCC-CceEEEeeCCCC-CCCCCCCCe-EEEEeCHHHH
Q 023469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS-EVLSWAHCDSSK-PGRSANSER-WVLHSTADYA 224 (282)
Q Consensus 148 ~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~~~~~~-~~l~wi~~~ssk-pgr~~~~~~-~v~~~~~~~s 224 (282)
. ....++..+.++.++|++.+++.++|+++.. +..+++++.+ ..+.++...|.+ |+++|.+.. +.++....|
T Consensus 262 ~--~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~- 336 (425)
T 3ka7_A 262 S--KEADAAYFKMVGTLQPSAGIKICLAADEPLV--GHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP- 336 (425)
T ss_dssp C--TTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--CSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-
T ss_pred c--ccCCHHHHHHhhCcCCCceEEEEeecCCCcc--CcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-
Confidence 0 0113466777889999999999999998753 4566666443 346666666666 888775432 223332222
Q ss_pred HHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCcccccc
Q 023469 225 RTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNIT 277 (282)
Q Consensus 225 ~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~~ 277 (282)
...+ ..++.++.++++|+++++. ..++...+++|+.++|..
T Consensus 337 -~~~~----------~~~~~~~~~~~~l~~~~p~-~~~~~~~v~~~~~~~P~~ 377 (425)
T 3ka7_A 337 -ENVK----------NLESEIEMGLEDLKEIFPG-KRYEVLLIQSYHDEWPVN 377 (425)
T ss_dssp -GGGG----------GHHHHHHHHHHHHHHHSTT-CCEEEEEEEEEBTTBCSB
T ss_pred -cccc----------chHHHHHHHHHHHHHhCCC-CceEEEEEEEECCCcccc
Confidence 1111 2345568999999999865 467778999999999975
No 13
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.32 E-value=4.2e-11 Score=117.13 Aligned_cols=176 Identities=11% Similarity=0.101 Sum_probs=126.7
Q ss_pred CccEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC------CCccccccEEEecCCCCCcchhhhh
Q 023469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (282)
Q Consensus 69 ~~~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~------G~~~~~~d~VVla~~~~pa~~~~~l 142 (282)
...|..++||++|+++|++.+ +|++|++|++|++ .+++|.|++.+ |+.+ .||+||+| +|...+..+
T Consensus 391 g~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~--~~~~v~V~~~~~~~~~~~~~~-~Ad~VI~t---vP~~vL~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFIY-KCDAVLCT---LPLGVLKQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEE--ETTEEEEEEEESSCTTCEEEE-EESEEEEC---CCHHHHHCS
T ss_pred CceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEE--CCCcEEEEEeecccCCCCeEE-EeCEEEEC---CCHHHHhcc
Confidence 346788999999999999855 6999999999998 66789988654 3333 79999999 999888764
Q ss_pred cC---CCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCC--ccceEecC---CCceEEEeeCCCCCCCCCCCCe
Q 023469 143 TG---RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP--VKGFSFQD---SEVLSWAHCDSSKPGRSANSER 214 (282)
Q Consensus 143 l~---~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~--~~g~~~~~---~~~l~wi~~~sskpgr~~~~~~ 214 (282)
.+ ..| ++.+...++++.++|.++.++.+.|++++|..+ ..|++.+. ...+ ++.+++++ . .+
T Consensus 463 ~~~i~f~P----~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~-~~~~~~~~---~---~v 531 (662)
T 2z3y_A 463 PPAVQFVP----PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL-FLFWNLYK---A---PI 531 (662)
T ss_dssp SCSSEEES----CCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEE-EEEECCSS---S---SE
T ss_pred cCceEEcC----CCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCce-eEEEeCCC---C---CE
Confidence 21 111 233445677899999999999999999987532 33433322 1233 34445542 2 25
Q ss_pred EEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccCc
Q 023469 215 WVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWYR 272 (282)
Q Consensus 215 ~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~~ 272 (282)
++....+..+...... +++++++.+++.|+++++. .+.|....++||..
T Consensus 532 L~~~~~G~~a~~~~~l---------sdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~ 582 (662)
T 2z3y_A 532 LLALVAGEAAGIMENI---------SDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRA 582 (662)
T ss_dssp EEEEECTHHHHHHTTS---------CHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTT
T ss_pred EEEEeccHhHHHHHhC---------CHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECC
Confidence 6666666666554444 7899999999999998764 45799999999986
No 14
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.29 E-value=5.6e-11 Score=118.81 Aligned_cols=176 Identities=11% Similarity=0.089 Sum_probs=126.8
Q ss_pred CccEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC------CCccccccEEEecCCCCCcchhhhh
Q 023469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (282)
Q Consensus 69 ~~~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~------G~~~~~~d~VVla~~~~pa~~~~~l 142 (282)
...|..++||++|+++|++.+ +|+++++|++|.+ .+++|.|++.+ |+.+ .||+||+| +|...+..+
T Consensus 562 g~~~~~~gG~~~L~~aLa~~l--~I~Lnt~V~~I~~--~~~gV~V~~~~~~~~~~g~~i-~AD~VIvT---vPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFIY-KCDAVLCT---LPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTTC--CEECSEEEEEEEE--ETTEEEEEEEESSSTTCEEEE-EESEEEEC---CCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHhCC--CEEeCCeEEEEEE--cCCcEEEEEeecccCCCCeEE-ECCEEEEC---CCHHHHHhh
Confidence 346788999999999999865 5999999999998 67789888654 3333 79999999 999988774
Q ss_pred cC---CCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCC--ccceEecC---CCceEEEeeCCCCCCCCCCCCe
Q 023469 143 TG---RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP--VKGFSFQD---SEVLSWAHCDSSKPGRSANSER 214 (282)
Q Consensus 143 l~---~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~--~~g~~~~~---~~~l~wi~~~sskpgr~~~~~~ 214 (282)
+. ..+ .+.+...++++.++|.++.++++.|++++|..+ ..|++.+. ...+. +.+++.+ . .+
T Consensus 634 ~~~I~F~P----~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~-~~~~~~~---~---pv 702 (852)
T 2xag_A 634 PPAVQFVP----PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELF-LFWNLYK---A---PI 702 (852)
T ss_dssp SCSSEEES----CCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTC-EEEECSS---S---SE
T ss_pred hcccccCC----CCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceE-EEecCCC---C---CE
Confidence 21 111 233345667899999999999999999987532 33433322 12233 2233331 2 25
Q ss_pred EEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccCc
Q 023469 215 WVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWYR 272 (282)
Q Consensus 215 ~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~~ 272 (282)
++....+..+...... +++++++.+++.|+++++. .+.|..+.++||..
T Consensus 703 Ll~~v~G~~a~~l~~l---------sdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~ 753 (852)
T 2xag_A 703 LLALVAGEAAGIMENI---------SDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRA 753 (852)
T ss_dssp EEEEECHHHHHHGGGS---------CHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTT
T ss_pred EEEEecCcCHHHHhcC---------CHHHHHHHHHHHHHHHhCccccCCceEEEEEecCC
Confidence 6666777766655444 7899999999999998764 45799999999986
No 15
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.28 E-value=7.4e-11 Score=117.02 Aligned_cols=180 Identities=13% Similarity=0.112 Sum_probs=129.7
Q ss_pred CccEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhh-cCCCC
Q 023469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDV-TGRPP 147 (282)
Q Consensus 69 ~~~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~l-l~~p~ 147 (282)
...+...+||..++++|++++ +|+++++|++|++ .+++|.|.+.+|+.+ .||+||+| +|...+... +...+
T Consensus 524 G~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~--~~~~v~V~~~~G~~i-~Ad~VIvA---~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 524 GDHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDY--SGDEVQVTTTDGTGY-SAQKVLVT---VPLALLQKGAIQFNP 595 (776)
T ss_dssp SCEEECTTCTHHHHHHHHTTS--CEESSCCEEEEEC--SSSSEEEEETTCCEE-EESEEEEC---CCHHHHHTTCSEEES
T ss_pred CCeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEE--cCCEEEEEECCCcEE-EcCEEEEC---CCHHHHhhcccccCC
Confidence 345566899999999999844 6999999999997 777899998888654 79999999 898877542 11111
Q ss_pred CCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCC-----CccceEecCC--CceEEEeeCCCCCCCCCCCCeEEEEeC
Q 023469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-----PVKGFSFQDS--EVLSWAHCDSSKPGRSANSERWVLHST 220 (282)
Q Consensus 148 ~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~-----~~~g~~~~~~--~~l~wi~~~sskpgr~~~~~~~v~~~~ 220 (282)
++.+...++++.++|.++.++.+.|++++|.. ++.|.+.+.. ..+..++.+++.++.. ..++....
T Consensus 596 ----~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~---~vL~~~i~ 668 (776)
T 4gut_A 596 ----PLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKH---SVLMSVIA 668 (776)
T ss_dssp ----CCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCS---CEEEEEEC
T ss_pred ----CCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCc---eEEEEEec
Confidence 24446677888999999999999999998731 2223232211 1233344566544322 35666677
Q ss_pred HHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccCc
Q 023469 221 ADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWYR 272 (282)
Q Consensus 221 ~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~~ 272 (282)
++.+....+. +++++++.+++.|+++++. .+.|....++||..
T Consensus 669 G~~a~~l~~l---------sdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~ 713 (776)
T 4gut_A 669 GEAVASVRTL---------DDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWST 713 (776)
T ss_dssp THHHHHHHTS---------CHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGG
T ss_pred chhHHHHHcC---------CHHHHHHHHHHHHHHHhCcccccCcceEEEecCCC
Confidence 7666665555 8899999999999999764 45799999999975
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.27 E-value=1.5e-10 Score=108.53 Aligned_cols=174 Identities=13% Similarity=0.128 Sum_probs=122.0
Q ss_pred CCCchHHHHHHhcCC-----------CCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhc
Q 023469 75 VPGMNSICKALCHQP-----------GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVT 143 (282)
Q Consensus 75 ~~Gm~~l~~~La~~l-----------~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll 143 (282)
.+||++|+++|++.+ +.+|+++++|++|+. .+++|.|.+.+|+.+ .+|+||+| +|...+..++
T Consensus 202 ~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vI~a---~~~~~l~~~~ 275 (472)
T 1b37_A 202 QRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY--SPGGVTVKTEDNSVY-SADYVMVS---ASLGVLQSDL 275 (472)
T ss_dssp TTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE--CSSCEEEEETTSCEE-EESEEEEC---SCHHHHHTTS
T ss_pred CCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE--cCCcEEEEECCCCEE-EcCEEEEe---cCHHHhccCC
Confidence 689999999999875 457999999999997 677899998888654 79999999 9998887754
Q ss_pred C-CCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCC-CccceEec-CCC---ceEEEeeCCCCCCCCCCCCeEEE
Q 023469 144 G-RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVKGFSFQ-DSE---VLSWAHCDSSKPGRSANSERWVL 217 (282)
Q Consensus 144 ~-~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~-~~~g~~~~-~~~---~l~wi~~~sskpgr~~~~~~~v~ 217 (282)
- ..+ .+.+...+.++.+.|.++.++.+.|+++.+.. +..++++. +.. ...|...+.+.|+ ...+++
T Consensus 276 ~~~~p----~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~l~~ 347 (472)
T 1b37_A 276 IQFKP----KLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPD----ANVLLV 347 (472)
T ss_dssp SEEES----CCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTT----CCEEEE
T ss_pred eeECC----CCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCC----CCEEEE
Confidence 2 111 23345567788899999999999999987642 22233332 211 1345433433343 234555
Q ss_pred EeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeccC
Q 023469 218 HSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWY 271 (282)
Q Consensus 218 ~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~--~~~P~~~~~~rW~ 271 (282)
...+..++...+. +++++.+.+++.|+++++. .+.|....+++|.
T Consensus 348 ~~~~~~a~~~~~~---------~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~ 394 (472)
T 1b37_A 348 TVTDEESRRIEQQ---------SDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWW 394 (472)
T ss_dssp EEEHHHHHHHHTS---------CHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTT
T ss_pred EechHHHHHHHhC---------CHHHHHHHHHHHHHHHcCCCCCCCCceEEecccC
Confidence 5554444333333 7899999999999999743 3577888899993
No 17
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.25 E-value=3.5e-11 Score=110.98 Aligned_cols=175 Identities=11% Similarity=0.039 Sum_probs=117.9
Q ss_pred EEeCCCchHHHHHHhcC---CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCC
Q 023469 72 YVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (282)
Q Consensus 72 yvg~~Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~ 148 (282)
+...+||..|+++|++. .|++|+++++|++|.. .+++| +.. +|+.+ .+|.||+| ++++.+.+|++.+
T Consensus 182 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~v-V~~-~g~~~-~ad~Vv~a---~~~~~~~~ll~~~-- 251 (421)
T 3nrn_A 182 GLIRGGCKAVIDELERIIMENKGKILTRKEVVEINI--EEKKV-YTR-DNEEY-SFDVAISN---VGVRETVKLIGRD-- 251 (421)
T ss_dssp EEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEET--TTTEE-EET-TCCEE-ECSEEEEC---SCHHHHHHHHCGG--
T ss_pred ceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--ECCEE-EEe-CCcEE-EeCEEEEC---CCHHHHHHhcCcc--
Confidence 55688999999999864 4689999999999996 67788 754 55544 79999999 9999999998511
Q ss_pred CCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCccceEecCCCceEEEeeCCCC-CCCCCCCCeEEEEeCHHHHHHh
Q 023469 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSK-PGRSANSERWVLHSTADYARTV 227 (282)
Q Consensus 149 ~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~~~~~~~~l~wi~~~ssk-pgr~~~~~~~v~~~~~~~s~~~ 227 (282)
...++..+.+.++.|.+++++.++++++. .+..++++..+..+..+.+.|.+ |++.|.+ ..++.+.. +
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~v~l~~~~~~--~~~~~~~~~~~~~~~~i~~~s~~~p~~ap~G-~~~~~~~~-----~ 320 (421)
T 3nrn_A 252 ---YFDRDYLKQVDSIEPSEGIKFNLAVPGEP--RIGNTIVFTPGLMINGFNEPSALDKSLAREG-YTLIMAHM-----A 320 (421)
T ss_dssp ---GSCHHHHHHHHTCCCCCEEEEEEEEESSC--SSCSSEEECTTSSSCEEECGGGTCGGGSCTT-EEEEEEEE-----E
T ss_pred ---cCCHHHHHHHhCCCCCceEEEEEEEcCCc--ccCCeEEEcCCcceeeEeccCCCCCCcCCCC-ceEEEEEE-----e
Confidence 13345667889999999999999999873 23455555443225566666666 7777754 22333321 1
Q ss_pred HhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccCccccccc
Q 023469 228 IAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWYRRSNITC 278 (282)
Q Consensus 228 ~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~~A~P~~~ 278 (282)
... .+.++..+.++++|+++++ ......++||+.++|...
T Consensus 321 ~~~--------~~~~~~~~~~~~~L~~~~p---~~~~~~~~~~~~~~p~~~ 360 (421)
T 3nrn_A 321 LKN--------GNVKKAIEKGWEELLEIFP---EGEPLLAQVYRDGNPVNR 360 (421)
T ss_dssp CTT--------CCHHHHHHHHHHHHHHHCT---TCEEEEEEEC--------
T ss_pred ecc--------ccHHHHHHHHHHHHHHHcC---CCeEEEeeeccCCCCccc
Confidence 111 1334558899999999987 345567899999999874
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.25 E-value=3.5e-11 Score=113.32 Aligned_cols=179 Identities=14% Similarity=0.061 Sum_probs=121.4
Q ss_pred cEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCc---cccccEEEecCCCCCcchhhhhcCCCC
Q 023469 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVASDKNVVSPRFRDVTGRPP 147 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~---~~~~d~VVla~~~~pa~~~~~ll~~p~ 147 (282)
.|...+||++|+++|++.++.+|+++++|++|++ .+++|.|.+.+|+. ...+|+||+| +|...+..+.-.|
T Consensus 233 ~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~--~~~~v~v~~~~~~~~~~~~~ad~vI~t---~p~~~~~~i~f~p- 306 (498)
T 2iid_A 233 FDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQ--NDQKVTVVYETLSKETPSVTADYVIVC---TTSRAVRLIKFNP- 306 (498)
T ss_dssp EEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEE--CSSCEEEEEECSSSCCCEEEESEEEEC---SCHHHHTTSEEES-
T ss_pred eEEeCCcHHHHHHHHHHhcccccccCCEEEEEEE--CCCeEEEEEecCCcccceEEeCEEEEC---CChHHHhheecCC-
Confidence 3456889999999999988668999999999998 67789998777653 1279999999 8988766653112
Q ss_pred CCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCC-Ccc-ceEecCCCceEEEeeCCCC-CCCCCCCCeEEEEeCHHHH
Q 023469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVK-GFSFQDSEVLSWAHCDSSK-PGRSANSERWVLHSTADYA 224 (282)
Q Consensus 148 ~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~-~~~-g~~~~~~~~l~wi~~~ssk-pgr~~~~~~~v~~~~~~~s 224 (282)
++.+...++++.++|.+..++.+.|+++.|.. ... ++...+. +..++...+.. |+. ..+++.....+.+
T Consensus 307 ----~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~s~~~p~g---~~~L~~~~~g~~a 378 (498)
T 2iid_A 307 ----PLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDL-PSRFIYYPNHNFTNG---VGVIIAYGIGDDA 378 (498)
T ss_dssp ----CCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESS-TTCEEECCSSCCTTS---CEEEEEEEEHHHH
T ss_pred ----CCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCC-CcceEEECCCCCCCC---CcEEEEEeCCccH
Confidence 24456677889999999999999999987631 122 3323332 34456554432 332 1344454444444
Q ss_pred HHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCC-----cceeeeeccCc
Q 023469 225 RTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPL-----PIFRKAHRWYR 272 (282)
Q Consensus 225 ~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~-----P~~~~~~rW~~ 272 (282)
...... +++++.+.++++|+++++.... +....+++|..
T Consensus 379 ~~~~~~---------~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~ 422 (498)
T 2iid_A 379 NFFQAL---------DFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSL 422 (498)
T ss_dssp HTTTTS---------CHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGG
T ss_pred hhhhcC---------CHHHHHHHHHHHHHHHcCCChhhhhhhcCccEEEecCC
Confidence 332233 7789999999999998652211 12367899975
No 19
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.20 E-value=3.1e-11 Score=113.60 Aligned_cols=171 Identities=13% Similarity=0.158 Sum_probs=121.8
Q ss_pred cEEeCCCchHHHHHHhcCC---C-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCC
Q 023469 71 KYVGVPGMNSICKALCHQP---G-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l---~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p 146 (282)
.|...+||.+|++.|++.+ + ++|+++++|++|+. .+++|.|.+.+|+.+ .+|+||+| +|.+.+..++-.|
T Consensus 247 ~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vI~a---~~~~~l~~i~~~p 320 (495)
T 2vvm_A 247 SYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVN--ERDAARVTARDGREF-VAKRVVCT---IPLNVLSTIQFSP 320 (495)
T ss_dssp SEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEE--CSSSEEEEETTCCEE-EEEEEEEC---CCGGGGGGSEEES
T ss_pred eEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEE--cCCEEEEEECCCCEE-EcCEEEEC---CCHHHHhheeeCC
Confidence 5677899999999998764 3 56999999999997 667899988888654 79999999 9999888775212
Q ss_pred CCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCccceEecCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHH
Q 023469 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYART 226 (282)
Q Consensus 147 ~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~~~~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~ 226 (282)
.+.+...+.++.+.|.++.++++.|+++.+ .++.|+..++ .++.|+..++..|+.. .+++..... ..
T Consensus 321 -----~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~-~~~~g~~~~~-~~~~~~~~~~~~~~~~---~vl~~~~~~-~~-- 387 (495)
T 2vvm_A 321 -----ALSTERISAMQAGHVSMCTKVHAEVDNKDM-RSWTGIAYPF-NKLCYAIGDGTTPAGN---THLVCFGNS-AN-- 387 (495)
T ss_dssp -----CCCHHHHHHHHHCCCCCCEEEEEEESCGGG-GGEEEEECSS-CSSCEEEEEEECTTSC---EEEEEEECS-TT--
T ss_pred -----CCCHHHHHHHHhcCCCceeEEEEEECCccC-CCceeEecCC-CCcEEEecCCCCCCCC---eEEEEEeCc-cc--
Confidence 233456677888999999999999998764 2556654433 4677777665554321 344444332 11
Q ss_pred hHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcceeeeeccC
Q 023469 227 VIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWY 271 (282)
Q Consensus 227 ~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~~~~~~rW~ 271 (282)
+ . ++++..+.+++.|+++++....|....++||.
T Consensus 388 ~--~---------~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~W~ 421 (495)
T 2vvm_A 388 H--I---------QPDEDVRETLKAVGQLAPGTFGVKRLVFHNWV 421 (495)
T ss_dssp C--C---------CTTTCHHHHHHHHHTTSTTSCCEEEEEECCTT
T ss_pred c--C---------CCHHHHHHHHHHHHHhcCCCCCceEEEEeEcC
Confidence 1 1 22344566778888887655678889999994
No 20
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.15 E-value=7.4e-11 Score=111.11 Aligned_cols=178 Identities=10% Similarity=0.104 Sum_probs=116.2
Q ss_pred EeCCCchHHHHHHhcCCC---CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCC
Q 023469 73 VGVPGMNSICKALCHQPG---VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l~---~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~ 149 (282)
..++||++|+++|++.+. ++|+++++|.+|.. +++.+ .+.+|+.+ .||+||+| +|.+.+..++.
T Consensus 216 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~~v--~~~~G~~~-~ad~vI~t---~P~~~l~~~l~----- 282 (513)
T 4gde_A 216 PARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNKTV--TLQDGTTI-GYKKLVST---MAVDFLAEAMN----- 282 (513)
T ss_dssp ESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEET--TTTEE--EETTSCEE-EEEEEEEC---SCHHHHHHHTT-----
T ss_pred cccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEc--cCCEE--EEcCCCEE-ECCEEEEC---CCHHHHHHhcC-----
Confidence 346899999999998774 68999999999986 55444 45678764 79999999 99999999885
Q ss_pred CCCcchHHHHHhccCCCcceeEEEEeccCCCCC--CCccceEecCCC-ce----------------------EEEeeCCC
Q 023469 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSE-VL----------------------SWAHCDSS 204 (282)
Q Consensus 150 ~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~--~~~~g~~~~~~~-~l----------------------~wi~~~ss 204 (282)
.+........++|.++.++.++++..... .+...+.+++.+ ++ .....++.
