Query 023470
Match_columns 282
No_of_seqs 302 out of 2978
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:20:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023470.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023470hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g5l_A Putative S-adenosylmeth 99.8 2.6E-20 8.8E-25 159.0 12.4 110 89-201 34-152 (253)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.9E-19 1E-23 153.6 12.8 161 83-248 56-242 (261)
3 4hg2_A Methyltransferase type 99.8 8.1E-19 2.8E-23 150.5 12.5 105 87-195 29-136 (257)
4 3l8d_A Methyltransferase; stru 99.8 1.3E-18 4.4E-23 147.2 11.2 110 86-198 42-157 (242)
5 2p7i_A Hypothetical protein; p 99.8 1.4E-18 4.7E-23 147.1 10.8 114 85-203 31-150 (250)
6 3dli_A Methyltransferase; PSI- 99.8 5.9E-19 2E-23 149.5 7.5 141 94-238 38-185 (240)
7 2gs9_A Hypothetical protein TT 99.8 2.1E-17 7.2E-22 136.9 15.2 109 86-199 25-137 (211)
8 3bkw_A MLL3908 protein, S-aden 99.7 4.8E-19 1.6E-23 149.8 4.6 100 97-199 43-149 (243)
9 3hnr_A Probable methyltransfer 99.7 1.6E-17 5.5E-22 138.4 12.8 162 97-279 45-215 (220)
10 4htf_A S-adenosylmethionine-de 99.7 1.1E-17 3.7E-22 145.2 9.9 110 87-199 58-178 (285)
11 1vl5_A Unknown conserved prote 99.7 8.9E-18 3.1E-22 143.8 8.8 98 95-195 35-141 (260)
12 1vlm_A SAM-dependent methyltra 99.7 7.1E-17 2.4E-21 134.8 12.1 105 87-198 38-143 (219)
13 3h2b_A SAM-dependent methyltra 99.7 2.4E-17 8.3E-22 135.7 9.0 98 98-198 42-145 (203)
14 2a14_A Indolethylamine N-methy 99.7 3.7E-18 1.3E-22 146.9 3.6 163 95-279 53-263 (263)
15 3kkz_A Uncharacterized protein 99.7 1.6E-17 5.6E-22 142.8 7.6 97 95-195 44-151 (267)
16 2aot_A HMT, histamine N-methyl 99.7 1.3E-17 4.3E-22 145.6 6.8 100 97-197 52-175 (292)
17 2o57_A Putative sarcosine dime 99.7 6.1E-17 2.1E-21 141.3 11.0 99 95-196 80-189 (297)
18 3ocj_A Putative exported prote 99.7 3.6E-17 1.2E-21 143.5 9.6 155 89-248 110-288 (305)
19 3dlc_A Putative S-adenosyl-L-m 99.7 6E-18 2E-22 140.4 3.9 96 98-196 44-150 (219)
20 1xxl_A YCGJ protein; structura 99.7 4.4E-17 1.5E-21 137.9 9.3 100 94-196 18-126 (239)
21 2yqz_A Hypothetical protein TT 99.7 1.3E-16 4.6E-21 136.2 12.3 113 82-197 21-144 (263)
22 3dtn_A Putative methyltransfer 99.7 6.5E-17 2.2E-21 136.1 9.9 149 96-248 43-211 (234)
23 3e23_A Uncharacterized protein 99.7 3.1E-17 1.1E-21 136.0 7.8 103 91-197 37-144 (211)
24 3cc8_A Putative methyltransfer 99.7 3.8E-17 1.3E-21 136.6 8.1 105 96-201 31-137 (230)
25 3bus_A REBM, methyltransferase 99.7 8.1E-17 2.8E-21 138.6 10.3 98 96-196 60-168 (273)
26 1nkv_A Hypothetical protein YJ 99.7 7.3E-17 2.5E-21 137.6 9.7 98 95-196 34-142 (256)
27 3f4k_A Putative methyltransfer 99.7 5.5E-17 1.9E-21 138.4 8.4 98 95-196 44-152 (257)
28 3dh0_A SAM dependent methyltra 99.7 2.7E-16 9.1E-21 130.9 12.4 99 95-196 35-145 (219)
29 3sm3_A SAM-dependent methyltra 99.7 5.6E-17 1.9E-21 136.1 8.1 104 91-197 24-144 (235)
30 3ege_A Putative methyltransfer 99.7 2.4E-16 8.2E-21 135.2 12.2 98 96-197 33-133 (261)
31 3ccf_A Cyclopropane-fatty-acyl 99.7 2.9E-16 9.8E-21 135.9 12.2 100 95-198 55-158 (279)
32 3ujc_A Phosphoethanolamine N-m 99.7 1.8E-17 6.1E-22 141.8 4.1 99 95-196 53-161 (266)
33 2avn_A Ubiquinone/menaquinone 99.7 1.7E-16 5.9E-21 136.0 10.0 111 85-198 42-156 (260)
34 3vc1_A Geranyl diphosphate 2-C 99.7 3.8E-16 1.3E-20 137.4 12.2 97 96-196 116-223 (312)
35 4e2x_A TCAB9; kijanose, tetron 99.7 7.5E-17 2.6E-21 147.5 7.7 104 96-199 106-213 (416)
36 3jwh_A HEN1; methyltransferase 99.7 9E-17 3.1E-21 133.9 7.4 97 97-197 29-143 (217)
37 3mgg_A Methyltransferase; NYSG 99.7 1.8E-16 6.3E-21 136.7 9.5 99 95-196 35-144 (276)
38 3i9f_A Putative type 11 methyl 99.7 1.2E-16 4.1E-21 127.9 7.3 145 95-279 15-163 (170)
39 4fsd_A Arsenic methyltransfera 99.7 2.5E-16 8.4E-21 142.6 10.2 98 96-196 82-205 (383)
40 1pjz_A Thiopurine S-methyltran 99.7 3.9E-17 1.3E-21 135.1 4.4 96 95-193 20-139 (203)
41 2p8j_A S-adenosylmethionine-de 99.7 2.4E-16 8.2E-21 130.2 9.0 111 82-196 9-130 (209)
42 2vdw_A Vaccinia virus capping 99.7 1.2E-16 4.2E-21 140.1 7.4 104 97-200 48-175 (302)
43 3thr_A Glycine N-methyltransfe 99.6 3.6E-16 1.2E-20 136.0 10.0 114 83-201 45-182 (293)
44 3g5t_A Trans-aconitate 3-methy 99.6 4.4E-16 1.5E-20 136.1 10.1 93 96-192 35-147 (299)
45 3gu3_A Methyltransferase; alph 99.6 9.9E-16 3.4E-20 133.0 11.4 98 95-196 20-128 (284)
46 1y8c_A S-adenosylmethionine-de 99.6 5E-16 1.7E-20 131.1 9.2 114 83-200 23-148 (246)
47 3pfg_A N-methyltransferase; N, 99.6 8.9E-16 3E-20 131.5 10.6 108 83-194 36-151 (263)
48 3ou2_A SAM-dependent methyltra 99.6 6.3E-16 2.2E-20 128.2 9.2 99 95-197 44-149 (218)
49 2g72_A Phenylethanolamine N-me 99.6 3.3E-16 1.1E-20 136.2 7.7 105 87-194 61-215 (289)
50 2p35_A Trans-aconitate 2-methy 99.6 7.9E-16 2.7E-20 131.2 9.7 98 96-197 32-135 (259)
51 3jwg_A HEN1, methyltransferase 99.6 7.2E-16 2.5E-20 128.4 9.3 97 97-197 29-143 (219)
52 3cgg_A SAM-dependent methyltra 99.6 1.1E-15 3.9E-20 124.1 10.1 105 90-197 39-150 (195)
53 3g07_A 7SK snRNA methylphospha 99.6 6.3E-16 2.1E-20 134.9 8.8 101 97-197 46-223 (292)
54 3ofk_A Nodulation protein S; N 99.6 6.4E-16 2.2E-20 128.4 8.4 98 97-198 51-158 (216)
55 3lcc_A Putative methyl chlorid 99.6 7.9E-16 2.7E-20 129.7 8.3 105 87-195 56-172 (235)
56 2ex4_A Adrenal gland protein A 99.6 4.9E-16 1.7E-20 131.5 7.0 97 97-196 79-187 (241)
57 3bgv_A MRNA CAP guanine-N7 met 99.6 5.8E-16 2E-20 136.3 7.6 115 82-199 19-160 (313)
58 1ve3_A Hypothetical protein PH 99.6 1.8E-15 6.1E-20 126.4 10.2 112 83-197 24-145 (227)
59 3hem_A Cyclopropane-fatty-acyl 99.6 2.4E-15 8.2E-20 131.6 11.3 96 95-196 70-185 (302)
60 2gb4_A Thiopurine S-methyltran 99.6 8E-16 2.7E-20 131.5 8.0 95 96-193 67-190 (252)
61 3d2l_A SAM-dependent methyltra 99.6 1.3E-15 4.5E-20 128.5 9.1 112 85-200 21-143 (243)
62 2pxx_A Uncharacterized protein 99.6 2.6E-15 8.8E-20 124.2 10.6 110 86-198 31-163 (215)
63 1kpg_A CFA synthase;, cyclopro 99.6 1.1E-15 3.7E-20 132.7 8.6 97 95-197 62-171 (287)
64 3e8s_A Putative SAM dependent 99.6 1.5E-15 5.3E-20 126.5 8.7 102 97-199 52-157 (227)
65 1ri5_A MRNA capping enzyme; me 99.6 1.4E-15 4.9E-20 132.2 8.2 107 92-201 59-181 (298)
66 3orh_A Guanidinoacetate N-meth 99.6 4.5E-16 1.5E-20 131.7 4.1 98 95-193 58-169 (236)
67 2zfu_A Nucleomethylin, cerebra 99.6 6.9E-15 2.4E-19 122.1 10.9 96 87-196 58-153 (215)
68 2kw5_A SLR1183 protein; struct 99.6 1.3E-15 4.4E-20 125.2 6.3 101 94-198 27-135 (202)
69 1p91_A Ribosomal RNA large sub 99.6 8E-15 2.7E-19 126.0 10.6 163 32-204 18-188 (269)
70 1xtp_A LMAJ004091AAA; SGPP, st 99.6 2E-15 7E-20 128.3 6.6 97 96-195 92-198 (254)
71 2fk8_A Methoxy mycolic acid sy 99.6 6.2E-15 2.1E-19 129.8 9.6 96 96-197 89-197 (318)
72 3ggd_A SAM-dependent methyltra 99.6 2.4E-15 8.2E-20 127.4 6.5 101 93-196 52-165 (245)
73 3bxo_A N,N-dimethyltransferase 99.6 3.4E-15 1.2E-19 125.7 7.3 109 84-196 27-143 (239)
74 2xvm_A Tellurite resistance pr 99.6 5.6E-15 1.9E-19 120.8 8.3 94 97-194 32-136 (199)
75 2qe6_A Uncharacterized protein 99.6 2E-14 6.8E-19 124.3 11.9 101 97-197 77-199 (274)
76 2ld4_A Anamorsin; methyltransf 99.6 1.3E-15 4.5E-20 122.7 4.1 85 95-195 10-102 (176)
77 3g2m_A PCZA361.24; SAM-depende 99.5 1.9E-14 6.5E-19 125.7 10.8 101 96-200 81-196 (299)
78 3htx_A HEN1; HEN1, small RNA m 99.5 2.9E-14 9.9E-19 137.1 11.5 112 83-200 709-840 (950)
79 2i62_A Nicotinamide N-methyltr 99.5 7.9E-15 2.7E-19 125.3 6.5 97 96-195 55-199 (265)
80 3m70_A Tellurite resistance pr 99.5 2.6E-14 9E-19 123.9 9.2 95 97-195 120-224 (286)
81 1zx0_A Guanidinoacetate N-meth 99.5 6.5E-15 2.2E-19 124.3 5.0 97 95-194 58-170 (236)
82 3mti_A RRNA methylase; SAM-dep 99.5 2.5E-14 8.7E-19 115.9 8.2 110 83-195 8-136 (185)
83 3iv6_A Putative Zn-dependent a 99.5 2.8E-14 9.4E-19 122.2 8.3 99 95-197 43-151 (261)
84 3fzg_A 16S rRNA methylase; met 99.5 1.1E-14 3.7E-19 117.7 5.0 107 84-195 36-152 (200)
85 3mq2_A 16S rRNA methyltransfer 99.5 2.2E-14 7.4E-19 119.4 6.2 99 95-197 25-143 (218)
86 1af7_A Chemotaxis receptor met 99.5 4.6E-14 1.6E-18 121.7 8.3 94 97-193 105-251 (274)
87 3q87_B N6 adenine specific DNA 99.5 3.6E-13 1.2E-17 108.0 12.8 103 87-196 13-125 (170)
88 1wzn_A SAM-dependent methyltra 99.5 1.4E-13 5E-18 116.8 9.8 107 87-197 30-148 (252)
89 3fpf_A Mtnas, putative unchara 99.5 1.7E-13 5.8E-18 118.7 10.0 95 94-196 119-224 (298)
90 4df3_A Fibrillarin-like rRNA/T 99.5 1.1E-13 3.6E-18 116.3 8.3 100 95-196 75-184 (233)
91 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.7E-14 9.4E-19 119.3 4.4 108 97-207 34-163 (218)
92 1ej0_A FTSJ; methyltransferase 99.4 1.5E-13 5E-18 109.7 7.7 98 95-198 20-140 (180)
93 3m33_A Uncharacterized protein 99.4 5.5E-14 1.9E-18 117.8 5.3 93 91-191 42-139 (226)
94 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.9E-13 1E-17 108.6 9.4 97 95-197 23-130 (178)
95 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.5E-13 8.6E-18 112.8 9.3 100 96-198 40-160 (214)
96 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.6E-13 5.4E-18 116.0 8.1 103 96-201 45-175 (235)
97 1dus_A MJ0882; hypothetical pr 99.4 2.3E-13 8E-18 110.3 8.6 100 96-199 51-162 (194)
98 3bkx_A SAM-dependent methyltra 99.4 1.7E-13 5.7E-18 117.9 8.1 100 95-195 41-160 (275)
99 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.4E-13 4.7E-18 114.5 7.2 101 97-200 38-159 (213)
100 3grz_A L11 mtase, ribosomal pr 99.4 1.8E-13 6.2E-18 112.7 7.9 105 83-195 46-160 (205)
101 3p9n_A Possible methyltransfer 99.4 2.1E-13 7.2E-18 111.0 8.2 113 82-197 28-156 (189)
102 3giw_A Protein of unknown func 99.4 3.4E-13 1.2E-17 115.5 9.5 99 99-197 80-203 (277)
103 1nt2_A Fibrillarin-like PRE-rR 99.4 3.5E-13 1.2E-17 111.9 8.9 99 95-196 55-163 (210)
104 3dp7_A SAM-dependent methyltra 99.4 8.8E-13 3E-17 118.4 12.1 95 97-194 179-287 (363)
105 3sso_A Methyltransferase; macr 99.4 8.9E-14 3.1E-18 124.7 5.4 102 90-196 209-326 (419)
106 3evz_A Methyltransferase; NYSG 99.4 3.4E-13 1.2E-17 113.0 8.7 105 91-197 49-182 (230)
107 3e05_A Precorrin-6Y C5,15-meth 99.4 1.1E-12 3.6E-17 108.0 11.1 97 95-197 38-145 (204)
108 3dmg_A Probable ribosomal RNA 99.4 3.7E-13 1.3E-17 121.5 8.7 98 97-197 233-343 (381)
109 3eey_A Putative rRNA methylase 99.4 2.3E-13 8E-18 111.3 6.4 106 87-195 12-140 (197)
110 2fyt_A Protein arginine N-meth 99.4 1.1E-12 3.9E-17 116.7 11.2 93 95-191 62-168 (340)
111 3uwp_A Histone-lysine N-methyl 99.4 2.1E-13 7.3E-18 122.5 6.4 103 87-193 162-287 (438)
112 3i53_A O-methyltransferase; CO 99.4 6.6E-13 2.3E-17 117.6 9.5 133 97-248 169-318 (332)
113 1x19_A CRTF-related protein; m 99.4 1E-12 3.6E-17 117.6 10.1 94 95-194 188-295 (359)
114 2r3s_A Uncharacterized protein 99.4 1.1E-12 3.6E-17 116.2 10.0 95 96-195 164-272 (335)
115 3gwz_A MMCR; methyltransferase 99.4 2.1E-12 7E-17 116.2 11.7 137 96-248 201-353 (369)
116 2plw_A Ribosomal RNA methyltra 99.4 1.4E-12 4.8E-17 106.9 9.6 104 87-196 10-156 (201)
117 1ws6_A Methyltransferase; stru 99.4 4.7E-13 1.6E-17 106.5 6.2 114 82-197 26-150 (171)
118 3lbf_A Protein-L-isoaspartate 99.4 3.4E-13 1.2E-17 111.4 5.4 93 95-196 75-176 (210)
119 3njr_A Precorrin-6Y methylase; 99.4 1.6E-12 5.5E-17 107.3 9.5 95 95-197 53-157 (204)
120 1qzz_A RDMB, aclacinomycin-10- 99.4 1.3E-12 4.3E-17 117.6 9.3 139 96-248 181-336 (374)
121 3p2e_A 16S rRNA methylase; met 99.4 6.9E-13 2.4E-17 111.3 6.9 97 95-194 22-139 (225)
122 1xdz_A Methyltransferase GIDB; 99.4 4.2E-13 1.4E-17 113.5 5.6 92 96-194 69-174 (240)
123 3q7e_A Protein arginine N-meth 99.4 1.1E-12 3.6E-17 117.3 8.3 94 96-193 65-172 (349)
124 3id6_C Fibrillarin-like rRNA/T 99.4 6.5E-12 2.2E-16 105.6 12.3 99 95-196 74-183 (232)
125 3reo_A (ISO)eugenol O-methyltr 99.4 7.6E-12 2.6E-16 112.5 13.5 92 96-194 202-300 (368)
126 1fp1_D Isoliquiritigenin 2'-O- 99.3 2.7E-12 9.2E-17 115.5 9.6 92 95-193 207-305 (372)
127 3hp7_A Hemolysin, putative; st 99.3 1.9E-12 6.5E-17 112.2 8.0 106 86-194 72-185 (291)
128 3p9c_A Caffeic acid O-methyltr 99.3 1.4E-11 4.6E-16 110.7 13.7 92 96-194 200-298 (364)
129 2ift_A Putative methylase HI07 99.3 1.3E-12 4.5E-17 107.5 6.5 110 83-197 40-166 (201)
130 1l3i_A Precorrin-6Y methyltran 99.3 4.3E-12 1.5E-16 102.5 9.4 96 95-197 31-137 (192)
131 1g6q_1 HnRNP arginine N-methyl 99.3 5.4E-12 1.9E-16 111.7 10.8 93 96-192 37-143 (328)
132 1vbf_A 231AA long hypothetical 99.3 2E-12 6.7E-17 108.4 7.6 94 95-197 68-168 (231)
133 3lst_A CALO1 methyltransferase 99.3 7.5E-12 2.6E-16 111.6 11.7 94 95-195 182-287 (348)
134 1fbn_A MJ fibrillarin homologu 99.3 3.1E-12 1E-16 107.5 8.6 91 95-194 72-178 (230)
135 1fp2_A Isoflavone O-methyltran 99.3 5.1E-12 1.8E-16 112.8 10.0 93 95-194 186-288 (352)
136 2b3t_A Protein methyltransfera 99.3 4.8E-12 1.6E-16 109.2 9.4 106 86-195 97-239 (276)
137 2yxd_A Probable cobalt-precorr 99.3 6.8E-12 2.3E-16 100.7 9.7 94 95-198 33-135 (183)
138 4dzr_A Protein-(glutamine-N5) 99.3 4E-13 1.4E-17 110.8 1.7 96 96-195 29-166 (215)
139 3mcz_A O-methyltransferase; ad 99.3 3.6E-12 1.2E-16 113.7 7.9 93 98-194 180-287 (352)
140 1yb2_A Hypothetical protein TA 99.3 5.2E-12 1.8E-16 109.0 8.4 149 95-277 108-269 (275)
141 3r0q_C Probable protein argini 99.3 4.1E-12 1.4E-16 114.6 7.4 105 84-193 48-168 (376)
142 2yxe_A Protein-L-isoaspartate 99.3 9.2E-12 3.1E-16 103.1 8.9 94 95-197 75-180 (215)
143 2fhp_A Methylase, putative; al 99.3 2.3E-12 8E-17 104.1 5.1 101 96-197 43-157 (187)
144 2nyu_A Putative ribosomal RNA 99.3 1.7E-11 5.9E-16 99.8 10.4 98 94-197 19-148 (196)
145 3gdh_A Trimethylguanosine synt 99.3 1E-13 3.4E-18 117.1 -3.2 93 97-193 78-180 (241)
146 3g89_A Ribosomal RNA small sub 99.3 4.7E-12 1.6E-16 107.8 7.2 93 96-195 79-185 (249)
147 2nxc_A L11 mtase, ribosomal pr 99.3 3.7E-12 1.3E-16 108.8 6.3 102 87-195 110-219 (254)
148 2pwy_A TRNA (adenine-N(1)-)-me 99.3 9.7E-12 3.3E-16 105.7 8.8 95 95-197 94-201 (258)
149 1jsx_A Glucose-inhibited divis 99.3 5E-12 1.7E-16 104.0 6.8 91 97-195 65-166 (207)
150 2esr_A Methyltransferase; stru 99.3 1.8E-12 6.1E-17 104.1 3.5 98 96-197 30-141 (177)
151 1dl5_A Protein-L-isoaspartate 99.3 3.9E-12 1.3E-16 112.1 5.9 93 95-196 73-177 (317)
152 4azs_A Methyltransferase WBDD; 99.3 8.4E-13 2.9E-17 125.3 1.8 101 89-192 58-171 (569)
153 1i1n_A Protein-L-isoaspartate 99.3 1.4E-11 4.9E-16 102.8 9.1 104 84-196 64-184 (226)
154 2fpo_A Methylase YHHF; structu 99.3 3.5E-12 1.2E-16 105.1 5.2 111 83-197 41-163 (202)
155 2ipx_A RRNA 2'-O-methyltransfe 99.3 5.8E-12 2E-16 105.8 6.7 98 95-195 75-183 (233)
156 4dcm_A Ribosomal RNA large sub 99.3 1.4E-11 4.8E-16 111.0 9.6 96 97-196 222-336 (375)
157 2oxt_A Nucleoside-2'-O-methylt 99.3 5E-12 1.7E-16 108.5 6.4 97 94-197 71-188 (265)
158 1i9g_A Hypothetical protein RV 99.3 1.2E-11 4.1E-16 106.6 8.8 95 95-197 97-206 (280)
159 3lpm_A Putative methyltransfer 99.3 5.4E-12 1.9E-16 107.9 6.3 97 97-196 49-178 (259)
160 3mb5_A SAM-dependent methyltra 99.3 6.3E-12 2.1E-16 106.9 6.7 94 95-197 91-197 (255)
161 2wa2_A Non-structural protein 99.3 3.1E-12 1.1E-16 110.5 4.7 97 94-197 79-196 (276)
162 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.7E-11 5.9E-16 103.9 9.1 97 95-198 47-177 (246)
163 2b25_A Hypothetical protein; s 99.2 4.8E-12 1.6E-16 112.3 5.7 100 94-201 102-226 (336)
164 3u81_A Catechol O-methyltransf 99.2 9E-12 3.1E-16 103.9 6.9 95 97-194 58-170 (221)
165 1u2z_A Histone-lysine N-methyl 99.2 9.6E-12 3.3E-16 113.5 7.5 97 95-193 240-358 (433)
166 2bm8_A Cephalosporin hydroxyla 99.2 2.3E-11 7.8E-16 102.7 9.2 93 97-195 81-188 (236)
167 2pbf_A Protein-L-isoaspartate 99.2 4.3E-12 1.5E-16 106.1 4.7 105 83-196 66-195 (227)
168 1r18_A Protein-L-isoaspartate( 99.2 1.1E-11 3.8E-16 103.7 7.2 104 83-196 70-196 (227)
169 2pjd_A Ribosomal RNA small sub 99.2 4.7E-12 1.6E-16 112.8 5.1 95 97-196 196-305 (343)
170 2ip2_A Probable phenazine-spec 99.2 6.5E-12 2.2E-16 111.2 5.9 90 99-194 169-272 (334)
171 3dou_A Ribosomal RNA large sub 99.2 6.1E-11 2.1E-15 96.8 10.9 105 86-196 12-141 (191)
172 3bzb_A Uncharacterized protein 99.2 2.8E-11 9.7E-16 104.7 9.1 100 96-195 78-206 (281)
173 1tw3_A COMT, carminomycin 4-O- 99.2 1.3E-11 4.5E-16 110.4 7.2 95 96-196 182-290 (360)
174 1o9g_A RRNA methyltransferase; 99.2 9.1E-12 3.1E-16 105.8 5.7 94 97-193 51-213 (250)
175 3bwc_A Spermidine synthase; SA 99.2 1.3E-11 4.4E-16 108.1 6.7 99 96-197 94-213 (304)
176 2y1w_A Histone-arginine methyl 99.2 1.3E-11 4.5E-16 110.1 6.8 94 96-194 49-155 (348)
177 3ntv_A MW1564 protein; rossman 99.2 1.9E-11 6.6E-16 102.7 7.4 92 97-193 71-175 (232)
178 1zg3_A Isoflavanone 4'-O-methy 99.2 4.8E-11 1.6E-15 106.8 9.7 92 96-194 192-293 (358)
179 2yvl_A TRMI protein, hypotheti 99.2 4.7E-11 1.6E-15 100.8 8.9 99 95-201 89-197 (248)
180 2gpy_A O-methyltransferase; st 99.2 2.2E-11 7.7E-16 102.2 6.8 92 97-193 54-159 (233)
181 3adn_A Spermidine synthase; am 99.2 4.4E-11 1.5E-15 104.2 8.9 100 95-196 81-200 (294)
182 2frn_A Hypothetical protein PH 99.2 2.3E-11 7.9E-16 105.2 7.0 99 90-196 118-227 (278)
183 1jg1_A PIMT;, protein-L-isoasp 99.2 2.5E-11 8.5E-16 102.1 6.9 93 95-198 89-193 (235)
184 1g8a_A Fibrillarin-like PRE-rR 99.2 4.7E-11 1.6E-15 99.7 8.3 98 95-195 71-179 (227)
185 2ozv_A Hypothetical protein AT 99.2 3.4E-11 1.1E-15 103.1 7.4 99 96-197 35-173 (260)
186 4hc4_A Protein arginine N-meth 99.1 7E-11 2.4E-15 106.0 8.4 91 97-192 83-187 (376)
187 2p41_A Type II methyltransfera 99.1 2.9E-11 9.9E-16 105.9 5.7 106 87-197 71-194 (305)
188 3tfw_A Putative O-methyltransf 99.1 1.2E-10 4.2E-15 98.8 9.3 93 97-194 63-170 (248)
189 3opn_A Putative hemolysin; str 99.1 5E-11 1.7E-15 100.4 6.4 93 97-194 37-137 (232)
190 1o54_A SAM-dependent O-methylt 99.1 6.2E-11 2.1E-15 102.2 6.9 94 95-197 110-216 (277)
191 3b3j_A Histone-arginine methyl 99.1 6.1E-11 2.1E-15 110.0 6.5 93 96-193 157-262 (480)
192 3c3p_A Methyltransferase; NP_9 99.1 7.2E-11 2.5E-15 97.5 6.3 91 97-193 56-159 (210)
193 4a6d_A Hydroxyindole O-methylt 99.1 4E-10 1.4E-14 100.7 10.7 92 97-194 179-283 (353)
194 2xyq_A Putative 2'-O-methyl tr 99.1 1.9E-10 6.3E-15 99.8 8.1 94 94-196 60-173 (290)
195 3tma_A Methyltransferase; thum 99.1 1.1E-10 3.8E-15 104.3 6.6 102 95-199 201-322 (354)
196 3dr5_A Putative O-methyltransf 99.1 1.2E-10 4.1E-15 97.3 6.2 91 98-193 57-162 (221)
197 3tr6_A O-methyltransferase; ce 99.1 7.4E-11 2.5E-15 98.3 4.7 93 97-194 64-174 (225)
198 1ixk_A Methyltransferase; open 99.1 1.5E-10 5.1E-15 101.9 6.9 98 95-195 116-247 (315)
199 3lcv_B Sisomicin-gentamicin re 99.1 1E-10 3.6E-15 98.7 5.6 101 91-196 126-237 (281)
200 3frh_A 16S rRNA methylase; met 99.1 1E-10 3.5E-15 97.8 5.4 95 96-195 104-206 (253)
201 2igt_A SAM dependent methyltra 99.1 5.3E-11 1.8E-15 105.5 3.9 98 96-196 152-274 (332)
202 1nv8_A HEMK protein; class I a 99.1 1.4E-10 4.8E-15 100.6 6.3 93 97-196 123-251 (284)