T Consensus 283 ----~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~ 358 (513)
T 4gde_A 283 ----DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGS 358 (513)
T ss_dssp ----CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSC
T ss_pred ----chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCC
Confidence 13456677899999999999999875321 122223333211 11 11111222
Q ss_pred CCCCCCC--CCeEEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCC--CcceeeeeccCcccccc
Q 023469 205 KPGRSAN--SERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIP--LPIFRKAHRWYRRSNIT 277 (282)
Q Consensus 205 kpgr~~~--~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~--~P~~~~~~rW~~A~P~~ 277 (282)
.|.+.+. ...+....... ...... .+++++++.++++|.++++..+ .+....++||.+|+|+-
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y 425 (513)
T 4gde_A 359 RPQSTEAKEGPYWSIMLEVS-ESSMKP---------VNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTP 425 (513)
T ss_dssp CCSCCSEECCCEEEEEEEEE-EBTTBC---------CCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECC
T ss_pred CcccccCCcceEEEEEeccc-chhccC---------CCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeeccc
Confidence 2443321 11111111110 001112 2778999999999999865433 46788999999999974
No 21
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.75 E-value=7.8e-06 Score=68.20 Aligned_cols=235 Identities=27% Similarity=0.530 Sum_probs=133.6
Q ss_pred eecccCCCceecCChhHHHHHHHHHhCCceeeccCcceeeeccCceeeecccCCCCccEEeCCCchHHHHHHhcCCCCee
Q 023469 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (282)
Q Consensus 14 ~~~DhGAqyft~~~~~f~~~v~~~~~~g~v~~W~~~~~~~~~~~~~~~~~~~~~~~~~yvg~~Gm~~l~~~La~~l~~~v 93 (282)
..+|||+|||+++++.|...+..+...+....+............. .......++.+..++............ +
T Consensus 49 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 122 (336)
T 3kkj_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLS----PSPDEQVRWVGKPGMSAITRAMRGDMP--V 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSBCC----CCCTTSCEEEESSSTHHHHHHHHTTCC--E
T ss_pred ceeecCccccccCcHHHHHHHHHHHhcccccccccccccccccccc----ccccccceeecccccccchhcccccce--e
Confidence 4799999999999999999999999989888887765543321111 123445678888888888877776443 5
Q ss_pred EcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCCcchHHHHHhccCCCcceeEEE
Q 023469 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (282)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~~~~~~~~l~~v~~~p~~~v~ 173 (282)
........... ..+.+.+....+........++.+ .........+. .............+.......
T Consensus 123 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 189 (336)
T 3kkj_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLLA--------AAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESCEEEC---SCHHHHGGGGT--------TCHHHHHHHTTCCEEEEEEEE
T ss_pred ecceeeccccc--ccccccccccccccccccccceec---cccchhhhhhc--------ccccccccccccccccchhhh
Confidence 56666665554 455666665555332223344444 22222222221 112233334445555566666
Q ss_pred EeccCCCCCCCccceEecCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHH
Q 023469 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQ 253 (282)
Q Consensus 174 l~~~~~~~~~~~~g~~~~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~ 253 (282)
..+...... ....... ......+........+.....................+. ......+.....+.
T Consensus 190 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 258 (336)
T 3kkj_A 190 LAFETPLQT-PMQGCFV-QDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDA---------SREQVIEHLHGAFA 258 (336)
T ss_dssp EEESSCCSC-CCCEEEE-CSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTS---------CHHHHHHHHHHHHH
T ss_pred hcccccccc-ccccccc-cccccccccccccccccccccccceeccccccccccccc---------cchhhhhhhhhhhh
Confidence 666554321 1111112 222333333333332222222345556666655554443 44555666666666
Q ss_pred hcC-CCCCCcceeeeeccCccccccc
Q 023469 254 GTG-LSIPLPIFRKAHRWYRRSNITC 278 (282)
Q Consensus 254 ~l~-~~~~~P~~~~~~rW~~A~P~~~ 278 (282)
... ...+.|.+..+|||+|++|...
T Consensus 259 ~~~~~~~~~~~~~~~~~w~~a~~~~~ 284 (336)
T 3kkj_A 259 ELIDCTMPAPVFSLAHRWLYARPAGA 284 (336)
T ss_dssp TTCSSCCCCCSEEEEEEEEEEEESSC
T ss_pred hhccCCcCcchheeccceeecccccc
Confidence 553 4567899999999999988653
No 22
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.61 E-value=8.2e-07 Score=83.96 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=79.2
Q ss_pred CchHHHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhc----------CC
Q 023469 77 GMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVT----------GR 145 (282)
Q Consensus 77 Gm~~l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll----------~~ 145 (282)
||++|+++|++.+. .+|+++++|++|.+ .+++++.|.+.+|+.+ .||+||+| +|...+...+ ..
T Consensus 200 g~~~l~~~l~~~l~~~~i~~~~~V~~I~~-~~~~~v~v~~~~g~~~-~ad~VI~t---~p~~~l~~~~~~~~~~~~~i~f 274 (516)
T 1rsg_A 200 NYDSVVQRIAQSFPQNWLKLSCEVKSITR-EPSKNVTVNCEDGTVY-NADYVIIT---VPQSVLNLSVQPEKNLRGRIEF 274 (516)
T ss_dssp CHHHHHHHHHTTSCGGGEETTCCEEEEEE-CTTSCEEEEETTSCEE-EEEEEEEC---CCHHHHHGGGSSCSCSTTCCEE
T ss_pred CHHHHHHHHHHhCCCCEEEECCEEEEEEE-cCCCeEEEEECCCcEE-ECCEEEEC---CCHHHhhhccccccccccceEe
Confidence 39999999999875 57999999999997 2256799998888654 79999999 8888775431 11
Q ss_pred CCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCCCCccce
Q 023469 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF 188 (282)
Q Consensus 146 p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~ 188 (282)
.| ++.+...++++.+.|.++.++.+.|++++|..+..++
T Consensus 275 ~P----~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~ 313 (516)
T 1rsg_A 275 QP----PLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKI 313 (516)
T ss_dssp ES----CCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEE
T ss_pred cC----CCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcE
Confidence 01 2444667889999999999999999999875333333
No 23
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.51 E-value=3.4e-07 Score=85.92 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=58.6
Q ss_pred EEeCCCchHHHHHHhcC---CCCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEecCCCCCcchhhhhcCCCC
Q 023469 72 YVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (282)
Q Consensus 72 yvg~~Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~ 147 (282)
|.-++||++|+++|++. .|.+|+++++|++|.. +++++. |.+++|+.+ .+|+||++ ++++.+...| ++.
T Consensus 214 ~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~~~~~gV~~~~g~~~-~ad~VV~~---a~~~~~~~~L-l~~ 286 (501)
T 4dgk_A 214 WFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET--TGNKIEAVHLEDGRRF-LTQAVASN---ADVVHTYRDL-LSQ 286 (501)
T ss_dssp EEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSCEEEC---CC------------
T ss_pred EEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe--eCCeEEEEEecCCcEE-EcCEEEEC---CCHHHHHHHh-ccc
Confidence 45688999999999874 5789999999999997 566665 778888775 79999999 7776665433 111
Q ss_pred CCCCCcchHHHHHhccCCCc-ceeEEEEeccCCC
Q 023469 148 PLDLTFAPDLAVKLEEIPVN-PCFALMLAFSEPL 180 (282)
Q Consensus 148 ~~~~~~~~~~~~~l~~v~~~-p~~~v~l~~~~~~ 180 (282)
. .......+.++..+++ +++++.++++.+.
T Consensus 287 ~---~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 317 (501)
T 4dgk_A 287 H---PAAVKQSNKLQTKRMSNSLFVLYFGLNHHH 317 (501)
T ss_dssp -------------------CCEEEEEEEEESSCC
T ss_pred c---ccchhhhhhhhccccCCceeEEEecccCCc
Confidence 0 1112333445555554 5778888888764
No 24
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.51 E-value=6.9e-07 Score=82.06 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=76.7
Q ss_pred eCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCCc
Q 023469 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTF 153 (282)
Q Consensus 74 g~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~ 153 (282)
..+||..+++.|++.++ +|+++++|++|+. .++++.|.+.+|+.+ .+|+||+| +|.+.+..+.-.| ++
T Consensus 202 ~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vi~a---~~~~~l~~i~~~p-----~l 269 (431)
T 3k7m_X 202 FSNGSADLVDAMSQEIP-EIRLQTVVTGIDQ--SGDVVNVTVKDGHAF-QAHSVIVA---TPMNTWRRIVFTP-----AL 269 (431)
T ss_dssp ETTCTHHHHHHHHTTCS-CEESSCCEEEEEC--SSSSEEEEETTSCCE-EEEEEEEC---SCGGGGGGSEEES-----CC
T ss_pred cCCcHHHHHHHHHhhCC-ceEeCCEEEEEEE--cCCeEEEEECCCCEE-EeCEEEEe---cCcchHhheeeCC-----CC
Confidence 47899999999999888 8999999999997 677899998888654 79999999 8988877663212 23
Q ss_pred chHHHHHhccCCCcceeEEEEeccCCC
Q 023469 154 APDLAVKLEEIPVNPCFALMLAFSEPL 180 (282)
Q Consensus 154 ~~~~~~~l~~v~~~p~~~v~l~~~~~~ 180 (282)
.+...+.+..+.|.+..++.+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 270 PERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp CHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred CHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 334455677888999999999999875
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.47 E-value=3.2e-07 Score=84.22 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=66.6
Q ss_pred EEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCC
Q 023469 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDL 151 (282)
Q Consensus 72 yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~ 151 (282)
|...+||++++++|++.++.+|+++++|++|.+ .+++|.|.+.+|+ + .||+||+| +|++++..++.
T Consensus 199 ~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~--~~~~v~v~~~~g~-~-~ad~Vv~a---~~~~~~~~~l~------- 264 (424)
T 2b9w_A 199 WTWADGTQAMFEHLNATLEHPAERNVDITRITR--EDGKVHIHTTDWD-R-ESDVLVLT---VPLEKFLDYSD------- 264 (424)
T ss_dssp BCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEEC--CTTCEEEEESSCE-E-EESEEEEC---SCHHHHTTSBC-------
T ss_pred EEeCChHHHHHHHHHHhhcceEEcCCEEEEEEE--ECCEEEEEECCCe-E-EcCEEEEC---CCHHHHhhccC-------
Confidence 455789999999999988778999999999997 6678999888875 3 79999999 99998877653
Q ss_pred CcchHHHHHhccCCCccee
Q 023469 152 TFAPDLAVKLEEIPVNPCF 170 (282)
Q Consensus 152 ~~~~~~~~~l~~v~~~p~~ 170 (282)
..++..+.+.++.|.+..
T Consensus 265 -~~~~~~~~~~~~~~~~~~ 282 (424)
T 2b9w_A 265 -ADDDEREYFSKIIHQQYM 282 (424)
T ss_dssp -CCHHHHHHHTTCEEEEEE
T ss_pred -CCHHHHHHHhcCCcceeE
Confidence 123344567788877744
No 26
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.13 E-value=3.2e-06 Score=82.78 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=76.3
Q ss_pred ccEEeCCCchHHHHHHhcCC--CCeeEcceeEE--EEEeecCCCC-------eEEE-ccCCCc-cccccEEEecCCCCCc
Q 023469 70 KKYVGVPGMNSICKALCHQP--GVESKFGVGVG--RFEWLEDKNL-------WSVS-GLDGQS-LGQFNGVVASDKNVVS 136 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~~l--~~~v~~~~~V~--~i~~~~~~~~-------w~l~-~~~G~~-~~~~d~VVla~~~~pa 136 (282)
..|...+||..|+++|++.+ +..|+++++|+ +|.+ .+++ ..|+ ..+|+. ...||+||+| +|.
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~--~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvT---vP~ 412 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVAN--ACHSGTASARAQLLSYDSHNAVHSEAYDFVILA---VPH 412 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEE--EEECSSSSCCEEEEEEETTCCEEEEEESEEEEC---SCH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEE--CCCCCccccceEEEEEecCCceEEEEcCEEEEC---CCH
Confidence 34555789999999999987 56799999999 9987 3333 7773 445651 2379999999 898
Q ss_pred chhhhh-----cC----------------------CCCCC--CCC--cchHHHHHhccCCCcceeEEEEec-----cCCC
Q 023469 137 PRFRDV-----TG----------------------RPPPL--DLT--FAPDLAVKLEEIPVNPCFALMLAF-----SEPL 180 (282)
Q Consensus 137 ~~~~~l-----l~----------------------~p~~~--~~~--~~~~~~~~l~~v~~~p~~~v~l~~-----~~~~ 180 (282)
+.+..+ +. .|+.+ ... ..+...++++++.|.+..++.+.| ++++
T Consensus 413 ~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~f 492 (721)
T 3ayj_A 413 DQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPW 492 (721)
T ss_dssp HHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTT
T ss_pred HHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCc
Confidence 877431 11 12111 000 004567889999999999999999 8888
Q ss_pred CC
Q 023469 181 SS 182 (282)
Q Consensus 181 ~~ 182 (282)
|.
T Consensus 493 W~ 494 (721)
T 3ayj_A 493 VP 494 (721)
T ss_dssp SC
T ss_pred cc
Confidence 74
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.64 E-value=0.00039 Score=63.41 Aligned_cols=76 Identities=8% Similarity=-0.069 Sum_probs=59.7
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCC
Q 023469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~ 152 (282)
..++||++|+++|++.++.+|+++++|.+|.+ . | + .+..||+||+| +|++++..+
T Consensus 199 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~--~---v-----~--~~~~aD~VI~t---~p~~~l~~~---------- 253 (399)
T 1v0j_A 199 LPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG--Q---L-----R--PGSPAAPVVYT---GPLDRYFDY---------- 253 (399)
T ss_dssp CBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH--H---H-----T--TTSTTCCEEEC---SCHHHHTTT----------
T ss_pred cccccHHHHHHHHHhcCCeEEEECCchhhhhh--h---h-----h--hcccCCEEEEC---CcHHHHHhh----------
Confidence 45789999999999988889999999999974 2 3 1 21159999999 888865443
Q ss_pred cchHHHHHhccCCCcceeEEEEeccCCC
Q 023469 153 FAPDLAVKLEEIPVNPCFALMLAFSEPL 180 (282)
Q Consensus 153 ~~~~~~~~l~~v~~~p~~~v~l~~~~~~ 180 (282)
.+.+++|.++..+.+.++.+.
T Consensus 254 -------~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 254 -------AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp -------TTCCCCEEEEEEEEEEESSSC
T ss_pred -------hhCCCCcceEEEEEEEEcccc
Confidence 246789999888888887753
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.48 E-value=0.0012 Score=59.93 Aligned_cols=67 Identities=7% Similarity=0.035 Sum_probs=55.8
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEE-EEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCC
Q 023469 73 VGVPGMNSICKALCHQPGVESKFGVGVG-RFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDL 151 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l~~~v~~~~~V~-~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~ 151 (282)
..++|+++|+++|++..+.+|+++++|. +|.. .||+||+| +|++++..+
T Consensus 193 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~------------------~~d~VI~a---~p~~~~~~~--------- 242 (384)
T 2bi7_A 193 MPKCGYTQMIKSILNHENIKVDLQREFIVEERT------------------HYDHVFYS---GPLDAFYGY--------- 242 (384)
T ss_dssp EETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG------------------GSSEEEEC---SCHHHHTTT---------
T ss_pred EECcCHHHHHHHHHhcCCCEEEECCeeehhhhc------------------cCCEEEEc---CCHHHHHHh---------
Confidence 5689999999999997778899999998 7752 28999999 888875543
Q ss_pred CcchHHHHHhccCCCcceeEEEEecc
Q 023469 152 TFAPDLAVKLEEIPVNPCFALMLAFS 177 (282)
Q Consensus 152 ~~~~~~~~~l~~v~~~p~~~v~l~~~ 177 (282)
.+.+++|.++..+.+.++
T Consensus 243 --------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 243 --------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------TTCCCCEEEEEEEEEEEE
T ss_pred --------hcCCCCcceEEEEEEEeC
Confidence 246789999999999997
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.29 E-value=0.0015 Score=58.85 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=57.4
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCC
Q 023469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~ 152 (282)
..++|+++|+++|++ +.+|+++++|.+|.. .| . ..||+||+| +|++++..+
T Consensus 189 ~p~gG~~~l~~~l~~--g~~i~l~~~V~~i~~-----~v--------~-~~~D~VV~a---~p~~~~~~~---------- 239 (367)
T 1i8t_A 189 IPVGGYTKLIEKMLE--GVDVKLGIDFLKDKD-----SL--------A-SKAHRIIYT---GPIDQYFDY---------- 239 (367)
T ss_dssp CBTTCHHHHHHHHHT--TSEEECSCCGGGSHH-----HH--------H-TTEEEEEEC---SCHHHHTTT----------
T ss_pred ccCCCHHHHHHHHhc--CCEEEeCCceeeech-----hh--------h-ccCCEEEEe---ccHHHHHHH----------
Confidence 557999999999998 578999999998863 13 1 269999999 888764332
Q ss_pred cchHHHHHhccCCCcceeEEEEeccCCC
Q 023469 153 FAPDLAVKLEEIPVNPCFALMLAFSEPL 180 (282)
Q Consensus 153 ~~~~~~~~l~~v~~~p~~~v~l~~~~~~ 180 (282)
.+.+++|.++..+.+.++++.
T Consensus 240 -------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 240 -------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp -------TTCCCCEEEEEEEEEEESSSC
T ss_pred -------hhCCCCCceEEEEEEEecccc
Confidence 256899999999999998763
No 30
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.97 E-value=0.015 Score=53.47 Aligned_cols=57 Identities=7% Similarity=0.057 Sum_probs=43.7
Q ss_pred cEEeCCCchHHHHHHhcC---CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+...+||+.|+++|++. .|.+|+++++|.+|.. .++++.....+|+.+ .+|+||+|
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~~~v~~v~~~g~~~-~ad~VV~a 285 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSEGEVA-RCKQLICD 285 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEE--ETTEEEEEEETTEEE-ECSEEEEC
T ss_pred EEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEE--eCCEEEEEEECCeEE-ECCEEEEC
Confidence 456788999999999864 3678999999999987 455555323466554 79999999
No 31
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.45 E-value=0.057 Score=50.35 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=44.4
Q ss_pred ccEEeCCCchHHHHHHhcC---CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 70 KKYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
+-+...+||+.|+++|++. .|++|+++++|.+|....++..+.|.+.+|+.+ .+|+||++
T Consensus 247 ~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i-~Ad~VI~a 309 (475)
T 3p1w_A 247 PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIA-YCDKVICD 309 (475)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEE-EEEEEEEC
T ss_pred ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEE-ECCEEEEC
Confidence 3445688999999988663 478999999999998511233477888888654 79999999
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.95 E-value=0.033 Score=51.37 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=42.3
Q ss_pred EeCCCchHHHHHHhcCC---CCeeEcceeEEEEEeecC--CCC-eEEEccCCCccccccEEEec
Q 023469 73 VGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLED--KNL-WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l---~~~v~~~~~V~~i~~~~~--~~~-w~l~~~~G~~~~~~d~VVla 130 (282)
...+||..|+++|++.+ |.+|+++++|.+|.. . +++ +.+.+ +|+.+ .+|+||++
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~~~V~~-~g~~~-~ad~VV~a 295 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLY--KKDTGKFEGVKT-KLGTF-KAPLVIAD 295 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE--ETTTTEEEEEEE-TTEEE-ECSCEEEC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEE--ECCCCeEEEEEE-CCeEE-ECCEEEEC
Confidence 66889999999998654 789999999999987 4 444 35555 46554 79999999
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=93.54 E-value=0.13 Score=46.74 Aligned_cols=92 Identities=8% Similarity=0.137 Sum_probs=63.0
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCC
Q 023469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (282)
Q Consensus 73 vg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~ 152 (282)
...+|.++|.++|++..+.+|+++++|..+ +... .+|+||.| .|.+.+..
T Consensus 217 ~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~---------------~~~~-~~d~vI~T---~P~d~~~~----------- 266 (397)
T 3hdq_A 217 MPLHGYTRMFQNMLSSPNIKVMLNTDYREI---------------ADFI-PFQHMIYT---GPVDAFFD----------- 266 (397)
T ss_dssp EETTCHHHHHHHHTCSTTEEEEESCCGGGT---------------TTTS-CEEEEEEC---SCHHHHTT-----------
T ss_pred ccCCCHHHHHHHHHhccCCEEEECCeEEec---------------cccc-cCCEEEEc---CCHHHHHH-----------
Confidence 458999999999999888899999988632 2122 68999999 77664321
Q ss_pred cchHHHHHhccCCCcceeEEEEeccCCCCCCCccceEecCCCceEEEee
Q 023469 153 FAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHC 201 (282)
Q Consensus 153 ~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~~~~~g~~~~~~~~l~wi~~ 201 (282)
..+..++|.+...+.++++.+.. .+..-+.+++.++..-|..
T Consensus 267 ------~~~g~L~yrsl~~~~~~~~~~~~-~~~~~vn~~d~~p~tRi~e 308 (397)
T 3hdq_A 267 ------FCYGKLPYRSLEFRHETHDTEQL-LPTGTVNYPNDYAYTRVSE 308 (397)
T ss_dssp ------TTTCCCCEEEEEEEEEEESSSCS-CSSSEEECSSSSSCSEEEE
T ss_pred ------HhcCCCCCceEEEEEEEeccccC-CCCeEEEeCCCCcceEEEe
Confidence 13567899999999999986532 1222233444335555553
No 34
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.77 E-value=0.069 Score=40.71 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=40.8
Q ss_pred cccEEEecCCCCCcchhhhhcCCCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCCC
Q 023469 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (282)
Q Consensus 123 ~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~~ 182 (282)
.||+||+| +|...+..+. ..| ++.+...++++.++|.+..++++.|++++|+
T Consensus 7 ~Ad~VIvT---vP~~vL~~I~-F~P----~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 7 TGDLAIVT---IPFSSLRFVK-VTP----PFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp EESEEEEC---SCHHHHTTSE-EES----CCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred EcCEEEEc---CCHHHHhcCc-CCC----CCCHHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 68999999 8888766432 212 3445667888999999999999999999874
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.71 E-value=0.25 Score=43.54 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=32.5
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.|++|+++++|.+|.. .+++|.|.+++| .+ .+|+||+|
T Consensus 167 ~Gv~i~~~~~V~~i~~--~~~~~~V~t~~g-~i-~a~~VV~A 204 (381)
T 3nyc_A 167 NQGQVLCNHEALEIRR--VDGAWEVRCDAG-SY-RAAVLVNA 204 (381)
T ss_dssp TTCEEESSCCCCEEEE--ETTEEEEECSSE-EE-EESEEEEC
T ss_pred CCCEEEcCCEEEEEEE--eCCeEEEEeCCC-EE-EcCEEEEC
Confidence 5789999999999997 566799998887 33 79999999
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.51 E-value=0.18 Score=48.71 Aligned_cols=88 Identities=10% Similarity=0.014 Sum_probs=57.7
Q ss_pred ccEEeCCCchHHHHHHhc---CCCCeeEcceeEEEEEeecCC-CCe-EEEccCCCccccccEEEecCCCCCcchhhhhcC
Q 023469 70 KKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLEDK-NLW-SVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTG 144 (282)
Q Consensus 70 ~~yvg~~Gm~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~-~~w-~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~ 144 (282)
.-+...+||++|+++|++ ..|.+|+++++|.+|.. ..+ ++. .+...+|+.+ .+|+||+. |..
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~-~~~~g~v~gV~~~~Ge~i-~A~~VVs~----~~~------- 435 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVV-DKESRKCKAVIDQFGQRI-ISKHFIIE----DSY------- 435 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEE-ETTTCCEEEEEETTSCEE-ECSEEEEE----GGG-------
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEE-eCCCCeEEEEEeCCCCEE-EcCEEEEC----hhh-------
Confidence 445668899999998854 45889999999999986 231 333 3445668765 78999987 221
Q ss_pred CCCCCCCCcchHHHHHhccCCCcceeEEEEeccCCCC
Q 023469 145 RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181 (282)
Q Consensus 145 ~p~~~~~~~~~~~~~~l~~v~~~p~~~v~l~~~~~~~ 181 (282)
.|. .+ ...+.+..+.-+.++++++..