203 1xj5_A Spermidine synthase 1; 99.1 4.3E-10 1.5E-14 99.6 9.5 100 95-196 118-237 (334)
204 3a27_A TYW2, uncharacterized p 99.1 2.2E-10 7.7E-15 98.6 7.5 96 92-195 114-220 (272)
205 2cmg_A Spermidine synthase; tr 99.1 8E-10 2.7E-14 94.6 10.5 90 96-197 71-174 (262)
206 3duw_A OMT, O-methyltransferas 99.1 3.9E-10 1.3E-14 93.8 8.3 95 97-194 58-167 (223)
207 2hnk_A SAM-dependent O-methylt 99.0 2.5E-10 8.4E-15 96.2 7.0 95 97-194 60-181 (239)
208 3r3h_A O-methyltransferase, SA 99.0 8.8E-11 3E-15 99.5 4.2 92 97-193 60-169 (242)
209 1uir_A Polyamine aminopropyltr 99.0 3.3E-10 1.1E-14 99.6 7.8 100 95-196 75-197 (314)
210 2i7c_A Spermidine synthase; tr 99.0 2.6E-10 8.8E-15 98.8 6.4 101 95-197 76-195 (283)
211 3gjy_A Spermidine synthase; AP 99.0 5E-10 1.7E-14 98.1 8.0 95 99-196 91-202 (317)
212 2pt6_A Spermidine synthase; tr 99.0 5.8E-10 2E-14 98.3 8.5 101 95-197 114-233 (321)
213 1ne2_A Hypothetical protein TA 99.0 9.9E-10 3.4E-14 89.8 9.3 90 95-193 49-145 (200)
214 1iy9_A Spermidine synthase; ro 99.0 4.8E-10 1.6E-14 96.7 7.6 100 96-197 74-192 (275)
215 1inl_A Spermidine synthase; be 99.0 4.9E-10 1.7E-14 97.7 7.7 100 96-197 89-208 (296)
216 2b2c_A Spermidine synthase; be 99.0 2.8E-10 9.6E-15 100.0 5.7 100 95-196 106-224 (314)
217 3ajd_A Putative methyltransfer 99.0 3.4E-10 1.2E-14 97.5 6.1 98 95-195 81-212 (274)
218 1sui_A Caffeoyl-COA O-methyltr 99.0 4.4E-10 1.5E-14 95.4 6.3 93 97-194 79-190 (247)
219 3cbg_A O-methyltransferase; cy 99.0 5.6E-10 1.9E-14 93.7 6.8 95 97-194 72-182 (232)
220 2o07_A Spermidine synthase; st 99.0 1.1E-09 3.9E-14 95.7 8.6 99 96-196 94-211 (304)
221 2h00_A Methyltransferase 10 do 99.0 2.1E-10 7.3E-15 97.4 3.3 96 97-193 65-191 (254)
222 2yxl_A PH0851 protein, 450AA l 99.0 1.6E-09 5.3E-14 99.9 9.0 98 95-195 257-390 (450)
223 3lec_A NADB-rossmann superfami 98.9 7.4E-10 2.5E-14 92.6 5.9 100 90-194 14-125 (230)
224 1mjf_A Spermidine synthase; sp 98.9 2E-09 6.8E-14 93.1 8.8 99 95-196 73-195 (281)
225 2avd_A Catechol-O-methyltransf 98.9 9.8E-10 3.3E-14 91.6 5.9 96 96-194 68-179 (229)
226 4dmg_A Putative uncharacterize 98.9 8.9E-10 3E-14 99.7 6.0 105 90-196 207-328 (393)
227 2qm3_A Predicted methyltransfe 98.9 3.9E-09 1.3E-13 94.9 9.6 95 97-196 172-280 (373)
228 3tm4_A TRNA (guanine N2-)-meth 98.9 2.4E-09 8.4E-14 96.3 8.1 108 82-197 205-332 (373)
229 3gnl_A Uncharacterized protein 98.9 1.4E-09 4.9E-14 91.6 6.1 100 90-194 14-125 (244)
230 3kr9_A SAM-dependent methyltra 98.9 2.1E-09 7.2E-14 89.6 6.9 100 90-194 8-119 (225)
231 1zq9_A Probable dimethyladenos 98.9 6.9E-10 2.4E-14 96.2 4.0 92 95-191 26-144 (285)
232 1sqg_A SUN protein, FMU protei 98.9 1.6E-09 5.5E-14 99.2 6.5 98 95-195 244-375 (429)
233 3c3y_A Pfomt, O-methyltransfer 98.9 1.5E-09 5E-14 91.5 5.4 93 97-194 70-181 (237)
234 2b78_A Hypothetical protein SM 98.9 9.2E-10 3.2E-14 99.4 4.0 102 96-197 211-334 (385)
235 2f8l_A Hypothetical protein LM 98.9 3E-09 1E-13 94.6 6.9 97 97-197 130-259 (344)
236 2ih2_A Modification methylase 98.9 6.3E-09 2.2E-13 94.7 9.1 96 97-197 39-167 (421)
237 2as0_A Hypothetical protein PH 98.9 1.4E-09 4.7E-14 98.7 4.5 104 91-197 211-338 (396)
238 1yub_A Ermam, rRNA methyltrans 98.8 6.3E-11 2.2E-15 100.5 -4.4 95 95-193 27-144 (245)
239 1wy7_A Hypothetical protein PH 98.8 2.5E-08 8.4E-13 81.7 11.1 106 83-196 34-151 (207)
240 2frx_A Hypothetical protein YE 98.8 5.1E-09 1.7E-13 97.0 7.6 96 97-195 117-247 (479)
241 3v97_A Ribosomal RNA large sub 98.8 1.4E-09 4.9E-14 105.3 4.0 99 96-196 538-659 (703)
242 3m6w_A RRNA methylase; rRNA me 98.8 1.5E-09 5E-14 100.0 3.3 98 95-195 99-230 (464)
243 1wxx_A TT1595, hypothetical pr 98.8 1.1E-09 3.8E-14 98.8 1.6 98 97-197 209-328 (382)
244 2yx1_A Hypothetical protein MJ 98.7 1.3E-08 4.3E-13 90.3 7.2 96 90-195 188-292 (336)
245 3c0k_A UPF0064 protein YCCW; P 98.7 7E-09 2.4E-13 94.0 5.6 102 96-197 219-342 (396)
246 3k6r_A Putative transferase PH 98.7 1.4E-08 4.7E-13 87.4 6.5 97 89-193 117-224 (278)
247 3b5i_A S-adenosyl-L-methionine 98.7 7.5E-08 2.6E-12 86.2 9.7 100 98-197 53-228 (374)
248 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.3E-08 4.3E-13 93.6 3.9 98 95-195 103-235 (456)
249 2okc_A Type I restriction enzy 98.6 2.3E-08 7.8E-13 92.0 5.2 97 97-197 171-310 (445)
250 2jjq_A Uncharacterized RNA met 98.6 8.6E-08 2.9E-12 87.5 8.8 100 86-194 280-387 (425)
251 2h1r_A Dimethyladenosine trans 98.6 1.3E-07 4.5E-12 82.3 9.0 100 82-188 29-153 (299)
252 1qam_A ERMC' methyltransferase 98.6 4.8E-09 1.6E-13 88.8 -0.4 91 96-190 29-142 (244)
253 3evf_A RNA-directed RNA polyme 98.5 2E-07 6.8E-12 79.1 8.0 109 84-196 60-186 (277)
254 2efj_A 3,7-dimethylxanthine me 98.5 1.8E-07 6.1E-12 83.8 6.7 101 98-198 53-229 (384)
255 1uwv_A 23S rRNA (uracil-5-)-me 98.5 6.1E-07 2.1E-11 82.2 10.1 95 96-194 285-389 (433)
256 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1.2E-06 4.3E-11 76.5 10.5 97 95-195 100-235 (309)
257 3gru_A Dimethyladenosine trans 98.4 7E-07 2.4E-11 77.5 7.6 81 82-167 37-124 (295)
258 3ldu_A Putative methylase; str 98.4 4.1E-07 1.4E-11 82.0 6.0 79 119-201 258-351 (385)
259 2qfm_A Spermine synthase; sper 98.4 2.2E-07 7.4E-12 82.4 4.0 99 97-197 188-317 (364)
260 3k0b_A Predicted N6-adenine-sp 98.3 9.9E-07 3.4E-11 79.7 8.1 78 119-200 264-356 (393)
261 3bt7_A TRNA (uracil-5-)-methyl 98.3 9E-07 3.1E-11 79.3 7.7 110 85-202 200-334 (369)
262 1m6e_X S-adenosyl-L-methionnin 98.3 3.4E-07 1.2E-11 81.4 4.5 100 97-197 51-212 (359)
263 3ldg_A Putative uncharacterize 98.3 1.5E-06 5.3E-11 78.1 8.6 78 119-200 257-349 (384)
264 3gcz_A Polyprotein; flavivirus 98.3 1.8E-06 6E-11 73.5 7.5 112 83-196 75-203 (282)
265 2ar0_A M.ecoki, type I restric 98.2 4.5E-07 1.6E-11 85.2 2.9 98 97-197 169-315 (541)
266 3tqs_A Ribosomal RNA small sub 98.2 2.1E-06 7.3E-11 72.9 6.8 77 82-164 16-103 (255)
267 3lkd_A Type I restriction-modi 98.1 1.3E-05 4.4E-10 75.3 11.2 116 82-198 204-362 (542)
268 3fut_A Dimethyladenosine trans 98.1 3.1E-06 1E-10 72.5 5.5 80 81-166 33-119 (271)
269 3s1s_A Restriction endonucleas 98.1 9.4E-06 3.2E-10 78.5 8.7 101 96-199 320-470 (878)
270 2dul_A N(2),N(2)-dimethylguano 98.0 4.4E-06 1.5E-10 75.0 5.3 93 97-195 47-165 (378)
271 3cvo_A Methyltransferase-like 98.0 1.8E-05 6.2E-10 64.6 8.3 92 97-193 30-153 (202)
272 1qyr_A KSGA, high level kasuga 98.0 2.8E-06 9.7E-11 72.0 3.5 78 82-165 8-98 (252)
273 3khk_A Type I restriction-modi 98.0 8.7E-06 3E-10 76.5 7.0 99 98-198 245-399 (544)
274 3eld_A Methyltransferase; flav 98.0 2.8E-05 9.6E-10 66.5 9.2 109 86-196 69-193 (300)
275 2r6z_A UPF0341 protein in RSP 98.0 2.5E-06 8.6E-11 72.6 2.5 95 97-196 83-218 (258)
276 3v97_A Ribosomal RNA large sub 98.0 5.5E-06 1.9E-10 80.2 5.1 80 119-201 257-354 (703)
277 3ftd_A Dimethyladenosine trans 97.9 6.7E-05 2.3E-09 63.4 10.9 117 95-223 29-153 (249)
278 3axs_A Probable N(2),N(2)-dime 97.9 5.5E-06 1.9E-10 74.6 4.1 93 97-195 52-159 (392)
279 2k4m_A TR8_protein, UPF0146 pr 97.9 9.9E-06 3.4E-10 62.1 4.8 97 83-194 21-121 (153)
280 3o4f_A Spermidine synthase; am 97.9 5.9E-05 2E-09 65.0 9.6 101 95-197 81-201 (294)
281 4gqb_A Protein arginine N-meth 97.8 3.8E-05 1.3E-09 72.9 8.1 88 99-191 359-464 (637)
282 3uzu_A Ribosomal RNA small sub 97.8 1.1E-05 3.9E-10 69.3 4.1 67 82-153 29-104 (279)
283 3ua3_A Protein arginine N-meth 97.8 1.2E-05 4E-10 76.7 4.5 91 98-191 410-531 (745)
284 1m6y_A S-adenosyl-methyltransf 97.8 9.2E-06 3.1E-10 70.6 2.9 68 95-165 24-106 (301)
285 3ll7_A Putative methyltransfer 97.6 1.3E-05 4.5E-10 72.4 1.4 68 94-164 90-170 (410)
286 3lkz_A Non-structural protein 97.6 0.00023 8E-09 60.7 8.1 106 86-197 82-207 (321)
287 2px2_A Genome polyprotein [con 97.5 0.00022 7.6E-09 59.7 7.2 106 86-197 61-186 (269)
288 4auk_A Ribosomal RNA large sub 97.5 0.00063 2.2E-08 60.3 10.0 85 94-187 208-296 (375)
289 3p8z_A Mtase, non-structural p 97.4 0.00081 2.8E-08 55.6 9.1 107 86-199 66-191 (267)
290 2oyr_A UPF0341 protein YHIQ; a 97.4 3.2E-05 1.1E-09 65.7 0.4 90 96-188 85-194 (258)
291 2qy6_A UPF0209 protein YFCK; s 97.3 0.0001 3.5E-09 62.5 3.0 36 157-192 173-211 (257)
292 3r24_A NSP16, 2'-O-methyl tran 97.3 0.00039 1.3E-08 59.3 6.0 105 85-197 94-220 (344)
293 2vz8_A Fatty acid synthase; tr 97.1 0.00023 7.9E-09 77.6 3.2 96 97-194 1240-1348(2512)
294 3ufb_A Type I restriction-modi 97.0 0.0013 4.5E-08 61.5 7.4 98 97-197 217-365 (530)
295 4fzv_A Putative methyltransfer 96.8 0.00047 1.6E-08 61.2 2.8 101 94-195 145-285 (359)
296 3c6k_A Spermine synthase; sper 96.7 0.0016 5.5E-08 57.9 5.2 98 97-194 205-331 (381)
297 2wk1_A NOVP; transferase, O-me 96.6 0.0064 2.2E-07 52.0 8.3 94 97-194 106-244 (282)
298 2zig_A TTHA0409, putative modi 96.5 0.0028 9.4E-08 54.7 5.0 42 94-135 232-274 (297)
299 1wg8_A Predicted S-adenosylmet 96.2 0.0047 1.6E-07 52.6 4.8 68 95-165 20-97 (285)
300 1pqw_A Polyketide synthase; ro 95.9 0.012 4E-07 47.2 5.7 93 94-193 35-136 (198)
301 2dph_A Formaldehyde dismutase; 95.5 0.067 2.3E-06 47.8 9.5 98 94-193 182-298 (398)
302 1kol_A Formaldehyde dehydrogen 95.4 0.081 2.8E-06 47.2 9.7 100 93-193 181-299 (398)
303 1v3u_A Leukotriene B4 12- hydr 94.6 0.035 1.2E-06 48.2 5.1 93 94-193 142-243 (333)
304 1f8f_A Benzyl alcohol dehydrog 94.3 0.035 1.2E-06 49.1 4.4 94 94-193 187-288 (371)
305 1g60_A Adenine-specific methyl 94.2 0.068 2.3E-06 44.9 5.8 46 90-135 205-251 (260)
306 4ej6_A Putative zinc-binding d 93.9 0.23 7.8E-06 43.9 8.8 95 93-193 178-283 (370)
307 4b7c_A Probable oxidoreductase 93.9 0.071 2.4E-06 46.3 5.4 92 94-193 146-247 (336)
308 2j3h_A NADP-dependent oxidored 93.8 0.11 3.9E-06 45.2 6.5 93 94-193 152-254 (345)
309 4dvj_A Putative zinc-dependent 93.6 0.2 6.9E-06 44.1 7.8 91 97-193 171-269 (363)
310 1rjw_A ADH-HT, alcohol dehydro 93.5 0.18 6.3E-06 43.8 7.5 92 94-193 161-260 (339)
311 1yb5_A Quinone oxidoreductase; 93.5 0.14 4.9E-06 44.8 6.6 93 94-193 167-268 (351)
312 1e3j_A NADP(H)-dependent ketos 93.2 0.34 1.2E-05 42.3 8.7 94 94-193 165-270 (352)
313 1pl8_A Human sorbitol dehydrog 93.0 0.54 1.8E-05 41.1 9.7 94 94-193 168-272 (356)
314 3two_A Mannitol dehydrogenase; 93.0 0.16 5.5E-06 44.3 6.2 88 94-193 173-264 (348)
315 2zig_A TTHA0409, putative modi 92.9 0.053 1.8E-06 46.5 2.9 44 153-196 36-99 (297)
316 1uuf_A YAHK, zinc-type alcohol 92.8 0.12 4E-06 45.8 5.1 91 94-193 191-287 (369)
317 2uyo_A Hypothetical protein ML 92.8 0.67 2.3E-05 40.0 9.8 98 99-197 104-221 (310)
318 3qwb_A Probable quinone oxidor 92.7 0.12 4.1E-06 44.8 5.0 92 94-193 145-246 (334)
319 3s2e_A Zinc-containing alcohol 92.7 0.19 6.5E-06 43.7 6.3 93 94-193 163-262 (340)
320 3jv7_A ADH-A; dehydrogenase, n 92.6 0.12 4.1E-06 45.0 4.9 94 94-193 168-269 (345)
321 2hcy_A Alcohol dehydrogenase 1 92.6 0.11 3.9E-06 45.3 4.7 94 94-193 166-268 (347)
322 3fpc_A NADP-dependent alcohol 92.3 0.12 4E-06 45.3 4.4 95 93-193 162-265 (352)
323 3jyn_A Quinone oxidoreductase; 92.2 0.063 2.1E-06 46.5 2.4 92 94-193 137-238 (325)
324 3gms_A Putative NADPH:quinone 92.2 0.064 2.2E-06 46.8 2.5 92 94-193 141-242 (340)
325 2dq4_A L-threonine 3-dehydroge 92.1 0.2 7E-06 43.6 5.7 91 94-193 162-261 (343)
326 2c0c_A Zinc binding alcohol de 92.0 0.15 5.1E-06 44.9 4.7 93 94-193 160-260 (362)
327 4eez_A Alcohol dehydrogenase 1 92.0 0.55 1.9E-05 40.7 8.4 94 94-193 160-262 (348)
328 3uko_A Alcohol dehydrogenase c 91.9 0.19 6.6E-06 44.4 5.3 94 94-193 190-294 (378)
329 1jvb_A NAD(H)-dependent alcoho 91.8 0.22 7.6E-06 43.4 5.6 94 93-193 166-270 (347)
330 3uog_A Alcohol dehydrogenase; 91.7 0.1 3.4E-06 46.0 3.3 92 94-193 186-286 (363)
331 3nx4_A Putative oxidoreductase 91.6 0.32 1.1E-05 41.9 6.3 87 100-193 149-240 (324)
332 1cdo_A Alcohol dehydrogenase; 91.5 0.29 9.9E-06 43.1 6.0 94 94-193 189-293 (374)
333 1p0f_A NADP-dependent alcohol 91.4 0.28 9.7E-06 43.2 5.8 94 94-193 188-292 (373)
334 2j8z_A Quinone oxidoreductase; 91.4 0.2 6.8E-06 43.9 4.8 93 94-193 159-260 (354)
335 2eih_A Alcohol dehydrogenase; 91.4 0.096 3.3E-06 45.7 2.7 93 94-193 163-264 (343)
336 3fbg_A Putative arginate lyase 91.2 0.29 9.8E-06 42.7 5.7 91 97-193 150-247 (346)
337 2jhf_A Alcohol dehydrogenase E 91.0 0.34 1.2E-05 42.6 6.0 94 94-193 188-292 (374)
338 3ip1_A Alcohol dehydrogenase, 90.9 0.58 2E-05 41.7 7.5 93 95-193 211-317 (404)
339 1e3i_A Alcohol dehydrogenase, 90.8 0.36 1.2E-05 42.5 5.9 94 94-193 192-296 (376)
340 1qor_A Quinone oxidoreductase; 90.6 0.18 6.1E-06 43.6 3.7 93 94-193 137-238 (327)
341 4a2c_A Galactitol-1-phosphate 90.5 0.84 2.9E-05 39.5 8.0 94 93-193 156-259 (346)
342 1boo_A Protein (N-4 cytosine-s 90.5 0.14 4.8E-06 44.4 2.9 45 153-197 29-87 (323)
343 1piw_A Hypothetical zinc-type 90.4 0.11 3.8E-06 45.7 2.2 95 93-193 175-275 (360)
344 2h6e_A ADH-4, D-arabinose 1-de 90.3 0.21 7.3E-06 43.5 3.9 92 94-193 168-268 (344)
345 2zb4_A Prostaglandin reductase 90.2 0.26 9E-06 43.1 4.5 93 94-193 155-259 (357)
346 4dup_A Quinone oxidoreductase; 90.2 0.15 5E-06 44.8 2.8 92 94-193 164-264 (353)
347 3krt_A Crotonyl COA reductase; 90.1 0.49 1.7E-05 43.0 6.3 92 94-193 225-343 (456)
348 2b5w_A Glucose dehydrogenase; 90.1 0.64 2.2E-05 40.6 6.9 91 94-193 163-272 (357)
349 3goh_A Alcohol dehydrogenase, 90.0 0.11 3.6E-06 44.8 1.8 85 94-193 139-228 (315)
350 2fzw_A Alcohol dehydrogenase c 90.0 0.35 1.2E-05 42.6 5.1 94 94-193 187-291 (373)
351 1wly_A CAAR, 2-haloacrylate re 90.0 0.18 6E-06 43.7 3.2 93 94-193 142-243 (333)
352 4eye_A Probable oxidoreductase 89.9 0.13 4.6E-06 44.8 2.3 93 94-193 156-256 (342)
353 1iz0_A Quinone oxidoreductase; 89.8 0.13 4.5E-06 43.9 2.1 87 95-193 123-217 (302)
354 2d8a_A PH0655, probable L-thre 89.6 0.46 1.6E-05 41.4 5.5 90 97-193 167-266 (348)
355 3fwz_A Inner membrane protein 89.5 0.76 2.6E-05 34.2 6.0 96 98-198 7-109 (140)
356 1xa0_A Putative NADPH dependen 89.3 0.31 1.1E-05 42.0 4.2 93 94-193 145-245 (328)
357 3tka_A Ribosomal RNA small sub 89.3 0.36 1.2E-05 42.1 4.5 41 95-135 55-99 (347)
358 1vj0_A Alcohol dehydrogenase, 89.3 0.32 1.1E-05 43.1 4.3 93 95-193 193-297 (380)
359 3vyw_A MNMC2; tRNA wobble urid 88.8 0.26 8.8E-06 42.5 3.2 38 153-191 182-223 (308)
360 1yqd_A Sinapyl alcohol dehydro 88.5 0.67 2.3E-05 40.7 5.9 94 94-193 183-281 (366)
361 2cf5_A Atccad5, CAD, cinnamyl 88.1 0.43 1.5E-05 41.8 4.3 92 94-193 176-274 (357)
362 4a0s_A Octenoyl-COA reductase/ 88.1 0.67 2.3E-05 41.8 5.7 92 94-193 217-335 (447)
363 3tqh_A Quinone oxidoreductase; 87.8 1 3.6E-05 38.6 6.6 92 93-193 148-244 (321)
364 2g1u_A Hypothetical protein TM 87.8 2 6.9E-05 32.4 7.5 99 97-198 18-122 (155)
365 1tt7_A YHFP; alcohol dehydroge 87.7 0.32 1.1E-05 42.0 3.2 93 94-193 146-246 (330)
366 1rjd_A PPM1P, carboxy methyl t 87.5 2.3 7.8E-05 37.0 8.5 96 97-195 97-234 (334)
367 2vn8_A Reticulon-4-interacting 87.0 0.51 1.7E-05 41.6 4.1 92 95-193 181-279 (375)
368 3m6i_A L-arabinitol 4-dehydrog 86.5 0.64 2.2E-05 40.7 4.4 95 93-193 175-282 (363)
369 1i4w_A Mitochondrial replicati 86.0 1.3 4.5E-05 38.8 6.2 53 80-132 37-96 (353)
370 3c85_A Putative glutathione-re 85.5 1.5 5E-05 34.1 5.8 95 98-197 39-142 (183)
371 3tos_A CALS11; methyltransfera 85.5 0.52 1.8E-05 39.5 3.2 40 154-195 179-218 (257)
372 1eg2_A Modification methylase 85.3 0.48 1.6E-05 41.0 3.0 43 154-196 55-108 (319)
373 1boo_A Protein (N-4 cytosine-s 85.2 0.84 2.9E-05 39.5 4.5 45 91-135 246-291 (323)
374 3abi_A Putative uncharacterize 84.0 0.44 1.5E-05 41.9 2.2 69 97-165 15-85 (365)
375 3llv_A Exopolyphosphatase-rela 83.4 1.9 6.6E-05 31.8 5.3 95 98-198 6-107 (141)
376 3gaz_A Alcohol dehydrogenase s 83.4 1 3.4E-05 39.2 4.2 89 94-193 147-245 (343)
377 3l9w_A Glutathione-regulated p 82.7 2.4 8.1E-05 38.0 6.5 97 97-198 3-106 (413)
378 3ggo_A Prephenate dehydrogenas 81.2 2.8 9.6E-05 36.0 6.2 85 99-191 34-125 (314)
379 2cdc_A Glucose dehydrogenase g 81.1 1.9 6.4E-05 37.7 5.1 88 98-193 181-277 (366)
380 2km1_A Protein DRE2; yeast, an 80.9 0.93 3.2E-05 34.0 2.6 43 150-192 52-96 (136)
381 2eez_A Alanine dehydrogenase; 79.8 0.32 1.1E-05 43.0 -0.4 96 97-192 165-264 (369)
382 1lss_A TRK system potassium up 79.5 4.1 0.00014 29.5 5.9 95 98-196 4-104 (140)
383 4e21_A 6-phosphogluconate dehy 79.1 1.5 5.2E-05 38.5 3.8 89 97-191 21-112 (358)
384 3pi7_A NADH oxidoreductase; gr 78.9 0.93 3.2E-05 39.4 2.4 89 97-193 163-262 (349)
385 1g60_A Adenine-specific methyl 78.7 1 3.5E-05 37.5 2.5 21 174-194 54-74 (260)
386 2f1k_A Prephenate dehydrogenas 78.6 4.3 0.00015 33.7 6.4 84 100-194 2-90 (279)
387 3ce6_A Adenosylhomocysteinase; 76.8 2.6 8.7E-05 38.8 4.7 87 95-193 271-360 (494)
388 2vhw_A Alanine dehydrogenase; 76.1 0.37 1.3E-05 42.7 -1.0 96 97-193 167-267 (377)
389 3gqv_A Enoyl reductase; medium 75.5 3.7 0.00013 35.9 5.3 90 96-193 163-262 (371)
390 1eg2_A Modification methylase 75.5 2.7 9.1E-05 36.3 4.3 47 89-135 234-284 (319)
391 4a27_A Synaptic vesicle membra 75.0 1.8 6.1E-05 37.6 3.1 91 94-193 139-237 (349)
392 1ej6_A Lambda2; icosahedral, n 74.7 5.5 0.00019 39.8 6.5 97 95-194 819-926 (1289)
393 2py6_A Methyltransferase FKBM; 73.7 3.7 0.00013 36.6 4.9 37 96-132 225-266 (409)
394 2hmt_A YUAA protein; RCK, KTN, 73.5 10 0.00034 27.4 6.6 97 98-197 6-107 (144)
395 2ew2_A 2-dehydropantoate 2-red 73.1 7.8 0.00027 32.5 6.7 93 99-196 4-109 (316)
396 3c24_A Putative oxidoreductase 72.9 6 0.00021 33.1 5.8 86 99-195 12-101 (286)
397 2oo3_A Protein involved in cat 72.6 4.8 0.00016 34.1 5.0 108 86-195 82-199 (283)
398 1h2b_A Alcohol dehydrogenase; 71.4 6.4 0.00022 34.2 5.8 93 93-193 182-284 (359)
399 2g5c_A Prephenate dehydrogenas 71.2 6.7 0.00023 32.6 5.7 84 100-192 3-94 (281)
400 3trk_A Nonstructural polyprote 69.9 1.4 4.8E-05 36.9 1.1 38 156-193 210-258 (324)
401 3iyl_W VP1; non-enveloped viru 69.5 5.2 0.00018 40.2 5.1 94 98-193 828-932 (1299)
402 2aef_A Calcium-gated potassium 68.1 8.5 0.00029 31.0 5.6 98 97-200 8-111 (234)
403 1id1_A Putative potassium chan 66.6 11 0.00037 28.0 5.6 99 98-199 3-110 (153)
404 2rir_A Dipicolinate synthase, 65.0 6.7 0.00023 33.2 4.5 87 97-193 156-245 (300)
405 3g7u_A Cytosine-specific methy 64.7 9.2 0.00032 33.7 5.4 67 99-165 3-79 (376)
406 3g0o_A 3-hydroxyisobutyrate de 64.5 6.6 0.00022 33.2 4.3 36 98-133 7-45 (303)
407 2hwk_A Helicase NSP2; rossman 64.4 3.4 0.00012 35.0 2.3 40 156-195 205-255 (320)
408 1g55_A DNA cytosine methyltran 63.8 1.9 6.3E-05 37.6 0.7 65 98-165 2-76 (343)
409 1bg6_A N-(1-D-carboxylethyl)-L 63.4 6.2 0.00021 34.0 4.0 92 99-193 5-108 (359)
410 3d1l_A Putative NADP oxidoredu 62.6 7.5 0.00026 32.0 4.3 87 98-194 10-101 (266)
411 3ius_A Uncharacterized conserv 62.4 24 0.00083 28.8 7.5 68 99-171 6-77 (286)
412 3gvp_A Adenosylhomocysteinase 61.3 9.2 0.00031 34.4 4.8 86 96-193 218-306 (435)
413 3d4o_A Dipicolinate synthase s 60.4 7.1 0.00024 32.9 3.8 87 97-193 154-243 (293)