T Consensus 436 lp~--------~~---~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 436 LSE--------NT---CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp BCT--------TT---TTTCCCEEEEEEEEEESSCSS
T ss_pred cCH--------hH---hccccccceEEEEEEecCCCC
Confidence 111 11 123345667777788888753
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.40 E-value=0.24 Score=48.10 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=37.3
Q ss_pred hHHHHHHhc---CCCCeeEcceeEEEEEeecCCCCeEEEccCCC-ccccccEEEec
Q 023469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVla 130 (282)
..+++.|.+ ..|++|+++++|.+|.. .+++|.|.+.+|+ .+ .+|.||+|
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~~i-~Ad~VVlA 464 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKR--IDSQWQLTFGQSQAAK-HHATVILA 464 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CSSSEEEEEC-CCCCE-EESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEE--eCCeEEEEeCCCcEEE-ECCEEEEC
Confidence 345555443 35789999999999997 6778999988875 43 79999999
No 38
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.27 E-value=0.18 Score=45.48 Aligned_cols=44 Identities=11% Similarity=0.015 Sum_probs=34.4
Q ss_pred CccEEeCCCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEE
Q 023469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVS 114 (282)
Q Consensus 69 ~~~yvg~~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~ 114 (282)
...|.-.+||..|+++|++.++.+|+++++|++|.. .+++..+.
T Consensus 310 ~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~--~~~gv~v~ 353 (376)
T 2e1m_A 310 ATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEY--YDPGRDGH 353 (376)
T ss_dssp CCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEE--CCCC----
T ss_pred CceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEE--CCCceEEE
Confidence 456677899999999999998878999999999997 55555443
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.96 E-value=0.22 Score=48.27 Aligned_cols=49 Identities=14% Similarity=0.266 Sum_probs=37.9
Q ss_pred hHHHHHHhc---CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..+++.|.+ ..|++|+++++|.+|.. .+++|.|.+.+|+.+ .+|.||+|
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~i-~Ad~VVlA 468 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSR--KDDCWLLNFAGDQQA-THSVVVLA 468 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEE--eCCeEEEEECCCCEE-ECCEEEEC
Confidence 344554443 35789999999999997 667899988777654 79999999
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=90.72 E-value=0.32 Score=42.47 Aligned_cols=49 Identities=6% Similarity=-0.090 Sum_probs=35.6
Q ss_pred HHHHHHhc---CCCCeeEcceeEEEEEeecCCCC-eEEEccCCC-ccccccEEEec
Q 023469 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~-~~~~~d~VVla 130 (282)
.+++.|++ ..|++++++++|.+|.. .+++ |.+.+.+|+ ....+|.||+|
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRV--RPEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--CTTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEE--cCCceEEEEECCCceeEEEeCEEEEC
Confidence 34444433 35789999999999997 5444 999888873 12379999999
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.45 E-value=0.24 Score=44.84 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=33.4
Q ss_pred CCCCeeEcce---eEEEEEeecCCCCeE-EEccCCCccccccEEEec
Q 023469 88 QPGVESKFGV---GVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~---~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla 130 (282)
..|++|++++ +|.+|.. .+++|. |.+.+|+.+ .+|.||+|
T Consensus 173 ~~Gv~i~~~t~~~~V~~i~~--~~~~v~gV~t~~G~~i-~Ad~VV~A 216 (438)
T 3dje_A 173 RMGVKFVTGTPQGRVVTLIF--ENNDVKGAVTADGKIW-RAERTFLC 216 (438)
T ss_dssp HTTCEEEESTTTTCEEEEEE--ETTEEEEEEETTTEEE-ECSEEEEC
T ss_pred hcCCEEEeCCcCceEEEEEe--cCCeEEEEEECCCCEE-ECCEEEEC
Confidence 3578999999 9999987 567787 888888543 79999999
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=89.81 E-value=0.42 Score=42.02 Aligned_cols=46 Identities=15% Similarity=0.213 Sum_probs=35.3
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.|.+.+. ..+++++.+++|.+|.. .+++|.+.+.+|+ + .+|.||+|
T Consensus 154 ~l~~~~~-~~G~~i~~~~~V~~i~~--~~~~~~v~~~~g~-~-~a~~vV~a 199 (372)
T 2uzz_A 154 TWIQLAK-EAGCAQLFNCPVTAIRH--DDDGVTIETADGE-Y-QAKKAIVC 199 (372)
T ss_dssp HHHHHHH-HTTCEEECSCCEEEEEE--CSSSEEEEESSCE-E-EEEEEEEC
T ss_pred HHHHHHH-HCCCEEEcCCEEEEEEE--cCCEEEEEECCCe-E-EcCEEEEc
Confidence 3444333 35788999999999997 6667999887775 3 79999999
No 43
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=89.70 E-value=0.89 Score=40.59 Aligned_cols=49 Identities=16% Similarity=0.047 Sum_probs=38.7
Q ss_pred hHHHHHHhcCC-CCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 79 NSICKALCHQP-GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l-~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..+.+.|.+.+ +++|+++++|.+|+. .+++|.+.+.+|+.+ .+|.||.|
T Consensus 99 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~ad~vV~A 148 (397)
T 2vou_A 99 DSIYGGLYELFGPERYHTSKCLVGLSQ--DSETVQMRFSDGTKA-EANWVIGA 148 (397)
T ss_dssp HHHHHHHHHHHCSTTEETTCCEEEEEE--CSSCEEEEETTSCEE-EESEEEEC
T ss_pred HHHHHHHHHhCCCcEEEcCCEEEEEEe--cCCEEEEEECCCCEE-ECCEEEEC
Confidence 45555555433 578999999999997 677899998888654 79999999
No 44
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=88.97 E-value=0.31 Score=45.98 Aligned_cols=60 Identities=25% Similarity=0.407 Sum_probs=43.0
Q ss_pred cEEeCCCchHHHHHHhcCCCC--eeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 71 KYVGVPGMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 71 ~yvg~~Gm~~l~~~La~~l~~--~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.|...+-+....+..++..++ +++++++|.++++...++.|.|.+++|+.+ .||.||+|.
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i-~ad~lV~At 143 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVY-RAKYVVNAV 143 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEE-EEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEE-EeCEEEECC
Confidence 344444444555555665665 799999999999833334899999888754 799999993
No 45
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.70 E-value=0.35 Score=41.89 Aligned_cols=48 Identities=8% Similarity=-0.043 Sum_probs=37.4
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEecC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla~ 131 (282)
...+.+++..+++++++++|.+|++ .++.|. +.+++| .+ .||.||+|.
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g-~~-~~d~vV~At 128 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSH--FGERLRVVARDGR-QW-LARAVISAT 128 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEE--ETTEEEEEETTSC-EE-EEEEEEECC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEE--CCCcEEEEEeCCC-EE-EeCEEEECC
Confidence 3334444556788999999999997 677899 998887 43 799999994
No 46
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.65 E-value=0.68 Score=41.40 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=39.2
Q ss_pred hHHHHHHhcCC-CCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 79 NSICKALCHQP-GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~~l-~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..|.+.|.+.+ +.+|+++++|.+|+. .+++|.+++.+|+.+ .+|.||.|+
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~ad~vV~Ad 178 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEP--GKKKWTLTFENKPSE-TADLVILAN 178 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEE--CSSSEEEEETTSCCE-EESEEEECS
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEE--CCCEEEEEECCCcEE-ecCEEEECC
Confidence 44566666654 257999999999997 667899998888654 799999994
No 47
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.46 E-value=0.56 Score=41.07 Aligned_cols=45 Identities=4% Similarity=0.050 Sum_probs=35.4
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+.+++..+++++++++|.+|.+ .+++|.|.+.+|. + .||.||+|.
T Consensus 95 ~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~-~-~~d~vVlAt 139 (369)
T 3d1c_A 95 QVVANHYELNIFENTVVTNISA--DDAYYTIATTTET-Y-HADYIFVAT 139 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--CSSSEEEEESSCC-E-EEEEEEECC
T ss_pred HHHHHHcCCeEEeCCEEEEEEE--CCCeEEEEeCCCE-E-EeCEEEECC
Confidence 3344456788999999999997 6668999887774 3 799999994
No 48
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.28 E-value=0.6 Score=41.64 Aligned_cols=39 Identities=28% Similarity=0.256 Sum_probs=33.1
Q ss_pred CCeeEcceeEEEEEeecCCCCe--EEEccCCCccccccEEEecC
Q 023469 90 GVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~~~w--~l~~~~G~~~~~~d~VVla~ 131 (282)
+++|+++++|.+|+. ++++| .+.+.+|+.+ .+|.||.|+
T Consensus 122 gv~i~~~~~v~~i~~--~~~~v~g~v~~~~g~~~-~ad~vV~Ad 162 (399)
T 2x3n_A 122 TVEMLFETRIEAVQR--DERHAIDQVRLNDGRVL-RPRVVVGAD 162 (399)
T ss_dssp TEEEECSCCEEEEEE--CTTSCEEEEEETTSCEE-EEEEEEECC
T ss_pred CcEEEcCCEEEEEEE--cCCceEEEEEECCCCEE-ECCEEEECC
Confidence 678999999999997 67788 8988888654 799999993
No 49
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.21 E-value=1.1 Score=39.47 Aligned_cols=68 Identities=18% Similarity=-0.015 Sum_probs=45.9
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCCcchhhhhcCCCCCCCCCcchHHHHHh-ccCCCc
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKL-EEIPVN 167 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~pa~~~~~ll~~p~~~~~~~~~~~~~~l-~~v~~~ 167 (282)
.+++++++++|.+|.. .+++|.|.+++| .+ .+|.||+| +.... ..+...+ ..++..
T Consensus 177 ~g~~i~~~~~v~~i~~--~~~~~~v~~~~g-~~-~a~~vV~A---~G~~s----------------~~l~~~~~~~~~~~ 233 (382)
T 1ryi_A 177 LGAEIFEHTPVLHVER--DGEALFIKTPSG-DV-WANHVVVA---SGVWS----------------GMFFKQLGLNNAFL 233 (382)
T ss_dssp TTCEEETTCCCCEEEC--SSSSEEEEETTE-EE-EEEEEEEC---CGGGT----------------HHHHHHTTCCCCCE
T ss_pred CCCEEEcCCcEEEEEE--ECCEEEEEcCCc-eE-EcCEEEEC---CChhH----------------HHHHHhcCCCCcee
Confidence 4788999999999986 667888887777 43 79999999 33321 1222222 134566
Q ss_pred ceeEEEEeccCC
Q 023469 168 PCFALMLAFSEP 179 (282)
Q Consensus 168 p~~~v~l~~~~~ 179 (282)
|+...++.++.+
T Consensus 234 ~~~g~~~~~~~~ 245 (382)
T 1ryi_A 234 PVKGECLSVWND 245 (382)
T ss_dssp EEEEEEEEEECC
T ss_pred ccceEEEEECCC
Confidence 777777777654
No 50
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.21 E-value=0.81 Score=40.50 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=41.4
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..|-+.|.+.++.+|+++++|.+++. .+++++.+.+++|+.. .+|.||-|+
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~-~~~~~v~v~~~dG~~~-~adlvVgAD 162 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEH-IENGGIKIFFADGSHE-NVDVLVGAD 162 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEE-CTTSCEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeE-cCCCeEEEEECCCCEE-EeeEEEECC
Confidence 35777788878778999999999986 3455689999999764 799999994
No 51
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=88.07 E-value=0.51 Score=37.00 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=31.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..+++++++ +|.+++. .+++|.+.+++| .+ .+|.||+|
T Consensus 68 ~~gv~v~~~-~v~~i~~--~~~~~~v~~~~g-~i-~ad~vI~A 105 (180)
T 2ywl_A 68 RYGAEVRPG-VVKGVRD--MGGVFEVETEEG-VE-KAERLLLC 105 (180)
T ss_dssp HTTCEEEEC-CCCEEEE--CSSSEEEECSSC-EE-EEEEEEEC
T ss_pred HcCCEEEeC-EEEEEEE--cCCEEEEEECCC-EE-EECEEEEC
Confidence 357889999 9999997 667799988888 43 79999999
No 52
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=87.73 E-value=0.56 Score=42.67 Aligned_cols=56 Identities=16% Similarity=0.289 Sum_probs=41.5
Q ss_pred CCchHHHHHHhcC---CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCC
Q 023469 76 PGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135 (282)
Q Consensus 76 ~Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~p 135 (282)
.....+.+.|.+. .+++|+++++|.+|.. .+++|.|.+.+| .+ .+|.||+|+-+.+
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~--~~~~~~V~~~~g-~i-~ad~VIlAtG~~S 187 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVER--TASGFRVTTSAG-TV-DAASLVVASGGKS 187 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE--ETTEEEEEETTE-EE-EESEEEECCCCSS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE--eCCEEEEEECCc-EE-EeeEEEECCCCcc
Confidence 3445666655543 3789999999999987 666799988887 43 7999999954444
No 53
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=87.53 E-value=0.61 Score=41.17 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=31.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+++++++++|.+|+. .+++|.+.+++| .+ .+|.||+|
T Consensus 163 ~Gv~i~~~~~v~~i~~--~~~~~~v~~~~g-~~-~a~~vV~A 200 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDI--SPDSVKIETANG-SY-TADKLIVS 200 (389)
T ss_dssp TTCEEECSCCEEEEEE--CSSCEEEEETTE-EE-EEEEEEEC
T ss_pred CCCEEEcCcEEEEEEe--cCCeEEEEeCCC-EE-EeCEEEEe
Confidence 4788999999999997 666799887766 33 79999999
No 54
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=87.53 E-value=0.43 Score=43.53 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=34.1
Q ss_pred HHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC---CC---ccccccEEEecCC
Q 023469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ---SLGQFNGVVASDK 132 (282)
Q Consensus 84 ~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~---~~~~~d~VVla~~ 132 (282)
..++..+..++++++|.+|+. .+++|.|.+.+ |+ . ..||.||+|+-
T Consensus 123 ~~~~~~~~~i~~~t~V~~v~~--~~~~~~V~~~~~~~G~~~~~-~~~d~VVvAtG 174 (447)
T 2gv8_A 123 IYAQPLLPFIKLATDVLDIEK--KDGSWVVTYKGTKAGSPISK-DIFDAVSICNG 174 (447)
T ss_dssp HHHGGGGGGEECSEEEEEEEE--ETTEEEEEEEESSTTCCEEE-EEESEEEECCC
T ss_pred HHHHHhhCeEEeCCEEEEEEe--CCCeEEEEEeecCCCCeeEE-EEeCEEEECCC
Confidence 334344557999999999987 56789998765 65 3 37999999943
No 55
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=87.48 E-value=0.55 Score=41.82 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=35.0
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..|.+.+. ..+++|+++++|.+|.. ++++|.+.+++|+ + .+|.||+|
T Consensus 157 ~~l~~~a~-~~Gv~i~~~~~V~~i~~--~~~~v~v~t~~g~-i-~a~~VV~A 203 (397)
T 2oln_A 157 AALFTLAQ-AAGATLRAGETVTELVP--DADGVSVTTDRGT-Y-RAGKVVLA 203 (397)
T ss_dssp HHHHHHHH-HTTCEEEESCCEEEEEE--ETTEEEEEESSCE-E-EEEEEEEC
T ss_pred HHHHHHHH-HcCCEEECCCEEEEEEE--cCCeEEEEECCCE-E-EcCEEEEc
Confidence 34444433 35789999999999987 5667988876663 3 79999999
No 56
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.39 E-value=0.6 Score=44.12 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=38.2
Q ss_pred hHHHHHHhcCCCC--eeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 79 NSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~--~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
....+.+++..+. +++++++|.++++....+.|.|.+++|+.+ .||.||+|
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i-~ad~lV~A 154 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEV-SARFLVVA 154 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEEC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEE-EeCEEEEC
Confidence 3344455555554 799999999999733344899999888754 79999999
No 57
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=86.49 E-value=0.68 Score=42.30 Aligned_cols=52 Identities=25% Similarity=0.269 Sum_probs=37.7
Q ss_pred hHHHHHHhc---CCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecCCC
Q 023469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKN 133 (282)
Q Consensus 79 ~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~~~ 133 (282)
..+.+.|.+ ..+++|+++++|.+|.. .+++ |.|.+.+|+.+ .+|.||+|+-+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~--~~~~v~~V~~~~G~~i-~Ad~VVlAtGg 189 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEY--ENGQTKAVILQTGEVL-ETNHVVIAVGG 189 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTCCEE-ECSCEEECCCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEe--cCCcEEEEEECCCCEE-ECCEEEECCCC
Confidence 444444443 25789999999999986 4455 88888888643 78999999533
No 58
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.40 E-value=0.81 Score=40.35 Aligned_cols=38 Identities=21% Similarity=0.079 Sum_probs=31.8
Q ss_pred CCCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla 130 (282)
.+++++++++|.+|.. .+++|. |.+.+| .+ .+|.||+|
T Consensus 162 ~Gv~i~~~~~v~~i~~--~~~~v~gv~~~~g-~i-~a~~VV~A 200 (382)
T 1y56_B 162 YGAKLLEYTEVKGFLI--ENNEIKGVKTNKG-II-KTGIVVNA 200 (382)
T ss_dssp TTCEEECSCCEEEEEE--SSSBEEEEEETTE-EE-ECSEEEEC
T ss_pred CCCEEECCceEEEEEE--ECCEEEEEEECCc-EE-ECCEEEEC
Confidence 5789999999999997 667887 887777 33 79999999
No 59
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.04 E-value=0.3 Score=46.20 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=38.9
Q ss_pred chHHHHHHhcCCCC--eeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 78 MNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 78 m~~l~~~La~~l~~--~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+....+.+++..+. +++++++|.++++...++.|.|.+++|+.+ .||.||+|.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~lV~At 143 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVV-TCRFLISAT 143 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEE-EEEEEEECC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEE-EeCEEEECc
Confidence 34444455554443 789999999998733445899999888654 799999993
No 60
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=84.61 E-value=1.1 Score=41.39 Aligned_cols=42 Identities=12% Similarity=0.007 Sum_probs=33.7
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+..|++++++++|.+|+. .++++.+...+|+.+ .+|.||+|.
T Consensus 234 ~~~GV~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~aD~Vv~a~ 275 (499)
T 1xdi_A 234 AERGVRLFKNARAASVTR--TGAGVLVTMTDGRTV-EGSHALMTI 275 (499)
T ss_dssp HHTTCEEETTCCEEEEEE--CSSSEEEEETTSCEE-EESEEEECC
T ss_pred HHCCCEEEeCCEEEEEEE--eCCEEEEEECCCcEE-EcCEEEECC
Confidence 346789999999999986 556688877777654 799999993
No 61
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=84.36 E-value=1.2 Score=39.71 Aligned_cols=41 Identities=17% Similarity=0.158 Sum_probs=33.6
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
+..+++++++++|.+|+. .++++.+.+.+|+.+ .+|.||+|
T Consensus 198 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~~i-~~d~vv~a 238 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKK--AGEGLEAHLSDGEVI-PCDLVVSA 238 (384)
T ss_dssp HTTTCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEEC
T ss_pred HHcCCEEEeCCEEEEEEe--cCCEEEEEECCCCEE-ECCEEEEC
Confidence 346789999999999986 556788888888654 79999999
No 62
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=84.03 E-value=1 Score=40.30 Aligned_cols=48 Identities=27% Similarity=0.223 Sum_probs=36.5
Q ss_pred HHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 81 ICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 81 l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
|.+.|.+.+. ++|+++++|.+|+. .+++|.+.+.+|+.+ .+|.||.|+
T Consensus 129 l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~a~~vV~Ad 177 (407)
T 3rp8_A 129 LQREMLDYWGRDSVQFGKRVTRCEE--DADGVTVWFTDGSSA-SGDLLIAAD 177 (407)
T ss_dssp HHHHHHHHHCGGGEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHhCCcCEEEECCEEEEEEe--cCCcEEEEEcCCCEE-eeCEEEECC
Confidence 4444443322 67999999999997 677899999888754 799999993
No 63
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=83.45 E-value=1.5 Score=37.44 Aligned_cols=40 Identities=8% Similarity=0.014 Sum_probs=33.0
Q ss_pred CCCCeeEcceeEEEEEeecCCC-CeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+.+++++++|.++.+ .++ .|.+.+++|+ + .||.||+|.
T Consensus 79 ~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~-~-~~d~vVlAt 119 (332)
T 3lzw_A 79 KFDQTICLEQAVESVEK--QADGVFKLVTNEET-H-YSKTVIITA 119 (332)
T ss_dssp TSCCEEECSCCEEEEEE--CTTSCEEEEESSEE-E-EEEEEEECC
T ss_pred HhCCcEEccCEEEEEEE--CCCCcEEEEECCCE-E-EeCEEEECC
Confidence 45788999999999997 444 7999988886 3 799999994
No 64
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=83.21 E-value=1.2 Score=41.85 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=36.7
Q ss_pred HHHHHHhcCCC--CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 80 SICKALCHQPG--VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~--~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
...+.+++..+ .+++++++|.++++..+++.|.|.+++|+.+ .+|.||+|+
T Consensus 98 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~vV~At 150 (542)
T 1w4x_A 98 RYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRI-RARYLIMAS 150 (542)
T ss_dssp HHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECC
T ss_pred HHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEE-EeCEEEECc
Confidence 33344444443 5799999999998732335799998888654 799999994
No 65
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=82.62 E-value=1.4 Score=40.34 Aligned_cols=45 Identities=18% Similarity=0.064 Sum_probs=35.1
Q ss_pred HHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 84 ~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
...+..+++++++++|.+|+. .+++..+...+|+.+ .+|.||+|.
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g~~i-~aD~Vv~a~ 254 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEG--ENGKVARVITDKRTL-DADLVILAA 254 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEE--SSSBEEEEEESSCEE-ECSEEEECS
T ss_pred HHHHhcCCEEEeCCEEEEEEc--cCCeEEEEEeCCCEE-EcCEEEECC
Confidence 333446789999999999986 566777777788654 799999993
No 66
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=82.53 E-value=1.3 Score=40.93 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.6
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|.+|+. .++++.+.+.+|+.+ .+|.||+|.
T Consensus 245 ~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~aD~Vi~A~ 284 (484)
T 3o0h_A 245 KGISIIYEATVSQVQS--TENCYNVVLTNGQTI-CADRVMLAT 284 (484)
T ss_dssp HTCEEESSCCEEEEEE--CSSSEEEEETTSCEE-EESEEEECC
T ss_pred CCCEEEeCCEEEEEEe--eCCEEEEEECCCcEE-EcCEEEEee
Confidence 4788999999999997 667788888888654 799999993
No 67
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=82.41 E-value=1.1 Score=40.46 Aligned_cols=46 Identities=26% Similarity=0.370 Sum_probs=35.0
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+...+..++++++++.|.+|+. +++...+.+.+|+.+ .+|.||++.
T Consensus 192 ~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i-~aD~Vv~a~ 237 (410)
T 3ef6_A 192 RGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSF-VADSALICV 237 (410)
T ss_dssp HHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEE-ECSEEEECS
T ss_pred HHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEE-EcCEEEEee
Confidence 3333345789999999999986 555567888888765 799999993
No 68
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=82.32 E-value=1.8 Score=38.95 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=39.9
Q ss_pred CchHHHHHHhcC---CCCeeEcceeEEEEEeecC----CCCeEEEccCCCccccccEEEecCCCCCc
Q 023469 77 GMNSICKALCHQ---PGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVASDKNVVS 136 (282)
Q Consensus 77 Gm~~l~~~La~~---l~~~v~~~~~V~~i~~~~~----~~~w~l~~~~G~~~~~~d~VVla~~~~pa 136 (282)
....+.+.|.+. .+++++++++|.+|.. + +++|.+.+++| .+ .+|.||+|+-+.+.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~--~~~g~~~~~~v~~~~g-~i-~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVER--IQNDEKVRFVLQVNST-QW-QCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEE--CCSCSSCCEEEEETTE-EE-EESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEc--ccCcCCCeEEEEECCC-EE-ECCEEEECCCCccC
Confidence 344555555433 4789999999999986 5 56799987766 33 79999999544443
No 69
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.12 E-value=1.2 Score=40.52 Aligned_cols=51 Identities=18% Similarity=0.119 Sum_probs=36.2
Q ss_pred chHHHHHHhcCCCCeeEcceeEEEEEeecC---CCCe--EEEccCCC----ccccccEEEecC
Q 023469 78 MNSICKALCHQPGVESKFGVGVGRFEWLED---KNLW--SVSGLDGQ----SLGQFNGVVASD 131 (282)
Q Consensus 78 m~~l~~~La~~l~~~v~~~~~V~~i~~~~~---~~~w--~l~~~~G~----~~~~~d~VVla~ 131 (282)
+....+..++.++.+++++++|.+|++ . ++.| .|.+.+|+ .+ .||.||+|.