414 3l4b_C TRKA K+ channel protien 60.3 11 0.00037 30.0 4.7 96 99-199 1-104 (218)
415 4dll_A 2-hydroxy-3-oxopropiona 60.0 12 0.0004 32.0 5.1 37 97-133 30-69 (320)
416 3pvc_A TRNA 5-methylaminomethy 59.9 7 0.00024 37.3 4.0 38 155-192 169-209 (689)
417 3ew7_A LMO0794 protein; Q8Y8U8 59.3 18 0.00062 28.2 5.9 93 99-193 1-101 (221)
418 4gua_A Non-structural polyprot 58.7 4.6 0.00016 37.5 2.3 43 150-193 215-268 (670)
419 3p2y_A Alanine dehydrogenase/p 58.5 1.2 4E-05 39.6 -1.6 95 97-191 183-299 (381)
420 3e8x_A Putative NAD-dependent 58.3 10 0.00036 30.3 4.3 76 97-174 20-101 (236)
421 1zsy_A Mitochondrial 2-enoyl t 58.1 17 0.00058 31.3 5.9 92 94-193 164-269 (357)
422 3ojo_A CAP5O; rossmann fold, c 57.5 45 0.0015 29.9 8.7 37 97-133 10-49 (431)
423 2h78_A Hibadh, 3-hydroxyisobut 56.7 6.8 0.00023 32.9 3.0 35 99-133 4-41 (302)
424 3qha_A Putative oxidoreductase 56.6 5.1 0.00017 33.8 2.2 82 99-192 16-103 (296)
425 4gbj_A 6-phosphogluconate dehy 56.5 11 0.00037 32.0 4.2 81 100-191 7-94 (297)
426 3iht_A S-adenosyl-L-methionine 56.2 21 0.00073 27.4 5.2 95 97-193 40-146 (174)
427 1l7d_A Nicotinamide nucleotide 55.5 2.1 7.3E-05 37.8 -0.4 35 97-131 171-208 (384)
428 1gu7_A Enoyl-[acyl-carrier-pro 55.1 8.7 0.0003 33.2 3.5 93 94-193 163-274 (364)
429 3ic5_A Putative saccharopine d 55.1 4.3 0.00015 28.3 1.3 69 98-166 5-78 (118)
430 4f3n_A Uncharacterized ACR, CO 54.9 10 0.00034 34.2 3.9 33 98-130 138-178 (432)
431 3dqp_A Oxidoreductase YLBE; al 54.3 13 0.00046 29.2 4.3 69 99-168 1-74 (219)
432 1pjc_A Protein (L-alanine dehy 54.2 1.3 4.5E-05 38.8 -2.0 95 98-193 167-266 (361)
433 1dlj_A UDP-glucose dehydrogena 53.8 13 0.00044 32.9 4.5 90 100-192 2-115 (402)
434 3slk_A Polyketide synthase ext 53.8 11 0.00039 36.6 4.4 89 95-193 343-441 (795)
435 3gg2_A Sugar dehydrogenase, UD 53.6 13 0.00044 33.6 4.5 34 99-132 3-39 (450)
436 1x13_A NAD(P) transhydrogenase 53.5 2.6 9E-05 37.5 -0.1 37 97-133 171-210 (401)
437 1vpd_A Tartronate semialdehyde 53.3 6.1 0.00021 33.1 2.2 84 99-191 6-96 (299)
438 4dio_A NAD(P) transhydrogenase 52.9 6.1 0.00021 35.3 2.1 38 97-134 189-229 (405)
439 2y0c_A BCEC, UDP-glucose dehyd 52.5 10 0.00034 34.6 3.6 37 97-133 7-46 (478)
440 3h2s_A Putative NADH-flavin re 52.3 31 0.0011 26.9 6.2 93 99-193 1-103 (224)
441 3ubt_Y Modification methylase 52.2 11 0.00038 32.0 3.7 64 99-164 1-68 (331)
442 1mv8_A GMD, GDP-mannose 6-dehy 52.1 19 0.00065 32.1 5.3 34 100-133 2-38 (436)
443 3dmg_A Probable ribosomal RNA 51.0 65 0.0022 28.2 8.5 94 97-197 45-142 (381)
444 3ps9_A TRNA 5-methylaminomethy 50.7 8.2 0.00028 36.7 2.8 37 155-192 177-217 (676)
445 3ond_A Adenosylhomocysteinase; 49.8 26 0.0009 31.9 5.9 84 97-192 264-350 (488)
446 3gpi_A NAD-dependent epimerase 48.4 52 0.0018 26.8 7.3 67 98-167 3-73 (286)
447 3n58_A Adenosylhomocysteinase; 48.1 17 0.00059 32.9 4.3 86 96-193 245-333 (464)
448 3pef_A 6-phosphogluconate dehy 48.1 5.2 0.00018 33.5 0.9 34 99-132 2-38 (287)
449 1lnq_A MTHK channels, potassiu 47.9 56 0.0019 27.6 7.6 96 98-200 115-217 (336)
450 4ezb_A Uncharacterized conserv 46.9 21 0.00071 30.4 4.5 82 99-191 25-118 (317)
451 4fgs_A Probable dehydrogenase 46.8 11 0.00038 31.5 2.7 97 97-193 28-158 (273)
452 4eso_A Putative oxidoreductase 46.4 8.5 0.00029 31.5 1.9 97 97-193 7-137 (255)
453 3pxx_A Carveol dehydrogenase; 46.0 32 0.0011 28.2 5.6 97 97-193 9-152 (287)
454 2c7p_A Modification methylase 46.0 19 0.00065 30.9 4.2 64 98-164 11-78 (327)
455 1zkd_A DUF185; NESG, RPR58, st 45.8 23 0.00079 31.3 4.7 35 98-132 81-125 (387)
456 3gt0_A Pyrroline-5-carboxylate 45.6 5.1 0.00018 32.7 0.4 84 99-191 3-94 (247)
457 1txg_A Glycerol-3-phosphate de 44.8 19 0.00063 30.5 3.9 85 100-191 2-101 (335)
458 1zcj_A Peroxisomal bifunctiona 44.8 39 0.0013 30.5 6.2 88 99-193 38-149 (463)
459 3cky_A 2-hydroxymethyl glutara 44.7 16 0.00055 30.4 3.5 84 98-191 4-95 (301)
460 1v8b_A Adenosylhomocysteinase; 44.2 26 0.00088 31.9 4.9 84 97-192 256-342 (479)
461 3b1f_A Putative prephenate deh 44.0 50 0.0017 27.2 6.5 84 99-191 7-98 (290)
462 4e2x_A TCAB9; kijanose, tetron 43.9 32 0.0011 30.2 5.5 93 96-197 317-413 (416)
463 3ioy_A Short-chain dehydrogena 43.7 20 0.00068 30.4 3.9 72 97-168 7-98 (319)
464 2gdz_A NAD+-dependent 15-hydro 43.7 18 0.00063 29.5 3.6 79 97-175 6-104 (267)
465 1wg8_A Predicted S-adenosylmet 43.1 12 0.0004 31.7 2.3 25 172-196 211-235 (285)
466 3ktd_A Prephenate dehydrogenas 42.9 5.8 0.0002 34.5 0.3 90 98-194 8-100 (341)
467 3pid_A UDP-glucose 6-dehydroge 42.8 36 0.0012 30.5 5.6 36 98-133 36-73 (432)
468 3hwr_A 2-dehydropantoate 2-red 41.7 50 0.0017 27.9 6.2 95 97-197 18-122 (318)
469 2raf_A Putative dinucleotide-b 41.7 28 0.00096 27.5 4.3 71 97-196 18-91 (209)
470 3ijr_A Oxidoreductase, short c 41.3 33 0.0011 28.5 4.9 97 97-193 46-181 (291)
471 3g79_A NDP-N-acetyl-D-galactos 40.8 40 0.0014 30.7 5.6 33 97-129 17-54 (478)
472 3tka_A Ribosomal RNA small sub 40.7 13 0.00045 32.3 2.3 25 172-196 252-276 (347)
473 3doj_A AT3G25530, dehydrogenas 40.4 9.7 0.00033 32.3 1.4 35 98-132 21-58 (310)
474 3d64_A Adenosylhomocysteinase; 39.8 41 0.0014 30.8 5.5 83 97-191 276-361 (494)
475 3tri_A Pyrroline-5-carboxylate 39.7 24 0.00082 29.4 3.7 89 99-197 4-100 (280)
476 3i83_A 2-dehydropantoate 2-red 39.2 45 0.0015 28.2 5.5 92 99-193 3-104 (320)
477 3h9u_A Adenosylhomocysteinase; 38.6 20 0.00069 32.2 3.2 35 97-131 210-247 (436)
478 4a7p_A UDP-glucose dehydrogena 38.1 38 0.0013 30.5 5.0 97 97-193 7-128 (446)
479 4h0n_A DNMT2; SAH binding, tra 38.0 17 0.00057 31.4 2.5 63 99-164 4-76 (333)
480 2vz8_A Fatty acid synthase; tr 37.8 18 0.00062 40.0 3.3 93 94-193 1664-1769(2512)
481 3qsg_A NAD-binding phosphogluc 37.5 18 0.00061 30.7 2.6 85 98-191 24-114 (312)
482 3r6d_A NAD-dependent epimerase 36.9 25 0.00084 27.6 3.3 69 100-168 7-84 (221)
483 3k96_A Glycerol-3-phosphate de 36.7 17 0.0006 31.6 2.4 91 98-191 29-130 (356)
484 3is3_A 17BETA-hydroxysteroid d 36.3 36 0.0012 27.8 4.3 97 97-193 17-151 (270)
485 3g17_A Similar to 2-dehydropan 35.7 7.1 0.00024 32.8 -0.2 89 99-196 3-97 (294)
486 3r3s_A Oxidoreductase; structu 35.0 45 0.0015 27.7 4.8 97 97-193 48-184 (294)
487 2cvz_A Dehydrogenase, 3-hydrox 34.7 27 0.00092 28.7 3.3 83 100-191 3-87 (289)
488 1wma_A Carbonyl reductase [NAD 34.2 18 0.00062 29.3 2.1 97 97-193 3-137 (276)
489 4gx0_A TRKA domain protein; me 34.1 60 0.0021 29.8 5.9 93 99-199 349-447 (565)
490 3ego_A Probable 2-dehydropanto 34.1 86 0.0029 26.2 6.4 100 99-205 3-109 (307)
491 1g0o_A Trihydroxynaphthalene r 33.7 32 0.0011 28.3 3.6 97 97-193 28-162 (283)
492 3iei_A Leucine carboxyl methyl 33.7 2.2E+02 0.0077 24.2 10.5 44 153-196 187-232 (334)
493 3v2g_A 3-oxoacyl-[acyl-carrier 32.9 77 0.0026 25.8 5.8 97 97-193 30-164 (271)
494 3rft_A Uronate dehydrogenase; 32.5 9.2 0.00032 31.4 -0.0 75 99-175 4-82 (267)
495 1yqg_A Pyrroline-5-carboxylate 32.4 72 0.0025 25.7 5.5 34 100-133 2-39 (263)
496 4hp8_A 2-deoxy-D-gluconate 3-d 32.3 95 0.0033 25.3 6.2 72 97-168 8-90 (247)
497 2iz1_A 6-phosphogluconate dehy 32.0 19 0.00065 32.6 2.0 89 99-194 6-102 (474)
498 3dhn_A NAD-dependent epimerase 31.8 8.3 0.00028 30.5 -0.4 69 99-167 5-77 (227)
499 1xq6_A Unknown protein; struct 31.7 26 0.00088 27.8 2.6 70 98-167 4-79 (253)
500 1np3_A Ketol-acid reductoisome 31.6 20 0.00068 30.8 2.0 84 98-191 16-104 (338)
No 1
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=2.6e-20 Score=158.97 Aligned_cols=110 Identities=22% Similarity=0.391 Sum_probs=87.8
Q ss_pred HHHHhhCC--CCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC-----CCceEEeecccccCCCCCCCcee
Q 023470 89 NLYRQMLR--PGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR-----LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 89 ~~~~~~~~--~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-----~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
..+...+. ++.+|||+|||+|....... ...+|+|+|+|+.|++.++. ...+..+|+ ..+++++++||
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI---EDIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCG---GGCCCCTTCEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcch---hhCCCCCCCeE
Confidence 34445554 67899999999886543322 33399999999999976542 345677777 67888889999
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
+|++..+++|++++..++++++++|||||.++++++++....
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 152 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTA 152 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHS
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCcccc
Confidence 999999999999999999999999999999999988765433
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=2.9e-19 Score=153.63 Aligned_cols=161 Identities=16% Similarity=0.261 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchh---hhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccc
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHL---PQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQD 148 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~---~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~ 148 (282)
..+.+..++...++++.+|||||||+|... +... ++++|+|+|+|+.|++.|++ ...+..+|+
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~--- 132 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI--- 132 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT---
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc---
Confidence 344455566677889999999999998643 3322 56799999999999976642 235666776
Q ss_pred cCCCCCCCceeEEEecchhhccCCH--HHHHHHHHHcccCCcEEEEEEcCc----hhHH---HHHHhhhcCCCCcchhhH
Q 023470 149 QKLEFDHCSFDAVVCAVSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFSNR----MFYE---KAISAWRDGTAYGRVQLV 219 (282)
Q Consensus 149 ~~l~~~~~s~D~v~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~ 219 (282)
.++++ ++||+|++++++||+++. ..+|++++|+|||||.|+++.... .... .....+....++......
T Consensus 133 ~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~ 210 (261)
T 4gek_A 133 RDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEIS 210 (261)
T ss_dssp TTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTH
T ss_pred ccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 66765 469999999999999754 468999999999999999874322 1111 111112112222221111
Q ss_pred H--HHHH-hhCCCCchHHhhcCCCCccccccc
Q 023470 220 V--QYFQ-CVEGYTNPEIVRKLPADSAAAQED 248 (282)
Q Consensus 220 ~--~~~~-~~~gF~~~ei~~~~~~~g~~~~~~ 248 (282)
. ..+. ...-++..+....+..+||...+.
T Consensus 211 ~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 211 QKRSMLENVMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp HHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred HHHhhhcccccCCCHHHHHHHHHHcCCCeEEE
Confidence 1 1111 123466677788888888876553
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=8.1e-19 Score=150.48 Aligned_cols=105 Identities=17% Similarity=0.228 Sum_probs=86.0
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCC--ceEEeecccccCCCCCCCceeEEEe
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLE--YFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~--~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.+.+....+.+.+|||||||+|....... .+.+|+|+|+|+.|++.++... .+.+++. +++++++++||+|+|
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~---e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPA---EDTGLPPASVDVAIA 105 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCT---TCCCCCSSCEEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhh---hhhcccCCcccEEEE
Confidence 344455566677899999999986544332 5689999999999999887654 5666676 789999999999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
..++||+ +++.++++++|+|||||.|++...
T Consensus 106 ~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 106 AQAMHWF-DLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeehhHh-hHHHHHHHHHHHcCCCCEEEEEEC
Confidence 9999888 688999999999999999987643
No 4
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=1.3e-18 Score=147.17 Aligned_cols=110 Identities=23% Similarity=0.326 Sum_probs=90.6
Q ss_pred HHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC-----CceEEeecccccCCCCCCCcee
Q 023470 86 TLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL-----EYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 86 ~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~-----~~~~~~d~~~~~~l~~~~~s~D 159 (282)
.+...+...++++.+|||||||+|....... .+.+|+|+|+|+.+++.++.. ..+...|+ ..+++++++||
T Consensus 42 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD 118 (242)
T 3l8d_A 42 TIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDL---SSLPFENEQFE 118 (242)
T ss_dssp THHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBT---TBCSSCTTCEE
T ss_pred HHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcch---hcCCCCCCCcc
Confidence 3555666677889999999999886543322 467999999999999766543 35677777 67788889999
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+|++..+++|++++..++++++++|||||.++++++++.
T Consensus 119 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 119 AIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp EEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 999999999999999999999999999999999986653
No 5
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.77 E-value=1.4e-18 Score=147.09 Aligned_cols=114 Identities=10% Similarity=0.123 Sum_probs=88.3
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCCCCCcee
Q 023470 85 STLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 85 ~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
..+.+.+... .++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ .++ .++++||
T Consensus 31 ~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~---~~~-~~~~~fD 105 (250)
T 2p7i_A 31 PFMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRF---EDA-QLPRRYD 105 (250)
T ss_dssp HHHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG---GGC-CCSSCEE
T ss_pred HHHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccH---HHc-CcCCccc
Confidence 3444444433 356789999999987654433 45689999999999976543 345667776 444 4678999
Q ss_pred EEEecchhhccCCHHHHHHHHH-HcccCCcEEEEEEcCchhHHHH
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVF-RVLKPGGVFIVSFSNRMFYEKA 203 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~-r~LkpgG~li~~~~~~~~~~~~ 203 (282)
+|++.++++|++++..++++++ |+|||||.+++++++.......
T Consensus 106 ~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~ 150 (250)
T 2p7i_A 106 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQ 150 (250)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH
T ss_pred EEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH
Confidence 9999999999999999999999 9999999999999887655443
No 6
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=5.9e-19 Score=149.47 Aligned_cols=141 Identities=13% Similarity=0.055 Sum_probs=101.6
Q ss_pred hCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC--CCCCCceeEEEecchhhcc
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL--EFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l--~~~~~s~D~v~~~~~l~~~ 170 (282)
.++++.+|||||||+|....... .+.+|+|+|+|+.|++.++....+...|. .++ ++++++||+|+|..+++|+
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~---~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDA---IEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCH---HHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccH---HHHhhhcCCCCeeEEEECCchhhC
Confidence 34577899999999887543322 36789999999999988877766666666 343 6778999999999999999
Q ss_pred CC--HHHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcc--hhhHHHHHHhhCCCCchHHhhcC
Q 023470 171 QQ--PEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGR--VQLVVQYFQCVEGYTNPEIVRKL 238 (282)
Q Consensus 171 ~~--~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gF~~~ei~~~~ 238 (282)
++ ...++++++++|||||.+++.+++..........|........ ...+...+ ..+||+..++....
T Consensus 115 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFIL-EYLGFRDVKIEFFE 185 (240)
T ss_dssp CGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHH-HHHTCEEEEEEEEC
T ss_pred CcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHH-HHCCCeEEEEEEec
Confidence 94 4899999999999999999999987666555544432222111 12222222 33788876655443
No 7
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.75 E-value=2.1e-17 Score=136.94 Aligned_cols=109 Identities=24% Similarity=0.322 Sum_probs=90.4
Q ss_pred HHHHHHHhhCCCCCeEEEeCCcccchhhhhcCCC-eEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEE
Q 023470 86 TLTNLYRQMLRPGSEVLDLMSSWVSHLPQEVSYK-RVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 86 ~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~-~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
.....+...+.++.+|||+|||+|...... +. +++|+|+|+.|++.++. ...+...|+ ..+++++++||+|
T Consensus 25 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v 99 (211)
T 2gs9_A 25 EEERALKGLLPPGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWG---EALPFPGESFDVV 99 (211)
T ss_dssp HHHHHHHTTCCCCSEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHHCTTSEEECCCT---TSCCSCSSCEEEE
T ss_pred HHHHHHHHhcCCCCeEEEECCCCCHhHHhC--CCCeEEEEeCCHHHHHHHHHhCCCcEEEEccc---ccCCCCCCcEEEE
Confidence 344556666668889999999998766554 45 99999999999976653 345666776 6788888999999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
++..+++|++++..+++++.++|||||.++++++++..
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 100 LLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp EEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred EEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 99999999999999999999999999999999887643
No 8
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.75 E-value=4.8e-19 Score=149.77 Aligned_cols=100 Identities=24% Similarity=0.387 Sum_probs=81.9
Q ss_pred CCCeEEEeCCcccchhhhhc-CCC-eEEEEcCCHHHHHhCCCC-----CceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYK-RVVGHGLNAQELAKNPRL-----EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~-~v~giD~s~~~l~~~~~~-----~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
++.+|||||||+|....... .+. +|+|+|+|+.|++.++.. ..+...|+ ..+++++++||+|++..+++|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADL---DKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG---GGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh---hhccCCCCCceEEEEeccccc
Confidence 67899999999886543322 344 999999999999765432 35566666 567777889999999999999
Q ss_pred cCCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 170 LQQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 170 ~~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
++++..++++++++|||||.++++++++..