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~--~~~~~~~~~~~V~~~~g~g~~~~~-~~d~lVlAt 188 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEP--MLSAGQVEALRVISRNADGEELVR-TTRALVVSP 188 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEE--EEETTEEEEEEEEEEETTSCEEEE-EESEEEECC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEE--ecCCCceEEEEEEEecCCCceEEE-EeCEEEECC
Confidence 334455556667778999999999987 3 4456 66655553 33 799999994
No 70
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.95 E-value=1.7 Score=39.09 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=36.1
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCe-EEEccCCCccccccEEEecC
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVla~ 131 (282)
....+.+.+..+++++++++|.+|.. .+++. .+.+.+|+.+ .+|.||++.
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~v~l~dG~~i-~aD~Vv~a~ 247 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEG--DGTKVTGVRMQDGSVI-PADIVIVGI 247 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEE--SSSBEEEEEESSSCEE-ECSEEEECS
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 33334444456889999999999986 44443 6777788765 799999994
No 71
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=81.07 E-value=2.2 Score=37.68 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=30.6
Q ss_pred CCCeeEcceeEEEEEeecCCC-CeEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVla 130 (282)
.+++++++++|.+|.. .++ .|.+.+.+| .+ .+|.||+|
T Consensus 187 ~g~~i~~~~~v~~i~~--~~~~~~~v~~~~g-~~-~a~~vV~a 225 (405)
T 2gag_B 187 MGVDIIQNCEVTGFIK--DGEKVTGVKTTRG-TI-HAGKVALA 225 (405)
T ss_dssp TTCEEECSCCEEEEEE--SSSBEEEEEETTC-CE-EEEEEEEC
T ss_pred CCCEEEcCCeEEEEEE--eCCEEEEEEeCCc-eE-ECCEEEEC
Confidence 5789999999999987 444 478887777 33 79999999
No 72
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=80.97 E-value=1.4 Score=37.83 Aligned_cols=40 Identities=15% Similarity=0.234 Sum_probs=32.3
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+.+++++++|.+|+. .++.|.+.+++|..+ .||.||+|.
T Consensus 78 ~~~~~~~~~~v~~i~~--~~~~~~v~~~~g~~~-~~~~lv~At 117 (335)
T 2zbw_A 78 FNPVYSLGERAETLER--EGDLFKVTTSQGNAY-TAKAVIIAA 117 (335)
T ss_dssp GCCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred cCCEEEeCCEEEEEEE--CCCEEEEEECCCCEE-EeCEEEECC
Confidence 4578899999999987 455799988777554 799999994
No 73
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=80.43 E-value=1.8 Score=40.89 Aligned_cols=50 Identities=16% Similarity=0.213 Sum_probs=36.4
Q ss_pred hHHHHHHhc---CCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecC
Q 023469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+.+.|.+ ..+++|+++++|.+|.. .+++ +.|.+++|+.+ .+|.||+|+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~--~~~~v~gV~l~~G~~i-~Ad~VVlA~ 273 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEEI-KSRHVVLAV 273 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE--SSSBEEEEEETTSCEE-ECSCEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE--eCCEEEEEEECCCCEE-ECCEEEECC
Confidence 444444433 25789999999999987 4444 56888888654 799999993
No 74
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=80.13 E-value=2.5 Score=38.48 Aligned_cols=51 Identities=10% Similarity=-0.080 Sum_probs=36.5
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecCCCCC
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~~~~p 135 (282)
..+...+..+++++++++|.+|+. .++++.+.+++| .+ .+|.||+|.--.|
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g-~i-~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEE--TANGIVLETSEQ-EI-SCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEE--CSSCEEEEESSC-EE-EESEEEECSCCBC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEc--cCCeEEEEECCC-EE-EeCEEEECcCCCC
Confidence 333344456789999999999986 566677777666 43 7999999943334
No 75
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=79.76 E-value=2.3 Score=36.05 Aligned_cols=45 Identities=9% Similarity=0.085 Sum_probs=33.6
Q ss_pred hcCCCCeeEcceeEEEEEeecC-CCCeEEEccCCCccccccEEEecC
Q 023469 86 CHQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 86 a~~l~~~v~~~~~V~~i~~~~~-~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
++..+++++++++|..+.+... ++.|.+.+++|+.+ .||.||+|.
T Consensus 66 ~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~-~~~~lv~At 111 (310)
T 1fl2_A 66 VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVL-KARSIIVAT 111 (310)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEE-EEEEEEECC
T ss_pred HHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEE-EeCEEEECc
Confidence 3456788999999999975111 23799988888554 799999994
No 76
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=79.30 E-value=2.2 Score=39.43 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=35.0
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
....+..++++++++.|.+|+. .++...+.+.+|+.+ .+|.||++.
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~--~~~~~~v~l~dG~~i-~aD~Vv~a~ 278 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGV--SSGKLLIKLKDGRKV-ETDHIVAAV 278 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHhcCCEEEeCCEEEEEEe--cCCeEEEEECCCCEE-ECCEEEECC
Confidence 3334456899999999999986 445567777788654 799999993
No 77
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=79.26 E-value=1.5 Score=40.02 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=32.3
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|.+|+. .++++.+.+++|+.+ .+|.||+|.
T Consensus 221 ~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~~D~vv~A~ 260 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVP--EAKGARVELEGGEVL-EADRVLVAV 260 (455)
T ss_dssp HTCEEECSCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECS
T ss_pred CCCEEEECCEEEEEEE--eCCEEEEEECCCeEE-EcCEEEECc
Confidence 4789999999999986 556687877677654 799999994
No 78
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=78.46 E-value=3.3 Score=36.04 Aligned_cols=41 Identities=7% Similarity=0.090 Sum_probs=32.9
Q ss_pred CCCCeeEcceeEEEEEeecCCC-CeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+.+++++++|.+|.+ .++ .|.+.+.+|+.+ .||.||+|.
T Consensus 86 ~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~~~-~~~~li~At 127 (360)
T 3ab1_A 86 RYNPDVVLNETVTKYTK--LDDGTFETRTNTGNVY-RSRAVLIAA 127 (360)
T ss_dssp TTCCEEECSCCEEEEEE--CTTSCEEEEETTSCEE-EEEEEEECC
T ss_pred HhCCEEEcCCEEEEEEE--CCCceEEEEECCCcEE-EeeEEEEcc
Confidence 35678999999999997 443 799988888554 799999994
No 79
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=78.37 E-value=2.7 Score=38.18 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=31.9
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEcc---CCCc-cccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQS-LGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G~~-~~~~d~VVla 130 (282)
.+++++++++|.+++. .+++|.|... +|+. ...+|.||+|
T Consensus 329 ~~v~i~~~~~v~~v~~--~~~~~~v~~~~~~~g~~~~~~~D~Vv~A 372 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA--TAQGIELALRDAGSGELSVETYDAVILA 372 (463)
T ss_dssp CCSEEETTEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESEEEEC
T ss_pred CCeEEEeCCEEEEEEe--cCCEEEEEEEEcCCCCeEEEECCEEEEe
Confidence 4678999999999987 6678988765 5652 1379999999
No 80
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=77.72 E-value=2.2 Score=38.11 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=33.0
Q ss_pred HhcCCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecC
Q 023469 85 LCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 85 La~~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
+.+..+++++++++|.+|.. .+++ ..+.+++|+.+ .+|.||++.
T Consensus 193 ~l~~~GV~i~~~~~v~~i~~--~~~~v~~V~~~dG~~i-~aD~Vv~a~ 237 (404)
T 3fg2_P 193 RHSGAGIRMHYGVRATEIAA--EGDRVTGVVLSDGNTL-PCDLVVVGV 237 (404)
T ss_dssp HHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSEEEECC
T ss_pred HHHhCCcEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEECc
Confidence 33456889999999999986 3333 45777788765 799999993
No 81
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.62 E-value=2.2 Score=39.80 Aligned_cols=47 Identities=21% Similarity=0.146 Sum_probs=35.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCC----eEEEccCCC-ccccccEEEecCCCCCcc
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL----WSVSGLDGQ-SLGQFNGVVASDKNVVSP 137 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~----w~l~~~~G~-~~~~~d~VVla~~~~pa~ 137 (282)
..|++++++++|.+|.. .+++ +.+.+++|+ .+ .+|.||+|.-..|..
T Consensus 267 ~~GV~i~~~~~V~~i~~--~~~~~v~~~~v~~~~G~~~i-~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEE--DANGRVQAVVAMTPNGEMRI-ETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEE--CTTSBEEEEEEEETTEEEEE-ECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEE--cCCCceEEEEEEECCCcEEE-EcCEEEECcCCccCC
Confidence 46789999999999986 4455 778887885 43 799999994333443
No 82
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.62 E-value=2.9 Score=35.36 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=31.3
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..++++++ ++|.+|.+ .++.|.+.+++|..+ .||.||+|.
T Consensus 82 ~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~~-~~d~lvlAt 121 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIEN--RGDEFVVKTKRKGEF-KADSVILGI 121 (323)
T ss_dssp TTTCCEEE-SCEEEEEE--C--CEEEEESSSCEE-EEEEEEECC
T ss_pred HcCCEEEE-EEEEEEEe--cCCEEEEEECCCCEE-EcCEEEECc
Confidence 45678888 89999997 677899998887654 799999994
No 83
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=77.33 E-value=2.3 Score=38.87 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=33.0
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCC-ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+++..+.+++|+ .+ .+|.||+|.
T Consensus 219 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~G~~~i-~~D~vv~a~ 260 (463)
T 2r9z_A 219 AQGIETHLEFAVAALER--DAQGTTLVAQDGTRLE-GFDSVIWAV 260 (463)
T ss_dssp HTTCEEESSCCEEEEEE--ETTEEEEEETTCCEEE-EESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCeEEEEEeCCcEEE-EcCEEEECC
Confidence 45789999999999986 4455788888886 44 799999993
No 84
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=77.11 E-value=3.1 Score=36.74 Aligned_cols=50 Identities=14% Similarity=0.029 Sum_probs=35.1
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc-cCCCc-cccccEEEecC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~~-~~~~d~VVla~ 131 (282)
.|.+.+.+ .+++|+++++|.+|+. .++++|.+.+ ++|+. ...+|.||.|+
T Consensus 108 ~L~~~~~~-~g~~i~~~~~v~~i~~-~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 108 DLMEAREA-CGATTVYQAAEVRLHD-LQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp HHHHHHHH-TTCEEESSCEEEEEEC-TTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred HHHHHHHh-cCCeEEeceeEEEEEE-ecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 34444443 4788999999999986 2235688887 67751 23799999994
No 85
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=76.96 E-value=2.1 Score=34.12 Aligned_cols=80 Identities=10% Similarity=-0.077 Sum_probs=46.0
Q ss_pred CccceEecCCCceEEEeeCCCCCCCCCCCCeEEEEeCHHHHHHhHhhcCCCCCChhhHHHHHHHHHHHHHhcCCCCCCcc
Q 023469 184 PVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPI 263 (282)
Q Consensus 184 ~~~g~~~~~~~~l~wi~~~sskpgr~~~~~~~v~~~~~~~s~~~~~~~~~~~~~~~~~e~v~~~ll~~l~~l~~~~~~P~ 263 (282)
++.|-....+.++.++...|...+-......++.......++..... +++++++.+++.|+++++....|.
T Consensus 8 gi~Gg~~~td~pi~~i~d~S~~~~~~g~~~~L~~~~~g~~A~~~~~l---------~~~e~~~~~l~~L~~~~g~~~~~~ 78 (181)
T 2e1m_C 8 NAYGGGSTTDNPNRFMYYPSHPVPGTQGGVVLAAYSWSDDAARWDSF---------DDAERYGYALENLQSVHGRRIEVF 78 (181)
T ss_dssp CCCSCEEEESSTTBEEECCSSCCTTCSCEEEEEEEEEHHHHHHHTTS---------CTTTTHHHHHHHHHHHHCGGGGGT
T ss_pred CccceeEecCCCeEEEEECCCCcCCCCCCEEEEEEcCChHHHHHHcC---------CHHHHHHHHHHHHHHHhCCCcHhh
Confidence 44543232335788887655432101011244455556666554444 668889999999998864222444
Q ss_pred -ee--eeeccCc
Q 023469 264 -FR--KAHRWYR 272 (282)
Q Consensus 264 -~~--~~~rW~~ 272 (282)
.. ..++|..
T Consensus 79 ~~~~~~~~~W~~ 90 (181)
T 2e1m_C 79 YTGAGQTQSWLR 90 (181)
T ss_dssp EEEEEEEEESSS
T ss_pred ccCcceecccCC
Confidence 45 7899964
No 86
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=76.57 E-value=3 Score=38.78 Aligned_cols=46 Identities=13% Similarity=0.036 Sum_probs=33.8
Q ss_pred HHHHhcCCCCeeEcceeEEEEEeecCCC----CeEEEccCC---CccccccEEEecC
Q 023469 82 CKALCHQPGVESKFGVGVGRFEWLEDKN----LWSVSGLDG---QSLGQFNGVVASD 131 (282)
Q Consensus 82 ~~~La~~l~~~v~~~~~V~~i~~~~~~~----~w~l~~~~G---~~~~~~d~VVla~ 131 (282)
.+.+.+ .+++|+++++|.+|+. +++ +|.+...++ .. ..+|.||.|+
T Consensus 127 ~~~a~~-~gv~i~~~~~v~~i~~--~~~~~~~~v~v~~~~~~~~~~-i~a~~vV~Ad 179 (535)
T 3ihg_A 127 LAQARK-HGGAIRFGTRLLSFRQ--HDDDAGAGVTARLAGPDGEYD-LRAGYLVGAD 179 (535)
T ss_dssp HHHHHH-TTCEEESSCEEEEEEE--ECGGGCSEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred HHHHHh-CCCEEEeCCEEEEEEE--CCCCccccEEEEEEcCCCeEE-EEeCEEEECC
Confidence 333333 4789999999999997 556 788877655 33 3789999994
No 87
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=76.56 E-value=3 Score=38.67 Aligned_cols=42 Identities=19% Similarity=-0.016 Sum_probs=33.1
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCC--ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ--SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~--~~~~~d~VVla~ 131 (282)
..+++|+++++|.+|+. +++++.+.+.+|+ ....+|.||.|+
T Consensus 119 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~~~a~~vVgAD 162 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTD--EGDHVVVEVEGPDGPRSLTTRYVVGCD 162 (499)
T ss_dssp HTTCEEEESCEEEEEEE--CSSCEEEEEECSSCEEEEEEEEEEECC
T ss_pred hCCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCcEEEEeCEEEEcc
Confidence 35789999999999997 6778988877663 123789999994
No 88
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=76.22 E-value=3.3 Score=38.32 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=32.5
Q ss_pred CCCCeeEcceeEEEEEeecCC-CCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~-~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+ +...+.+.+|+.+ .+|.||++.
T Consensus 247 ~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~i-~~D~vv~a~ 288 (495)
T 2wpf_A 247 ANGIEIMTNENPAKVSL--NTDGSKHVTFESGKTL-DVDVVMMAI 288 (495)
T ss_dssp HTTCEEEESCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred hCCCEEEeCCEEEEEEE--cCCceEEEEECCCcEE-EcCEEEECC
Confidence 45789999999999986 43 3477887788654 799999994
No 89
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=75.91 E-value=2.9 Score=38.54 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=32.5
Q ss_pred CCCCeeEcceeEEEEEeecCC-CCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~-~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+ +.+.+.+++|+.+ .+|.||+|.
T Consensus 243 ~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~i-~~D~vv~a~ 284 (490)
T 1fec_A 243 ANGINVRTHENPAKVTK--NADGTRHVVFESGAEA-DYDVVMLAI 284 (490)
T ss_dssp HTTEEEEETCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred hCCCEEEeCCEEEEEEE--cCCCEEEEEECCCcEE-EcCEEEEcc
Confidence 45788999999999986 44 3478888888654 799999993
No 90
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=75.40 E-value=2.9 Score=38.07 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=32.3
Q ss_pred CCCCeeEcceeEEEEEeecCCC-CeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .++ .+.+.+.+|+.+ .+|.||+|.
T Consensus 220 ~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~i-~~D~vv~a~ 261 (450)
T 1ges_A 220 AEGPQLHTNAIPKAVVK--NTDGSLTLELEDGRSE-TVDCLIWAI 261 (450)
T ss_dssp HHSCEEECSCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCcEEEEEECCCcEE-EcCEEEECC
Confidence 35789999999999986 443 378888888654 799999993
No 91
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=74.48 E-value=3.8 Score=37.36 Aligned_cols=41 Identities=10% Similarity=0.024 Sum_probs=32.5
Q ss_pred cCCCCeeEcceeEEEEEeecCCCC-eEEE-ccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNL-WSVS-GLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~-w~l~-~~~G~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|+. .+++ ..+. +++|+ + .+|.||+|.
T Consensus 222 ~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~g~-i-~aD~Vv~a~ 264 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSA--DADGRRVATTMKHGE-I-VADQVMLAL 264 (463)
T ss_dssp HHTTCEEECSCCEEEEEE--CTTSCEEEEESSSCE-E-EESEEEECS
T ss_pred HHCCCEEECCCEEEEEEE--cCCCEEEEEEcCCCe-E-EeCEEEEee
Confidence 346789999999999986 4444 6788 88886 4 899999983
No 92
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=74.29 E-value=3.6 Score=34.39 Aligned_cols=38 Identities=8% Similarity=-0.129 Sum_probs=29.1
Q ss_pred CCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 90 GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+++++ +++|.+|.+ .+++|.+.+++|+.+ .||.||+|.
T Consensus 71 ~v~~~-~~~v~~i~~--~~~~~~v~~~~g~~~-~~d~vviAt 108 (297)
T 3fbs_A 71 TIHWV-EGRVTDAKG--SFGEFIVEIDGGRRE-TAGRLILAM 108 (297)
T ss_dssp TEEEE-ESCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred CeEEE-EeEEEEEEE--cCCeEEEEECCCCEE-EcCEEEECC
Confidence 34443 569999997 667799998888654 799999994
No 93
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=74.01 E-value=2 Score=39.46 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=30.1
Q ss_pred CCCe--eEcceeEEEEEeecCCCCeEEEccC---CC-ccccccEEEecC
Q 023469 89 PGVE--SKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~--v~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVla~ 131 (282)
.+++ ++++++|.+|++...+++|.|...+ |+ ....||+||+|.
T Consensus 114 ~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 114 AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 3555 8999999999872222379998754 31 223799999994
No 94
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=73.49 E-value=3.9 Score=34.62 Aligned_cols=41 Identities=15% Similarity=0.320 Sum_probs=31.8
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+..++++++ ++|.+|.. .++.|.+...+|+.+ .||.||+|+
T Consensus 70 ~~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~~-~~~~vv~At 110 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSK--KDSHFVILAEDGKTF-EAKSVIIAT 110 (311)
T ss_dssp HTTSCEEEC-SCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred HHcCCEEEE-EEEEEEEE--cCCEEEEEEcCCCEE-ECCEEEECC
Confidence 345778888 78999987 566798877777654 799999994
No 95
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.23 E-value=3.1 Score=37.14 Aligned_cols=38 Identities=5% Similarity=0.118 Sum_probs=29.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|.+|++ .++ .+.+++|+.+ .||+||+|.
T Consensus 75 ~~i~~~~~~~V~~id~--~~~--~v~~~~g~~~-~yd~lvlAt 112 (385)
T 3klj_A 75 NNIKVITSEFATSIDP--NNK--LVTLKSGEKI-KYEKLIIAS 112 (385)
T ss_dssp TTCEEECSCCEEEEET--TTT--EEEETTSCEE-ECSEEEECC
T ss_pred CCCEEEeCCEEEEEEC--CCC--EEEECCCCEE-ECCEEEEec
Confidence 5678999999999986 443 5666777664 799999993
No 96
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=72.65 E-value=4 Score=37.27 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=31.5
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc-C--CC--ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-D--GQ--SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~-~--G~--~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .++++.+... + |+ .+ .+|.||+|.
T Consensus 222 ~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i-~~D~vv~a~ 267 (464)
T 2eq6_A 222 KEGIRVRTKTKAVGYEK--KKDGLHVRLEPAEGGEGEEV-VVDKVLVAV 267 (464)
T ss_dssp HTTCEEECSEEEEEEEE--ETTEEEEEEEETTCCSCEEE-EESEEEECS
T ss_pred hcCCEEEcCCEEEEEEE--eCCEEEEEEeecCCCceeEE-EcCEEEECC
Confidence 46789999999999986 4556777654 5 65 33 799999994
No 97
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=72.41 E-value=3 Score=38.63 Aligned_cols=42 Identities=17% Similarity=-0.008 Sum_probs=32.6
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCC--ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ--SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~--~~~~~d~VVla~ 131 (282)
..+++|+++++|.+|+. +++++.++..+|+ ....+|.||.|+
T Consensus 118 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTD--DGAGVTVEVRGPEGKHTLRAAYLVGCD 161 (500)
T ss_dssp HTTCEEEETCEEEEEEE--ETTEEEEEEEETTEEEEEEESEEEECC
T ss_pred HCCCEEECCcEEEEEEE--cCCeEEEEEEcCCCCEEEEeCEEEECC
Confidence 35789999999999987 6678888776653 123789999994
No 98
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=72.07 E-value=4.7 Score=37.21 Aligned_cols=41 Identities=15% Similarity=0.044 Sum_probs=32.2
Q ss_pred CCCCeeEcceeEEEEEeecCC-CCeEEEccCCCc-cccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQS-LGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~-~~w~l~~~~G~~-~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+ +...+.+++|+. + .+|.||++.
T Consensus 229 ~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~-~~D~vi~a~ 271 (500)
T 1onf_A 229 KNNINIVTFADVVEIKK--VSDKNLSIHLSDGRIYE-HFDHVIYCV 271 (500)
T ss_dssp HTTCEEECSCCEEEEEE--SSTTCEEEEETTSCEEE-EESEEEECC
T ss_pred hCCCEEEECCEEEEEEE--cCCceEEEEECCCcEEE-ECCEEEECC
Confidence 45789999999999986 43 347787778865 4 799999993
No 99
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=71.88 E-value=2.1 Score=38.35 Aligned_cols=39 Identities=8% Similarity=0.037 Sum_probs=25.8
Q ss_pred CCCCeeEcceeEE---------EEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 88 QPGVESKFGVGVG---------RFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~---------~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..+++++++++|. +|.. .+++|.|.+.+| .+ .+|.||+|
T Consensus 184 ~~Gv~i~~~~~v~~~~g~~~~~~i~~--~~~~v~v~~~~g-~i-~a~~VV~A 231 (405)
T 3c4n_A 184 GQGAGLLLNTRAELVPGGVRLHRLTV--TNTHQIVVHETR-QI-RAGVIIVA 231 (405)
T ss_dssp TTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EE-EEEEEEEC
T ss_pred HCCCEEEcCCEEEeccccccccceEe--eCCeEEEEECCc-EE-ECCEEEEC
Confidence 3578899999999 8876 566787777666 33 79999999
No 100
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=71.42 E-value=3.6 Score=37.77 Aligned_cols=41 Identities=7% Similarity=0.010 Sum_probs=31.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCC--eEEEccCC-CccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL--WSVSGLDG-QSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~--w~l~~~~G-~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+++ ..+.+++| +.+ .+|.||+|.
T Consensus 238 ~~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G~~~i-~~D~vv~a~ 281 (479)
T 2hqm_A 238 KEGINVHKLSKIVKVEK--NVETDKLKIHMNDSKSID-DVDELIWTI 281 (479)
T ss_dssp HHTCEEECSCCEEEEEE--CC-CCCEEEEETTSCEEE-EESEEEECS
T ss_pred hCCeEEEeCCEEEEEEE--cCCCcEEEEEECCCcEEE-EcCEEEECC
Confidence 35788999999999986 4444 67777788 444 799999993
No 101
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=70.48 E-value=4.6 Score=35.84 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=30.2
Q ss_pred CCCeeEcceeEEEEEeecCCCCe--EEEccCCCc-cccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLW--SVSGLDGQS-LGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w--~l~~~~G~~-~~~~d~VVla 130 (282)
.|++|+++++|.+|+. .++++ .+.+.+|+. ...+|.||.|
T Consensus 119 ~gv~i~~~~~v~~i~~--~~~~~~v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 119 QGVDVEYEVGVTDIKF--FGTDSVTTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp HTCEEECSEEEEEEEE--ETTEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred CCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 4789999999999987 55565 445567762 1379999999
No 102
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=70.45 E-value=4.8 Score=36.65 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=30.6
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEcc--CC--CccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL--DG--QSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~--~G--~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|+. .++++.+... +| +.+ .+|.||+|.
T Consensus 227 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~g~~~~i-~~D~vv~a~ 272 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTN--NGDSVSLEVEGKNGKRETV-TCEALLVSV 272 (468)
T ss_dssp HHTCCEEECSCEEEEEEE--CSSSEEEEEECC---EEEE-EESEEEECS
T ss_pred hcCCcEEEeCCEEEEEEE--cCCeEEEEEEcCCCceEEE-ECCEEEECC
Confidence 446789999999999986 5556777654 56 333 799999994
No 103
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=69.99 E-value=6.5 Score=35.86 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=30.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCC-eEEEc-----cCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSG-----LDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~-w~l~~-----~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+++ +.+.. .+|+.+ .+|.||++.
T Consensus 232 ~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~~~~~~i-~~D~vv~a~ 278 (474)
T 1zmd_A 232 KQGFKFKLNTKVTGATK--KSDGKIDVSIEAASGGKAEVI-TCDVLLVCI 278 (474)
T ss_dssp HTTCEEECSEEEEEEEE--CTTSCEEEEEEETTSCCCEEE-EESEEEECS
T ss_pred HCCCEEEeCceEEEEEE--cCCceEEEEEEecCCCCceEE-EcCEEEECc
Confidence 46789999999999986 5555 77763 345443 799999994
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=69.82 E-value=6.4 Score=32.13 Aligned_cols=37 Identities=14% Similarity=0.031 Sum_probs=27.9
Q ss_pred CCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEec
Q 023469 90 GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla 130 (282)
+++++ +++|.+|.. .+++ |.+.+.+|+.+ .+|.||+|
T Consensus 83 gv~i~-~~~v~~i~~--~~~~v~~v~~~~g~~i-~a~~VV~A 120 (232)
T 2cul_A 83 PLHLF-QATATGLLL--EGNRVVGVRTWEGPPA-RGEKVVLA 120 (232)
T ss_dssp TEEEE-ECCEEEEEE--ETTEEEEEEETTSCCE-ECSEEEEC
T ss_pred CcEEE-EeEEEEEEE--eCCEEEEEEECCCCEE-ECCEEEEC
Confidence 67777 679999986 4444 56777778654 79999999
No 105
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=69.27 E-value=5.6 Score=36.71 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=30.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEc---cCCCc-cccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQS-LGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~---~~G~~-~~~~d~VVla 130 (282)
.|++++.+++|.+|.. +++.|.+.+ .+|+. ...+|.||+|
T Consensus 162 ~Gv~i~~~~~V~~l~~--~~~~~~V~~~d~~~G~~~~i~A~~VV~A 205 (501)
T 2qcu_A 162 KGGEVLTRTRATSARR--ENGLWIVEAEDIDTGKKYSWQARGLVNA 205 (501)
T ss_dssp TTCEEECSEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESCEEEC
T ss_pred cCCEEEcCcEEEEEEE--eCCEEEEEEEECCCCCEEEEECCEEEEC
Confidence 5789999999999987 456788876 35641 2378999999
No 106
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=69.10 E-value=6.1 Score=33.59 Aligned_cols=40 Identities=10% Similarity=0.191 Sum_probs=31.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc---CCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G~~~~~~d~VVla~ 131 (282)
..++++++++ |.++.. .++.|.+.+. ++..+ .||.||+|.
T Consensus 96 ~~gv~i~~~~-v~~i~~--~~~~~~v~~~~~~~~~~~-~~d~vvlAt 138 (338)
T 3itj_A 96 KFGTEIITET-VSKVDL--SSKPFKLWTEFNEDAEPV-TTDAIILAT 138 (338)
T ss_dssp HTTCEEECSC-EEEEEC--SSSSEEEEETTCSSSCCE-EEEEEEECC
T ss_pred HcCCEEEEeE-EEEEEE--cCCEEEEEEEecCCCcEE-EeCEEEECc
Confidence 4578899999 999987 7778988763 45443 799999993
No 107
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=68.66 E-value=6.8 Score=34.40 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=33.2
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.|.+.+.+ .+++|+++++|.+|+. ++ .|.+.+|+.+ .+|.||.|+
T Consensus 112 ~L~~~~~~-~gv~i~~~~~v~~i~~----~~-~v~~~~g~~~-~ad~vV~Ad 156 (379)
T 3alj_A 112 ALVNRARA-LGVDISVNSEAVAADP----VG-RLTLQTGEVL-EADLIVGAD 156 (379)
T ss_dssp HHHHHHHH-TTCEEESSCCEEEEET----TT-EEEETTSCEE-ECSEEEECC
T ss_pred HHHHHHHh-cCCEEEeCCEEEEEEe----CC-EEEECCCCEE-EcCEEEECC
Confidence 34444443 5789999999999984 34 7877778654 799999993
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=68.49 E-value=3.9 Score=37.55 Aligned_cols=42 Identities=7% Similarity=-0.089 Sum_probs=31.0
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccC----CCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLD----GQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~----G~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|+. .+++..+.+.+ |+.+ .+|.||++.
T Consensus 237 ~~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~~g~~~-~~D~vv~a~ 282 (482)
T 1ojt_A 237 EYRFDNIMVNTKTVAVEP--KEDGVYVTFEGANAPKEPQ-RYDAVLVAA 282 (482)
T ss_dssp GGGEEEEECSCEEEEEEE--ETTEEEEEEESSSCCSSCE-EESCEEECC
T ss_pred HhcCCEEEECCEEEEEEE--cCCeEEEEEeccCCCceEE-EcCEEEECc
Confidence 345688999999999986 44556666555 5544 699999994
No 109
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=68.25 E-value=2.9 Score=39.56 Aligned_cols=40 Identities=25% Similarity=0.209 Sum_probs=32.6
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEc--cCC-CccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG--LDG-QSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~--~~G-~~~~~~d~VVla~ 131 (282)
.+++|+++++|.+|+. ++++|.+.. .+| +.+ .+|.||.|+
T Consensus 161 ~gv~i~~~~~v~~l~~--~~~~v~v~~~~~~G~~~~-~a~~vV~AD 203 (570)
T 3fmw_A 161 AGAEIPRGHEVTRLRQ--DAEAVEVTVAGPSGPYPV-RARYGVGCD 203 (570)
T ss_dssp HTEECCBSCEEEECCB--CSSCEEEEEEETTEEEEE-EESEEEECS
T ss_pred CCCEEEeCCEEEEEEE--cCCeEEEEEEeCCCcEEE-EeCEEEEcC
Confidence 4788999999999997 777888877 567 343 799999994
No 110
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=67.83 E-value=7.7 Score=32.66 Aligned_cols=50 Identities=22% Similarity=0.169 Sum_probs=35.1
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC---CCc-cccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQS-LGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~~-~~~~d~VVla 130 (282)
..+.+.+.+..+++++++++|.++.. +++...+...+ |+. ...+|.||++
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a 246 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIE 246 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEec--cCceeEEEEEECCCCceEEEEcCEEEEE
Confidence 35667777666889999999999986 44433454443 651 2379999999
No 111
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=66.13 E-value=6 Score=36.08 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=30.3
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCC--CccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDG--QSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G--~~~~~~d~VVla 130 (282)
..+++++++++|.+++. .+++..+...++ .....+|.||++
T Consensus 233 ~~Gv~v~~~~~v~~i~~--~~~~~~v~~~~~~g~~~~~~D~vi~a 275 (476)
T 3lad_A 233 KQGLKILLGARVTGTEV--KNKQVTVKFVDAEGEKSQAFDKLIVA 275 (476)
T ss_dssp HTTEEEEETCEEEEEEE--CSSCEEEEEESSSEEEEEEESEEEEC
T ss_pred hCCCEEEECCEEEEEEE--cCCEEEEEEEeCCCcEEEECCEEEEe
Confidence 45788999999999987 666666665543 122379999998
No 112
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=65.76 E-value=7.1 Score=36.27 Aligned_cols=44 Identities=9% Similarity=0.098 Sum_probs=33.3
Q ss_pred cCCCCeeEcceeEEEEEeecC-CCCeEEEccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~-~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|.+... ++.|.+.+++|..+ .||.||+|.
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~-~~d~vVlAt 322 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVL-KARSIIIAT 322 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEE-EEEEEEECC
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEE-EcCEEEECC
Confidence 346788999999999975111 33799988888654 799999984
No 113
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=64.83 E-value=5.7 Score=39.27 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=30.1
Q ss_pred CCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla 130 (282)
.|++|+.+++|.+|.. .+++ +.|.+++|. + .+|.||+|
T Consensus 164 ~Gv~i~~~t~V~~i~~--~~~~v~~V~t~~G~-i-~Ad~VV~A 202 (830)
T 1pj5_A 164 AGVTYRGSTTVTGIEQ--SGGRVTGVQTADGV-I-PADIVVSC 202 (830)
T ss_dssp TTCEEECSCCEEEEEE--ETTEEEEEEETTEE-E-ECSEEEEC
T ss_pred cCCEEECCceEEEEEE--eCCEEEEEEECCcE-E-ECCEEEEC
Confidence 5789999999999987 4455 467777773 3 79999999
No 114
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=64.68 E-value=4.2 Score=35.69 Aligned_cols=40 Identities=10% Similarity=-0.045 Sum_probs=29.6
Q ss_pred CCCeeEcceeEEEEEeecCCCCeE-EEcc---CCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWS-VSGL---DGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~-l~~~---~G~~~~~~d~VVla~ 131 (282)
.+++|+++++|.+|.. .++++. |.+. ++..+ .+|.||.|+
T Consensus 115 ~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~~~~~-~a~~vV~A~ 158 (397)
T 3cgv_A 115 AGADVWVKSPALGVIK--ENGKVAGAKIRHNNEIVDV-RAKMVIAAD 158 (397)
T ss_dssp HTCEEESSCCEEEEEE--ETTEEEEEEEEETTEEEEE-EEEEEEECC
T ss_pred CCCEEEECCEEEEEEE--eCCEEEEEEEEECCeEEEE-EcCEEEECC
Confidence 4788999999999987 566676 6552 33333 789999993
No 115
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=64.39 E-value=8.1 Score=32.79 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=33.1
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCe-EEEccC---CC-ccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLD---GQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w-~l~~~~---G~-~~~~~d~VVla 130 (282)
..+.+.|.+..+++++++++|.+|.. ++++. .+...+ |+ ....+|.||++
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~g~~~~i~~D~vi~a 266 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKG--DGKLLNALRIKNTKKNEETDLPVSGLFYA 266 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEE--SSSSEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEc--ccCcEEEEEEEECCCCceEEEEeCEEEEE
Confidence 45566666555788999999999986 44432 243332 32 22379999999
No 116
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=64.19 E-value=8.3 Score=35.61 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=30.6
Q ss_pred CCCeeEcceeEEEEEeec-CCCCeEEEc--c-CC--CccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLE-DKNLWSVSG--L-DG--QSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~-~~~~w~l~~--~-~G--~~~~~~d~VVla~ 131 (282)
.+++|+++++|.+|.... +++.|.+.+ . +| .. ..+|.||+|+
T Consensus 179 ~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~-i~ad~VV~A~ 226 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLAS-YEFDVLISAA 226 (497)
T ss_dssp TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHT-CCBSEEEECC
T ss_pred CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEE-EEcCEEEECC
Confidence 578999999999998510 135788876 3 55 23 3799999994
No 117
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=63.75 E-value=5.5 Score=36.25 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=30.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. +++.+.+.++++ .+ .+|.||+|.
T Consensus 228 ~~Gv~i~~~~~v~~i~~--~~~~~~v~~~~~-~i-~aD~Vv~a~ 267 (467)
T 1zk7_A 228 AEGIEVLEHTQASQVAH--MDGEFVLTTTHG-EL-RADKLLVAT 267 (467)
T ss_dssp HTTCEEETTCCEEEEEE--ETTEEEEEETTE-EE-EESEEEECS
T ss_pred hCCCEEEcCCEEEEEEE--eCCEEEEEECCc-EE-EcCEEEECC
Confidence 35789999999999986 555677776543 43 799999993
No 118
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=63.71 E-value=7.5 Score=35.18 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=30.4
Q ss_pred hcCCCCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEecC
Q 023469 86 CHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 86 a~~l~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla~ 131 (282)
.+..+++++++++|.+|+. .+++.. +.. +|+.+ .+|.||++.
T Consensus 201 l~~~Gv~i~~~~~v~~i~~--~~~~v~~v~~-~g~~i-~~D~vv~a~ 243 (452)
T 2cdu_A 201 YEAHGVNLVLGSKVAAFEE--VDDEIITKTL-DGKEI-KSDIAILCI 243 (452)
T ss_dssp HHHTTCEEEESSCEEEEEE--ETTEEEEEET-TSCEE-EESEEEECC
T ss_pred HHHCCCEEEcCCeeEEEEc--CCCeEEEEEe-CCCEE-ECCEEEECc
Confidence 3346889999999999985 344453 444 56554 799999993
No 119
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=63.43 E-value=5.8 Score=33.85 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=30.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..++++++++ |..|+. .++.|.+.+ +|..+ .||.||+|+
T Consensus 82 ~~gv~~~~~~-v~~i~~--~~~~~~v~~-~~~~~-~~~~vv~A~ 120 (333)
T 1vdc_A 82 RFGTTIFTET-VTKVDF--SSKPFKLFT-DSKAI-LADAVILAI 120 (333)
T ss_dssp HTTCEEECCC-CCEEEC--SSSSEEEEC-SSEEE-EEEEEEECC
T ss_pred HCCCEEEEeE-EEEEEE--cCCEEEEEE-CCcEE-EcCEEEECC
Confidence 3567899987 999986 667899987 66544 799999994
No 120
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=63.37 E-value=8.7 Score=35.49 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=30.6
Q ss_pred CCCeeEcceeEEEEEeecCCCC---eEEEccCCC-ccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQ-SLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~---w~l~~~~G~-~~~~~d~VVla~ 131 (282)
.+++|+++++|.+|.. .+++ +.+...+|+ ....+|.||.|+
T Consensus 124 ~Gv~i~~~~~V~~v~~--~~~~v~gv~~~~~dG~~~~i~ad~VI~Ad 168 (512)
T 3e1t_A 124 KGVDVRERHEVIDVLF--EGERAVGVRYRNTEGVELMAHARFIVDAS 168 (512)
T ss_dssp TTCEEESSCEEEEEEE--ETTEEEEEEEECSSSCEEEEEEEEEEECC
T ss_pred CCCEEEcCCEEEEEEE--ECCEEEEEEEEeCCCCEEEEEcCEEEECC
Confidence 5789999999999987 4443 566666774 123799999993
No 121
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=62.92 E-value=12 Score=34.36 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=30.0
Q ss_pred CCCeeEcceeEEEEEeecCCCC--eEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVla 130 (282)
.|++++.+ +|.+|.. ++++ +.|.+++|+.+ .+|.||.|
T Consensus 186 ~gv~~~~~-~v~~i~~--~~~~~~~~v~~~~g~~~-~ad~vV~A 225 (511)
T 2weu_A 186 RGVRHVVD-DVQHVGQ--DERGWISGVHTKQHGEI-SGDLFVDC 225 (511)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEE-ECSEEEEC
T ss_pred CCCEEEEC-eEeEEEE--cCCCCEEEEEECCCCEE-EcCEEEEC
Confidence 57889999 9999986 4445 67777778543 79999999
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=62.61 E-value=7.1 Score=35.47 Aligned_cols=41 Identities=22% Similarity=0.145 Sum_probs=30.5
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc-CC--CccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-DG--QSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~-~G--~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. .+++..+... +| +.+ .+|.||++.
T Consensus 224 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~~-~~D~vv~a~ 267 (464)
T 2a8x_A 224 KLGVTILTATKVESIAD--GGSQVTVTVTKDGVAQEL-KAEKVLQAI 267 (464)
T ss_dssp HHTCEEECSCEEEEEEE--CSSCEEEEEESSSCEEEE-EESEEEECS
T ss_pred HcCCEEEeCcEEEEEEE--cCCeEEEEEEcCCceEEE-EcCEEEECC
Confidence 35789999999999986 5556666654 55 333 799999994
No 123
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=62.33 E-value=8.1 Score=32.66 Aligned_cols=39 Identities=8% Similarity=0.193 Sum_probs=29.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..++++++++ |..++. .++.|.+ ..+|..+ .||.||+|.
T Consensus 74 ~~~~~~~~~~-v~~i~~--~~~~~~v-~~~~~~~-~~~~lv~At 112 (320)
T 1trb_A 74 KFETEIIFDH-INKVDL--QNRPFRL-NGDNGEY-TCDALIIAT 112 (320)
T ss_dssp HTTCEEECCC-EEEEEC--SSSSEEE-EESSCEE-EEEEEEECC
T ss_pred HCCCEEEEee-eeEEEe--cCCEEEE-EeCCCEE-EcCEEEECC
Confidence 4567889987 889986 6778988 5566554 799999993
No 124
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.31 E-value=7.8 Score=35.20 Aligned_cols=41 Identities=15% Similarity=0.060 Sum_probs=30.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc---CC--CccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DG--QSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G--~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. ++++..+... +| +. ..+|.||++.
T Consensus 230 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~ 275 (470)
T 1dxl_A 230 KQGMKFKLKTKVVGVDT--SGDGVKLTVEPSAGGEQTI-IEADVVLVSA 275 (470)
T ss_dssp HSSCCEECSEEEEEEEC--SSSSEEEEEEESSSCCCEE-EEESEEECCC
T ss_pred HcCCEEEeCCEEEEEEE--cCCeEEEEEEecCCCcceE-EECCEEEECC
Confidence 45788999999999986 5556766643 44 33 3799999994
No 125
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=62.22 E-value=10 Score=34.34 Aligned_cols=41 Identities=12% Similarity=-0.129 Sum_probs=28.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeE-EEc--c-CCC-ccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWS-VSG--L-DGQ-SLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~-l~~--~-~G~-~~~~~d~VVla~ 131 (282)
.+++|+++++|.++.. +++++. +.. . +|+ ....+|.||.|+
T Consensus 113 ~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 113 RGVEIWDLTTAMKPIF--EDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp TTCEEESSEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred cCCEEEeCcEEEEEEE--ECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 5789999999999986 445533 333 2 564 123799999994
No 126
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=61.52 E-value=7 Score=36.16 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHHhcCCCCeeEcceeEEEEEeecCC------CCeEEEccCCCc----cccccEEEecC
Q 023469 82 CKALCHQPGVESKFGVGVGRFEWLEDK------NLWSVSGLDGQS----LGQFNGVVASD 131 (282)
Q Consensus 82 ~~~La~~l~~~v~~~~~V~~i~~~~~~------~~w~l~~~~G~~----~~~~d~VVla~ 131 (282)
.+..|+.++..|+++++|.++++...+ +.|.|++.+++. .-.++.||++.
T Consensus 151 l~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlat 210 (501)
T 4b63_A 151 MRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAI 210 (501)
T ss_dssp HHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred HHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECc
Confidence 344466676679999999999873222 249998765421 12689999993
No 127
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.25 E-value=17 Score=30.80 Aligned_cols=50 Identities=14% Similarity=0.071 Sum_probs=33.5
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEcc---CCC-ccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G~-~~~~~d~VVla 130 (282)
..+.+.+.+..+++++++++|.+|.. +++...+... +|+ ....+|.||++
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 34556666556788999999999986 4332234433 564 12379999999
No 128
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=61.02 E-value=8.5 Score=34.57 Aligned_cols=40 Identities=25% Similarity=0.205 Sum_probs=29.1
Q ss_pred CCCeeEcceeEEEEEee--------------cCCCCeEEEccCCCccc--cccEEEec
Q 023469 89 PGVESKFGVGVGRFEWL--------------EDKNLWSVSGLDGQSLG--QFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~--------------~~~~~w~l~~~~G~~~~--~~d~VVla 130 (282)
.|++++.+++|.+|... ..++.|.+.+.+| . . .+|.||+|
T Consensus 194 ~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~-i~~~Ad~VV~A 249 (448)
T 3axb_A 194 AGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-T-RVEVGEKLVVA 249 (448)
T ss_dssp TTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-C-EEEEEEEEEEC
T ss_pred CCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-E-EeecCCEEEEC
Confidence 57899999999999741 1222367877777 3 3 68999999
No 129
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=60.77 E-value=11 Score=35.34 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=33.0
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCC-CC---eEEEccCCCc-cccccEEEecCCC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKN 133 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~-~~---w~l~~~~G~~-~~~~d~VVla~~~ 133 (282)
.|.+.+. ..+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|+-+
T Consensus 255 ~L~~~~~-~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 255 TLRKAAK-EQGIDTRLNSRVVKLVV--NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHH-HTTCCEECSEEEEEEEE--CTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEE--CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 3444433 35789999999999986 44 43 4444446642 2368999999544
No 130
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=60.51 E-value=11 Score=35.19 Aligned_cols=37 Identities=24% Similarity=0.168 Sum_probs=29.3
Q ss_pred CCeeEcceeEEEEEeecCCCC--eEEEccCCCccccccEEEec
Q 023469 90 GVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVla 130 (282)
|++++++ +|.+|.. .+++ +.|.+.+|+.+ .+|.||.|
T Consensus 209 Gv~i~~~-~V~~i~~--~~~g~~~~v~~~~G~~i-~ad~vI~A 247 (550)
T 2e4g_A 209 GVRHVED-RVEHVQR--DANGNIESVRTATGRVF-DADLFVDC 247 (550)
T ss_dssp CCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEE-ECSEEEEC
T ss_pred CcEEEEC-eEeEEEE--cCCCCEEEEEECCCCEE-ECCEEEEC
Confidence 7889999 9999986 4444 56777778644 79999999
No 131
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=60.22 E-value=10 Score=31.74 Aligned_cols=50 Identities=18% Similarity=0.035 Sum_probs=34.3
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCC---eEEEccCCC-ccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~---w~l~~~~G~-~~~~~d~VVla 130 (282)
..+.+.+.+..+++++++++|.+|.. .+++ ..+...+|+ ....+|.||++
T Consensus 186 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~~v~~~~~~g~~~~~~~D~vv~a 239 (315)
T 3r9u_A 186 PSTVEKVKKNEKIELITSASVDEVYG--DKMGVAGVKVKLKDGSIRDLNVPGIFTF 239 (315)
T ss_dssp HHHHHHHHHCTTEEEECSCEEEEEEE--ETTEEEEEEEECTTSCEEEECCSCEEEC
T ss_pred HHHHHHHHhcCCeEEEeCcEEEEEEc--CCCcEEEEEEEcCCCCeEEeecCeEEEE
Confidence 34556666667889999999999986 3322 344434675 12379999999
No 132
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=59.80 E-value=12 Score=34.24 Aligned_cols=48 Identities=10% Similarity=0.160 Sum_probs=34.2
Q ss_pred HHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc-cCCCc-cccccEEEecC
Q 023469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 82 ~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~~-~~~~d~VVla~ 131 (282)
.+.+.+..++++++++.|..|+. .++.+.+.. .+|+. ...||.||+|.