T Consensus 120 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 149 (243)
T 3bkw_A 120 VEDVARLFRTVHQALSPGGHFVFSTEHPIY 149 (243)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred cchHHHHHHHHHHhcCcCcEEEEEeCCccc
Confidence 999999999999999999999999887643
No 9
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.74 E-value=1.6e-17 Score=138.44 Aligned_cols=162 Identities=12% Similarity=0.043 Sum_probs=110.0
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..++++ ++||+|++..+++|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDF---LSFEVP-TSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCS---SSCCCC-SCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCCh---hhcCCC-CCeEEEEECcchhcCC
Confidence 67899999999887544332 46899999999999876543 356777777 677776 8999999999999999
Q ss_pred CHHH--HHHHHHHcccCCcEEEEEEcCchhHHHHH--HhhhcCCCCcchhhHHHHHHhhCCCCchHHhhcCCCCcccccc
Q 023470 172 QPEK--VFAEVFRVLKPGGVFIVSFSNRMFYEKAI--SAWRDGTAYGRVQLVVQYFQCVEGYTNPEIVRKLPADSAAAQE 247 (282)
Q Consensus 172 ~~~~--~l~~~~r~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~gF~~~ei~~~~~~~g~~~~~ 247 (282)
++.. +++++.++|||||.+++..++........ ..+.....+... ........-++..++...+..+||....
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 8877 99999999999999999976543222211 111111122111 1111122334667888888888886654
Q ss_pred ccCchHHHHHHhccCCCCCCeEEEEEeecCcc
Q 023470 248 DKSPISWLMRLLGFLSGSDPFYAVIAYKNFKP 279 (282)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~v~~~k~~~~ 279 (282)
.. .....|++.+.|..-|
T Consensus 198 ~~--------------~~~~~w~~~~~~~~~~ 215 (220)
T 3hnr_A 198 TR--------------LNHFVWVMEATKQLEH 215 (220)
T ss_dssp EE--------------CSSSEEEEEEEECSCC
T ss_pred ee--------------ccceEEEEeehhhhhh
Confidence 32 2255666666665544
No 10
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.72 E-value=1.1e-17 Score=145.24 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=86.8
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCC-CCC
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLE-FDH 155 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~-~~~ 155 (282)
+..++.....++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..++ +.+
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~ 134 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA---QDVASHLE 134 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCG---GGTGGGCS
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCH---HHhhhhcC
Confidence 444455444567799999999887544322 47799999999999976542 234667776 5555 678
Q ss_pred CceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 156 CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
++||+|++..+++|++++..+++++.++|||||.+++.+++...
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 99999999999999999999999999999999999999887543
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.72 E-value=8.9e-18 Score=143.81 Aligned_cols=98 Identities=23% Similarity=0.363 Sum_probs=80.3
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
..++.+|||||||+|....... ...+|+|+|+|+.|++.++. ...+.++|+ ..+++++++||+|++++
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQMPFTDERFHIVTCRI 111 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CCCSCTTCEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhCCCCCCCEEEEEEhh
Confidence 3478899999999886543322 34599999999999976542 245677777 77888899999999999
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+++|++|+..++++++|+|||||.+++..+
T Consensus 112 ~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 112 AAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999999999999999999999999998643
No 12
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=7.1e-17 Score=134.82 Aligned_cols=105 Identities=16% Similarity=0.248 Sum_probs=85.2
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC-CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR-LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~-~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
....+....+ +.+|||+|||+|......... +|+|+|+.|++.++. ...+...++ ..+++++++||+|++..
T Consensus 38 ~~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~---~~vD~s~~~~~~a~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 110 (219)
T 1vlm_A 38 ELQAVKCLLP-EGRGVEIGVGTGRFAVPLKIK---IGVEPSERMAEIARKRGVFVLKGTA---ENLPLKDESFDFALMVT 110 (219)
T ss_dssp HHHHHHHHCC-SSCEEEETCTTSTTHHHHTCC---EEEESCHHHHHHHHHTTCEEEECBT---TBCCSCTTCEEEEEEES
T ss_pred HHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHH---hccCCCHHHHHHHHhcCCEEEEccc---ccCCCCCCCeeEEEEcc
Confidence 3344555554 889999999998766554333 999999999976654 345667776 66788888999999999
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+++|++++..+++++.++|||||.+++.++++.
T Consensus 111 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 111 TICFVDDPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp CGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred hHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 999999999999999999999999999987654
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=2.4e-17 Score=135.75 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=82.1
Q ss_pred CCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEEEecchhhccC--
Q 023470 98 GSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ-- 171 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~-- 171 (282)
+.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..+++++++||+|++..+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTI---TDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCG---GGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcc---cccccCCCCeEEEEehhhHhcCCHH
Confidence 7889999999887543322 46799999999999976653 356777777 67788889999999999999997
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
++..+++++.++|||||.+++++++..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 889999999999999999999987653
No 14
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=3.7e-18 Score=146.85 Aligned_cols=163 Identities=11% Similarity=0.095 Sum_probs=97.7
Q ss_pred CCCCCeEEEeCCcccchhhhh-c-CCCeEEEEcCCHHHHHhCCCC-----------------------------------
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE-V-SYKRVVGHGLNAQELAKNPRL----------------------------------- 137 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~-~-~~~~v~giD~s~~~l~~~~~~----------------------------------- 137 (282)
..++.+|||||||+|.+.... . ...+|+|+|+|+.|++.+++.
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 346788999999987543321 2 334799999999999754320
Q ss_pred --C-ceEEeecccccCCCC---CCCceeEEEecchhhcc----CCHHHHHHHHHHcccCCcEEEEEEcCc-hhHHHHHHh
Q 023470 138 --E-YFIVKDLNQDQKLEF---DHCSFDAVVCAVSVQYL----QQPEKVFAEVFRVLKPGGVFIVSFSNR-MFYEKAISA 206 (282)
Q Consensus 138 --~-~~~~~d~~~~~~l~~---~~~s~D~v~~~~~l~~~----~~~~~~l~~~~r~LkpgG~li~~~~~~-~~~~~~~~~ 206 (282)
. .+..+|+.. ..++ ..++||+|++++++||+ ++...++++++|+|||||.|+++.... ..+.
T Consensus 133 ~~i~~~~~~D~~~--~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~----- 205 (263)
T 2a14_A 133 AAVKRVLKCDVHL--GNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM----- 205 (263)
T ss_dssp HHEEEEEECCTTS--SSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE-----
T ss_pred hhhheEEeccccC--CCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce-----
Confidence 0 155666632 1232 35789999999999996 345679999999999999999985321 1100
Q ss_pred hhcCCCCcchhhHHHHHHhhCCCCchHHhhcCCCCccccccccCchHHHHHHhccCCCCCCeEEEEEeecCcc
Q 023470 207 WRDGTAYGRVQLVVQYFQCVEGYTNPEIVRKLPADSAAAQEDKSPISWLMRLLGFLSGSDPFYAVIAYKNFKP 279 (282)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~gF~~~ei~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~k~~~~ 279 (282)
+. ...+. ...|+..++...+..+||.......+.. ..-..+....+++++.++|..-|
T Consensus 206 ~g-~~~~~-----------~~~~~~~~l~~~l~~aGF~i~~~~~~~~---~~~~~~~~~~~~~~~~a~K~~~~ 263 (263)
T 2a14_A 206 VG-KREFS-----------CVALEKGEVEQAVLDAGFDIEQLLHSPQ---SYSVTNAANNGVCCIVARKKPGP 263 (263)
T ss_dssp ET-TEEEE-----------CCCCCHHHHHHHHHHTTEEEEEEEEECC---CCCTTTCCCCCEEEEEEEECC--
T ss_pred eC-CeEee-----------ccccCHHHHHHHHHHCCCEEEEEeeccc---ccccccCCCCceEEEEEEecCCC
Confidence 00 00000 0135556666666666665444322110 00111112357888899886543
No 15
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.70 E-value=1.6e-17 Score=142.79 Aligned_cols=97 Identities=20% Similarity=0.108 Sum_probs=80.6
Q ss_pred CCCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
++++.+|||||||+|...... .+..+|+|+|+|+.+++.++. ...+...|+ .++++++++||+|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM---DDLPFRNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh---hhCCCCCCCEEEEEE
Confidence 457889999999988654332 256799999999999865432 246677777 678888899999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
..+++|+ ++..+++++.++|||||.+++..+
T Consensus 121 ~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 121 EGAIYNI-GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp SSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCceec-CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999 899999999999999999998865
No 16
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.70 E-value=1.3e-17 Score=145.58 Aligned_cols=100 Identities=10% Similarity=0.075 Sum_probs=73.0
Q ss_pred CCCeEEEeCCcccch-------hhhhcCCCeE--EEEcCCHHHHHhCCCC-------C--ceEEeecccccCC------C
Q 023470 97 PGSEVLDLMSSWVSH-------LPQEVSYKRV--VGHGLNAQELAKNPRL-------E--YFIVKDLNQDQKL------E 152 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~-------~~~~~~~~~v--~giD~s~~~l~~~~~~-------~--~~~~~d~~~~~~l------~ 152 (282)
++.+|||||||+|.. +....+...| +|+|+|++|++.++.. . .+....... +++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETS-SEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH-HHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecch-hhhhhhhccc
Confidence 567899999999852 1222245644 9999999999754321 1 222222211 223 2
Q ss_pred CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 153 FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++++||+|++.+++||++|+..++++++|+|||||++++...+.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 567899999999999999999999999999999999999876554
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.70 E-value=6.1e-17 Score=141.27 Aligned_cols=99 Identities=19% Similarity=0.144 Sum_probs=82.2
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..+++++++||+|++
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~ 156 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEIPCEDNSYDFIWS 156 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSCSSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccCCCCCCCEeEEEe
Confidence 4578899999999886544322 25699999999999865542 346677777 778888899999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++|++++..++++++|+|||||++++..+.
T Consensus 157 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 157 QDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 999999999999999999999999999998654
No 18
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=3.6e-17 Score=143.51 Aligned_cols=155 Identities=21% Similarity=0.264 Sum_probs=104.5
Q ss_pred HHHHhhCCCCCeEEEeCCcccchhhh----hcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCC
Q 023470 89 NLYRQMLRPGSEVLDLMSSWVSHLPQ----EVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDH 155 (282)
Q Consensus 89 ~~~~~~~~~~~~vLDiGcG~~~~~~~----~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~ 155 (282)
..+...+.++.+|||||||+|..... ..++.+|+|+|+|+.+++.++.+ ..+..+|+ .+++++
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~- 185 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDA---WKLDTR- 185 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCG---GGCCCC-
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECch---hcCCcc-
Confidence 44455678899999999998875443 23678999999999998765421 35677777 677776
Q ss_pred CceeEEEecchhhccCCHHH---HHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcc-hhhHHHH-HHhh----
Q 023470 156 CSFDAVVCAVSVQYLQQPEK---VFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGR-VQLVVQY-FQCV---- 226 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~~~~~~---~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~---- 226 (282)
++||+|+++.+++|++++.. ++++++++|||||+++++...+.........|.-. .+.. ......+ +...
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~ 264 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQ-AIDPHDLQLQQLVFTRLIQPR 264 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGG-GSCHHHHHHHHHHHHHTTCCS
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceee-ccccchhhhhhhHHHHHHhhh
Confidence 89999999999999998887 79999999999999999865432222222223210 1111 0011111 1111
Q ss_pred --CCCCchHHhhcCCCCccccccc
Q 023470 227 --EGYTNPEIVRKLPADSAAAQED 248 (282)
Q Consensus 227 --~gF~~~ei~~~~~~~g~~~~~~ 248 (282)
.-++..++...+..+||.....
T Consensus 265 ~~~~~~~~~~~~~l~~aGF~~v~~ 288 (305)
T 3ocj_A 265 WNALRTHAQTRAQLEEAGFTDLRF 288 (305)
T ss_dssp CCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCHHHHHHHHHHCCCEEEEE
Confidence 1256777888888888866544
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.69 E-value=6e-18 Score=140.43 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=79.2
Q ss_pred CCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEecch
Q 023470 98 GSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
+.+|||+|||+|....... ++.+|+|+|+|+.+++.++. ...+...|+ .++++++++||+|+++.+
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV---HNIPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT---TBCSSCTTCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH---HHCCCCcccccEEEECch
Confidence 3499999999886443222 57799999999999865542 245677777 678888899999999999
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++|++++..++++++++|||||.+++..+.
T Consensus 121 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 121 VFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 999999999999999999999999998543
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.69 E-value=4.4e-17 Score=137.93 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=81.8
Q ss_pred hCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ +.+++++++||+|++.
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~v~~~ 94 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESLPFPDDSFDIITCR 94 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBCCSCTTCEEEEEEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc---ccCCCCCCcEEEEEEC
Confidence 35578899999999886543322 34699999999999876542 345667776 6788888999999999
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.+++|++++..++++++++|||||.+++....
T Consensus 95 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 95 YAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 99999999999999999999999999987543
No 21
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.69 E-value=1.3e-16 Score=136.24 Aligned_cols=113 Identities=17% Similarity=0.146 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHh---hCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccC
Q 023470 82 GFISTLTNLYRQ---MLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQK 150 (282)
Q Consensus 82 ~~~~~~~~~~~~---~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~ 150 (282)
..+..+.+.+.. .+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|. ..
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~ 97 (263)
T 2yqz_A 21 EVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA---RA 97 (263)
T ss_dssp HHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT---TS
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc---cc
Confidence 455556555533 45678899999999887543322 46799999999999876532 335667776 67
Q ss_pred CCCCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 151 LEFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 151 l~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++++++||+|++..+++|++++..++++++++|||||.+++.++..
T Consensus 98 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (263)
T 2yqz_A 98 IPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQA 144 (263)
T ss_dssp CCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCC
Confidence 88888999999999999999999999999999999999999885443
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.69 E-value=6.5e-17 Score=136.12 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=98.0
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCceeEEEecch
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
.++.+|||+|||+|... +...++.+|+|+|+|+.|++.++. ...+..+|+ ..++++ ++||+|++..+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~~~~~ 118 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY---SKYDFE-EKYDMVVSALS 118 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCT---TTCCCC-SCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCch---hccCCC-CCceEEEEeCc
Confidence 36789999999988644 333468899999999999876542 335667776 667766 89999999999
Q ss_pred hhccCCHH--HHHHHHHHcccCCcEEEEEEcCchhHH----HHHHhhh---cCCCCcchhhHH--HHHHhhCCCCchHHh
Q 023470 167 VQYLQQPE--KVFAEVFRVLKPGGVFIVSFSNRMFYE----KAISAWR---DGTAYGRVQLVV--QYFQCVEGYTNPEIV 235 (282)
Q Consensus 167 l~~~~~~~--~~l~~~~r~LkpgG~li~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~--~~~~~~~gF~~~ei~ 235 (282)
++|+++++ .++++++|+|||||.+++..+...... .....|. ...++....... ........++..++.
T Consensus 119 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 119 IHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 99998766 499999999999999998865432111 1112221 111222111000 011122446667777
Q ss_pred hcCCCCccccccc
Q 023470 236 RKLPADSAAAQED 248 (282)
Q Consensus 236 ~~~~~~g~~~~~~ 248 (282)
..+..+||...+.
T Consensus 199 ~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 199 NWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCCceee
Confidence 7888888866554
No 23
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.69 E-value=3.1e-17 Score=135.99 Aligned_cols=103 Identities=19% Similarity=0.235 Sum_probs=83.8
Q ss_pred HHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--CCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
+...++++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...++ ..++ .+++||+|+++.++
T Consensus 37 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l 112 (211)
T 3e23_A 37 FLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLF---HQLD-AIDAYDAVWAHACL 112 (211)
T ss_dssp HHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCG---GGCC-CCSCEEEEEECSCG
T ss_pred HHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeee---ccCC-CCCcEEEEEecCch
Confidence 34456678899999999887544332 46799999999999977654 345677777 5666 67899999999999
Q ss_pred hccC--CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 168 QYLQ--QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 168 ~~~~--~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|++ ++..++++++++|||||.++++++..
T Consensus 113 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 113 LHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 9998 77889999999999999999987653
No 24
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=3.8e-17 Score=136.57 Aligned_cols=105 Identities=20% Similarity=0.227 Sum_probs=84.9
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC-CceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL-EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~-~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.++.+|||+|||+|....... .+.+++|+|+|+.+++.++.. ..+...|+.. ..+++++++||+|++..+++|++++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIET-MDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTT-CCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhh-cCCCCCCCccCEEEECChhhhcCCH
Confidence 467899999999886543322 258999999999999877654 3566777632 2367778899999999999999999
Q ss_pred HHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 174 EKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
..+++++.++|||||.+++++++.....
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 137 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASIPNVSHIS 137 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEEECTTSHH
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCcchHH
Confidence 9999999999999999999998865543
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=8.1e-17 Score=138.65 Aligned_cols=98 Identities=26% Similarity=0.335 Sum_probs=81.0
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ ..+++++++||+|++.
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~ 136 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDLPFEDASFDAVWAL 136 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCSCTTCEEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccCCCCCCCccEEEEe
Confidence 477899999999886543322 36899999999999865532 245667777 6788888999999999
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.+++|++++..+++++.++|||||++++..+.
T Consensus 137 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 137 ESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp SCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred chhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 99999999999999999999999999987643
No 26
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.69 E-value=7.3e-17 Score=137.55 Aligned_cols=98 Identities=20% Similarity=0.190 Sum_probs=79.6
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. +..+..+|+ .++++ +++||+|+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~~~-~~~fD~V~~ 109 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGYVA-NEKCDVAAC 109 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTCCC-SSCEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhCCc-CCCCCEEEE
Confidence 4578899999999886443222 36799999999999866532 345667776 66766 789999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++|++++..++++++|+|||||.+++..+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 110 VGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp ESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 999999999999999999999999999997653
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.68 E-value=5.5e-17 Score=138.39 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=79.9
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
++++.+|||+|||+|....... ...+|+|+|+|+.+++.++.. ..+...|+ ..+++++++||+|++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~ 120 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNLPFQNEELDLIWS 120 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCSSCTTCEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhCCCCCCCEEEEEe
Confidence 4567899999999886543322 234999999999998754421 45677777 778888899999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++|+ ++..+++++.++|||||++++..+.
T Consensus 121 ~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 121 EGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp ESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 9999999 8999999999999999999998653
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.68 E-value=2.7e-16 Score=130.91 Aligned_cols=99 Identities=20% Similarity=0.184 Sum_probs=81.4
Q ss_pred CCCCCeEEEeCCcccchhhh---hc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
+.++.+|||+|||+|..... .. +..+|+|+|+|+.+++.++. ...+...|+ ..+++++++||+|+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE---NKIPLPDNTVDFIF 111 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT---TBCSSCSSCEEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc---ccCCCCCCCeeEEE
Confidence 45788999999998764433 22 45799999999999866542 245667776 67788889999999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++.+++|++++..+++++.++|||||.+++....
T Consensus 112 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 112 MAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp EESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 9999999999999999999999999999988644
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.68 E-value=5.6e-17 Score=136.10 Aligned_cols=104 Identities=24% Similarity=0.336 Sum_probs=83.3
Q ss_pred HHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCC
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHC 156 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~ 156 (282)
+...++++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...++ ..++++++
T Consensus 24 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~ 100 (235)
T 3sm3_A 24 IHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA---SSLSFHDS 100 (235)
T ss_dssp HHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT---TSCCSCTT
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc---cccCCCCC
Confidence 34456788999999999886543322 46799999999999865432 124556666 67788889
Q ss_pred ceeEEEecchhhccCCHH---HHHHHHHHcccCCcEEEEEEcCc
Q 023470 157 SFDAVVCAVSVQYLQQPE---KVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 157 s~D~v~~~~~l~~~~~~~---~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+||+|++..+++|++++. .+++++.++|||||.+++..++.
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 999999999999999988 89999999999999999986654
No 30
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=2.4e-16 Score=135.19 Aligned_cols=98 Identities=14% Similarity=0.102 Sum_probs=82.7
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
.++.+|||||||+|....... ++.+|+|+|+|+.|++.++.. ..+.+.|+ +.+++++++||+|++.++++|+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYA---ENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCT---TSCCSCTTCBSEEEEESCGGGCSS
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECch---hhCCCCCCCEeEEEEcchHhhccC
Confidence 578899999999887554332 678999999999999987765 35666676 678888899999999999999999
Q ss_pred HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+..++++++++|| ||.+++...++
T Consensus 110 ~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 110 LEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp HHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred HHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 9999999999999 99887765543
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=2.9e-16 Score=135.88 Aligned_cols=100 Identities=25% Similarity=0.363 Sum_probs=83.6
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
..++.+|||||||+|....... ++.+|+|+|+|+.|++.++. ...+.+.|+ ..+++ +++||+|++..+++|+
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADA---RNFRV-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCT---TTCCC-SSCEEEEEEESCGGGC
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECCh---hhCCc-CCCcCEEEEcchhhhC
Confidence 3467899999999887543322 67899999999999976653 456778887 66776 5799999999999999
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 171 QQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 171 ~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+++..++++++|+|||||.+++.+++..
T Consensus 131 ~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 131 KEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred cCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 9999999999999999999999887653
No 32
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.67 E-value=1.8e-17 Score=141.84 Aligned_cols=99 Identities=20% Similarity=0.241 Sum_probs=81.1
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCceeEEEecch
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ ..+++++++||+|++..+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTKEFPENNFDLIYSRDA 129 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccCCCCCCcEEEEeHHHH
Confidence 3467899999999886543322 16799999999999976543 335667777 677888899999999999
Q ss_pred hhcc--CCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 167 VQYL--QQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 167 l~~~--~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++|+ .++..++++++++|||||.+++..+.
T Consensus 130 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 130 ILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999 78899999999999999999998653
No 33
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=1.7e-16 Score=135.95 Aligned_cols=111 Identities=22% Similarity=0.224 Sum_probs=88.8
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEE
Q 023470 85 STLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 85 ~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
..+...+...++++.+|||||||+|....... .+.+|+|+|+|+.|++.++.. ..+...|+ ..+++++++||+|
T Consensus 42 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~---~~~~~~~~~fD~v 118 (260)
T 2avn_A 42 RLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKA---EDLPFPSGAFEAV 118 (260)
T ss_dssp HHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCT---TSCCSCTTCEEEE
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcH---HHCCCCCCCEEEE
Confidence 44556666667788899999999987554332 467999999999999765432 23677777 6788888999999
Q ss_pred Eecchhhcc-CCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 162 VCAVSVQYL-QQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 162 ~~~~~l~~~-~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
++..+++|. +++..+++++.++|||||.+++++++..
T Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 119 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 999877666 7899999999999999999999988764
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.67 E-value=3.8e-16 Score=137.39 Aligned_cols=97 Identities=22% Similarity=0.198 Sum_probs=80.2
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. +..+..+|+ .++++++++||+|++.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDTPFDKGAVTASWNN 192 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCCCTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcCCCCCCCEeEEEEC
Confidence 467899999999886543322 26799999999999976542 346777777 6788888999999999
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.+++|+ ++..+++++.++|||||++++..+.
T Consensus 193 ~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 193 ESTMYV-DLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp SCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CchhhC-CHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 999999 6999999999999999999987653
No 35
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.66 E-value=7.5e-17 Score=147.46 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=80.8
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCC-ceEEeecccc--cCCCCCCCceeEEEecchhhccC
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQD--QKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~~--~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
.++.+|||||||+|..+.... .+.+|+|+|+|+.|++.++... ......+..+ ..+++++++||+|+++++++|++
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~ 185 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP 185 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcC
Confidence 467899999999887654432 5679999999999998776542 1111111100 44566678999999999999999
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
++..++++++|+|||||++++++++...
T Consensus 186 d~~~~l~~~~r~LkpgG~l~i~~~~~~~ 213 (416)
T 4e2x_A 186 YVQSVLEGVDALLAPDGVFVFEDPYLGD 213 (416)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCChHH
Confidence 9999999999999999999999887543
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.66 E-value=9e-17 Score=133.86 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=75.6
Q ss_pred CCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCCceeE
Q 023470 97 PGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
++.+|||+|||+|...... .+..+|+|+|+|+.|++.++. ...+..+|+ ...+.++++||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~ 105 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL---TYQDKRFHGYDA 105 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT---TSCCGGGCSCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc---ccccccCCCcCE
Confidence 6789999999988754433 244799999999999876542 245666666 556666689999
Q ss_pred EEecchhhccCCH--HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|++..+++|++++ ..+++++.++|||||.++++ ++.
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~-~~~ 143 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT-PNI 143 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE-EBH
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc-cCc
Confidence 9999999999866 78999999999999965554 443
No 37
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.66 E-value=1.8e-16 Score=136.68 Aligned_cols=99 Identities=23% Similarity=0.398 Sum_probs=82.2
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
++++.+|||||||+|... +...++.+|+|+|+|+.+++.++. ...+...|+ ..+++++++||+|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANI---FSLPFEDSSFDHIFV 111 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG---GGCCSCTTCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc---ccCCCCCCCeeEEEE
Confidence 357889999999988644 333457899999999999875532 345667777 677888899999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++|++++..+++++.++|||||.+++..++
T Consensus 112 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 112 CFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred echhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999999999999999999999999999998654
No 38
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=1.2e-16 Score=127.86 Aligned_cols=145 Identities=12% Similarity=0.043 Sum_probs=103.1
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC---CceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL---EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~---~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
+.++.+|||+|||.|....... .+.+|+|+|+|+.+++.++.. ..+...| +++++++||+|+++.+++|+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d------~~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP------KEIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG------GGSCTTCEEEEEEESCSTTC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC------CCCCCCceEEEEEccchhcc
Confidence 4577899999999886544332 224999999999998766432 2333332 66778899999999999999
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcchhhHHHHHHhhCCCCchHHhhcCCCCccccccccC
Q 023470 171 QQPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGRVQLVVQYFQCVEGYTNPEIVRKLPADSAAAQEDKS 250 (282)
Q Consensus 171 ~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gF~~~ei~~~~~~~g~~~~~~~~ 250 (282)
+++..+++++.++|||||.+++........ ..... ....|+..++.+.+. ||.......