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDT--EKKIVYAEHTKTKDVFEFSYDRLLIAT 148 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHhhcCCEEEeCCEEEEEEC--CCCEEEEEEcCCCceEEEEcCEEEECC
Confidence 34454555788999999999986 666777765 45651 23799999994
No 133
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=59.77 E-value=15 Score=34.45 Aligned_cols=43 Identities=9% Similarity=0.029 Sum_probs=29.5
Q ss_pred CCCeeEcceeEEEEEeecCC-CC---eEEEccCCCc-cccccEEEecCCC
Q 023469 89 PGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKN 133 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~-~~---w~l~~~~G~~-~~~~d~VVla~~~ 133 (282)
.+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|+-+
T Consensus 268 ~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 268 RNIDLRMNTRGIEVLK--DDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp TTCEEESSEEEEEEEE--CTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred cCCEEEeCCEeeEeEE--cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 5789999999999986 44 33 3344335641 2368999999544
No 134
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=59.51 E-value=8.8 Score=35.75 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=35.9
Q ss_pred HHHhcCCCCeeEcceeEEEEEeec-----------------CCCCeEEEccCCCccccccEEEecCCCCCc
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLE-----------------DKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~-----------------~~~~w~l~~~~G~~~~~~d~VVla~~~~pa 136 (282)
....+..++++++++.|.+|+... .+++..+...+|+.+ .+|.||+|.-..|.
T Consensus 199 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i-~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 199 HQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELL-ETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEE-EESEEEECSCEEEC
T ss_pred HHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEE-EcCEEEECcCCccc
Confidence 333344678999999999998510 244566777777654 79999999433344
No 135
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.19 E-value=6.6 Score=35.58 Aligned_cols=41 Identities=15% Similarity=0.039 Sum_probs=29.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc---CCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+++. .+++..+... +|+.+ .+|.||++.
T Consensus 223 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~~-~~D~vv~a~ 266 (455)
T 1ebd_A 223 KKGVEVVTNALAKGAEE--REDGVTVTYEANGETKTI-DADYVLVTV 266 (455)
T ss_dssp HTTCEEEESEEEEEEEE--ETTEEEEEEEETTEEEEE-EESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCeEEEEEEeCCceeEE-EcCEEEECc
Confidence 45789999999999986 4455666543 33333 799999994
No 136
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=58.52 E-value=3.1 Score=36.91 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=31.4
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+++++++++|..++. +.+.-.+.+++|+.+ .||.||++
T Consensus 215 ~gi~v~~~~~v~~v~~--~~~~~~v~~~~g~~i-~~D~vi~~ 253 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKT--DTEAMTVETSFGETF-KAAVINLI 253 (401)
T ss_dssp CSEEEECTTTTCEEEE--ETTTTEEEETTSCEE-ECSEEEEC
T ss_pred cCcEEEeCceEEEEEe--cccceEEEcCCCcEE-EeeEEEEe
Confidence 4578999999999986 555666777888765 89999998
No 137
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=58.15 E-value=15 Score=33.74 Aligned_cols=51 Identities=12% Similarity=0.195 Sum_probs=36.5
Q ss_pred CCchHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 76 ~Gm~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
+|...+-+.|. ..|+++++++.|.+|.. +++...+.+.+|+.+ .+|.||++
T Consensus 258 gG~~gle~~l~-~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i-~aD~Vv~a 308 (493)
T 1y56_A 258 SKADEVIQELE-RWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEY-KVDALIFA 308 (493)
T ss_dssp TTHHHHHHHHH-HHTCEEEECSSEEEEEC--SSSCCEEEETTCCEE-ECSEEEEC
T ss_pred CCHHHHHHHHH-hCCcEEEeCCeeEEEec--CCceEEEEeCCCeEE-EeCEEEEC
Confidence 34444444444 46789999999999985 444556666777654 79999999
No 138
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=57.49 E-value=17 Score=33.41 Aligned_cols=39 Identities=18% Similarity=0.020 Sum_probs=29.5
Q ss_pred CeeEcceeEEEEEeecCCCCeEEEcc--CCC-ccccccEEEecC
Q 023469 91 VESKFGVGVGRFEWLEDKNLWSVSGL--DGQ-SLGQFNGVVASD 131 (282)
Q Consensus 91 ~~v~~~~~V~~i~~~~~~~~w~l~~~--~G~-~~~~~d~VVla~ 131 (282)
++++++++|.+++. .+++..+... +|+ ....+|.||+|.
T Consensus 229 V~i~~~~~v~~i~~--~~~~v~v~~~~~~G~~~~i~~D~Vi~a~ 270 (492)
T 3ic9_A 229 FYFDAKARVISTIE--KEDAVEVIYFDKSGQKTTESFQYVLAAT 270 (492)
T ss_dssp SEEETTCEEEEEEE--CSSSEEEEEECTTCCEEEEEESEEEECS
T ss_pred cEEEECCEEEEEEE--cCCEEEEEEEeCCCceEEEECCEEEEee
Confidence 78999999999986 5667777654 562 223799999994
No 139
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=57.34 E-value=9 Score=35.09 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=30.5
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccC---CC-ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVla~ 131 (282)
..+++++++++|.+++. .+++..+...+ |+ ....+|.||++.
T Consensus 251 ~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 251 KQGIDFKLGAKVTGAVK--SGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp HTTCEEECSEEEEEEEE--ETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred hCCCEEEECCeEEEEEE--eCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 45789999999999986 55666665542 42 223799999994
No 140
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=56.52 E-value=9.3 Score=33.02 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=30.4
Q ss_pred CC-CeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 89 PG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+ ++++++++|.+|+. .++.+.+.+.+|+.+..+|.||++
T Consensus 227 ~g~v~~~~~~~v~~i~~--~~~~~~v~~~~g~~~~~~d~vi~a 267 (369)
T 3d1c_A 227 GARIEMNVHYTVKDIDF--NNGQYHISFDSGQSVHTPHEPILA 267 (369)
T ss_dssp TCCEEEECSCCEEEEEE--ETTEEEEEESSSCCEEESSCCEEC
T ss_pred CCcEEEecCcEEEEEEe--cCCceEEEecCCeEeccCCceEEe
Confidence 44 88999999999975 455677777788654346999998
No 141
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=56.51 E-value=6.3 Score=35.05 Aligned_cols=38 Identities=8% Similarity=0.100 Sum_probs=29.0
Q ss_pred hcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 86 a~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.++.+++++++++|.+|+. + + +.+++|+.+ .+|.||++
T Consensus 228 l~~~gV~~~~~~~v~~i~~--~--~--v~~~~g~~~-~~D~vi~a 265 (409)
T 3h8l_A 228 YNQLGIKLVHNFKIKEIRE--H--E--IVDEKGNTI-PADITILL 265 (409)
T ss_dssp HHHHTCEEECSCCEEEECS--S--E--EEETTSCEE-ECSEEEEE
T ss_pred HHHCCCEEEcCCceEEECC--C--e--EEECCCCEE-eeeEEEEC
Confidence 3345789999999999974 2 2 556677664 79999999
No 142
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=56.31 E-value=13 Score=33.97 Aligned_cols=43 Identities=14% Similarity=-0.037 Sum_probs=29.3
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCC----ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ----SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~----~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. ..++...+...+|. ....+|.||++.
T Consensus 239 ~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~ 285 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEK-QDDGKLLVKYKNVETGEESEDVYDTVLWAI 285 (483)
T ss_dssp HTTCCEEETEEEEEEEE-CTTSCEEEEEEETTTCCEEEEEESEEEECS
T ss_pred hCCCEEEeCCEEEEEEE-cCCCcEEEEEecCCCCceeEEEcCEEEECc
Confidence 45788999999999986 22334566554442 123799999993
No 143
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=55.40 E-value=10 Score=34.22 Aligned_cols=43 Identities=30% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
..|++++++++|.+|+....+++ ..+.+.+|+.+ .+|.||++.
T Consensus 203 ~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i-~~D~Vv~a~ 246 (431)
T 1q1r_A 203 EAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRL-PADLVIAGI 246 (431)
T ss_dssp HHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEE-ECSEEEECC
T ss_pred hCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 45789999999999974001233 36777788654 799999993
No 144
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=55.38 E-value=19 Score=33.36 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.5
Q ss_pred CCCeeEcceeEEEEEeecCCCC--eEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVla 130 (282)
.+++++.+ +|.+|.. .+++ +.|.+.+|+.+ .+|.||.|
T Consensus 178 ~gv~~~~~-~v~~i~~--~~~g~~~~v~~~~g~~i-~ad~vV~A 217 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRL--NNRGYISNLLTKEGRTL-EADLFIDC 217 (538)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEE-CCSEEEEC
T ss_pred CCCEEEEe-eEeEEEE--cCCCcEEEEEECCCcEE-EeCEEEEC
Confidence 57889999 8999986 4444 57777777543 79999999
No 145
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=55.30 E-value=12 Score=35.49 Aligned_cols=42 Identities=12% Similarity=0.088 Sum_probs=31.8
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc-CCC-ccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-DGQ-SLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~-~G~-~~~~~d~VVla 130 (282)
..|++++++++|.+|.. .+++.|.|.+. +|+ ....+|.||.|
T Consensus 140 ~~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~~G~~~~i~AdlVV~A 183 (591)
T 3i3l_A 140 SRGITVHEETPVTDVDL-SDPDRVVLTVRRGGESVTVESDFVIDA 183 (591)
T ss_dssp HTTCEEETTCCEEEEEC-CSTTCEEEEEEETTEEEEEEESEEEEC
T ss_pred hCCCEEEeCCEEEEEEE-cCCCEEEEEEecCCceEEEEcCEEEEC
Confidence 35789999999999986 23567888876 562 12379999999
No 146
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=55.26 E-value=17 Score=34.13 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=29.7
Q ss_pred CCCeeEcceeEEEEEeecCC-CC---eEEEccCCCc-cccccEEEecCCCCC
Q 023469 89 PGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKNVV 135 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~-~~---w~l~~~~G~~-~~~~d~VVla~~~~p 135 (282)
.+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|.-+.+
T Consensus 268 ~gv~i~~~t~v~~l~~--~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 268 RGTDIRLNSRVVRILE--DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp TTCEEESSEEEEEEEE--C--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred cCCeEEecCEEEEEEE--CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 5789999999999976 44 33 3343335642 236899999954433
No 147
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=54.22 E-value=14 Score=31.42 Aligned_cols=40 Identities=10% Similarity=-0.003 Sum_probs=29.6
Q ss_pred CCCCeeEcceeEEEEEeecC--CCC-eEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLED--KNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~--~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++. +.|.+|.. . ++. |.+...+|+.+ .||.||+|+
T Consensus 77 ~~gv~~~~-~~v~~i~~--~~~~~~~~~v~~~~g~~~-~~~~vv~At 119 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQH--DATSHPYPFTVRGYNGEY-RAKAVILAT 119 (325)
T ss_dssp HTTCEEEE-CCEEEEEE--CTTSSSCCEEEEESSCEE-EEEEEEECC
T ss_pred HcCCEEEe-eeEEEEEe--ccCCCceEEEEECCCCEE-EeCEEEECc
Confidence 35677777 58999986 4 344 88877777654 799999994
No 148
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=53.59 E-value=21 Score=33.03 Aligned_cols=39 Identities=8% Similarity=-0.077 Sum_probs=29.1
Q ss_pred CCCeeEcceeEEEEEeecCCCCe--EEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w--~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++ +|.+|.. .++++ .|.+.+|+.+ .+|.||.|+
T Consensus 189 ~Gv~i~~~-~v~~i~~--~~~g~~~~v~~~~g~~i-~ad~vV~Ad 229 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIIN--NQHGDIEKLITKQNGEI-SGQLFIDCT 229 (526)
T ss_dssp SCCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEE-ECSEEEECS
T ss_pred CCCEEEEe-EEEEEEe--cCCCcEEEEEECCCCEE-EcCEEEECC
Confidence 57889999 5999986 44444 5666676553 799999993
No 149
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=53.34 E-value=15 Score=32.82 Aligned_cols=42 Identities=24% Similarity=0.162 Sum_probs=30.9
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+...+..+++++++++|.+|+ ++ .+.+.+|+.+ .+|.||++.
T Consensus 194 ~~~l~~~GV~i~~~~~v~~i~---~~---~v~~~~g~~i-~~D~vi~a~ 235 (408)
T 2gqw_A 194 ARYHAAQGVDLRFERSVTGSV---DG---VVLLDDGTRI-AADMVVVGI 235 (408)
T ss_dssp HHHHHHTTCEEEESCCEEEEE---TT---EEEETTSCEE-ECSEEEECS
T ss_pred HHHHHHcCcEEEeCCEEEEEE---CC---EEEECCCCEE-EcCEEEECc
Confidence 333344688999999999997 22 5666778654 799999993
No 150
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=53.13 E-value=22 Score=29.73 Aligned_cols=50 Identities=12% Similarity=-0.134 Sum_probs=33.2
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCC-eEEEcc---CCCc-cccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS-LGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~---~G~~-~~~~d~VVla 130 (282)
..+.+.|.+..+++++++++|.+|.. ++++ ..+... +|+. ...+|.||++
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKG--DASGVSSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEE--ETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEEC--CCCcEeEEEEEecCCCceEEEecCEEEEE
Confidence 34566666556788999999999986 3232 234333 5641 2379999999
No 151
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=52.99 E-value=12 Score=33.48 Aligned_cols=40 Identities=28% Similarity=0.412 Sum_probs=30.8
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+..+++++++++|..|.+ . .+.+..++|+.+ .||.||+|.
T Consensus 70 ~~~~v~~~~~~~v~~i~~--~--~~~v~~~~g~~~-~~d~lviAt 109 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDP--Q--AHTVALSDGRTL-PYGTLVLAT 109 (408)
T ss_dssp TSCSCEEEETCCEEEEET--T--TTEEEETTSCEE-ECSEEEECC
T ss_pred HHCCCEEEcCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEECC
Confidence 345678999999999985 3 467777777654 799999994
No 152
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=52.75 E-value=16 Score=30.66 Aligned_cols=49 Identities=20% Similarity=0.095 Sum_probs=30.9
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCe-EEEcc---------CC---C-ccccccEEEec
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGL---------DG---Q-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w-~l~~~---------~G---~-~~~~~d~VVla 130 (282)
.|.+.+.+..+++++++++|.+|.. ++++. .+... +| + ....+|.||+|
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~--~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIV--KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEE--ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEe--cCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 4555555545788999999999986 44432 23221 22 1 22378999999
No 153
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=52.03 E-value=12 Score=35.13 Aligned_cols=40 Identities=23% Similarity=0.220 Sum_probs=30.0
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|+. .+++ +...+|+.+ .+|.||+|.
T Consensus 239 ~~~GV~i~~~~~v~~i~~--~~~~--v~~~~g~~i-~~D~Vi~a~ 278 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEE--NGAV--VRLKSGSVI-QTDMLILAI 278 (588)
T ss_dssp HHTTCEEECSCCEEEEEG--GGTE--EEETTSCEE-ECSEEEECS
T ss_pred HHcCCEEEECCeEEEEec--CCCE--EEECCCCEE-EcCEEEEcc
Confidence 346789999999999985 4343 555677654 799999993
No 154
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=51.19 E-value=21 Score=32.60 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=30.0
Q ss_pred HHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 84 ~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
...+..+++++++++|.+|+. +++...+.. +|+.+ .+|.||++.
T Consensus 244 ~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i-~~D~Vi~a~ 287 (490)
T 2bc0_A 244 KNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEY-DVDMVILAV 287 (490)
T ss_dssp HHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEE-ECSEEEECC
T ss_pred HHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEE-ECCEEEECC
Confidence 333456889999999999984 332223444 55544 799999994
No 155
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=50.84 E-value=13 Score=34.50 Aligned_cols=51 Identities=12% Similarity=0.166 Sum_probs=32.7
Q ss_pred chHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCc---cccccEEEec
Q 023469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVAS 130 (282)
Q Consensus 78 m~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~---~~~~d~VVla 130 (282)
++..++...++.|++|+++++|.+++. ++........+|+. ...+|.||.|
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa 327 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWA 327 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEEC
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEc
Confidence 444444444567899999999999974 22223333456641 2378999998
No 156
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=50.72 E-value=18 Score=33.72 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=28.9
Q ss_pred eEcceeEEEEEeecCCCCeEEEccC---CC-ccccccEEEecC
Q 023469 93 SKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (282)
Q Consensus 93 v~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVla~ 131 (282)
|+++++|.+|+. ++++|.+...+ |+ ....+|.||.|+
T Consensus 152 v~~~~~v~~~~~--~~~~v~v~~~~~~~G~~~~i~a~~vVgAD 192 (549)
T 2r0c_A 152 LRTRSRLDSFEQ--RDDHVRATITDLRTGATRAVHARYLVACD 192 (549)
T ss_dssp EECSEEEEEEEE--CSSCEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred cccCcEEEEEEE--eCCEEEEEEEECCCCCEEEEEeCEEEECC
Confidence 999999999997 67788887654 63 223789999994
No 157
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=50.40 E-value=19 Score=32.44 Aligned_cols=45 Identities=20% Similarity=0.162 Sum_probs=31.1
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+...+..+++++++++|.+|+. .++.+.+.. +|+.+ .+|.||+|.
T Consensus 198 ~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~-~~~~i-~~d~vi~a~ 242 (447)
T 1nhp_A 198 TEEMEANNITIATGETVERYEG--DGRVQKVVT-DKNAY-DADLVVVAV 242 (447)
T ss_dssp HHHHHTTTEEEEESCCEEEEEC--SSBCCEEEE-SSCEE-ECSEEEECS
T ss_pred HHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEE-CCCEE-ECCEEEECc
Confidence 3333456789999999999985 433345655 34443 799999994
No 158
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=50.04 E-value=30 Score=28.94 Aligned_cols=41 Identities=10% Similarity=-0.049 Sum_probs=27.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCC-eEEEccC----CC-ccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSGLD----GQ-SLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~----G~-~~~~~d~VVla 130 (282)
..+++++++++|.+|.. ++++ ..+...+ |+ ....+|.||++
T Consensus 196 ~~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a 242 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTG--DQMGVTGVRLRDTQNSDNIESLDVAGLFVA 242 (320)
T ss_dssp TSSEEEECSCEEEEEEE--CSSSEEEEEEECCTTCCCCEEEECSEEEEC
T ss_pred cCCeEEEcCceeEEEEc--CCCceEEEEEEeccCCCceEEEEcCEEEEE
Confidence 36788999999999986 4433 2244332 42 22379999999
No 159
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=49.92 E-value=19 Score=30.74 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=29.8
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEE-EccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSV-SGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l-~~~~G~~~~~~d~VVla~ 131 (282)
..++++++++ |.+|+. ++.|.+ .+++|+.+ .||.||+|.
T Consensus 83 ~~~v~~~~~~-v~~i~~---~~~~~v~~~~~g~~~-~~d~lviAt 122 (335)
T 2a87_A 83 RFGADLRMED-VESVSL---HGPLKSVVTADGQTH-RARAVILAM 122 (335)
T ss_dssp HTTCEEECCC-EEEEEC---SSSSEEEEETTSCEE-EEEEEEECC
T ss_pred HcCCEEEEee-EEEEEe---CCcEEEEEeCCCCEE-EeCEEEECC
Confidence 4577899987 888874 456888 77777554 799999994
No 160
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=49.59 E-value=10 Score=33.72 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=32.2
Q ss_pred HHHHHhcCCC-CeeEcceeEEEEEeecCCCCeEEEccC---CC-ccccccEEEecC
Q 023469 81 ICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (282)
Q Consensus 81 l~~~La~~l~-~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVla~ 131 (282)
|.+.+.+..+ ++|+++++|.+|+. +++|.+.+.+ |+ ....+|.||.|+
T Consensus 113 L~~~~~~~~g~~~v~~~~~v~~i~~---~~~v~v~~~~~~~g~~~~~~ad~vV~Ad 165 (410)
T 3c96_A 113 LLAAVRERLGQQAVRTGLGVERIEE---RDGRVLIGARDGHGKPQALGADVLVGAD 165 (410)
T ss_dssp HHHHHHHHHCTTSEEESEEEEEEEE---ETTEEEEEEEETTSCEEEEEESEEEECC
T ss_pred HHHHHHhhCCCcEEEECCEEEEEec---CCccEEEEecCCCCCceEEecCEEEECC
Confidence 3444433224 47999999999985 4568887654 63 223799999993
No 161
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=49.56 E-value=16 Score=34.25 Aligned_cols=40 Identities=20% Similarity=0.102 Sum_probs=32.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..++++++++.|.+++. .++...+...+++.. .+|.|++|
T Consensus 275 ~~gi~~~~~~~v~~~~~--~~~~~~v~~~~~~~~-~~D~vLvA 314 (542)
T 4b1b_A 275 EQGVMFKNGILPKKLTK--MDDKILVEFSDKTSE-LYDTVLYA 314 (542)
T ss_dssp HTTCEEEETCCEEEEEE--ETTEEEEEETTSCEE-EESEEEEC
T ss_pred hhcceeecceEEEEEEe--cCCeEEEEEcCCCeE-EEEEEEEc
Confidence 35688999999999997 667777877777554 68999998
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=49.49 E-value=18 Score=33.86 Aligned_cols=47 Identities=4% Similarity=0.122 Sum_probs=33.7
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc-cCCCc-cccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~~-~~~~d~VVla~ 131 (282)
+.+++..++++++++.|.+|.+ .++.+.+.. .+|+. ...||+||+|.
T Consensus 100 ~~~~~~~gi~v~~~~~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 100 ERMSKRFNLDIRVLSEVVKINK--EEKTITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp HHHHHHTTCEEECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECC
Confidence 4444456778999999999997 667777764 34541 23799999993
No 163
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.37 E-value=10 Score=34.48 Aligned_cols=51 Identities=24% Similarity=0.149 Sum_probs=35.2
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCC-CCeEEEcc--CCCc-cccccEEEecC
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDK-NLWSVSGL--DGQS-LGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~-~~w~l~~~--~G~~-~~~~d~VVla~ 131 (282)
..+.+.+.+.+.++++++++|.+|+. .+ ++..+... +|+. ...+|.||++.
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~--~~~~~v~v~~~~~~G~~~~i~~D~vi~a~ 268 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKK--IKDDEYEVIYSTKDGSKKSIFTNSVVLAA 268 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEE--EETTEEEEEECCTTSCCEEEEESCEEECC
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEE--cCCCcEEEEEEecCCceEEEEcCEEEECc
Confidence 34555555544478999999999986 44 56667665 5651 23789999983
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.28 E-value=17 Score=33.19 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=28.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. +++.+.+..+++ .+ .+|.||++.
T Consensus 239 ~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~-~i-~~D~vi~a~ 278 (480)
T 3cgb_A 239 KHHIEILTNENVKAFKG--NERVEAVETDKG-TY-KADLVLVSV 278 (480)
T ss_dssp HTTCEEECSCCEEEEEE--SSBEEEEEETTE-EE-ECSEEEECS
T ss_pred HcCcEEEcCCEEEEEEc--CCcEEEEEECCC-EE-EcCEEEECc
Confidence 46789999999999986 433345555443 33 799999994
No 165
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=48.51 E-value=12 Score=33.29 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=29.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|..|.+ . .+.+.+.+|+.+ .||+||+|.