T Consensus 89 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~---------~~~~~----------~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 89 DDKQHVISEVKRILKDDGRVIIIDWRKENT---------GIGPP----------LSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECSSCC---------SSSSC----------GGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred cCHHHHHHHHHHhcCCCCEEEEEEcCcccc---------ccCch----------HhhhcCHHHHHHHHh--CcEEEEccC
Confidence 999999999999999999999986543210 00000 013477778887777 886655422
Q ss_pred chHHHHHHhccCCCCCCeEEEEEeecCcc
Q 023470 251 PISWLMRLLGFLSGSDPFYAVIAYKNFKP 279 (282)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~v~~~k~~~~ 279 (282)
.....|.+.+.++-.|
T Consensus 148 -------------~~~~~~~l~~~~~~~~ 163 (170)
T 3i9f_A 148 -------------PTPYHFGLVLKRKTSE 163 (170)
T ss_dssp -------------SSTTEEEEEEEECCCC
T ss_pred -------------CCCceEEEEEecCCCC
Confidence 2356788888877655
No 39
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.66 E-value=2.5e-16 Score=142.64 Aligned_cols=98 Identities=22% Similarity=0.265 Sum_probs=80.8
Q ss_pred CCCCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC----------------CCceEEeecccccCC----
Q 023470 96 RPGSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR----------------LEYFIVKDLNQDQKL---- 151 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~----------------~~~~~~~d~~~~~~l---- 151 (282)
.++.+|||||||+|.. ++... +..+|+|+|+|+.|++.++. +..+...|+ ..+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~---~~l~~~~ 158 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI---ENLATAE 158 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT---TCGGGCB
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH---HHhhhcc
Confidence 4678999999998863 33333 57799999999999976542 345677777 444
Q ss_pred --CCCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 152 --EFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 152 --~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++++++||+|+++.+++|++++..++++++|+|||||++++..+.
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 888899999999999999999999999999999999999997543
No 40
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.66 E-value=3.9e-17 Score=135.12 Aligned_cols=96 Identities=14% Similarity=0.055 Sum_probs=75.1
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------------------CCceEEeecccccCCCC
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------------------LEYFIVKDLNQDQKLEF 153 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------------------~~~~~~~d~~~~~~l~~ 153 (282)
++++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+.++|+ .++++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~---~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF---FALTA 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC---SSSTH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc---ccCCc
Confidence 4578899999999986543322 36799999999999975532 345777887 67776
Q ss_pred CC-CceeEEEecchhhccCC--HHHHHHHHHHcccCCcEEEEE
Q 023470 154 DH-CSFDAVVCAVSVQYLQQ--PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 154 ~~-~s~D~v~~~~~l~~~~~--~~~~l~~~~r~LkpgG~li~~ 193 (282)
++ ++||+|++..+++|++. ...++++++|+|||||++++.
T Consensus 97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 65 78999999999999974 345899999999999985544
No 41
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.65 E-value=2.4e-16 Score=130.17 Aligned_cols=111 Identities=19% Similarity=0.158 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhh-h-hcCCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLP-Q-EVSYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLE 152 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~-~-~~~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~ 152 (282)
..+..+...+. ...++.+|||+|||+|.... . ...+.+|+|+|+|+.|++.++. ...+...|+ .+++
T Consensus 9 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~ 84 (209)
T 2p8j_A 9 PQLYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDI---RKLP 84 (209)
T ss_dssp THHHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT---TSCC
T ss_pred hhHHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECch---hhCC
Confidence 34444444443 35577899999999876422 1 2266799999999999876542 345677777 6778
Q ss_pred CCCCceeEEEecchhhcc--CCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 153 FDHCSFDAVVCAVSVQYL--QQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~--~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++++||+|++..+++|+ .++..++++++++|||||.+++.+.+
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 888999999999999999 57788999999999999999998754
No 42
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.65 E-value=1.2e-16 Score=140.06 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=78.2
Q ss_pred CCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCCC--------------CceEEeecccc---cCC--CCCC
Q 023470 97 PGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPRL--------------EYFIVKDLNQD---QKL--EFDH 155 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~--------------~~~~~~d~~~~---~~l--~~~~ 155 (282)
++.+|||||||+|..+... .+..+|+|+|+|+.|++.|+.. ..+.+.++..+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4789999999998644322 2457999999999999876532 12445555322 111 3567
Q ss_pred CceeEEEecchhhcc---CCHHHHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 156 CSFDAVVCAVSVQYL---QQPEKVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~---~~~~~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
++||+|+|.+++||+ .+...++++++|+|||||+++++++++...
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~ 175 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKL 175 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 899999999999986 466789999999999999999999886443
No 43
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.65 E-value=3.6e-16 Score=136.00 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC------------CceEEeeccccc
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL------------EYFIVKDLNQDQ 149 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~------------~~~~~~d~~~~~ 149 (282)
+...+...+.. .++.+|||||||+|....... .+.+|+|+|+|+.|++.++.+ ..+...+. .
T Consensus 45 ~~~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~---~ 119 (293)
T 3thr_A 45 YKAWLLGLLRQ--HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW---L 119 (293)
T ss_dssp HHHHHHHHHHH--TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG---G
T ss_pred HHHHHHHHhcc--cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh---h
Confidence 33344444433 267899999999987544332 466999999999999766421 13445555 5
Q ss_pred CCC---CCCCceeEEEec-chhhccCC-------HHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 150 KLE---FDHCSFDAVVCA-VSVQYLQQ-------PEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 150 ~l~---~~~~s~D~v~~~-~~l~~~~~-------~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
.++ +++++||+|+|. .+++|+++ +..++++++++|||||++++++++.....
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 182 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYIL 182 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHH
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHh
Confidence 555 678999999999 89999999 89999999999999999999998865544
No 44
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.65 E-value=4.4e-16 Score=136.13 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=77.8
Q ss_pred CCCCeEEEeCCcccchh---hhh-cCCCeEEEEcCCHHHHHhCC----------CCCceEEeecccccCCCCCC------
Q 023470 96 RPGSEVLDLMSSWVSHL---PQE-VSYKRVVGHGLNAQELAKNP----------RLEYFIVKDLNQDQKLEFDH------ 155 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~-~~~~~v~giD~s~~~l~~~~----------~~~~~~~~d~~~~~~l~~~~------ 155 (282)
.++.+|||||||+|... +.. .++.+|+|+|+|+.|++.++ ....+.+.|+ +++++++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS---DDFKFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT---TCCGGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH---HhCCccccccccC
Confidence 47889999999988643 322 27899999999999987653 2446777887 6677666
Q ss_pred CceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEE
Q 023470 156 CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 192 (282)
++||+|++..++||+ ++..+++++.++|||||.+++
T Consensus 112 ~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 899999999999999 999999999999999999987
No 45
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.64 E-value=9.9e-16 Score=132.98 Aligned_cols=98 Identities=15% Similarity=0.225 Sum_probs=80.5
Q ss_pred CCCCCeEEEeCCcccchhhh---hcC-CCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EVS-YKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~~-~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|..... ..+ +.+|+|+|+|+.+++.++. +..+.+.|+ .++++ +++||+|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~~~-~~~fD~v~~ 95 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA---TEIEL-NDKYDIAIC 95 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCT---TTCCC-SSCEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcch---hhcCc-CCCeeEEEE
Confidence 35678999999998865433 334 5899999999999865432 345677777 66776 469999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++|++++..++++++++|||||.+++..++
T Consensus 96 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 96 HAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999999999999999999999998876
No 46
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.64 E-value=5e-16 Score=131.13 Aligned_cols=114 Identities=20% Similarity=0.288 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCC
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~ 154 (282)
+...+...+.....++.+|||+|||+|....... .+.+++|+|+|+.|++.++. ...+...|+ ..++++
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~ 99 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI---SNLNIN 99 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG---GGCCCS
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc---ccCCcc
Confidence 4455555665554577899999999887544332 36799999999999876542 345666776 566665
Q ss_pred CCceeEEEecc-hhhcc---CCHHHHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 155 HCSFDAVVCAV-SVQYL---QQPEKVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 155 ~~s~D~v~~~~-~l~~~---~~~~~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
++||+|++.. +++|+ .++..++++++++|||||.++++++++...
T Consensus 100 -~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 148 (246)
T 1y8c_A 100 -RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKL 148 (246)
T ss_dssp -CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred -CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHH
Confidence 8899999998 99999 567789999999999999999998876443
No 47
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.63 E-value=8.9e-16 Score=131.52 Aligned_cols=108 Identities=24% Similarity=0.295 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCce
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~ 158 (282)
....+...+...++++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..+++ +++|
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~f 111 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDM---RDFSL-GRRF 111 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCT---TTCCC-SCCE
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECCh---HHCCc-cCCc
Confidence 4455666677777788999999999987655443 46799999999999976643 456777887 66776 6899
Q ss_pred eEEEecc-hhhccC---CHHHHHHHHHHcccCCcEEEEEE
Q 023470 159 DAVVCAV-SVQYLQ---QPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 159 D~v~~~~-~l~~~~---~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|+|+|.. +++|++ +...++++++++|||||.++++.
T Consensus 112 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 112 SAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999998 999996 55578999999999999999973
No 48
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.63 E-value=6.3e-16 Score=128.25 Aligned_cols=99 Identities=22% Similarity=0.144 Sum_probs=80.3
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
++++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ .++ +++++||+|+++.+++|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~-~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW-TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC-CCSSCEEEEEEESCGGG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC-CCCCceeEEEEechhhc
Confidence 4567899999999886543322 36799999999999977653 335667776 555 67889999999999999
Q ss_pred cCCH--HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 170 LQQP--EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 170 ~~~~--~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++++ ..++++++++|||||.+++..+++
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9886 789999999999999999987765
No 49
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.63 E-value=3.3e-16 Score=136.22 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=75.2
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhh--hhcCCCeEEEEcCCHHHHHhCCCC---------------------------
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLP--QEVSYKRVVGHGLNAQELAKNPRL--------------------------- 137 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~--~~~~~~~v~giD~s~~~l~~~~~~--------------------------- 137 (282)
+...+.....++.+|||||||+|.... ....+.+|+|+|+|+.|++.+++.
T Consensus 61 l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (289)
T 2g72_A 61 LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140 (289)
T ss_dssp HHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCH
T ss_pred HHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccch
Confidence 334443322367899999999887322 222467999999999999754321
Q ss_pred -----------CceEEeecccccC-CC-----CCCCceeEEEecchhhc----cCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 138 -----------EYFIVKDLNQDQK-LE-----FDHCSFDAVVCAVSVQY----LQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 138 -----------~~~~~~d~~~~~~-l~-----~~~~s~D~v~~~~~l~~----~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
..+..+|+ .. ++ +++++||+|+|+++++| ++++..++++++|+|||||+|++..
T Consensus 141 ~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 141 QDKERQLRARVKRVLPIDV---HQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHHHHHHHEEEEECCCT---TSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhHHHHHhhhceEEeccc---CCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 01223355 33 44 34577999999999999 6678899999999999999999873
No 50
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=7.9e-16 Score=131.22 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=82.1
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCC---CCCceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNP---RLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~---~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
.++.+|||+|||+|... +...++.+|+|+|+|+.|++.++ ....+...|+ ..++ ++++||+|+++.+++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADL---ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCT---TTCC-CSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECCh---hhcC-ccCCcCEEEEeCchhh
Confidence 46789999999988643 33335789999999999997664 3456777777 6666 6789999999999999
Q ss_pred cCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 170 LQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 170 ~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++++..++++++++|||||.+++.+++.
T Consensus 108 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 108 VPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp STTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 9999999999999999999999998754
No 51
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.63 E-value=7.2e-16 Score=128.43 Aligned_cols=97 Identities=18% Similarity=0.222 Sum_probs=76.3
Q ss_pred CCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCCceeE
Q 023470 97 PGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
++.+|||||||+|....... +..+|+|+|+|+.+++.++. ...+..+|+ ..++.++++||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~ 105 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL---VYRDKRFSGYDA 105 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS---SSCCGGGTTCSE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc---cccccccCCCCE
Confidence 67899999999887554332 44799999999999976543 345666676 566666789999
Q ss_pred EEecchhhccCCH--HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|++..+++|++++ ..+++++.++|||||.+ +.+++.
T Consensus 106 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~-i~~~~~ 143 (219)
T 3jwg_A 106 ATVIEVIEHLDENRLQAFEKVLFEFTRPQTVI-VSTPNK 143 (219)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEE-EEEEBG
T ss_pred EEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEE-EEccch
Confidence 9999999999866 68999999999999954 444553
No 52
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=1.1e-15 Score=124.14 Aligned_cols=105 Identities=21% Similarity=0.259 Sum_probs=82.2
Q ss_pred HHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEEEec-
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAVVCA- 164 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~- 164 (282)
++...++++.+|||+|||.|....... .+.+++|+|+|+.+++.++. ...+...|+ ..+++++++||+|++.
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDL---SVDQISETDFDLIVSAG 115 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCT---TTSCCCCCCEEEEEECC
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEccc---ccCCCCCCceeEEEECC
Confidence 444557788999999999886543322 36799999999999876543 345667777 5667778899999999
Q ss_pred chhhccC--CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 165 VSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 165 ~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+++|+. +...+++++.++|||||.+++.+++.
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 7888884 44779999999999999999987653
No 53
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.62 E-value=6.3e-16 Score=134.91 Aligned_cols=101 Identities=20% Similarity=0.387 Sum_probs=75.5
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC------------------------------------
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL------------------------------------ 137 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~------------------------------------ 137 (282)
++.+|||||||+|... +...+..+|+|+|+|+.|++.++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999988643 3334678999999999999765422
Q ss_pred ------------------------------CceEEeeccccc--CCCCCCCceeEEEecchhhccC------CHHHHHHH
Q 023470 138 ------------------------------EYFIVKDLNQDQ--KLEFDHCSFDAVVCAVSVQYLQ------QPEKVFAE 179 (282)
Q Consensus 138 ------------------------------~~~~~~d~~~~~--~l~~~~~s~D~v~~~~~l~~~~------~~~~~l~~ 179 (282)
..+..+|+.... .+++.+++||+|+|..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 234445542110 1234678999999999998885 77789999
Q ss_pred HHHcccCCcEEEEEEcCc
Q 023470 180 VFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 180 ~~r~LkpgG~li~~~~~~ 197 (282)
++++|||||+|+++....
T Consensus 206 ~~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPW 223 (292)
T ss_dssp HHHHEEEEEEEEEECCCH
T ss_pred HHHHhCCCcEEEEecCCc
Confidence 999999999999985543
No 54
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=6.4e-16 Score=128.41 Aligned_cols=98 Identities=15% Similarity=0.227 Sum_probs=78.4
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ .+++ ++++||+|+++.+++|
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDI---LQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT---TTCC-CSCCEEEEEEESCGGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcch---hhCC-CCCCccEEEEccHHHh
Confidence 56789999999887544332 35699999999999875542 235667777 5565 5789999999999999
Q ss_pred cCCHH---HHHHHHHHcccCCcEEEEEEcCch
Q 023470 170 LQQPE---KVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 170 ~~~~~---~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+++++ .+++++.++|||||.++++++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 99884 579999999999999999887653
No 55
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=7.9e-16 Score=129.67 Aligned_cols=105 Identities=18% Similarity=0.149 Sum_probs=80.1
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCC
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHC 156 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~ 156 (282)
+...+.....++.+|||+|||+|....... .+.+|+|+|+|+.+++.++.. ..+..+|+ ..++ +++
T Consensus 56 l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~-~~~ 131 (235)
T 3lcc_A 56 IVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDV---FTWR-PTE 131 (235)
T ss_dssp HHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCT---TTCC-CSS
T ss_pred HHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECch---hcCC-CCC
Confidence 333444333355699999999987554433 678999999999998755421 34666666 5555 456
Q ss_pred ceeEEEecchhhccC--CHHHHHHHHHHcccCCcEEEEEEc
Q 023470 157 SFDAVVCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 157 s~D~v~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+||+|++..+++|++ +...+++++.++|||||.+++...
T Consensus 132 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 899999999999998 888999999999999999998654
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.62 E-value=4.9e-16 Score=131.51 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=78.0
Q ss_pred CCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCCCCCCCceeEEEecch
Q 023470 97 PGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
++.+|||||||+|....... ...+|+|+|+|+.|++.++.. ..+...|+ ..+++++++||+|++..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL---QDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG---GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh---hhcCCCCCCEEEEEEcch
Confidence 47899999999987554332 356999999999999765432 24566666 667777789999999999
Q ss_pred hhccCCHH--HHHHHHHHcccCCcEEEEEEcC
Q 023470 167 VQYLQQPE--KVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 167 l~~~~~~~--~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++|++++. .+++++.++|||||.+++..+.
T Consensus 156 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 156 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 99998855 8999999999999999997654
No 57
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=5.8e-16 Score=136.27 Aligned_cols=115 Identities=22% Similarity=0.276 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC---------------CCceEEee
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR---------------LEYFIVKD 144 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~---------------~~~~~~~d 144 (282)
..+..+...+...++++.+|||+|||+|...... .+..+|+|+|+|+.|++.++. ...+.+.|
T Consensus 19 ~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 19 VLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 4555555555555567889999999988754432 257799999999999876542 23566777
Q ss_pred cccccCCC----C--CCCceeEEEecchhhcc-CC---HHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 145 LNQDQKLE----F--DHCSFDAVVCAVSVQYL-QQ---PEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 145 ~~~~~~l~----~--~~~s~D~v~~~~~l~~~-~~---~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
+ ..++ + ++++||+|+|++++||+ .+ +..++++++++|||||.+++++++...
T Consensus 99 ~---~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 160 (313)
T 3bgv_A 99 S---SKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE 160 (313)
T ss_dssp T---TTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH
T ss_pred c---cccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH
Confidence 7 4443 4 34689999999999998 44 467999999999999999999988643
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.8e-15 Score=126.38 Aligned_cols=112 Identities=32% Similarity=0.345 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCC-------CCCceEEeecccccCCCCC
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNP-------RLEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~-------~~~~~~~~d~~~~~~l~~~ 154 (282)
..+.+.+.+.+.++++.+|||+|||+|....... .+.+++|+|+|+.+++.++ ....+...|+ ..++++
T Consensus 24 ~~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~ 100 (227)
T 1ve3_A 24 RIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKLSFE 100 (227)
T ss_dssp HHHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSCCSC
T ss_pred HHHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECch---hcCCCC
Confidence 3445566666777788999999999886543322 3459999999999986554 2346777777 667777
Q ss_pred CCceeEEEecch--hhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 155 HCSFDAVVCAVS--VQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 155 ~~s~D~v~~~~~--l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++||+|+++.+ ++|..++..++++++++|||||.+++..++.
T Consensus 101 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 889999999999 6666678889999999999999999987763
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.61 E-value=2.4e-15 Score=131.58 Aligned_cols=96 Identities=17% Similarity=0.326 Sum_probs=75.8
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ .++ +++||+|++
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~---~~~fD~v~~ 143 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEF---DEPVDRIVS 143 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGC---CCCCSEEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCH---HHc---CCCccEEEE
Confidence 4578899999999886543322 14899999999999876542 234666666 444 689999999
Q ss_pred cchhhccCCH---------HHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQP---------EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~---------~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+.+++|++++ ..+++++.++|||||++++....
T Consensus 144 ~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 144 LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999999776 78999999999999999987553
No 60
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.61 E-value=8e-16 Score=131.46 Aligned_cols=95 Identities=11% Similarity=0.069 Sum_probs=74.6
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCC-------------------------CCCceEEeeccccc
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNP-------------------------RLEYFIVKDLNQDQ 149 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~-------------------------~~~~~~~~d~~~~~ 149 (282)
.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++ ....+.++|+ .
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~---~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI---F 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT---T
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc---c
Confidence 467899999999887543322 5679999999999997542 1235667777 6
Q ss_pred CCCCCC-CceeEEEecchhhccC--CHHHHHHHHHHcccCCcEEEEE
Q 023470 150 KLEFDH-CSFDAVVCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 150 ~l~~~~-~s~D~v~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+++..+ ++||+|++..+++|++ +...+++++.|+|||||++++.
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 777654 8999999999999996 3456999999999999999644
No 61
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.61 E-value=1.3e-15 Score=128.54 Aligned_cols=112 Identities=21% Similarity=0.279 Sum_probs=87.0
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCc
Q 023470 85 STLTNLYRQMLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 85 ~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s 157 (282)
..+...+...++++.+|||+|||+|..........+|+|+|+|+.|++.++. ...+...|+ ..++++ ++
T Consensus 21 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~-~~ 96 (243)
T 3d2l_A 21 PEWVAWVLEQVEPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDM---RELELP-EP 96 (243)
T ss_dssp HHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCG---GGCCCS-SC
T ss_pred HHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcCh---hhcCCC-CC
Confidence 3455556667778899999999998765444333899999999999876542 345667776 556665 78
Q ss_pred eeEEEecc-hhhccC---CHHHHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 158 FDAVVCAV-SVQYLQ---QPEKVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 158 ~D~v~~~~-~l~~~~---~~~~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
||+|++.. +++|+. +...+++++.++|||||.++++++++...
T Consensus 97 fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 143 (243)
T 3d2l_A 97 VDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKM 143 (243)
T ss_dssp EEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred cCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHH
Confidence 99999987 999994 55679999999999999999998876443
No 62
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.61 E-value=2.6e-15 Score=124.16 Aligned_cols=110 Identities=26% Similarity=0.317 Sum_probs=86.0
Q ss_pred HHHHHHHhhCCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCc
Q 023470 86 TLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 86 ~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s 157 (282)
.+...+...+.++.+|||+|||.|....... ...+|+|+|+|+.+++.++. ...+...|+ ..+++++++
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~~~~~~~ 107 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKLDFPSAS 107 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSCCSCSSC
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcCCCCCCc
Confidence 3556666677788999999999886543322 23389999999999865542 345677777 667788889
Q ss_pred eeEEEecchhhccC---------------CHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 158 FDAVVCAVSVQYLQ---------------QPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 158 ~D~v~~~~~l~~~~---------------~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
||+|++..+++|+. +...+++++.++|||||.+++..++..
T Consensus 108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 99999999987765 567899999999999999999887753
No 63
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.61 E-value=1.1e-15 Score=132.68 Aligned_cols=97 Identities=19% Similarity=0.342 Sum_probs=76.3
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ .+++ ++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~---~~fD~v~~ 135 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFD---EPVDRIVS 135 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCC---CCCSEEEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh---hhCC---CCeeEEEE
Confidence 4567899999999886443221 24699999999999875542 234556665 4454 78999999
Q ss_pred cchhhcc--CCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 164 AVSVQYL--QQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~--~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
..+++|+ .++..++++++++|||||.+++..+..
T Consensus 136 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 136 IGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred eCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 9999999 688999999999999999999987654
No 64
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.60 E-value=1.5e-15 Score=126.46 Aligned_cols=102 Identities=14% Similarity=0.084 Sum_probs=78.2
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCC-CCceeEEEecchhhccCC
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFD-HCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~-~~s~D~v~~~~~l~~~~~ 172 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.|++.++.. ..+...++......++. +++||+|+++.+++ ..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~ 130 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQD 130 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-hhh
Confidence 56899999999887544332 467999999999999766543 45666665321122433 44599999999999 789
Q ss_pred HHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
+..++++++++|||||.+++.++++..
T Consensus 131 ~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 131 IIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 999999999999999999999887633
No 65
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.60 E-value=1.4e-15 Score=132.17 Aligned_cols=107 Identities=21% Similarity=0.265 Sum_probs=83.2
Q ss_pred HhhCCCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCC-CCCcee
Q 023470 92 RQMLRPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEF-DHCSFD 159 (282)
Q Consensus 92 ~~~~~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~-~~~s~D 159 (282)
...+.++.+|||+|||+|...... .+..+|+|+|+|+.|++.++.. ..+..+|+ ..+++ ++++||
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~fD 135 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS---YGRHMDLGKEFD 135 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT---TTSCCCCSSCEE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCc---cccccCCCCCcC
Confidence 345678899999999988644332 2556999999999998755421 35566666 56666 578999
Q ss_pred EEEecchhhc----cCCHHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 160 AVVCAVSVQY----LQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 160 ~v~~~~~l~~----~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
+|++.+++|| ..++..+++++.++|||||.+++++++.....
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 181 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVIL 181 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHH
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 9999999987 45677899999999999999999998865433
No 66
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=4.5e-16 Score=131.73 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=72.7
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCceeEEEe--
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSFDAVVC-- 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~D~v~~-- 163 (282)
..++.+|||||||+|....... ...+++|||+|+.|++.+++. ..+..++... ...++++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWED-VAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHH-HGGGSCTTCEEEEEECC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHh-hcccccccCCceEEEee
Confidence 3578899999999886543332 346899999999999776532 1233344311 233567889999974
Q ss_pred ---cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 ---AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ---~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.++++|..+.+.++++++|+|||||+|++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 577888889999999999999999999864
No 67
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.58 E-value=6.9e-15 Score=122.11 Aligned_cols=96 Identities=22% Similarity=0.189 Sum_probs=77.7
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecch
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
+...+.. ..++.+|||+|||+|...... ..+|+|+|+|+. ...+...|+ .++++++++||+|++..+
T Consensus 58 ~~~~l~~-~~~~~~vLDiG~G~G~~~~~l--~~~v~~~D~s~~-------~~~~~~~d~---~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 58 IARDLRQ-RPASLVVADFGCGDCRLASSI--RNPVHCFDLASL-------DPRVTVCDM---AQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp HHHHHHT-SCTTSCEEEETCTTCHHHHHC--CSCEEEEESSCS-------STTEEESCT---TSCSCCTTCEEEEEEESC
T ss_pred HHHHHhc-cCCCCeEEEECCcCCHHHHHh--hccEEEEeCCCC-------CceEEEecc---ccCCCCCCCEeEEEEehh
Confidence 4444432 356789999999998766553 379999999987 446777887 667888899999999999
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+|+ .++..++++++++|||||.+++....
T Consensus 125 l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ccc-cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 975 89999999999999999999998653
No 68
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.58 E-value=1.3e-15 Score=125.22 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=76.4
Q ss_pred hCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
.++++ +|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ ..+++++++||+|++++
T Consensus 27 ~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 27 QIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL---ADFDIVADAWEGIVSIF 102 (202)
T ss_dssp HSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT---TTBSCCTTTCSEEEEEC
T ss_pred hCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh---hhcCCCcCCccEEEEEh
Confidence 35566 99999999886543322 46799999999999876543 234556666 66777788999999965
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
...+..+...+++++.++|||||.+++.+++..
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 432234677899999999999999999987653
No 69
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.57 E-value=8e-15 Score=125.95 Aligned_cols=163 Identities=15% Similarity=0.118 Sum_probs=104.9
Q ss_pred cccCCCCcCCccccccccccccCchhhcccCCCCCcccccccccc-cccchhHHHHHHHHHHhhC-CCCCeEEEeCCccc
Q 023470 32 TLNDSNNETKQSSAGKIKREVLTNEGRTKLNTYSDRDFYAYPRFV-THVDGGFISTLTNLYRQML-RPGSEVLDLMSSWV 109 (282)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~~ 109 (282)
.+.|.+.+......+++.+.........+...+....+.....+. ..+-..+...+...+...+ .++.+|||+|||+|
T Consensus 18 ~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G 97 (269)
T 1p91_A 18 SYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEG 97 (269)
T ss_dssp EEECTTCCEEEBCTTSCEECSCSSSSCSCCCSSSHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHSCTTCCEEEEETCTTS
T ss_pred EEECCCCCcCCcCCCEEEEeecccccCCCCCCCCHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 466776666666666666654433322222222222221222221 1111234445555555555 57889999999987
Q ss_pred chhhh---hcCCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEEEecchhhccCCHHHHHHHHHHc
Q 023470 110 SHLPQ---EVSYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRV 183 (282)
Q Consensus 110 ~~~~~---~~~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~ 183 (282)
..... ..++.+|+|+|+|+.|++.++. ...+...|. ..+++++++||+|+++++.. .++++.++
T Consensus 98 ~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~ 167 (269)
T 1p91_A 98 YYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRLPFSDTSMDAIIRIYAPC-------KAEELARV 167 (269)
T ss_dssp TTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT---TSCSBCTTCEEEEEEESCCC-------CHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhCCCCCCceeEEEEeCChh-------hHHHHHHh
Confidence 65433 2347899999999999976653 235677776 67888889999999987633 47999999
Q ss_pred ccCCcEEEEEEcCchhHHHHH
Q 023470 184 LKPGGVFIVSFSNRMFYEKAI 204 (282)
Q Consensus 184 LkpgG~li~~~~~~~~~~~~~ 204 (282)
|||||.+++.+++.....+..
T Consensus 168 L~pgG~l~~~~~~~~~~~~~~ 188 (269)
T 1p91_A 168 VKPGGWVITATPGPRHLMELK 188 (269)
T ss_dssp EEEEEEEEEEEECTTTTHHHH
T ss_pred cCCCcEEEEEEcCHHHHHHHH
Confidence 999999999988875544433
No 70
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.57 E-value=2e-15 Score=128.29 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=78.0
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
.++.+|||||||+|....... ...+|+|+|+|+.|++.++. ...+...|+ ..+++++++||+|++..++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l 168 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASM---ETATLPPNTYDLIVIQWTA 168 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG---GGCCCCSSCEEEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccH---HHCCCCCCCeEEEEEcchh
Confidence 357899999999886543321 25689999999999876542 235566666 6677888899999999999
Q ss_pred hccC--CHHHHHHHHHHcccCCcEEEEEEc
Q 023470 168 QYLQ--QPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 168 ~~~~--~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+|++ ++..++++++++|||||.+++..+
T Consensus 169 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 169 IYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9995 578899999999999999999875
No 71
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.57 E-value=6.2e-15 Score=129.84 Aligned_cols=96 Identities=18% Similarity=0.350 Sum_probs=75.8
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ .+++ ++||+|++.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~---~~fD~v~~~ 162 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFA---EPVDRIVSI 162 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCC---CCCSEEEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh---HHCC---CCcCEEEEe
Confidence 467899999999886543322 15799999999999876542 234556665 4443 789999999
Q ss_pred chhhcc--CCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 165 VSVQYL--QQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 165 ~~l~~~--~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+++|+ +++..+++++.++|||||.+++..+..
T Consensus 163 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 163 EAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp SCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred ChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 999999 688999999999999999999987653
No 72
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2.4e-15 Score=127.41 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=76.2
Q ss_pred hhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-----CCceEEeecccccCCCCCC-----CceeEE
Q 023470 93 QMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-----LEYFIVKDLNQDQKLEFDH-----CSFDAV 161 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-----~~~~~~~d~~~~~~l~~~~-----~s~D~v 161 (282)
..+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+.+.|+ .+++... .+||+|
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDG---LVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCT---TCHHHHHHHHHHHCSCEE
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcc---cccccccccccccCccEE
Confidence 345678899999999886543332 23499999999999976542 345666676 4433211 249999
Q ss_pred EecchhhccC--CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 162 VCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 162 ~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++..+++|++ +...++++++++|||||++++....
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999999998 7889999999999999998776554
No 73
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.56 E-value=3.4e-15 Score=125.67 Aligned_cols=109 Identities=25% Similarity=0.314 Sum_probs=82.7
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCcee
Q 023470 84 ISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 84 ~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
...+...+...+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+ ..+++ +++||
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~~D 102 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDM---RDFRL-GRKFS 102 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCT---TTCCC-SSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCH---HHccc-CCCCc
Confidence 334555666666778999999999886543322 23489999999999976653 346677777 56666 67899
Q ss_pred EEEecc-hhhccCC---HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 160 AVVCAV-SVQYLQQ---PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 160 ~v~~~~-~l~~~~~---~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+|+|.+ +++|+.+ ...++++++++|||||.++++..+
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999654 9999954 467999999999999999998644
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=5.6e-15 Score=120.75 Aligned_cols=94 Identities=23% Similarity=0.225 Sum_probs=75.6
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ ..+++ +++||+|++..++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDL---NNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCG---GGCCC-CCCEEEEEEESCG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcch---hhCCC-CCCceEEEEcchh
Confidence 56799999999886443322 36799999999999876542 345666776 56666 7899999999999
Q ss_pred hccC--CHHHHHHHHHHcccCCcEEEEEE
Q 023470 168 QYLQ--QPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 168 ~~~~--~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
+|++ +...+++++.++|||||.+++..
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9998 78899999999999999987654
No 75
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=2e-14 Score=124.29 Aligned_cols=101 Identities=18% Similarity=0.151 Sum_probs=76.3
Q ss_pred CCCeEEEeCCcc---cchhh---hhcCCCeEEEEcCCHHHHHhCCC------CCceEEeecccccC--------CCCCCC
Q 023470 97 PGSEVLDLMSSW---VSHLP---QEVSYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQK--------LEFDHC 156 (282)
Q Consensus 97 ~~~~vLDiGcG~---~~~~~---~~~~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~--------l~~~~~ 156 (282)
...+|||||||+ |.... ...++.+|+|+|+|+.|++.++. ...+..+|+..... -.++..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 347899999999 86432 22367899999999999976542 34567777732100 012235
Q ss_pred ceeEEEecchhhccCC--HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 157 SFDAVVCAVSVQYLQQ--PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 157 s~D~v~~~~~l~~~~~--~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+||+|+++.++||+++ +..++++++++|||||+|+++....
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999999999987 7889999999999999999986554
No 76
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.56 E-value=1.3e-15 Score=122.66 Aligned_cols=85 Identities=18% Similarity=0.232 Sum_probs=72.3
Q ss_pred CCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCC---CCCceeEEEecchh
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEF---DHCSFDAVVCAVSV 167 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~---~~~s~D~v~~~~~l 167 (282)
++++.+|||+|||. +++|+|+.|++.++. ...+.++|+ .++++ ++++||+|+|++++
T Consensus 10 ~~~g~~vL~~~~g~-------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~---~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-------------SPVEALKGLVDKLQALTGNEGRVSVENI---KQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT-------------SCHHHHHHHHHHHHHHTTTTSEEEEEEG---GGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc-------------eeeeCCHHHHHHHHHhcccCcEEEEech---hcCccccCCCCCEeEEEECChh
Confidence 56889999999985 239999999976542 357788888 56666 78999999999999
Q ss_pred hcc-CCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 168 QYL-QQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 168 ~~~-~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
||+ +++..++++++|+|||||++++..+
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 999 9999999999999999999999644
No 77
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=1.9e-14 Score=125.67 Aligned_cols=101 Identities=21% Similarity=0.208 Sum_probs=78.5
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-----------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-----------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-----------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ .++++ +++||+|++
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~---~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDM---SAFAL-DKRFGTVVI 156 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBT---TBCCC-SCCEEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCch---hcCCc-CCCcCEEEE
Confidence 445699999999887554332 46799999999999976542 345778887 66776 689999997
Q ss_pred c-chhhccC--CHHHHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 164 A-VSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 164 ~-~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
. .+++|++ +...++++++++|||||.|++.++++...
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 6 5666665 35779999999999999999998876543
No 78
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.53 E-value=2.9e-14 Score=137.14 Aligned_cols=112 Identities=15% Similarity=0.227 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-C---CCeEEEEcCCHHHHHhCCC--------------CCceEEee
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-S---YKRVVGHGLNAQELAKNPR--------------LEYFIVKD 144 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~---~~~v~giD~s~~~l~~~~~--------------~~~~~~~d 144 (282)
.++.+.+.+... ++.+|||||||+|....... . ..+|+|+|+|+.|++.++. ...+.++|
T Consensus 709 Rle~LLelL~~~--~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 709 RVEYALKHIRES--SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHS--CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHhccc--CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 344444444332 77899999999987655443 2 2699999999999976643 23567777
Q ss_pred cccccCCCCCCCceeEEEecchhhccCCHH--HHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 145 LNQDQKLEFDHCSFDAVVCAVSVQYLQQPE--KVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 145 ~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~--~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
+ ..+++.+++||+|++..+++|++++. .++++++|+|||| .+++++|+..+.
T Consensus 787 a---~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN 840 (950)
T 3htx_A 787 I---LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFN 840 (950)
T ss_dssp T---TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGH
T ss_pred h---HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhh
Confidence 7 77888889999999999999998766 4999999999999 999999886543
No 79
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.53 E-value=7.9e-15 Score=125.31 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=73.2
Q ss_pred CCCCeEEEeCCcccchhhhhc-CC-CeEEEEcCCHHHHHhCCC----C--------------------------------
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SY-KRVVGHGLNAQELAKNPR----L-------------------------------- 137 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~-~~v~giD~s~~~l~~~~~----~-------------------------------- 137 (282)
.++.+|||+|||+|....... .+ .+|+|+|+|+.|++.++. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 456789999999876543322 33 489999999999876531 1
Q ss_pred -C-ceEEeecccccCC-CCCC---CceeEEEecchhh----ccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 138 -E-YFIVKDLNQDQKL-EFDH---CSFDAVVCAVSVQ----YLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 138 -~-~~~~~d~~~~~~l-~~~~---~s~D~v~~~~~l~----~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
. .+..+|+ ... ++++ ++||+|++.++++ +++++..++++++++|||||.+++...
T Consensus 135 ~v~~~~~~d~---~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 135 AIKQVLKCDV---TQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HEEEEEECCT---TSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hheeEEEeee---ccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 2 4566666 333 3344 8999999999999 555778899999999999999998864
No 80
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.52 E-value=2.6e-14 Score=123.87 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=75.2
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ ..+++ +++||+|+++.+++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDI---NAANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCG---GGCCC-CSCEEEEEECSSGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecc---ccccc-cCCccEEEEccchh
Confidence 77899999999886543322 46799999999999875542 345667777 55555 78999999999999
Q ss_pred ccCC--HHHHHHHHHHcccCCcEEEEEEc
Q 023470 169 YLQQ--PEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 169 ~~~~--~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|+++ ...+++++.++|||||.+++...
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9964 45899999999999999877643
No 81
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.52 E-value=6.5e-15 Score=124.29 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=71.0
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCC--CCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKL--EFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l--~~~~~s~D~v~~ 163 (282)
..++.+|||||||+|....... ...+|+|+|+|+.|++.++.. ..+..+|. .++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW---EDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH---HHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCH---HHhhcccCCCceEEEEE
Confidence 4577899999999987544332 344899999999998765432 24455555 555 788899999999
Q ss_pred -cchh--h--ccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 164 -AVSV--Q--YLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 164 -~~~l--~--~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
.+++ + |..+.+.++++++|+|||||++++..
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 5554 1 22234468999999999999998763
No 82
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=2.5e-14 Score=115.87 Aligned_cols=110 Identities=15% Similarity=0.168 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC-
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE- 152 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~- 152 (282)
.......++...++++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. +..+...+. ..++
T Consensus 8 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~---~~l~~ 84 (185)
T 3mti_A 8 PIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGH---ENLDH 84 (185)
T ss_dssp HHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG---GGGGG
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH---HHHHh
Confidence 4444555666778889999999999886543322 37899999999999976542 223444333 3332
Q ss_pred CCCCceeEEEecc-hhhc--------cCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 153 FDHCSFDAVVCAV-SVQY--------LQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 153 ~~~~s~D~v~~~~-~l~~--------~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.+++||+|+++. .+++ ..+...+++++.++|||||++++.+.
T Consensus 85 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 85 YVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp TCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4468899999884 2222 12345689999999999999998753
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=2.8e-14 Score=122.17 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=73.9
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCC--ceEEeecccccCCCC-----CCCceeEEEecch
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLE--YFIVKDLNQDQKLEF-----DHCSFDAVVCAVS 166 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~--~~~~~d~~~~~~l~~-----~~~s~D~v~~~~~ 166 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.|++.++.+. .....+. .+++. .+++||+|+++.+
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~---~~~~~~~~~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDL---LDITAEIPKELAGHFDFVLNDRL 119 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEE---CCTTSCCCGGGTTCCSEEEEESC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccceeee---eecccccccccCCCccEEEEhhh
Confidence 4578899999999986543322 5789999999999997665322 1334444 22222 2578999999999
Q ss_pred hhccC--CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 167 VQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 167 l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++|+. +...+++++.++| |||++++++...
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 99985 4556999999999 999999997654
No 84
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.50 E-value=1.1e-14 Score=117.68 Aligned_cols=107 Identities=11% Similarity=0.103 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC------CC-ceEEeecccccCCCC
Q 023470 84 ISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR------LE-YFIVKDLNQDQKLEF 153 (282)
Q Consensus 84 ~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~------~~-~~~~~d~~~~~~l~~ 153 (282)
++.+...+...+++..+|||+|||+|...... .+..+|+|+|+|+.|++.++. .. ++.+.|. ... .
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~---~~~-~ 111 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNK---ESD-V 111 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECC---HHH-H
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecc---ccc-C
Confidence 33444445556778899999999988654443 578899999999999976542 22 3455554 222 3
Q ss_pred CCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 154 DHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.++||+|++..++||+++.+..+..+++.|||||.+| ++|
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfI-Sfp 152 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVI-SFP 152 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEE-EEE
T ss_pred CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEE-EeC
Confidence 56889999999999999666678889999999998765 444
No 85
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.49 E-value=2.2e-14 Score=119.42 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=74.5
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHh----CC------C--CCceEEeecccccCCCCCCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAK----NP------R--LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~----~~------~--~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
..++.+|||+|||+|... +...++.+|+|+|+|+.|++. ++ . +..+..+|+ .++++++++ |
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~---~~l~~~~~~-d 100 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA---ERLPPLSGV-G 100 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS---TTCCSCCCE-E
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch---hhCCCCCCC-C
Confidence 457789999999988643 343457899999999998764 11 1 235677777 678887766 6
Q ss_pred EEEec---chh--hccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 160 AVVCA---VSV--QYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 160 ~v~~~---~~l--~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.|... ..+ +|++++..++++++|+|||||.+++++...
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLH 143 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccc
Confidence 66643 334 388899999999999999999999986543
No 86
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.49 E-value=4.6e-14 Score=121.72 Aligned_cols=94 Identities=19% Similarity=0.327 Sum_probs=70.6
Q ss_pred CCCeEEEeCCcccch-------hhhhcC----CCeEEEEcCCHHHHHhCCCC----------------------------
Q 023470 97 PGSEVLDLMSSWVSH-------LPQEVS----YKRVVGHGLNAQELAKNPRL---------------------------- 137 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~-------~~~~~~----~~~v~giD~s~~~l~~~~~~---------------------------- 137 (282)
+..+|||+|||+|.. ++...+ +.+|+|+|+|++||+.|+..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 457899999999862 222223 46999999999999876532
Q ss_pred -----------CceEEeecccccCCCCC-CCceeEEEecchhhccCCH--HHHHHHHHHcccCCcEEEEE
Q 023470 138 -----------EYFIVKDLNQDQKLEFD-HCSFDAVVCAVSVQYLQQP--EKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 138 -----------~~~~~~d~~~~~~l~~~-~~s~D~v~~~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~ 193 (282)
..|...|+ .+.+++ .++||+|+|.++++|+++. .+++++++++|||||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl---~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNL---LEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCT---TCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEeccc---CCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 12334444 333444 5789999999999999755 67999999999999999985
No 87
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.49 E-value=3.6e-13 Score=107.98 Aligned_cols=103 Identities=20% Similarity=0.105 Sum_probs=78.8
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecc
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
+.+.+.....++.+|||+|||+|....... .+ +|+|+|+|+.|++. .....+..+|+ .+ ++++++||+|+++.
T Consensus 13 l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-~~~~~~~~~d~---~~-~~~~~~fD~i~~n~ 86 (170)
T 3q87_B 13 LMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-HRGGNLVRADL---LC-SINQESVDVVVFNP 86 (170)
T ss_dssp HHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-CSSSCEEECST---TT-TBCGGGCSEEEECC
T ss_pred HHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-ccCCeEEECCh---hh-hcccCCCCEEEECC
Confidence 444444333467799999999987654443 34 99999999999998 44567788887 34 55568999999998
Q ss_pred hhhccCCH---------HHHHHHHHHcccCCcEEEEEEcC
Q 023470 166 SVQYLQQP---------EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 166 ~l~~~~~~---------~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.+++.++. ..+++++.+.| |||.+++..+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 87 PYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 88876554 56899999999 99999998654
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=1.4e-13 Score=116.78 Aligned_cols=107 Identities=29% Similarity=0.419 Sum_probs=77.4
Q ss_pred HHHHHHhhC-CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCc
Q 023470 87 LTNLYRQML-RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 87 ~~~~~~~~~-~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s 157 (282)
+...+.... .++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ .+++++ ++
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~---~~~~~~-~~ 105 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV---LEIAFK-NE 105 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG---GGCCCC-SC
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECCh---hhcccC-CC
Confidence 334444332 356899999999887543322 46799999999999876542 245677777 556654 68
Q ss_pred eeEEEecc-hhhccC--CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 158 FDAVVCAV-SVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 158 ~D~v~~~~-~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
||+|++.+ +++|.. +...++++++++|||||.+++++++.
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 148 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCW 148 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccch
Confidence 99999875 444543 55679999999999999999988763
No 89
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.46 E-value=1.7e-13 Score=118.69 Aligned_cols=95 Identities=16% Similarity=0.130 Sum_probs=74.3
Q ss_pred hCCCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 94 MLRPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
.++++.+|||||||+|.. +.....+++|+|+|+|++|++.|++ +..+..+|. .+++ +++||+|+
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~~l~--d~~FDvV~ 193 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---TVID--GLEFDVLM 193 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---GGGG--GCCCSEEE
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---hhCC--CCCcCEEE
Confidence 467899999999997642 2233468899999999999977653 234566666 4554 68999999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+... +++..+++++++|+|||||++++...+
T Consensus 194 ~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 194 VAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 8654 578999999999999999999987643
No 90
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.46 E-value=1.1e-13 Score=116.34 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=74.6
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhC----CC--CCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKN----PR--LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~----~~--~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
++|+.+|||+|||+|... +... +..+|+|+|+|++|++.+ ++ +...+..+.......++..+++|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 568999999999987643 3332 678999999999998543 22 2344555554434556677899999875
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
. .|..+...++.+++++|||||++++++..
T Consensus 155 ~--~~~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 155 V--AQPEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp C--CCTTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c--cCChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 4 45567788999999999999999998643
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.46 E-value=2.7e-14 Score=119.30 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccC-CC--CCCCceeEEE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQK-LE--FDHCSFDAVV 162 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~-l~--~~~~s~D~v~ 162 (282)
++.+|||||||+|... +...+..+|+|+|+|+.|++.++. +..+..+|+ .+ ++ +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da---~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA---VEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCH---HHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCH---HHHHHHHcCCCChheEE
Confidence 5678999999988654 334477899999999999865432 234555555 33 23 6789999999
Q ss_pred ecchhhccCCH--------HHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhh
Q 023470 163 CAVSVQYLQQP--------EKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAW 207 (282)
Q Consensus 163 ~~~~l~~~~~~--------~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~ 207 (282)
+++...+.... ..++++++|+|||||.+++.+.+..+........
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~ 163 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVM 163 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHH
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH
Confidence 98654433221 2599999999999999999987765555444333
No 92
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.45 E-value=1.5e-13 Score=109.67 Aligned_cols=98 Identities=19% Similarity=0.234 Sum_probs=75.8
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC--------CCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE--------FDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~--------~~~~s~D~v~ 162 (282)
+.++.+|||+|||+|... +... +..+++|+|+|+ +++. ....+...|+ .+.+ +++++||+|+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--~~~~~~~~d~---~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--VGVDFLQGDF---RDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--TTEEEEESCT---TSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--CcEEEEEccc---ccchhhhhhhccCCCCceeEEE
Confidence 457889999999987643 3332 458999999999 7654 3345666666 4444 6678999999
Q ss_pred ecchhhccCCH-----------HHHHHHHHHcccCCcEEEEEEcCch
Q 023470 163 CAVSVQYLQQP-----------EKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 163 ~~~~l~~~~~~-----------~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+..++++..+. ..+++++.++|||||.+++..+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 99998888766 6899999999999999999876543
No 93
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.44 E-value=5.5e-14 Score=117.84 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=73.5
Q ss_pred HHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCC-CCceeEEEecc
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFD-HCSFDAVVCAV 165 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~-~~s~D~v~~~~ 165 (282)
+...++++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|+. ..++++ +++||+|+++
T Consensus 42 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 42 LSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGK--GELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp HHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSC--SSCCTTCCCCEEEEEEE-
T ss_pred HHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchh--hccCCcCCCCEEEEEeC-
Confidence 34456788999999999887543322 36799999999999976653 3567777774 357777 8899999997
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
.++..++++++++|||||.++
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEE
Confidence 477889999999999999999
No 94
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.44 E-value=2.9e-13 Score=108.55 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=71.0
Q ss_pred CCCCCeEEEeCCcccchhh---hhcCCCeEEEEcCCHHHHHhCCCC------C-c-eEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLP---QEVSYKRVVGHGLNAQELAKNPRL------E-Y-FIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~---~~~~~~~v~giD~s~~~l~~~~~~------~-~-~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||+|||+|.... ...++.+|+|+|+|+.+++.++.+ . . +...+.. ..++..+++||+|++
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAP--RAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTT--GGGGGCCSCCSEEEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchH--hhhhccCCCCCEEEE
Confidence 4567899999999886543 333578999999999998765421 1 1 3333331 233433378999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
..+++| ..+++++.++|||||.+++.....
T Consensus 101 ~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 101 GGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 999988 679999999999999999987654
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=2.5e-13 Score=112.76 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=75.5
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC--CCCCceeEEE
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE--FDHCSFDAVV 162 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~--~~~~s~D~v~ 162 (282)
.++.+|||||||+|... +...+..+|+|+|+|+.+++.++. +..+..+|+ ..++ +++++||+|+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG---SDLTDYFEDGEIDRLY 116 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCS---SCGGGTSCTTCCSEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCH---HHHHhhcCCCCCCEEE
Confidence 35788999999988754 344467899999999999876542 335666666 4555 6678999999
Q ss_pred ecchhhccC--------CHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 163 CAVSVQYLQ--------QPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 163 ~~~~l~~~~--------~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+++...+.. ....+++++.++|||||.+++.+.+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG 160 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 997654332 236799999999999999999876543
No 96
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.44 E-value=1.6e-13 Score=115.95 Aligned_cols=103 Identities=13% Similarity=0.101 Sum_probs=73.0
Q ss_pred CCCCeEEEeCCcccchhh---hhcCCCeEEEEcCCHHHHHhCC--------------CCCceEEeecccccC-CC--CCC
Q 023470 96 RPGSEVLDLMSSWVSHLP---QEVSYKRVVGHGLNAQELAKNP--------------RLEYFIVKDLNQDQK-LE--FDH 155 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~---~~~~~~~v~giD~s~~~l~~~~--------------~~~~~~~~d~~~~~~-l~--~~~ 155 (282)
.++.+|||||||+|..+. ...+...|+|+|+|+.|++.++ .+..+..+|+ .. ++ +++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~---~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA---MKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT---TTCHHHHCCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH---HHhhhhhCCC
Confidence 456789999999887543 3346789999999999986432 1235566666 43 55 678
Q ss_pred CceeEEEecchhhccCC--------HHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 156 CSFDAVVCAVSVQYLQQ--------PEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~~~--------~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
++||.|++.+...|... ...+++++.++|||||.|++.+.+..+..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~ 175 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHD 175 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHH
Confidence 99999998664333211 14699999999999999999987664444
No 97
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.44 E-value=2.3e-13 Score=110.25 Aligned_cols=100 Identities=12% Similarity=0.125 Sum_probs=75.4
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC----------CceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL----------EYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~----------~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||+|||+|....... .+.+++|+|+|+.+++.++.. ..+...|+ .. ++++++||+|+++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~D~v~~~ 126 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YE-NVKDRKYNKIITN 126 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TT-TCTTSCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hc-ccccCCceEEEEC
Confidence 367899999999886433221 278999999999988654421 34555555 23 3346789999999
Q ss_pred chhhc-cCCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 165 VSVQY-LQQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 165 ~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
..++| ..+...+++++.++|||||.+++..++...
T Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 127 PPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp CCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 98887 456778999999999999999999877533
No 98
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.44 E-value=1.7e-13 Score=117.88 Aligned_cols=100 Identities=17% Similarity=0.120 Sum_probs=75.0
Q ss_pred CCCCCeEEEeCCcccchhhh---hc-CCCeEEEEcCCHH------HHHhCCC---------CCceEEee-cccccCCCCC
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EV-SYKRVVGHGLNAQ------ELAKNPR---------LEYFIVKD-LNQDQKLEFD 154 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~-~~~~v~giD~s~~------~l~~~~~---------~~~~~~~d-~~~~~~l~~~ 154 (282)
+.++.+|||||||+|..... .. +..+|+|+|+|+. |++.++. ...+...| ... ..++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD-DLGPIA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT-CCGGGT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh-ccCCCC
Confidence 56788999999998865433 22 3479999999986 7754431 22445554 211 466777
Q ss_pred CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 155 HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+++||+|++..+++|++++..+++.+.++++|||++++...