T Consensus 70 ~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlAt 107 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDV--Q--TRTISLDDGTTL-SADAIVIAT 107 (410)
T ss_dssp TTCEEEESCCEEEEET--T--TTEEEETTSCEE-ECSEEEECC
T ss_pred CCCEEEeCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEEcc
Confidence 4678999999999985 3 346666777654 799999993
No 166
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=48.47 E-value=20 Score=32.93 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=33.3
Q ss_pred HHHHHHhc---CCCCeeEcceeEEEEEeecC-CCC-eEEEcc-CCCc-ccccc-EEEecCCCCC
Q 023469 80 SICKALCH---QPGVESKFGVGVGRFEWLED-KNL-WSVSGL-DGQS-LGQFN-GVVASDKNVV 135 (282)
Q Consensus 80 ~l~~~La~---~l~~~v~~~~~V~~i~~~~~-~~~-w~l~~~-~G~~-~~~~d-~VVla~~~~p 135 (282)
.+.+.|.+ +.+++|+++++|.+|.. + +++ ..+... +|+. ...+| .||+|.-+..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 55555543 35789999999999987 4 333 223322 3322 23685 9999955443
No 167
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=48.05 E-value=12 Score=34.73 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=32.6
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc-cCCC-ccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVla~ 131 (282)
+.+++..+++++++++|.+|++ .++.+.+.. .+|+ ....||+||+|.
T Consensus 65 ~~~~~~~~i~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAt 113 (565)
T 3ntd_A 65 ESFKARFNVEVRVKHEVVAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSP 113 (565)
T ss_dssp HHHHHHHCCEEETTEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHhcCcEEEECCEEEEEEC--CCCEEEEEecCCCCeEEEECCEEEECC
Confidence 3344435678999999999997 667777764 2343 123799999993
No 168
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=47.94 E-value=18 Score=32.76 Aligned_cols=47 Identities=9% Similarity=0.078 Sum_probs=29.1
Q ss_pred HHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc-cCCC-ccccccEEEecC
Q 023469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVASD 131 (282)
Q Consensus 83 ~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVla~ 131 (282)
+.+.+..+++++++++|.+|++ .++.+.+.. .+|+ ....||.||+|.
T Consensus 73 ~~~~~~~gi~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 73 EFFRINKDVEALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLAL 121 (472)
T ss_dssp --------CEEECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHhhhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEeC
Confidence 3444445678899999999987 666777764 3354 123799999993
No 169
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=47.72 E-value=20 Score=30.33 Aligned_cols=41 Identities=12% Similarity=0.016 Sum_probs=28.2
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc---CCC-ccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~---~G~-~~~~~d~VVla 130 (282)
..++++++++.|.+|.. +++...+... +|+ ....+|.||++
T Consensus 203 ~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLIL 247 (335)
T ss_dssp TTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred cCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEe
Confidence 35789999999999986 4332234433 563 22379999999
No 170
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.55 E-value=15 Score=33.46 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=29.8
Q ss_pred cCCCCeeEcceeEEEEEeecCCCCeEEEcc-----CCCccccccEEEecC
Q 023469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL-----DGQSLGQFNGVVASD 131 (282)
Q Consensus 87 ~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~-----~G~~~~~~d~VVla~ 131 (282)
+..+++++++++|.+|.....++.+.+... +|+.+ .+|.||+|.
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~-~~D~vv~a~ 283 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENL-EAEVLLVAV 283 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEE-EESEEEECS
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEE-ECCEEEECC
Confidence 345789999999999974102344666554 23333 799999993
No 171
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=47.09 E-value=29 Score=31.46 Aligned_cols=42 Identities=12% Similarity=-0.119 Sum_probs=29.3
Q ss_pred CCCCeeEcceeEEEEEeecCCCC--eEEEccC---CC---ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL--WSVSGLD---GQ---SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~--w~l~~~~---G~---~~~~~d~VVla~ 131 (282)
..+++++++++|.+++. .+++ ..+...+ |+ ....+|.||++.
T Consensus 240 ~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 240 NAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp HTTCEEETTEEEEEEEE--CSSSEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 45789999999999986 4444 5555544 21 223799999993
No 172
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.32 E-value=10 Score=33.32 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=28.2
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|..|++ . .+.|. .+|+.+ .||+||+|.
T Consensus 73 ~~v~~~~g~~v~~id~--~--~~~V~-~~g~~~-~~d~lViAT 109 (367)
T 1xhc_A 73 RGIEIRLAEEAKLIDR--G--RKVVI-TEKGEV-PYDTLVLAT 109 (367)
T ss_dssp HTEEEECSCCEEEEET--T--TTEEE-ESSCEE-ECSEEEECC
T ss_pred CCcEEEECCEEEEEEC--C--CCEEE-ECCcEE-ECCEEEECC
Confidence 4678899999999985 3 46676 566554 799999993
No 173
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=45.40 E-value=17 Score=32.66 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=29.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|..|.+ .+ ..|.+++|+.+ .||.||+|.
T Consensus 72 ~~gv~~~~~~~v~~i~~--~~--~~v~~~~g~~~-~~d~lviAt 110 (431)
T 1q1r_A 72 AQNIQLLGGTQVTAINR--DR--QQVILSDGRAL-DYDRLVLAT 110 (431)
T ss_dssp HTTEEEECSCCEEEEET--TT--TEEEETTSCEE-ECSEEEECC
T ss_pred hCCCEEEeCCEEEEEEC--CC--CEEEECCCCEE-ECCEEEEcC
Confidence 35778999999999985 43 35666677654 799999994
No 174
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=44.41 E-value=23 Score=29.85 Aligned_cols=39 Identities=8% Similarity=0.040 Sum_probs=28.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..++++++ ++|.++.. .++.|.+.+ +|..+ .||.||+|.
T Consensus 84 ~~~v~~~~-~~v~~i~~--~~~~~~v~~-~~~~~-~~~~li~At 122 (319)
T 3cty_A 84 NYAKIREG-VEVRSIKK--TQGGFDIET-NDDTY-HAKYVIITT 122 (319)
T ss_dssp TTSEEEET-CCEEEEEE--ETTEEEEEE-SSSEE-EEEEEEECC
T ss_pred HcCCEEEE-eeEEEEEE--eCCEEEEEE-CCCEE-EeCEEEECC
Confidence 45677777 68999986 566788876 44443 799999994
No 175
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=44.39 E-value=13 Score=34.01 Aligned_cols=41 Identities=7% Similarity=0.128 Sum_probs=29.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEE-ccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVS-GLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~-~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|..|.+ .++.+.+. ..++..+ .||.||+|.
T Consensus 104 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~g~~~~~-~~d~lviAt 145 (490)
T 2bc0_A 104 SLGAKVYMESPVQSIDY--DAKTVTALVDGKNHVE-TYDKLIFAT 145 (490)
T ss_dssp HTTCEEETTCCEEEEET--TTTEEEEEETTEEEEE-ECSEEEECC
T ss_pred hCCCEEEeCCEEEEEEC--CCCEEEEEeCCcEEEE-ECCEEEECC
Confidence 35678999999999986 66677775 3222233 799999994
No 176
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=44.14 E-value=43 Score=27.81 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=31.4
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCCCe-EEEcc---CCC-ccccccEEEec
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGL---DGQ-SLGQFNGVVAS 130 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w-~l~~~---~G~-~~~~~d~VVla 130 (282)
+.+.|.+..+++++++++|.+|.. ++++. .+... +|+ ....+|.||++
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKG--DGSKVVGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEE--SSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHhhCCCeEEecCCceEEEEc--CCCcEEEEEEEECCCCcEEEEEcCEEEEe
Confidence 455565445788999999999986 44432 33332 353 12378999999
No 177
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=43.96 E-value=21 Score=33.48 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=28.7
Q ss_pred CCCCeeEcceeEEEEEeecCCCC-eEEEcc---CCCc-cccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS-LGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~---~G~~-~~~~d~VVla 130 (282)
..|++|+.+++|.+|.+ ++++ |.+... +|+. ...+|.||+|
T Consensus 200 ~~Ga~i~~~t~V~~l~~--~~~~v~gV~~~d~~tg~~~~i~A~~VV~A 245 (571)
T 2rgh_A 200 EDGAYLVSKMKAVGFLY--EGDQIVGVKARDLLTDEVIEIKAKLVINT 245 (571)
T ss_dssp HTTCEEESSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEBSCEEEC
T ss_pred HcCCeEEeccEEEEEEE--eCCEEEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 35789999999999987 4433 666532 3431 2378999999
No 178
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=43.86 E-value=17 Score=34.09 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=32.3
Q ss_pred HHHHHHhc---CCCCeeEcceeEEEEEeecCCCC-eEEEcc---CCC-ccccccEEEec
Q 023469 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQ-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~---~G~-~~~~~d~VVla 130 (282)
.++..|++ ..|++|+++++|.+|.. .+++ |.+... +|+ ....+|.||+|
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~--~~g~v~gV~~~d~~tg~~~~i~A~~VV~A 227 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIY--DQGKVVGVVAKDRLTDTTHTIYAKKVVNA 227 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCeEEEEEEEEcCCCceEEEECCEEEEC
Confidence 34444443 35789999999999997 4444 556543 242 12378999999
No 179
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=43.43 E-value=12 Score=34.42 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=29.5
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+++++++++|.+|.. . .+.|.+++|+.+ .||+||+|.
T Consensus 103 ~gv~~~~g~~v~~id~--~--~~~V~~~~g~~i-~yd~lviAT 140 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDV--R--DNMVKLNDGSQI-TYEKCLIAT 140 (493)
T ss_dssp CEEEEEETCCEEEEEG--G--GTEEEETTSCEE-EEEEEEECC
T ss_pred CCeEEEcCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEECC
Confidence 4678899999999986 3 356777778654 799999994
No 180
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=43.37 E-value=41 Score=28.12 Aligned_cols=50 Identities=4% Similarity=-0.004 Sum_probs=32.0
Q ss_pred chHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC---CC-ccccccEEEec
Q 023469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVAS 130 (282)
Q Consensus 78 m~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVla 130 (282)
.....+.|. ..+++++++++|.+|.. .++...+...+ |+ ....+|.||++
T Consensus 192 ~~~~~~~l~-~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 192 HEHSVENLH-ASKVNVLTPFVPAELIG--EDKIEQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp CHHHHHHHH-HSSCEEETTEEEEEEEC--SSSCCEEEEEETTSCCEEEEECSEEEEC
T ss_pred cHHHHHHHh-cCCeEEEeCceeeEEec--CCceEEEEEEecCCCceEEEECCEEEEe
Confidence 344445554 35788999999999986 44444444433 21 22379999999
No 181
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=42.77 E-value=12 Score=33.87 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=31.1
Q ss_pred HhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 85 La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+++..+++++++++|.+++. +.+.+..++|.....||+||+|.
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~----~~~~v~~~~g~~~~~~d~lviAt 110 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDT----GYVRVRENGGEKSYEWDYLVFAN 110 (449)
T ss_dssp HHHHTTCEEETTCEEEEECS----SEEEEECSSSEEEEECSEEEECC
T ss_pred HHHhcCcEEEecCEEEEEec----CCCEEEECCceEEEEcCEEEECC
Confidence 33345688999999999974 34778776663223799999993
No 182
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=42.49 E-value=16 Score=32.53 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=29.9
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++++++|..|.+ . .+.+..++|+.+ .||+||+|.
T Consensus 77 ~~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlAt 115 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDP--A--AHTVKLGDGSAI-EYGKLIWAT 115 (415)
T ss_dssp HTTEEEEETCCEEEEET--T--TTEEEETTSCEE-EEEEEEECC
T ss_pred HCCcEEEeCCEEEEEEC--C--CCEEEECCCCEE-EeeEEEEcc
Confidence 35678999999999985 3 356666777654 799999993
No 183
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.37 E-value=25 Score=31.82 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=28.1
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCC-ccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVla~ 131 (282)
..+++++++++|.+|+. ++..+...+|+ ....+|.||+|.
T Consensus 224 ~~gv~i~~~~~v~~i~~----~~v~v~~~~G~~~~i~~D~vv~a~ 264 (458)
T 1lvl_A 224 KLGIALHLGHSVEGYEN----GCLLANDGKGGQLRLEADRVLVAV 264 (458)
T ss_dssp HHTCEEETTCEEEEEET----TEEEEECSSSCCCEECCSCEEECC
T ss_pred HCCCEEEECCEEEEEEe----CCEEEEECCCceEEEECCEEEECc
Confidence 34788999999999973 23666644562 223799999994
No 184
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=39.75 E-value=32 Score=31.33 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=29.3
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccC---CCc-cccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQS-LGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~---G~~-~~~~d~VVla~ 131 (282)
..++++++++.|.+|+. ..++...+...+ |+. ...+|.||++.
T Consensus 237 ~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~ 283 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKK-LPTNQLQVTWEDHASGKEDTGTFDTVLWAI 283 (488)
T ss_dssp HTTCEEEETEEEEEEEE-CTTSCEEEEEEETTTTEEEEEEESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE-cCCCcEEEEEEeCCCCeeEEEECCEEEEcc
Confidence 45789999999999986 233446665433 442 12689999983
No 185
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=38.90 E-value=36 Score=32.63 Aligned_cols=48 Identities=17% Similarity=-0.019 Sum_probs=32.1
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
.|.+.+.+..+++| +++.|..|.. ++++ +.|.+.+|..+ .+|.||+|+
T Consensus 128 ~L~~~Le~~~GVeI-~~~~Vt~L~~--e~g~V~GV~t~dG~~i-~AdaVVLAT 176 (637)
T 2zxi_A 128 YMKKVCENQENLYI-KQEEVVDIIV--KNNQVVGVRTNLGVEY-KTKAVVVTT 176 (637)
T ss_dssp HHHHHHHTCTTEEE-EESCEEEEEE--SSSBEEEEEETTSCEE-ECSEEEECC
T ss_pred HHHHHHHhCCCCEE-EEeEEEEEEe--cCCEEEEEEECCCcEE-EeCEEEEcc
Confidence 33444443246777 5789999986 4444 45777778654 789999994
No 186
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=38.38 E-value=24 Score=31.66 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=25.4
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+++++.+ +|++|++ +++ +|.+++|+.+ .||.+|+|
T Consensus 69 ~gv~~i~~-~v~~Id~--~~~--~V~~~~g~~i-~YD~LViA 104 (430)
T 3hyw_A 69 FNIEFINE-KAESIDP--DAN--TVTTQSGKKI-EYDYLVIA 104 (430)
T ss_dssp GTEEEECS-CEEEEET--TTT--EEEETTCCEE-ECSEEEEC
T ss_pred CCcEEEEe-EEEEEEC--CCC--EEEECCCCEE-ECCEEEEe
Confidence 34566655 6888986 444 3556778765 79999999
No 187
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=37.82 E-value=20 Score=32.07 Aligned_cols=45 Identities=11% Similarity=0.041 Sum_probs=29.7
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC--CCccccccEEEec
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD--GQSLGQFNGVVAS 130 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~--G~~~~~~d~VVla 130 (282)
..+...+..+++++++++|.+|+. ++..+...+ |+.+ .+|.||++
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~----~~v~~~~~~~~g~~i-~~D~vv~a 251 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEP----DKVIYEDLNGNTHEV-PAKFTMFM 251 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECS----SEEEEECTTSCEEEE-ECSEEEEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeC----CeEEEEecCCCceEE-eeeEEEEC
Confidence 333334456899999999999973 234454322 4343 79999998
No 188
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=37.69 E-value=66 Score=26.99 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=32.8
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCC--C---eEEEc-cCCC-ccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKN--L---WSVSG-LDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~--~---w~l~~-~~G~-~~~~~d~VVla 130 (282)
..+.+.+.+..+++++++++|.+|.. +++ + ..+.. .+|+ ....+|.||++
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYG--DGERDVLGGLKVKNVVTGDVSDLKVSGLFFA 254 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeC--CCCccceeeEEEEecCCCceEEEecCEEEEE
Confidence 34455565556788999999999986 442 2 44432 1453 22379999999
No 189
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=37.68 E-value=28 Score=28.65 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=26.6
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
..+++++. ++|.+|.. ++ .+.+.+|+.+ .+|.||++
T Consensus 186 ~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~-~~D~vi~a 221 (297)
T 3fbs_A 186 ARGVRVET-TRIREIAG--HA---DVVLADGRSI-ALAGLFTQ 221 (297)
T ss_dssp HTTCEEEC-SCEEEEET--TE---EEEETTSCEE-EESEEEEC
T ss_pred HCCcEEEc-ceeeeeec--CC---eEEeCCCCEE-EEEEEEEc
Confidence 45677875 88888874 32 6667778664 79999999
No 190
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=37.61 E-value=28 Score=29.06 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=25.1
Q ss_pred CchHHHHHHhcCCCCeeEcceeEEEEEee---cCCCCeEEEccCCCc
Q 023469 77 GMNSICKALCHQPGVESKFGVGVGRFEWL---EDKNLWSVSGLDGQS 120 (282)
Q Consensus 77 Gm~~l~~~La~~l~~~v~~~~~V~~i~~~---~~~~~w~l~~~~G~~ 120 (282)
||++|+..+.+-.| .+|.++++. ..+..|+|+++||+.
T Consensus 1 g~~~v~a~~~~l~G------~~v~~v~~~g~G~~~~vyrv~l~DG~~ 41 (288)
T 3f7w_A 1 GVNSVAARVTELTG------REVAAVAERGHSHRWHLYRVELADGTP 41 (288)
T ss_dssp CCHHHHHHHHHHHC------CCEEEEEEEEEETTEEEEEEEETTSCE
T ss_pred ChHHHHHHHHHhcC------CCeEEEEecCCCCCeEEEEEEECCCCE
Confidence 89999999997444 445555541 122348998888853
No 191
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=37.42 E-value=41 Score=28.53 Aligned_cols=49 Identities=12% Similarity=0.058 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCC--eEEEc-cCCC-ccccccEEEec
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNL--WSVSG-LDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~--w~l~~-~~G~-~~~~~d~VVla 130 (282)
.+.+.+.+..+++++++++|.+|.. +++. ..+.. .+|+ ....+|.||++
T Consensus 195 ~~~~~~~~~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2a87_A 195 IMLDRARNNDKIRFLTNHTVVAVDG--DTTVTGLRVRDTNTGAETTLPVTGVFVA 247 (335)
T ss_dssp THHHHHHHCTTEEEECSEEEEEEEC--SSSCCEEEEEEETTSCCEEECCSCEEEC
T ss_pred HHHHHHhccCCcEEEeCceeEEEec--CCcEeEEEEEEcCCCceEEeecCEEEEc
Confidence 3444555556788999999999985 4322 44432 1442 22379999999
No 192
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=37.23 E-value=53 Score=30.81 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=32.8
Q ss_pred hHHHHHHhc---CCCCeeEcceeEEEEEeecCCC-Ce-EEEcc------CC---------CccccccEEEecC
Q 023469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKN-LW-SVSGL------DG---------QSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~-~w-~l~~~------~G---------~~~~~~d~VVla~ 131 (282)
..+.+.|.+ ..+++|+++++|.+|.. +++ .. .|.+. +| .. ..+|.||+|+
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~-i~Ad~VV~Ad 213 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLE-LHAKVTIFAE 213 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCE-EECSEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceE-EECCEEEEee
Confidence 345554543 34789999999999986 443 33 35544 34 23 3789999993
No 193
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=37.14 E-value=69 Score=26.74 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=30.7
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCC---CeEEEc-cCCCc-cccccEEEec
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKN---LWSVSG-LDGQS-LGQFNGVVAS 130 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~---~w~l~~-~~G~~-~~~~d~VVla 130 (282)
+.+.|. ..+++++++++|.+|.. +++ +..+.. .+|+. ...+|.||++
T Consensus 196 l~~~l~-~~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 196 YVQEIK-KRNIPYIMNAQVTEIVG--DGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp HHHHHH-HTTCCEECSEEEEEEEE--SSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred HHHHHh-cCCcEEEcCCeEEEEec--CCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 444454 35678999999999986 433 233332 25641 2379999999
No 194
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=36.90 E-value=34 Score=30.73 Aligned_cols=47 Identities=9% Similarity=0.121 Sum_probs=32.5
Q ss_pred chHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 78 m~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
+........+..+++++++++|.+++. + .+..++|+.+ .+|.||++.
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~----~--~v~~~~g~~~-~~D~vl~a~ 236 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING----N--EITFKSGKVE-HYDMIIEGV 236 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET----T--EEEETTSCEE-ECSEEEECC
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC----C--eeeecCCeEE-eeeeEEEEe
Confidence 334444444456789999999998863 2 3556677664 799999983
No 195
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=36.66 E-value=15 Score=33.05 Aligned_cols=47 Identities=13% Similarity=0.030 Sum_probs=32.4
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCC-ccccccEEEec
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVla 130 (282)
.+.+.+.++.++++++++.|.+++. ++..+...+|. ....+|.||++
T Consensus 204 ~~l~~~l~~~GV~~~~~~~v~~v~~----~~~~~~~~~g~~~~i~~d~vi~~ 251 (430)
T 3hyw_A 204 RLVEDLFAERNIDWIANVAVKAIEP----DKVIYEDLNGNTHEVPAKFTMFM 251 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS----SEEEEECTTSCEEEEECSEEEEE
T ss_pred HHHHHHHHhCCeEEEeCceEEEEeC----CceEEEeeCCCceEeecceEEEe
Confidence 3455555567899999999999963 34555554543 22379999998
No 196
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=36.59 E-value=54 Score=27.35 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=25.8
Q ss_pred eEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 93 SKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 93 v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
......+..+.. ...+.+.+.+.+|+.+ .||+||||.
T Consensus 77 ~~~~~~~~~~~~-~~~~~~~v~~~~g~~~-~a~~liiAT 113 (304)
T 4fk1_A 77 HYYEKTVVMITK-QSTGLFEIVTKDHTKY-LAERVLLAT 113 (304)
T ss_dssp EEEECCEEEEEE-CTTSCEEEEETTCCEE-EEEEEEECC
T ss_pred EEEeeEEEEeee-cCCCcEEEEECCCCEE-EeCEEEEcc
Confidence 344455666654 2556788888888765 799999993
No 197
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=36.31 E-value=50 Score=27.29 Aligned_cols=40 Identities=15% Similarity=0.338 Sum_probs=28.1
Q ss_pred HhcCCCCeeEcceeEEEEEeecCC--CCeE--EEccCCCccccccEEEecC
Q 023469 85 LCHQPGVESKFGVGVGRFEWLEDK--NLWS--VSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 85 La~~l~~~v~~~~~V~~i~~~~~~--~~w~--l~~~~G~~~~~~d~VVla~ 131 (282)
.++..+++++++ +|.++ + ++ +.|. +..++ . ..||.||+|.
T Consensus 71 ~~~~~~v~~~~~-~v~~i-~--~~~~~~~~v~~~~~~--~-~~~d~lvlAt 114 (315)
T 3r9u_A 71 QCMRFGLKHEMV-GVEQI-L--KNSDGSFTIKLEGGK--T-ELAKAVIVCT 114 (315)
T ss_dssp HHTTTCCEEECC-CEEEE-E--ECTTSCEEEEETTSC--E-EEEEEEEECC
T ss_pred HHHHcCcEEEEE-EEEEE-e--cCCCCcEEEEEecCC--E-EEeCEEEEee
Confidence 344567888888 88888 6 44 6798 44333 3 3799999993
No 198
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=35.82 E-value=22 Score=32.49 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=30.3
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCC---eEEEccCCCccccccEEEecC
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~---w~l~~~~G~~~~~~d~VVla~ 131 (282)
..|.+.+ +..+++++.++.| +|.. +++. +.+...+|+ + .+|.||+|+
T Consensus 123 ~~L~~~~-~~~gv~i~~~~~v-~l~~--~~~~v~Gv~v~~~~g~-~-~a~~VVlAt 172 (472)
T 2e5v_A 123 NFLLKLA-REEGIPIIEDRLV-EIRV--KDGKVTGFVTEKRGLV-E-DVDKLVLAT 172 (472)
T ss_dssp HHHHHHH-HHTTCCEECCCEE-EEEE--ETTEEEEEEETTTEEE-C-CCSEEEECC
T ss_pred HHHHHHH-HhCCCEEEECcEE-EEEE--eCCEEEEEEEEeCCCe-E-EeeeEEECC
Confidence 3444444 3457889999999 9975 3443 234334443 3 589999994
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=35.43 E-value=39 Score=30.24 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=29.7
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEc-cCCCc-cccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~~-~~~~d~VVla~ 131 (282)
.++++++++.|..|.. .++.+.+.. .+|+. ...||+||+|.
T Consensus 69 ~gv~~~~~~~v~~i~~--~~~~v~~~~~~~g~~~~~~~d~lviAt 111 (447)
T 1nhp_A 69 RGVNVFSNTEITAIQP--KEHQVTVKDLVSGEERVENYDKLIISP 111 (447)
T ss_dssp TTCEEEETEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred CCCEEEECCEEEEEeC--CCCEEEEEecCCCceEEEeCCEEEEcC
Confidence 4678999999999986 566676654 34542 13799999993
No 200
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=34.05 E-value=27 Score=31.42 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=29.6
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEc-cCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~~~~~~d~VVla~ 131 (282)
.+.+++++++|.+|++ ..+.|.+.. .++..+ .||.||+|.
T Consensus 71 ~gi~~~~~~~V~~id~--~~~~v~v~~~~~~~~~-~~d~lviAt 111 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDV--ENQLIAWTRKEEQQWY-SYDKLILAT 111 (452)
T ss_dssp TTEEEECSCEEEEEET--TTTEEEEEETTEEEEE-ECSEEEECC
T ss_pred CCCEEEECCEEEEEEC--CCCEEEEEecCceEEE-EcCEEEECC
Confidence 5677899999999997 667787752 233333 799999994
No 201
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=33.60 E-value=38 Score=32.59 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=31.4
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCCC-eEEEccCCCccccccEEEecC
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVla~ 131 (282)
|.+.+.+..+++| +++.|..|.. +++. +.|.+.+|..+ .+|.||+|+
T Consensus 130 L~e~Le~~~GV~I-~~~~V~~L~~--e~g~V~GV~t~dG~~I-~Ad~VVLAT 177 (651)
T 3ces_A 130 VRTALENQPNLMI-FQQAVEDLIV--ENDRVVGAVTQMGLKF-RAKAVVLTV 177 (651)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEE--SSSBEEEEEETTSEEE-EEEEEEECC
T ss_pred HHHHHHhCCCCEE-EEEEEEEEEe--cCCEEEEEEECCCCEE-ECCEEEEcC
Confidence 3334433246777 6789999986 4444 46777777544 799999994
No 202
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=32.80 E-value=71 Score=27.25 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=27.2
Q ss_pred CCCeeEcceeEEEEEeecCCC---CeEEEccCCC-ccccccEEEec
Q 023469 89 PGVESKFGVGVGRFEWLEDKN---LWSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~---~w~l~~~~G~-~~~~~d~VVla 130 (282)
.+++++++++|.+|.. .++ +..+...+|+ ....+|.||++
T Consensus 215 ~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~g~~~~i~~D~vi~a 258 (360)
T 3ab1_A 215 GTIDVYLETEVASIEE--SNGVLTRVHLRSSDGSKWTVEADRLLIL 258 (360)
T ss_dssp TSEEEESSEEEEEEEE--ETTEEEEEEEEETTCCEEEEECSEEEEC
T ss_pred CceEEEcCcCHHHhcc--CCCceEEEEEEecCCCeEEEeCCEEEEC
Confidence 3578999999999986 333 2333323663 22379999999
No 203
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=31.57 E-value=53 Score=29.29 Aligned_cols=38 Identities=8% Similarity=0.265 Sum_probs=27.1
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
..+++++. ..|..|+. .++ .+.+++|+.+ .||.||+|.
T Consensus 71 ~~gv~~~~-~~v~~id~--~~~--~V~~~~g~~i-~~d~lviAt 108 (437)
T 3sx6_A 71 RKGIHFIA-QSAEQIDA--EAQ--NITLADGNTV-HYDYLMIAT 108 (437)
T ss_dssp TTTCEEEC-SCEEEEET--TTT--EEEETTSCEE-ECSEEEECC
T ss_pred HCCCEEEE-eEEEEEEc--CCC--EEEECCCCEE-ECCEEEECC
Confidence 45677764 58999985 433 5666777654 799999994
No 204
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=31.22 E-value=29 Score=33.32 Aligned_cols=44 Identities=20% Similarity=0.099 Sum_probs=29.2
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc---cCCCccccccEEEec
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQSLGQFNGVVAS 130 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~---~~G~~~~~~d~VVla 130 (282)
+.+.|. ..+++++++++|.+|+. + +-.+.. .+++.+ .+|.||+|
T Consensus 573 l~~~l~-~~GV~i~~~~~V~~i~~--~--~~~v~~~~~~~~~~i-~aD~VV~A 619 (690)
T 3k30_A 573 IQRRLI-ENGVARVTDHAVVAVGA--G--GVTVRDTYASIEREL-ECDAVVMV 619 (690)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEET--T--EEEEEETTTCCEEEE-ECSEEEEE
T ss_pred HHHHHH-HCCCEEEcCcEEEEEEC--C--eEEEEEccCCeEEEE-ECCEEEEC
Confidence 344444 46889999999999984 3 233432 233333 79999999
No 205
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=30.51 E-value=45 Score=31.96 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=31.1
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeE-EEccCCCccccccEEEecC
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVla~ 131 (282)
.+.+.+.+..++++. +..|..|.. +++++. |.+.+|..+ .+|.||+|+
T Consensus 122 ~L~~~l~~~~GV~I~-~~~V~~L~~--d~g~V~GV~t~~G~~i-~Ad~VVLAT 170 (641)
T 3cp8_A 122 YMRRIVEHEPNIDLL-QDTVIGVSA--NSGKFSSVTVRSGRAI-QAKAAILAC 170 (641)
T ss_dssp HHHHHHHTCTTEEEE-ECCEEEEEE--ETTEEEEEEETTSCEE-EEEEEEECC
T ss_pred HHHHHHHhCCCCEEE-eeEEEEEEe--cCCEEEEEEECCCcEE-EeCEEEECc
Confidence 344444432366774 568999876 445544 767777654 799999994
No 206
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=29.79 E-value=54 Score=29.32 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=28.8
Q ss_pred HHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 82 ~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+.|. .. +++++++.|.+++. .+ +......+|+.+ .+|.||++.
T Consensus 197 ~~~l~-~~-v~i~~~~~v~~i~~--~~-~v~~v~~~g~~i-~~D~Vv~a~ 240 (449)
T 3kd9_A 197 EEKLK-KH-VNLRLQEITMKIEG--EE-RVEKVVTDAGEY-KAELVILAT 240 (449)
T ss_dssp HHHHT-TT-SEEEESCCEEEEEC--SS-SCCEEEETTEEE-ECSEEEECS
T ss_pred HHHHH-hC-cEEEeCCeEEEEec--cC-cEEEEEeCCCEE-ECCEEEEee
Confidence 33444 34 88999999999985 33 332223355444 799999993
No 207
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=29.33 E-value=68 Score=30.40 Aligned_cols=48 Identities=21% Similarity=0.101 Sum_probs=31.7
Q ss_pred HHHHHhcCCCC--eeEcceeEEEEEeecCC----CCeEEEcc------CCC-ccccccEEEecC
Q 023469 81 ICKALCHQPGV--ESKFGVGVGRFEWLEDK----NLWSVSGL------DGQ-SLGQFNGVVASD 131 (282)
Q Consensus 81 l~~~La~~l~~--~v~~~~~V~~i~~~~~~----~~w~l~~~------~G~-~~~~~d~VVla~ 131 (282)
|.+.+.+ .++ +|+++++|.+|+. ++ .++.+... +|+ ....+|.||.|+
T Consensus 147 L~~~a~~-~g~~v~v~~~~~v~~l~~--~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgAD 207 (639)
T 2dkh_A 147 YLERMRN-SPSRLEPHYARRVLDVKV--DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCD 207 (639)
T ss_dssp HHHHHHH-STTCCCCBCSEEEEEEEE--CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECC
T ss_pred HHHHHHh-CCCCcEEecCCEEEEEEE--CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECC
Confidence 3344443 444 8999999999986 43 25777654 452 223789999994
No 208
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=28.58 E-value=39 Score=30.34 Aligned_cols=41 Identities=10% Similarity=0.221 Sum_probs=29.4
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEcc-CC--CccccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-DG--QSLGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~-~G--~~~~~~d~VVla~ 131 (282)
..+++++++++|..|+. .++.+.+... +| .. ..||.||+|.
T Consensus 70 ~~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~-~~~d~lviAt 113 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDP--ETKTIKVKDLITNEEKT-EAYDKLIMTT 113 (452)
T ss_dssp HTTCEEEESEEEEEEEG--GGTEEEEEETTTCCEEE-EECSEEEECC
T ss_pred HcCCEEEeCCEEEEEEc--CCCEEEEEecCCCceEE-EECCEEEEcc
Confidence 35678999999999986 5566777542 22 23 3799999994
No 209
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=27.88 E-value=54 Score=29.24 Aligned_cols=47 Identities=15% Similarity=0.020 Sum_probs=30.4
Q ss_pred hHHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEc--cCC-----CccccccEEEec
Q 023469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG--LDG-----QSLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~--~~G-----~~~~~~d~VVla 130 (282)
....+...+..+++++++++|.+|+. + +..+.. .+| .. ..+|.||++
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~--~--~v~~~~~~~~g~~~~~~~-i~~D~vv~~ 264 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVED--N--KMYVTQVDEKGETIKEMV-LPVKFGMMI 264 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET--T--EEEEEEECTTSCEEEEEE-EECSEEEEE
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEC--C--eEEEEecccCCccccceE-EEEeEEEEc
Confidence 33444444456899999999999973 2 344432 333 23 379999998
No 210
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=25.30 E-value=1.1e+02 Score=28.80 Aligned_cols=48 Identities=4% Similarity=-0.165 Sum_probs=30.3
Q ss_pred HHHHHhcCCCCeeEcceeEEEEEeecC-CCC-eEEE--c-cCCCc-cccccEEEecC
Q 023469 81 ICKALCHQPGVESKFGVGVGRFEWLED-KNL-WSVS--G-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 81 l~~~La~~l~~~v~~~~~V~~i~~~~~-~~~-w~l~--~-~~G~~-~~~~d~VVla~ 131 (282)
|.+.+.+ .+++|+.++.|..|.. + +++ +.+. . .+|+. ...++.||+|+
T Consensus 149 L~~~~~~-~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAt 202 (588)
T 2wdq_A 149 LYQQNLK-NHTTIFSEWYALDLVK--NQDGAVVGCTALCIETGEVVYFKARATVLAT 202 (588)
T ss_dssp HHHHHHH-TTCEEEETEEEEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred HHHHHHh-CCCEEEeCcEEEEEEE--CCCCEEEEEEEEEcCCCeEEEEEcCEEEECC
Confidence 3444333 4789999999999986 3 333 2232 2 45642 22689999994
No 211
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.22 E-value=36 Score=29.74 Aligned_cols=37 Identities=11% Similarity=0.014 Sum_probs=27.6
Q ss_pred hcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEec
Q 023469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (282)
Q Consensus 86 a~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla 130 (282)
.+..+++++++++|.+++. + .+.+++|+ + .+|.||++
T Consensus 193 l~~~gV~i~~~~~v~~i~~----~--~v~~~~g~-i-~~D~vi~a 229 (367)
T 1xhc_A 193 LEETGVKFFLNSELLEANE----E--GVLTNSGF-I-EGKVKICA 229 (367)
T ss_dssp HHHTTEEEECSCCEEEECS----S--EEEETTEE-E-ECSCEEEE
T ss_pred HHHCCCEEEcCCEEEEEEe----e--EEEECCCE-E-EcCEEEEC
Confidence 3346789999999999862 2 35556775 3 89999998
No 212
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=24.95 E-value=73 Score=30.35 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=31.0
Q ss_pred HHHHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCC-ccccccEEEec
Q 023469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 80 ~l~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVla 130 (282)
...+...+..+++++++++|.+|.. ++..+. .+|+ ....+|.||++
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~G~~~~i~~D~Vi~a 623 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-INGETQVLAVDNVVIC 623 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ETTEEEEECCSEEEEC
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cCCeEEEEeCCEEEEC
Confidence 3434434456889999999999973 245554 4663 22379999999
No 213
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.52 E-value=67 Score=29.29 Aligned_cols=50 Identities=8% Similarity=-0.085 Sum_probs=33.6
Q ss_pred hHHHHHHhcCC--CCeeEcceeEEEEEeecCCCCeEEEc-cCCC-ccccccEEEec
Q 023469 79 NSICKALCHQP--GVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVAS 130 (282)
Q Consensus 79 ~~l~~~La~~l--~~~v~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVla 130 (282)
..+.+.+.+.+ ++++++++.|.+|.. .++.+.+.. ++|+ ....||+||+|
T Consensus 161 ~~~~~~l~~~l~~~v~~~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~d~lvlA 214 (493)
T 1y56_A 161 RKVVEELVGKLNENTKIYLETSALGVFD--KGEYFLVPVVRGDKLIEILAKRVVLA 214 (493)
T ss_dssp HHHHHHHHHTCCTTEEEETTEEECCCEE--CSSSEEEEEEETTEEEEEEESCEEEC
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEc--CCcEEEEEEecCCeEEEEECCEEEEC
Confidence 34555555433 677899999999987 666676644 3443 12379999999
No 214
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=23.43 E-value=82 Score=29.71 Aligned_cols=41 Identities=15% Similarity=-0.083 Sum_probs=27.7
Q ss_pred CC-CeeEcceeEEEEEeecCCCC---eEEE-ccCCCc-cccccEEEecC
Q 023469 89 PG-VESKFGVGVGRFEWLEDKNL---WSVS-GLDGQS-LGQFNGVVASD 131 (282)
Q Consensus 89 l~-~~v~~~~~V~~i~~~~~~~~---w~l~-~~~G~~-~~~~d~VVla~ 131 (282)
.+ ++|+.++.|..|.. ++++ ..+. ..+|+. ...++.||+|+
T Consensus 147 ~gnv~i~~~~~v~~l~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 147 FPQIQRFDEHFVLDILV--DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp CTTEEEEETEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred CCCcEEEeCCEEEEEEE--eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 45 78999999999986 3442 3232 356651 23689999994
No 215
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=23.38 E-value=1e+02 Score=29.16 Aligned_cols=50 Identities=10% Similarity=-0.110 Sum_probs=31.6
Q ss_pred HHHHHHhc---CCCCeeEcceeEEEEEeecCCCC---eEEEc-cCCCc-cccccEEEecC
Q 023469 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL---WSVSG-LDGQS-LGQFNGVVASD 131 (282)
Q Consensus 80 ~l~~~La~---~l~~~v~~~~~V~~i~~~~~~~~---w~l~~-~~G~~-~~~~d~VVla~ 131 (282)
.+.+.|.+ ..+++|+.++.|..|.. ++++ ..+.. .+|+. ...+++||+|+
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAT 213 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLM--ENGECRGVIALCIEDGTIHRFRAKNTVIAT 213 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEE--ECCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 44454443 35789999999999986 3332 23322 45642 23689999994
No 216
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=22.69 E-value=91 Score=27.25 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=25.8
Q ss_pred CCCCeeEcceeEEEEEeecCCCCeEEEccCCCc---cccccEEEecC
Q 023469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVASD 131 (282)
Q Consensus 88 ~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~---~~~~d~VVla~ 131 (282)
..+++++.+ .|.++++ .++. +...+|+. ...||.||+|.
T Consensus 68 ~~gv~~~~~-~v~~i~~--~~~~--V~~~~g~~~~~~~~~d~lViAt 109 (409)
T 3h8l_A 68 EKGIQFQEG-TVEKIDA--KSSM--VYYTKPDGSMAEEEYDYVIVGI 109 (409)
T ss_dssp GGTCEEEEC-EEEEEET--TTTE--EEEECTTSCEEEEECSEEEECC
T ss_pred hCCeEEEEe-eEEEEeC--CCCE--EEEccCCcccceeeCCEEEECC
Confidence 456778877 8999986 4444 44444432 12799999993
No 217
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.63 E-value=59 Score=28.58 Aligned_cols=37 Identities=8% Similarity=0.131 Sum_probs=27.4
Q ss_pred CCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 89 l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.++++++ ++|.+|++ ... .+..++|+.+ .||+||+|.
T Consensus 70 ~~i~~~~-~~v~~id~--~~~--~v~~~~g~~~-~~d~lvlAt 106 (404)
T 3fg2_P 70 QAIELIS-DRMVSIDR--EGR--KLLLASGTAI-EYGHLVLAT 106 (404)
T ss_dssp TTEEEEC-CCEEEEET--TTT--EEEESSSCEE-ECSEEEECC
T ss_pred CCCEEEE-EEEEEEEC--CCC--EEEECCCCEE-ECCEEEEee
Confidence 4677888 99999986 433 5566677654 799999993
No 218
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.36 E-value=78 Score=28.29 Aligned_cols=41 Identities=22% Similarity=0.170 Sum_probs=28.6
Q ss_pred HhcCCCCeeEcceeEEEEEeecCCCCeEEEccCC-CccccccEEEecC
Q 023469 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG-QSLGQFNGVVASD 131 (282)
Q Consensus 85 La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G-~~~~~~d~VVla~ 131 (282)
+.+..+++++.++.+. +. .+.|.+.+.+| +.+ .||.||+|.
T Consensus 100 ~~~~~gv~~~~g~~~~-id----~~~v~V~~~~G~~~i-~~d~lViAT 141 (455)
T 1ebd_A 100 LLKGNKVEIVKGEAYF-VD----ANTVRVVNGDSAQTY-TFKNAIIAT 141 (455)
T ss_dssp HHHTTTCEEEESEEEE-EE----TTEEEEEETTEEEEE-ECSEEEECC
T ss_pred HHHhCCCEEEEEEEEE-cc----CCeEEEEeCCCcEEE-EeCEEEEec
Confidence 3345678899998664 43 35688877766 343 799999994
No 219
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=22.13 E-value=91 Score=27.99 Aligned_cols=44 Identities=9% Similarity=-0.039 Sum_probs=30.2
Q ss_pred HHHHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCc--cccccEEEecC
Q 023469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS--LGQFNGVVASD 131 (282)
Q Consensus 82 ~~~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~--~~~~d~VVla~ 131 (282)
.+.+.+..+++++.+ +|..+.. +.+.+...+|+. + .||+||+|.
T Consensus 95 ~~~~~~~~~v~~~~g-~v~~id~----~~~~V~~~~g~~~~~-~~d~lviAt 140 (466)
T 3l8k_A 95 KRNMSQYETLTFYKG-YVKIKDP----THVIVKTDEGKEIEA-ETRYMIIAS 140 (466)
T ss_dssp HHHHTTCTTEEEESE-EEEEEET----TEEEEEETTSCEEEE-EEEEEEECC
T ss_pred HHHHHHhCCCEEEEe-EEEEecC----CeEEEEcCCCcEEEE-ecCEEEECC
Confidence 344555567777777 5666653 468888777754 4 799999993
No 220
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=22.11 E-value=41 Score=29.33 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=29.0
Q ss_pred HHhcCCCCeeEcceeEEEEEeecCCCCeEEEccCCCccccccEEEecC
Q 023469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (282)
Q Consensus 84 ~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVla~ 131 (282)
.+.+..+++++++++|..+.. . .+.+..+++ .+ .||.||+|.
T Consensus 68 ~~~~~~~v~~~~~~~v~~i~~--~--~~~v~~~~~-~~-~~d~lviAt 109 (384)
T 2v3a_A 68 AMAEQLNARILTHTRVTGIDP--G--HQRIWIGEE-EV-RYRDLVLAW 109 (384)
T ss_dssp HHHHHTTCEEECSCCCCEEEG--G--GTEEEETTE-EE-ECSEEEECC
T ss_pred HHHHhCCcEEEeCCEEEEEEC--C--CCEEEECCc-EE-ECCEEEEeC
Confidence 344445678899999999985 3 345655444 33 799999994
No 221
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=21.46 E-value=79 Score=28.24 Aligned_cols=45 Identities=11% Similarity=0.040 Sum_probs=29.1
Q ss_pred HHhcCCCCeeEcceeEEEEEeecCCCCeEEEccC-CC-ccccccEEEec
Q 023469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQ-SLGQFNGVVAS 130 (282)
Q Consensus 84 ~La~~l~~~v~~~~~V~~i~~~~~~~~w~l~~~~-G~-~~~~~d~VVla 130 (282)
.+.+..+++++++++|.+|.. ..+...+.... ++ ....||+||||
T Consensus 65 ~~~~~~~i~~~~~~~V~~id~--~~~~~~~~~~~~~~~~~~~yd~lVIA 111 (437)
T 4eqs_A 65 KFYDRKQITVKTYHEVIAIND--ERQTVSVLNRKTNEQFEESYDKLILS 111 (437)
T ss_dssp HHHHHHCCEEEETEEEEEEET--TTTEEEEEETTTTEEEEEECSEEEEC
T ss_pred HHHHhcCCEEEeCCeEEEEEc--cCcEEEEEeccCCceEEEEcCEEEEC
Confidence 334445678899999999986 55555554322 21 11379999999
No 222
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=20.54 E-value=1e+02 Score=28.13 Aligned_cols=50 Identities=14% Similarity=-0.046 Sum_probs=29.6
Q ss_pred CCeeEcceeEEEEEeecCC-CC--eEEEc--cCC---C-ccccccEEEecCCCCCcchhhh
Q 023469 90 GVESKFGVGVGRFEWLEDK-NL--WSVSG--LDG---Q-SLGQFNGVVASDKNVVSPRFRD 141 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~-~~--w~l~~--~~G---~-~~~~~d~VVla~~~~pa~~~~~ 141 (282)
+++|++++.|++|.. ++ ++ ..+.. .+| + ....++.||||.-..-.|+++.
T Consensus 236 n~~i~~~~~V~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQ--TKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp SEEEEESEEEEEEEE--CTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 378999999999987 43 22 23333 355 1 1236789999933333333333
No 223
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=20.44 E-value=94 Score=28.43 Aligned_cols=40 Identities=8% Similarity=-0.059 Sum_probs=26.2
Q ss_pred CCeeEcceeEEEEEeecCC-C--CeEEEc--cCCC----ccccccEEEecC
Q 023469 90 GVESKFGVGVGRFEWLEDK-N--LWSVSG--LDGQ----SLGQFNGVVASD 131 (282)
Q Consensus 90 ~~~v~~~~~V~~i~~~~~~-~--~w~l~~--~~G~----~~~~~d~VVla~ 131 (282)
+++|++++.|.+|.. ++ + ...|.. .+|. ....++.|||+.
T Consensus 241 n~~i~~~~~v~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaa 289 (507)
T 1coy_A 241 KLTITTLHRVTKVAP--ATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAA 289 (507)
T ss_dssp CEEEECSEEEEEEEE--CSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECS
T ss_pred CcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCcccccEEEEeCEEEEcc
Confidence 478999999999987 43 2 233333 2452 223678999993
Done!