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 89999999999999999999877777777888999998754
No 99
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.44 E-value=1.4e-13 Score=114.54 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=74.4
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC--CCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE--FDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~--~~~~s~D~v~~ 163 (282)
++.+|||||||+|... +...+..+|+|+|+|+.|++.++. +..+..+|+ ..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~---~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCH---HHHHhhcCcCCcCEEEE
Confidence 5778999999988654 333468899999999999876542 234556665 4454 66789999998
Q ss_pred cchhhccCC--------HHHHHHHHHHcccCCcEEEEEEcCchhH
Q 023470 164 AVSVQYLQQ--------PEKVFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 164 ~~~l~~~~~--------~~~~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
++...+... ...+++++.++|||||.+++.+.+....
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~ 159 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLF 159 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHH
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 765433321 3679999999999999999998665443
No 100
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.44 E-value=1.8e-13 Score=112.68 Aligned_cols=105 Identities=12% Similarity=0.028 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCCC
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKLE 152 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l~ 152 (282)
....+...+...+.++.+|||+|||+|..... ..+..+|+|+|+|+.|++.++.+ ..+...|+ ..
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~-- 120 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSL---LA-- 120 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST---TT--
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc---cc--
Confidence 34455666666677889999999998864432 23556999999999998765422 34555555 22
Q ss_pred CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 153 FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.+++||+|+++..++++ ..+++++.++|||||+++++..
T Consensus 121 ~~~~~fD~i~~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 121 DVDGKFDLIVANILAEIL---LDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp TCCSCEEEEEEESCHHHH---HHHGGGSGGGEEEEEEEEEEEE
T ss_pred cCCCCceEEEECCcHHHH---HHHHHHHHHhcCCCCEEEEEec
Confidence 345899999999988875 7899999999999999998744
No 101
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.44 E-value=2.1e-13 Score=110.97 Aligned_cols=113 Identities=14% Similarity=0.017 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHhhC-CCCCeEEEeCCcccchhh--hhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccC
Q 023470 82 GFISTLTNLYRQML-RPGSEVLDLMSSWVSHLP--QEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQK 150 (282)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~~vLDiGcG~~~~~~--~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~ 150 (282)
...+.+...+.... .++.+|||+|||+|.... ...+..+|+|+|+|+.|++.++. ...+..+|+ .+
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~ 104 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAV---AA 104 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCH---HH
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccH---HH
Confidence 44555555555432 367899999999886543 22355689999999999976543 235666666 33
Q ss_pred CC--CCCCceeEEEecchhhcc-CCHHHHHHHHHH--cccCCcEEEEEEcCc
Q 023470 151 LE--FDHCSFDAVVCAVSVQYL-QQPEKVFAEVFR--VLKPGGVFIVSFSNR 197 (282)
Q Consensus 151 l~--~~~~s~D~v~~~~~l~~~-~~~~~~l~~~~r--~LkpgG~li~~~~~~ 197 (282)
+. +++++||+|+++..+++. .+...+++++.+ +|||||.+++..+..
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 32 346889999999887775 678889999999 999999999987654
No 102
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.43 E-value=3.4e-13 Score=115.49 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=70.8
Q ss_pred CeEEEeCCcc--cc---hhh-hhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccC-CCCC--CCcee--
Q 023470 99 SEVLDLMSSW--VS---HLP-QEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQK-LEFD--HCSFD-- 159 (282)
Q Consensus 99 ~~vLDiGcG~--~~---~~~-~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~-l~~~--~~s~D-- 159 (282)
.+|||||||+ +. .++ ...+..+|+++|.|+.|++.++. ...++..|+..... +..+ .++||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 5799999996 21 122 23478999999999999987753 23567777732100 0101 23344
Q ss_pred ---EEEecchhhccCC---HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 160 ---AVVCAVSVQYLQQ---PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 160 ---~v~~~~~l~~~~~---~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.|+++.+|||+++ +..+++++++.|+|||+|+++....
T Consensus 160 ~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 160 RPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp SCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 6889999999987 5679999999999999999986543
No 103
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=3.5e-13 Score=111.90 Aligned_cols=99 Identities=17% Similarity=0.059 Sum_probs=66.3
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHH----HhCC--CCCceEEeecccccC-CCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQEL----AKNP--RLEYFIVKDLNQDQK-LEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l----~~~~--~~~~~~~~d~~~~~~-l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|... +...+..+|+|+|+|+.|+ +.++ .+..+..+|...... .++. ++||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 457889999999998643 3333457999999999765 3332 223344555521111 2444 789999998
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
. .++ .+...++++++|+|||||++++.++.
T Consensus 134 ~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 134 I-AQK-NQIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp C-CST-THHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred c-cCh-hHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 3 222 23344699999999999999999653
No 104
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.42 E-value=8.8e-13 Score=118.38 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=73.0
Q ss_pred CCCeEEEeCCcccchhh---hhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 97 PGSEVLDLMSSWVSHLP---QEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~---~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
...+|||||||+|.... ...+..+++++|+ +.+++.++. ...+..+|+.. ..+|++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLD-RDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCS-SSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccc-cCCCCC-CCcCEEEEe
Confidence 56799999999886543 3347889999999 888865442 23566777632 112455 789999999
Q ss_pred chhhccCCHH--HHHHHHHHcccCCcEEEEEE
Q 023470 165 VSVQYLQQPE--KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 165 ~~l~~~~~~~--~~l~~~~r~LkpgG~li~~~ 194 (282)
.++|++++.+ .++++++++|||||++++..
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999998664 68999999999999998864
No 105
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.42 E-value=8.9e-14 Score=124.65 Aligned_cols=102 Identities=18% Similarity=0.261 Sum_probs=77.5
Q ss_pred HHHhhCCCCCeEEEeCCc------ccc---hhhhh-cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCC-----
Q 023470 90 LYRQMLRPGSEVLDLMSS------WVS---HLPQE-VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFD----- 154 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG------~~~---~~~~~-~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~----- 154 (282)
.+.....++.+||||||| +|. .+... .+..+|+|+|+|++|.. ...+..+.++|. .++++.
T Consensus 209 lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-~~~rI~fv~GDa---~dlpf~~~l~~ 284 (419)
T 3sso_A 209 HFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-DELRIRTIQGDQ---NDAEFLDRIAR 284 (419)
T ss_dssp HHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG-CBTTEEEEECCT---TCHHHHHHHHH
T ss_pred HHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh-cCCCcEEEEecc---cccchhhhhhc
Confidence 344444567899999999 433 22222 36889999999999853 334557888888 666665
Q ss_pred -CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 155 -HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 155 -~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++||+|+|.. .|+..+...+|++++|+|||||++++....
T Consensus 285 ~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 285 RYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 68999999875 467778889999999999999999998654
No 106
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.42 E-value=3.4e-13 Score=112.98 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=75.5
Q ss_pred HHhhCCCCCeEEEeCCc-ccchhhhhc-C-CCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeE
Q 023470 91 YRQMLRPGSEVLDLMSS-WVSHLPQEV-S-YKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG-~~~~~~~~~-~-~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
+...++++.+|||+||| +|....... . +.+|+|+|+|+.+++.++. ...+..+|.. ...++++++||+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~--~~~~~~~~~fD~ 126 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG--IIKGVVEGTFDV 126 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC--SSTTTCCSCEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch--hhhhcccCceeE
Confidence 44556788999999999 987543322 2 6899999999999876542 2456666652 122455689999
Q ss_pred EEecchhhccCC-------------------HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQQ-------------------PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~~-------------------~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|+++-..++..+ ...+++++.++|||||++++.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 999866554432 3779999999999999999987764
No 107
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.41 E-value=1.1e-12 Score=108.02 Aligned_cols=97 Identities=19% Similarity=0.030 Sum_probs=73.2
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||+|||+|... +...+..+|+|+|+|+.+++.++. ...+...|. .+.....++||+|++
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~~ 114 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PEGLDDLPDPDRVFI 114 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TTTCTTSCCCSEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hhhhhcCCCCCEEEE
Confidence 457889999999988643 333356899999999999876543 234555555 232223367999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
..+++ +...+++++.++|||||++++.....
T Consensus 115 ~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 115 GGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp SCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred CCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 98775 77899999999999999999986643
No 108
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=3.7e-13 Score=121.49 Aligned_cols=98 Identities=19% Similarity=0.223 Sum_probs=76.4
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...|+ .+...++++||+|+++..+|
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~---~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDV---DEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECST---TTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcch---hhccccCCCeEEEEECCchh
Confidence 67899999999886543322 46799999999999876542 245667776 55555568999999999888
Q ss_pred c-----cCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 169 Y-----LQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 169 ~-----~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+ ..+...+++++.++|||||.++++....
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 8 4466789999999999999999986543
No 109
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.40 E-value=2.3e-13 Score=111.25 Aligned_cols=106 Identities=16% Similarity=0.298 Sum_probs=75.6
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCC-
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLE- 152 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~- 152 (282)
...++...++++.+|||+|||+|... +... +..+|+|+|+|+.+++.++.+ ..+...|+ ..++
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~ 88 (197)
T 3eey_A 12 SHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNMDK 88 (197)
T ss_dssp HHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGGGG
T ss_pred HHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHHhh
Confidence 33444556778899999999988643 3322 456999999999998765422 34556665 4443
Q ss_pred CCCCceeEEEecchhh---------ccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 153 FDHCSFDAVVCAVSVQ---------YLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~---------~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.+++||+|+++..+. +..+...+++++.++|||||++++...
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 4568899999987541 111345699999999999999998753
No 110
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.40 E-value=1.1e-12 Score=116.69 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=72.1
Q ss_pred CCCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCC---------CCCceEEeecccccCCCCCCCceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNP---------RLEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~---------~~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+.++.+|||||||+|..... ..+..+|+|+|+|+ |++.++ ....+..+|+ .++++++++||+|++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKI---EEVHLPVEKVDVIIS 137 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTSCCSCSCEEEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeH---HHhcCCCCcEEEEEE
Confidence 35778999999998864332 22456999999996 775543 2335666676 677787889999998
Q ss_pred cc---hhhccCCHHHHHHHHHHcccCCcEEE
Q 023470 164 AV---SVQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 164 ~~---~l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
.. .+.|..++..+++++.++|||||.++
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 76 57777788889999999999999997
No 111
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.40 E-value=2.1e-13 Score=122.55 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=75.4
Q ss_pred HHHHHHh-hCCCCCeEEEeCCcccchhhh---hcCCCeEEEEcCCHHHHHhCC-----------------CCCceEEeec
Q 023470 87 LTNLYRQ-MLRPGSEVLDLMSSWVSHLPQ---EVSYKRVVGHGLNAQELAKNP-----------------RLEYFIVKDL 145 (282)
Q Consensus 87 ~~~~~~~-~~~~~~~vLDiGcG~~~~~~~---~~~~~~v~giD~s~~~l~~~~-----------------~~~~~~~~d~ 145 (282)
+..++.. .+.++.+|||||||+|..... ..+..+|+|+|+|+.|++.++ ....+..+|+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 3333433 356889999999999875433 235557999999998765443 2345677777
Q ss_pred ccccCCCCCC--CceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 146 NQDQKLEFDH--CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 146 ~~~~~l~~~~--~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.++++.+ .++|+|+++..+ +.++....|.+++|+|||||+|++.
T Consensus 242 ---~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 242 ---LSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ---TSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred ---cCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 5666543 469999998776 4568888999999999999999875
No 112
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.40 E-value=6.6e-13 Score=117.63 Aligned_cols=133 Identities=10% Similarity=-0.046 Sum_probs=90.8
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCC---------CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNP---------RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~---------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+..+|||||||+|... +...+..+++++|+ +.+++.++ ....+...|+ . .+++. +||+|++.
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~-~~~p~-~~D~v~~~ 242 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSF---F-DPLPA-GAGGYVLS 242 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT---T-SCCCC-SCSEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCC---C-CCCCC-CCcEEEEe
Confidence 3578999999988654 33447889999999 98886554 2345667776 3 34444 79999999
Q ss_pred chhhccCCH--HHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcchhhHH-HHHH--hhCCCCchHHhhcCC
Q 023470 165 VSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGRVQLVV-QYFQ--CVEGYTNPEIVRKLP 239 (282)
Q Consensus 165 ~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~gF~~~ei~~~~~ 239 (282)
+++||+++. ..++++++++|||||++++......... .. ...+ .++. ...-++..|+...+.
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-----------~~--~~~d~~~~~~~~~~~~t~~e~~~ll~ 309 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEH-----------AG--TGMDLRMLTYFGGKERSLAELGELAA 309 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC--------------CC--HHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCC-----------cc--HHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999999876 7799999999999999998744221110 00 0000 0111 113466677888888
Q ss_pred CCccccccc
Q 023470 240 ADSAAAQED 248 (282)
Q Consensus 240 ~~g~~~~~~ 248 (282)
.+||.....
T Consensus 310 ~aGf~~~~~ 318 (332)
T 3i53_A 310 QAGLAVRAA 318 (332)
T ss_dssp HTTEEEEEE
T ss_pred HCCCEEEEE
Confidence 888866554
No 113
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=1e-12 Score=117.62 Aligned_cols=94 Identities=13% Similarity=0.087 Sum_probs=73.7
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
..++.+|||||||+|... +...+..+++++|+ +.+++.++. ...+..+|+ .+.++++. |+|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~--D~v~ 261 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDI---YKESYPEA--DAVL 261 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCT---TTSCCCCC--SEEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcc---ccCCCCCC--CEEE
Confidence 346789999999988643 33346789999999 988865542 245667777 45566543 9999
Q ss_pred ecchhhccCC--HHHHHHHHHHcccCCcEEEEEE
Q 023470 163 CAVSVQYLQQ--PEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 163 ~~~~l~~~~~--~~~~l~~~~r~LkpgG~li~~~ 194 (282)
+..++||+++ ...++++++++|||||++++..
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999999987 6789999999999999997764
No 114
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.39 E-value=1.1e-12 Score=116.20 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=74.0
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.++.+|||+|||+|... +...+..+++|+|+| .+++.++. ...+...|+ .+.+++++ ||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~-~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSA---FEVDYGND-YDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCT---TTSCCCSC-EEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccc---ccCCCCCC-CcEEEE
Confidence 56789999999988643 333467899999999 88876543 245666766 44555544 999999
Q ss_pred cchhhccCCH--HHHHHHHHHcccCCcEEEEEEc
Q 023470 164 AVSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 164 ~~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~ 195 (282)
.+++||+++. ..++++++++|||||++++...
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 9999999654 6799999999999999888654
No 115
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.38 E-value=2.1e-12 Score=116.23 Aligned_cols=137 Identities=8% Similarity=-0.013 Sum_probs=91.9
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCC---------CCCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNP---------RLEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~---------~~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.+..+|||||||+|... +...+..+++++|+ +.+++.++ ....+...|+ . .+++. .||+|++
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~---~-~~~p~-~~D~v~~ 274 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDF---F-ETIPD-GADVYLI 274 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT---T-TCCCS-SCSEEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCC---C-CCCCC-CceEEEh
Confidence 45689999999988654 33447889999999 98886554 2345667776 3 34444 7999999
Q ss_pred cchhhccCCHH--HHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcchhhHHHHHHh--hCCCCchHHhhcCC
Q 023470 164 AVSVQYLQQPE--KVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGRVQLVVQYFQC--VEGYTNPEIVRKLP 239 (282)
Q Consensus 164 ~~~l~~~~~~~--~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~gF~~~ei~~~~~ 239 (282)
..++|+.++.. .++++++++|||||++++..............+. .. .++.. ..-++..|+...+.
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~---------d~-~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFV---------DL-LLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHH---------HH-HHHHHHSCCCBCHHHHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHh---------hH-HHHhhcCCccCCHHHHHHHHH
Confidence 99999998776 6999999999999999886432100000000000 00 01111 12366778888888
Q ss_pred CCccccccc
Q 023470 240 ADSAAAQED 248 (282)
Q Consensus 240 ~~g~~~~~~ 248 (282)
.+||.....
T Consensus 345 ~aGf~~~~~ 353 (369)
T 3gwz_A 345 KSGLRVERS 353 (369)
T ss_dssp TTTEEEEEE
T ss_pred HCCCeEEEE
Confidence 888876654
No 116
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.38 E-value=1.4e-12 Score=106.86 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=72.5
Q ss_pred HHHHHHh--hCCCCCeEEEeCCcccch---hhhhcC--CCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-------
Q 023470 87 LTNLYRQ--MLRPGSEVLDLMSSWVSH---LPQEVS--YKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE------- 152 (282)
Q Consensus 87 ~~~~~~~--~~~~~~~vLDiGcG~~~~---~~~~~~--~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~------- 152 (282)
+.++... .+.++.+|||+|||+|.. ++...+ ..+|+|+|+|+.+ ......+..+|+ .+.+
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---~~~~v~~~~~d~---~~~~~~~~~~~ 83 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---PIPNVYFIQGEI---GKDNMNNIKNI 83 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---CCTTCEEEECCT---TTTSSCCC---
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---CCCCceEEEccc---cchhhhhhccc
Confidence 4444443 256788999999998864 333334 5899999999832 112345667776 3443
Q ss_pred ------------------CCCCceeEEEecchhhccC----CH-------HHHHHHHHHcccCCcEEEEEEcC
Q 023470 153 ------------------FDHCSFDAVVCAVSVQYLQ----QP-------EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 153 ------------------~~~~s~D~v~~~~~l~~~~----~~-------~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++++||+|++..++++.. +. ..++++++++|||||.+++.+..
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 4567999999998777642 22 23789999999999999987654
No 117
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.37 E-value=4.7e-13 Score=106.51 Aligned_cols=114 Identities=10% Similarity=0.071 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-------CCceEEeecccc-cCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQD-QKLE 152 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~-~~l~ 152 (282)
...+.+...+...++++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+...|.... ..++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (171)
T 1ws6_A 26 RLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAK 105 (171)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhh
Confidence 34555555555555577899999999887543322 35569999999999876653 334555555210 0111
Q ss_pred CCCCceeEEEecchhhccCCHHHHHHHHH--HcccCCcEEEEEEcCc
Q 023470 153 FDHCSFDAVVCAVSVQYLQQPEKVFAEVF--RVLKPGGVFIVSFSNR 197 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~~~~~ 197 (282)
..+++||+|++...++ .+.+.+++.+. ++|||||.++++++..
T Consensus 106 ~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 106 AQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 1234799999997765 56677777777 9999999999987754
No 118
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=3.4e-13 Score=111.41 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=71.7
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
+.++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. +..+...|. .....++++||+|++..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG---WQGWQARAPFDAIIVTA 151 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc---ccCCccCCCccEEEEcc
Confidence 4578899999999886433221 36899999999999876542 234566665 34444468899999999
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++|+++ ++.++|||||++++.+++
T Consensus 152 ~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 APPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp BCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred chhhhhH------HHHHhcccCcEEEEEEcC
Confidence 9999975 689999999999999876
No 119
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=1.6e-12 Score=107.31 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=70.0
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|....... .+.+|+|+|+|++|++.++. ...+..+|. .+......+||+|++.
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~~~~~D~v~~~ 129 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PAALADLPLPEAVFIG 129 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TGGGTTSCCCSEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hhhcccCCCCCEEEEC
Confidence 4578899999999886432211 37899999999999876542 234556665 3321123579999988
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.++ +.+ +++++.++|||||+++++....
T Consensus 130 ~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 130 GGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp SCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred Ccc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 754 566 9999999999999999987754
No 120
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.37 E-value=1.3e-12 Score=117.56 Aligned_cols=139 Identities=18% Similarity=0.117 Sum_probs=90.1
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.++.+|||||||+|... +...+..+++++|+ +.+++.++. ...+...|+. + +++. .||+|++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~-~~~~-~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFF---K-PLPV-TADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT---S-CCSC-CEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCC---C-cCCC-CCCEEEE
Confidence 46789999999988653 33346789999999 998875542 3456666662 2 3333 3999999
Q ss_pred cchhhccCCHH--HHHHHHHHcccCCcEEEEEEc--C-chhHHHHHHhhhcCCCCcchhhHHHHHHhhCCCCchHHhhcC
Q 023470 164 AVSVQYLQQPE--KVFAEVFRVLKPGGVFIVSFS--N-RMFYEKAISAWRDGTAYGRVQLVVQYFQCVEGYTNPEIVRKL 238 (282)
Q Consensus 164 ~~~l~~~~~~~--~~l~~~~r~LkpgG~li~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gF~~~ei~~~~ 238 (282)
..++||+++.. .++++++++|||||++++... . +.........+.+ ... .......-++..++...+
T Consensus 255 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 255 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLD------LRM--LTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHH------HHH--HHHHSCCCCCHHHHHHHH
T ss_pred eccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcc------hHH--HHhCCCcCCCHHHHHHHH
Confidence 99999998775 799999999999999988654 1 1100000000000 000 000111336778888888
Q ss_pred CCCccccccc
Q 023470 239 PADSAAAQED 248 (282)
Q Consensus 239 ~~~g~~~~~~ 248 (282)
..+||.....
T Consensus 327 ~~aGf~~~~~ 336 (374)
T 1qzz_A 327 GSAGLALASE 336 (374)
T ss_dssp HTTTEEEEEE
T ss_pred HHCCCceEEE
Confidence 8888866553
No 121
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.37 E-value=6.9e-13 Score=111.26 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=65.9
Q ss_pred CCCCCeEEEeCCcccchhhh---hcCCCeEEEEcCC-HHHHHhC---CCC--------CceEEeecccccCCCCC-CCce
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EVSYKRVVGHGLN-AQELAKN---PRL--------EYFIVKDLNQDQKLEFD-HCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~~~~~v~giD~s-~~~l~~~---~~~--------~~~~~~d~~~~~~l~~~-~~s~ 158 (282)
..++.+|||||||+|..... ..++.+|+|+|+| +.|++.+ +.. ..+..+|. +.++.. .+.+
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~---~~l~~~~~d~v 98 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAA---ESLPFELKNIA 98 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBT---TBCCGGGTTCE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCH---HHhhhhccCeE
Confidence 45778999999999875433 2467899999999 6675544 322 24455555 555421 2556
Q ss_pred eEEEecchhhc-----cCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 159 DAVVCAVSVQY-----LQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 159 D~v~~~~~l~~-----~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|.|.+++...+ ..+...++++++|+|||||++++.+
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 77766653222 2345679999999999999999843
No 122
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.36 E-value=4.2e-13 Score=113.49 Aligned_cols=92 Identities=10% Similarity=0.026 Sum_probs=70.6
Q ss_pred CCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCC---CCceeEE
Q 023470 96 RPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFD---HCSFDAV 161 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~---~~s~D~v 161 (282)
.++.+|||+|||+|.. ++...++.+|+|+|+|++|++.++. ...+..+|+ .++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRA---ETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCH---HHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccH---HHhcccccccCCccEE
Confidence 3678999999998853 3333477899999999999865542 234556665 455543 5789999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
+|.. +.+...+++++.++|||||.+++..
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 9976 4678999999999999999998863
No 123
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.36 E-value=1.1e-12 Score=117.30 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=72.6
Q ss_pred CCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|...... .+..+|+|+|+| .|++.++. ...+..+++ +++++++++||+|++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKV---EEVELPVEKVDIIISE 140 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCT---TTCCCSSSCEEEEEEC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcH---HHccCCCCceEEEEEc
Confidence 47789999999988643322 255699999999 47754432 145677777 7778888999999997
Q ss_pred ch---hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VS---VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~---l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+ +++..+++.+++++.|+|||||.++..
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 54 555579999999999999999998743
No 124
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.36 E-value=6.5e-12 Score=105.57 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=67.0
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHH----HhC--CCCCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQEL----AKN--PRLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l----~~~--~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|... +... +..+|+|+|+|+.|+ +.+ +.+..+..+|...........++||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 558899999999987643 3332 567999999999875 222 234456677763211111224689999998
Q ss_pred chhhccCCHHHH-HHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQYLQQPEKV-FAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~~~~~~~~-l~~~~r~LkpgG~li~~~~~ 196 (282)
... ++.... +..+.++|||||+|++++..
T Consensus 154 ~a~---~~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 154 IAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp CCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCC---hhHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 653 455554 45666699999999998643
No 125
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.35 E-value=7.6e-12 Score=112.50 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=73.6
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
.+..+|||||||+|... +...+..+++++|+ +.+++.++.. ..+..+|+ .+ +++++ |+|++.+++||+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~p~~--D~v~~~~vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDM---FD-GVPKG--DAIFIKWICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCCC--SEEEEESCGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCC---CC-CCCCC--CEEEEechhhcC
Confidence 35679999999988654 34457889999999 9999887754 45667776 33 55544 999999999999
Q ss_pred CCHH--HHHHHHHHcccCCcEEEEEE
Q 023470 171 QQPE--KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 171 ~~~~--~~l~~~~r~LkpgG~li~~~ 194 (282)
++.+ .+|++++++|||||++++..
T Consensus 275 ~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8664 68999999999999998864
No 126
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.34 E-value=2.7e-12 Score=115.54 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=74.6
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
+.+..+|||||||+|... +...+..+++++|+ +.+++.++.. ..+..+|+ .+ ++++ ||+|++.+++||
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~~~--~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDM---FA-SVPQ--GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCC--EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCc---cc-CCCC--CCEEEEeccccc
Confidence 345789999999988654 33346789999999 9999887754 35566666 34 5544 999999999999
Q ss_pred cCCHH--HHHHHHHHcccCCcEEEEE
Q 023470 170 LQQPE--KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 170 ~~~~~--~~l~~~~r~LkpgG~li~~ 193 (282)
+++.+ .++++++++|||||++++.
T Consensus 280 ~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 280 WSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99888 8999999999999999886
No 127
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.33 E-value=1.9e-12 Score=112.15 Aligned_cols=106 Identities=13% Similarity=0.046 Sum_probs=71.3
Q ss_pred HHHHHHHhhC-C-CCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhC-CCCCceEEeecccccCCC---CCCCc
Q 023470 86 TLTNLYRQML-R-PGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKN-PRLEYFIVKDLNQDQKLE---FDHCS 157 (282)
Q Consensus 86 ~~~~~~~~~~-~-~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~-~~~~~~~~~d~~~~~~l~---~~~~s 157 (282)
.+...+.... . ++.+|||+|||+|.+.... .+..+|+|+|+|+.|++.+ +...............++ ++..+
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 4555555442 2 4679999999998755332 2456999999999998652 222222221111102221 34456
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|++..+++++ ..+|.+++|+|||||.+++.+
T Consensus 152 fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 152 PSFASIDVSFISL---NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp CSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEE
Confidence 9999998887755 889999999999999998864
No 128
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.33 E-value=1.4e-11 Score=110.70 Aligned_cols=92 Identities=11% Similarity=0.161 Sum_probs=73.7
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
.+..+|||||||+|... +...+..+++++|+ +.+++.++.. ..+..+|+ .+ +++++ |+|++.+++||+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~---~~-~~p~~--D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDM---FK-EVPSG--DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCCC--SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCc---CC-CCCCC--CEEEehHHhccC
Confidence 45689999999988654 34447889999999 8899887754 46677776 44 56554 999999999999
Q ss_pred CCH--HHHHHHHHHcccCCcEEEEEE
Q 023470 171 QQP--EKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 171 ~~~--~~~l~~~~r~LkpgG~li~~~ 194 (282)
++. ..+|++++++|||||++++..
T Consensus 273 ~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 273 SDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 755 469999999999999998863
No 129
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.33 E-value=1.3e-12 Score=107.52 Aligned_cols=110 Identities=18% Similarity=0.098 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCC----------CCceEEeecccccC
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPR----------LEYFIVKDLNQDQK 150 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~----------~~~~~~~d~~~~~~ 150 (282)
..+.+...+... .++.+|||+|||+|..... .....+|+|+|+|+.|++.++. ...+..+|+ .+
T Consensus 40 ~~~~l~~~l~~~-~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~---~~ 115 (201)
T 2ift_A 40 VKETLFNWLMPY-IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSS---LD 115 (201)
T ss_dssp HHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCH---HH
T ss_pred HHHHHHHHHHHh-cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCH---HH
Confidence 333444444332 2568999999999875432 2244699999999999876542 234455554 22
Q ss_pred C-C-CCCCc-eeEEEecchhhccCCHHHHHHHH--HHcccCCcEEEEEEcCc
Q 023470 151 L-E-FDHCS-FDAVVCAVSVQYLQQPEKVFAEV--FRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 151 l-~-~~~~s-~D~v~~~~~l~~~~~~~~~l~~~--~r~LkpgG~li~~~~~~ 197 (282)
+ + +++++ ||+|++...++ ..+...+++++ .++|||||.++++....
T Consensus 116 ~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 116 FLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 2 2 23678 99999987754 56777899999 77899999999987654
No 130
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.33 E-value=4.3e-12 Score=102.54 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=70.9
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCC-CceeEEEe
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDH-CSFDAVVC 163 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~-~s~D~v~~ 163 (282)
+.++.+|||+|||+|....... ...+|+|+|+|+.+++.++. ...+...|. .. ++++ ++||+|++
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~~D~v~~ 106 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA---PE-ALCKIPDIDIAVV 106 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH---HH-HHTTSCCEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCH---HH-hcccCCCCCEEEE
Confidence 4578899999999886543322 33899999999998865542 234445554 22 2222 58999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
..++++ ...+++++.++|||||.+++..++.
T Consensus 107 ~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 107 GGSGGE---LQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp SCCTTC---HHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred CCchHH---HHHHHHHHHHhcCCCcEEEEEecCc
Confidence 988765 4889999999999999999987654
No 131
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.33 E-value=5.4e-12 Score=111.72 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=70.1
Q ss_pred CCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|..... ..+..+|+|+|+| .|++.++. ...+..+|+ .++++++++||+|++.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKL---EDVHLPFPKVDIIISE 112 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCT---TTSCCSSSCEEEEEEC
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECch---hhccCCCCcccEEEEe
Confidence 3678999999998864322 2345699999999 57754431 234666666 6677777899999998
Q ss_pred c---hhhccCCHHHHHHHHHHcccCCcEEEE
Q 023470 165 V---SVQYLQQPEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 165 ~---~l~~~~~~~~~l~~~~r~LkpgG~li~ 192 (282)
. .+.+..+++.++.++.++|||||.++.
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 4 455667788999999999999999973
No 132
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.33 E-value=2e-12 Score=108.36 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=70.6
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
+.++.+|||+|||+|....... .+.+|+|+|+|+.+++.++. ...+...|. ......+++||+|++..++
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG---TLGYEEEKPYDRVVVWATA 144 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG---GGCCGGGCCEEEEEESSBB
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc---ccccccCCCccEEEECCcH
Confidence 4577899999999886543322 23799999999999876542 234556665 3322235789999999999
Q ss_pred hccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 168 QYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 168 ~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|+. .++.++|||||++++.++..
T Consensus 145 ~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 145 PTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred HHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 9986 47999999999999997754
No 133
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.33 E-value=7.5e-12 Score=111.63 Aligned_cols=94 Identities=15% Similarity=0.055 Sum_probs=70.6
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCC-------CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNP-------RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~-------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||||||+|... +...+..+++++|++ .++...+ ....+..+|+ . .+++ +||+|++.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~---~-~~~p--~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDF---L-REVP--HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCT---T-TCCC--CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEecCC---C-CCCC--CCcEEEEe
Confidence 346779999999988654 344477899999995 4444322 1235566666 2 2344 89999999
Q ss_pred chhhccCCH--HHHHHHHHHcccCCcEEEEEEc
Q 023470 165 VSVQYLQQP--EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 165 ~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~~ 195 (282)
.++||+++. ..++++++++|||||++++...
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999999987 5899999999999999988643
No 134
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=3.1e-12 Score=107.45 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=67.9
Q ss_pred CCCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhC----CC--CCceEEeecccccC----CCCCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKN----PR--LEYFIVKDLNQDQK----LEFDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~----~~--~~~~~~~d~~~~~~----l~~~~~s~D~v 161 (282)
+.++.+|||+|||+|.. ++...+..+|+|+|+|+.|++.+ +. +..+..+|. .. +++. ++||+|
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~~~~~~-~~~D~v 147 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQEYANIV-EKVDVI 147 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGGGTTTS-CCEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCcccccccC-ccEEEE
Confidence 34678999999998864 33333557999999999988543 22 234556666 44 5555 789999
Q ss_pred EecchhhccCCH---HHHHHHHHHcccCCcEEEEEE
Q 023470 162 VCAVSVQYLQQP---EKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 162 ~~~~~l~~~~~~---~~~l~~~~r~LkpgG~li~~~ 194 (282)
+ ++++++ ..+++++.++|||||.+++.+
T Consensus 148 ~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 148 Y-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp E-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred E-----EecCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9 455666 778999999999999999874
No 135
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.32 E-value=5.1e-12 Score=112.84 Aligned_cols=93 Identities=8% Similarity=0.048 Sum_probs=74.6
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
+.+..+|||||||+|... +...++.+++++|+ +.|++.++.. ..+..+|+ .+ +++ .||+|++.+++||
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~p--~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDM---FT-SIP--NADAVLLKYILHN 258 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCT---TT-CCC--CCSEEEEESCGGG
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccc---cC-CCC--CccEEEeehhhcc
Confidence 346689999999988654 33347789999999 9999888754 34556665 33 444 3999999999999
Q ss_pred cCCHH--HHHHHHHHcccC---CcEEEEEE
Q 023470 170 LQQPE--KVFAEVFRVLKP---GGVFIVSF 194 (282)
Q Consensus 170 ~~~~~--~~l~~~~r~Lkp---gG~li~~~ 194 (282)
+++.+ .++++++++||| ||++++..
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99887 899999999999 99998874
No 136
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.31 E-value=4.8e-12 Score=109.21 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=73.9
Q ss_pred HHHHHHHhhC-CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCCCC
Q 023470 86 TLTNLYRQML-RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKLEF 153 (282)
Q Consensus 86 ~~~~~~~~~~-~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l~~ 153 (282)
.+...+...+ .++.+|||+|||+|... +...+..+|+|+|+|+.+++.++.+ ..+..+|.. . ++
T Consensus 97 ~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~---~-~~ 172 (276)
T 2b3t_A 97 CLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWF---S-AL 172 (276)
T ss_dssp HHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTT---G-GG
T ss_pred HHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchh---h-hc
Confidence 3444444444 46779999999988643 3344678999999999998765422 345555552 2 23
Q ss_pred CCCceeEEEec-------------chhhccC------------CHHHHHHHHHHcccCCcEEEEEEc
Q 023470 154 DHCSFDAVVCA-------------VSVQYLQ------------QPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 154 ~~~s~D~v~~~-------------~~l~~~~------------~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
++++||+|+++ .+++|.+ +...+++++.++|||||.++++.+
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 36789999998 3444433 346789999999999999999854
No 137
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=6.8e-12 Score=100.67 Aligned_cols=94 Identities=11% Similarity=-0.005 Sum_probs=72.3
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
..++.+|||+|||+|....... +..+++|+|+|+.+++.++. ...+...|+ .+ ++++++||+|++..
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA---ED-VLDKLEFNKAFIGG 108 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH---HH-HGGGCCCSEEEECS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc---cc-cccCCCCcEEEECC
Confidence 4467899999999886543322 77899999999999876542 234555665 33 45567899999998
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+ .+...+++++.++ |||.+++..++..
T Consensus 109 ~----~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 109 T----KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp C----SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred c----ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 8 6778999999999 9999999987653
No 138
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.30 E-value=4e-13 Score=110.77 Aligned_cols=96 Identities=17% Similarity=0.113 Sum_probs=57.8
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCCC-------ceEEeecccccCCCCCC-----CceeE
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRLE-------YFIVKDLNQDQKLEFDH-----CSFDA 160 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~~-------~~~~~d~~~~~~l~~~~-----~s~D~ 160 (282)
.++.+|||+|||+|... +...+..+++|+|+|+.|++.++.+. .+..+|+ .+ ++++ ++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~-~~~~~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADG---IE-WLIERAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHH---HH-HHHHHHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcch---Hh-hhhhhhhccCcccE
Confidence 57789999999988653 33335679999999999998876542 2334444 22 3444 89999
Q ss_pred EEecchh------hccCCH--------------------HHHHHHHHHcccCCcE-EEEEEc
Q 023470 161 VVCAVSV------QYLQQP--------------------EKVFAEVFRVLKPGGV-FIVSFS 195 (282)
Q Consensus 161 v~~~~~l------~~~~~~--------------------~~~l~~~~r~LkpgG~-li~~~~ 195 (282)
|+++... +++... ..+++++.++|||||+ +++.++
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 9996433 222211 6788999999999999 666654
No 139
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.30 E-value=3.6e-12 Score=113.69 Aligned_cols=93 Identities=18% Similarity=0.238 Sum_probs=71.6
Q ss_pred CCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCC-CCCCceeEEEec
Q 023470 98 GSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLE-FDHCSFDAVVCA 164 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~-~~~~s~D~v~~~ 164 (282)
+.+|||||||+|... +...+..+++++|+ +.+++.++. ...+..+|+ ...+ +..+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNL---LDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCT---TCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCc---ccCcccCCCCccEEEEe
Confidence 689999999988654 34447789999999 777754432 235666776 3333 134669999999
Q ss_pred chhhccCCH--HHHHHHHHHcccCCcEEEEEE
Q 023470 165 VSVQYLQQP--EKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 165 ~~l~~~~~~--~~~l~~~~r~LkpgG~li~~~ 194 (282)
.++||+++. ..++++++++|||||++++..
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999865 779999999999999998864
No 140
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.29 E-value=5.2e-12 Score=108.96 Aligned_cols=149 Identities=18% Similarity=0.146 Sum_probs=95.7
Q ss_pred CCCCCeEEEeCCcccchh---hhh-cCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQE-VSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~-~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
+.++.+|||+|||+|... +.. .++.+|+|+|+|+.+++.++. +..+..+|+ .+ ++++++||+|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~-~~~~~~fD~V 183 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI---AD-FISDQMYDAV 183 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT---TT-CCCSCCEEEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch---hc-cCcCCCccEE
Confidence 456789999999987643 332 257899999999998865432 234455555 33 5566889999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcchhhHHHHHHhhCCCCchHHhhcCCCC
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGRVQLVVQYFQCVEGYTNPEIVRKLPAD 241 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gF~~~ei~~~~~~~ 241 (282)
++ |++++..+++++.++|||||++++.++....... +...+. ..||...++.+.+...
T Consensus 184 i~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------------~~~~l~-~~Gf~~~~~~~~~~~~ 241 (275)
T 1yb2_A 184 IA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEK----------------TVLSLS-ASGMHHLETVELMKRR 241 (275)
T ss_dssp EE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHH----------------HHHHSG-GGTEEEEEEEEEEECC
T ss_pred EE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH----------------HHHHHH-HCCCeEEEEEEEecce
Confidence 98 6778889999999999999999999875422111 111122 2577777666544442
Q ss_pred ccccccccCchHHHHHHhccCCCCCCeEEEEEeecC
Q 023470 242 SAAAQEDKSPISWLMRLLGFLSGSDPFYAVIAYKNF 277 (282)
Q Consensus 242 g~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~k~~ 277 (282)
.-......+|..+ . ...+.|++.++|..
T Consensus 242 ~~~~~~~~rp~~~------~--~~~~~~li~ark~~ 269 (275)
T 1yb2_A 242 ILVREGATRPASD------D--LTHTAFITFAIKKS 269 (275)
T ss_dssp CCCCTTCCCCGGG------G--SCEEEEEEEEEECC
T ss_pred eEecCCccccccc------c--CCCcEEEEEEEehh
Confidence 1111222233222 1 23567888887753
No 141
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.28 E-value=4.1e-12 Score=114.59 Aligned_cols=105 Identities=17% Similarity=0.126 Sum_probs=75.4
Q ss_pred HHHHHHHHHhh--CCCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccC
Q 023470 84 ISTLTNLYRQM--LRPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQK 150 (282)
Q Consensus 84 ~~~~~~~~~~~--~~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~ 150 (282)
...+.+.+... +.++.+|||||||+|..... ..+..+|+|+|+| .|++.++. ...+..+|+ ++
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~---~~ 123 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSV---ED 123 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCG---GG
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECch---hh
Confidence 33444444433 34678999999998864332 2244599999999 88765432 135667777 66
Q ss_pred CCCCCCceeEEEecchhhcc---CCHHHHHHHHHHcccCCcEEEEE
Q 023470 151 LEFDHCSFDAVVCAVSVQYL---QQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 151 l~~~~~s~D~v~~~~~l~~~---~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
++++ ++||+|++..+.+++ .+++.+++++.++|||||.++++
T Consensus 124 ~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 124 ISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 6665 889999997654444 57888999999999999999764
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=9.2e-12 Score=103.08 Aligned_cols=94 Identities=22% Similarity=0.243 Sum_probs=69.8
Q ss_pred CCCCCeEEEeCCcccchhhh---hc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
+.++.+|||+|||+|..... .. +..+|+|+|+|+.+++.++. ...+...|.. ..++ .+++||+|+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~--~~~~-~~~~fD~v~ 151 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGT--LGYE-PLAPYDRIY 151 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGG--GCCG-GGCCEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc--cCCC-CCCCeeEEE
Confidence 45788999999998764332 22 33799999999999876542 2344555542 2222 257899999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+..+++|+. +++.++|||||++++.++..
T Consensus 152 ~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 152 TTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred ECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 999999986 48999999999999998754
No 143
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.28 E-value=2.3e-12 Score=104.06 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=72.4
Q ss_pred CCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccc-cCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQD-QKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~-~~l~~~~~s~D~v~~ 163 (282)
.++.+|||+|||+|..... ..+..+|+|+|+|+.|++.++.+ ..+..+|.... ..++..+++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 3678999999998875432 23457999999999998765422 34556665210 112223678999999
Q ss_pred cchhhccCCHHHHHHHH--HHcccCCcEEEEEEcCc
Q 023470 164 AVSVQYLQQPEKVFAEV--FRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~--~r~LkpgG~li~~~~~~ 197 (282)
...++ ..+....++.+ .++|||||.+++..+..
T Consensus 123 ~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 87744 45677888888 99999999999987754
No 144
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=1.7e-11 Score=99.78 Aligned_cols=98 Identities=20% Similarity=0.200 Sum_probs=66.7
Q ss_pred hCCCCCeEEEeCCcccchh---hhhcCC---------CeEEEEcCCHHHHHhCCCCCceE-EeecccccCCC--------
Q 023470 94 MLRPGSEVLDLMSSWVSHL---PQEVSY---------KRVVGHGLNAQELAKNPRLEYFI-VKDLNQDQKLE-------- 152 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~---~~~~~~---------~~v~giD~s~~~l~~~~~~~~~~-~~d~~~~~~l~-------- 152 (282)
.+.++.+|||+|||+|... +...+. .+|+|+|+|+.+ ......+. ..|+. ..+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---~~~~~~~~~~~d~~---~~~~~~~~~~~ 92 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---PLEGATFLCPADVT---DPRTSQRILEV 92 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---CCTTCEEECSCCTT---SHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---cCCCCeEEEeccCC---CHHHHHHHHHh
Confidence 3567899999999987643 333333 799999999842 11223445 55542 221
Q ss_pred CCCCceeEEEecchhhc----cCCH-------HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 153 FDHCSFDAVVCAVSVQY----LQQP-------EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~----~~~~-------~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++++||+|+|..++++ ..+. ..+++++.++|||||.+++.+...
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 34568999999765443 2333 478999999999999999986543
No 145
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.28 E-value=1e-13 Score=117.14 Aligned_cols=93 Identities=16% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEecch
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ .+++ ++++||+|+++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF---LLLA-SFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHG-GGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECCh---HHhc-ccCCCCEEEECCC
Confidence 67899999999886543322 46899999999999876542 235666666 4444 4678999999999
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
++|..+....+.+++++|||||.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 999988777888999999999997655
No 146
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.28 E-value=4.7e-12 Score=107.82 Aligned_cols=93 Identities=14% Similarity=0.005 Sum_probs=70.3
Q ss_pred CCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCC---CCCceeEE
Q 023470 96 RPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEF---DHCSFDAV 161 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~---~~~s~D~v 161 (282)
.++.+|||||||+|.. ++...+..+|+|+|+|+++++.++. +..+..+++ ++++. .+++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~---~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRA---EVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCH---HHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcH---HHhhcccccCCCceEE
Confidence 3578999999998864 3444578899999999999876542 234556665 44443 24789999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+|.. +.+...+++.+.++|||||++++...
T Consensus 156 ~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 156 VARA----VAPLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEES----SCCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EECC----cCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9964 45778999999999999999987643
No 147
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.27 E-value=3.7e-12 Score=108.76 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=73.6
Q ss_pred HHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCce
Q 023470 87 LTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 87 ~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~ 158 (282)
..+.+...+.++.+|||+|||+|....... .+.+|+|+|+|+.+++.++.+ ..+...+.. . ++++++|
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~---~-~~~~~~f 185 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE---A-ALPFGPF 185 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH---H-HGGGCCE
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChh---h-cCcCCCC
Confidence 444555557788999999999886432221 344999999999988665432 344455542 2 1346789
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|+|+++...+++ ..++.++.++|||||+++++..
T Consensus 186 D~Vv~n~~~~~~---~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 186 DLLVANLYAELH---AALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEEEECCHHHH---HHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCcHHHH---HHHHHHHHHHcCCCCEEEEEee
Confidence 999998766654 7899999999999999999743
No 148
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=9.7e-12 Score=105.71 Aligned_cols=95 Identities=23% Similarity=0.278 Sum_probs=73.7
Q ss_pred CCCCCeEEEeCCcccchh---hhh-cCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQE-VSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~-~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
+.++.+|||+|||.|... +.. .+..+|+++|+|+.+++.++. ...+...|+ .+.++++++||+|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~~~~~~~~~D~v 170 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL---EEAELEEAAYDGV 170 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG---GGCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch---hhcCCCCCCcCEE
Confidence 457889999999987643 333 247899999999998865432 234556666 4556777899999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++ +.+++..+++++.++|||||.+++..+..
T Consensus 171 ~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 171 AL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred EE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 98 56788899999999999999999988754
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.27 E-value=5e-12 Score=103.98 Aligned_cols=91 Identities=9% Similarity=0.008 Sum_probs=68.9
Q ss_pred CCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEEecc
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
++.+|||+|||+|.. ++...+..+++|+|+|+.+++.++. ...+...|+ ..++ ++++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRV---EEFP-SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCT---TTSC-CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecch---hhCC-ccCCcCEEEEec
Confidence 478999999998864 3333467899999999999865542 134555665 4444 457899999854
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.+...+++++.++|||||.+++...
T Consensus 141 ----~~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 141 ----FASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ----SSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ----cCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 35678999999999999999998843
No 150
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.26 E-value=1.8e-12 Score=104.11 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=69.1
Q ss_pred CCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccC-CCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQK-LEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~-l~~~~~s~D~v~~ 163 (282)
.++.+|||+|||+|...... .+..+|+|+|+|+.|++.++.+ ..+...|+ .+ ++..+++||+|++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA---ERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCH---HHHHHHBCSCEEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcH---HHhHHhhcCCCCEEEE
Confidence 46789999999988754322 2457999999999998765421 23445554 22 3333467999999
Q ss_pred cchhhccCCHHHHHHHHH--HcccCCcEEEEEEcCc
Q 023470 164 AVSVQYLQQPEKVFAEVF--RVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~~~~~ 197 (282)
...++. ...+..++.+. ++|||||.++++++..
T Consensus 107 ~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 107 DPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 866532 34566777776 9999999999987654
No 151
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.26 E-value=3.9e-12 Score=112.10 Aligned_cols=93 Identities=22% Similarity=0.192 Sum_probs=70.1
Q ss_pred CCCCCeEEEeCCcccchhh---hhcC-CCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHLP---QEVS-YKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~---~~~~-~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
+.++.+|||||||+|.... .... ..+|+|+|+|+++++.++. ...+...|. ......+++||+|+
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~---~~~~~~~~~fD~Iv 149 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---YYGVPEFSPYDVIF 149 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh---hhccccCCCeEEEE
Confidence 4578899999999886433 2223 4679999999999865542 234556665 44333457899999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+..+++|+. +++.++|||||++++.+..
T Consensus 150 ~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 999999996 6789999999999998654
No 152
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.26 E-value=8.4e-13 Score=125.29 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=73.7
Q ss_pred HHHHhhCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCC--CCCCCc
Q 023470 89 NLYRQMLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKL--EFDHCS 157 (282)
Q Consensus 89 ~~~~~~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l--~~~~~s 157 (282)
..+...+.++.+|||||||.|...... ..+.+|+|+|+|+.+++.|+. ...+.+.++ +++ .+++++
T Consensus 58 ~~~~~~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~ 134 (569)
T 4azs_A 58 DNLSRALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRI---EEVIAALEEGE 134 (569)
T ss_dssp HHHHHHHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCH---HHHHHHCCTTS
T ss_pred HHHHhhcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCH---HHHhhhccCCC
Confidence 334445567789999999988643322 268899999999999875541 135666666 555 456789
Q ss_pred eeEEEecchhhccCCHHH--HHHHHHHcccCCcEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEK--VFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~--~l~~~~r~LkpgG~li~ 192 (282)
||+|+|..++||++|+.. .+..+.+.|+++|..++
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 999999999999988764 35567778888887554
No 153
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=1.4e-11 Score=102.76 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=73.9
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCcccchhh---hhc-CCCeEEEEcCCHHHHHhCCC-------------CCceEEeecc
Q 023470 84 ISTLTNLYRQMLRPGSEVLDLMSSWVSHLP---QEV-SYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLN 146 (282)
Q Consensus 84 ~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~---~~~-~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~ 146 (282)
...+...+...+.++.+|||+|||+|.... ... +..+|+|+|+|+.+++.++. ...+...|.
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~- 142 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG- 142 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG-
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc-
Confidence 334444443346678899999999876433 322 34699999999998865532 234556665
Q ss_pred cccCCCCCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 147 QDQKLEFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 147 ~~~~l~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
......+++||+|++..+++++. +++.++|||||++++++..
T Consensus 143 --~~~~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 143 --RMGYAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp --GGCCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred --ccCcccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 33334467899999999887764 6899999999999998753
No 154
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.26 E-value=3.5e-12 Score=105.06 Aligned_cols=111 Identities=9% Similarity=-0.047 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE 152 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~ 152 (282)
..+.+...+.... ++.+|||+|||+|..... .....+|+|+|+|+.|++.++. ...+...|+. ..++
T Consensus 41 ~~~~l~~~l~~~~-~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~--~~~~ 117 (202)
T 2fpo_A 41 VRETLFNWLAPVI-VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM--SFLA 117 (202)
T ss_dssp HHHHHHHHHHHHH-TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH--HHHS
T ss_pred HHHHHHHHHHhhc-CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHH--HHHh
Confidence 3344444443321 568999999999875432 2234599999999999976542 2345555552 1245
Q ss_pred CCCCceeEEEecchhhccCCHHHHHHHHHH--cccCCcEEEEEEcCc
Q 023470 153 FDHCSFDAVVCAVSVQYLQQPEKVFAEVFR--VLKPGGVFIVSFSNR 197 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r--~LkpgG~li~~~~~~ 197 (282)
..+++||+|++...++ ..+...+++++.+ +|||||.++++....
T Consensus 118 ~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 118 QKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp SCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred hcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 5567899999987643 5677888898866 599999999987643
No 155
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.26 E-value=5.8e-12 Score=105.83 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=68.2
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHH----HhCC--CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQEL----AKNP--RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l----~~~~--~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|... +... +..+|+|+|+|+.|+ +.++ .+..+..+|+.....+++.+++||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 456789999999988643 3333 457999999997654 3332 33456666663211245557899999996
Q ss_pred chhhccCCH-HHHHHHHHHcccCCcEEEEEEc
Q 023470 165 VSVQYLQQP-EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 165 ~~l~~~~~~-~~~l~~~~r~LkpgG~li~~~~ 195 (282)
.. .++. ..++.++.++|||||.+++++.
T Consensus 155 ~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 155 VA---QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CC---CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC---CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 54 2232 4468899999999999999765
No 156
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.26 E-value=1.4e-11 Score=110.98 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=69.4
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC-----------CceEEeecccccCCCCCCCceeEEE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL-----------EYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~-----------~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
++.+|||+|||+|... +...++.+|+|+|+|+.|++.++.+ ..+...|+ .. ++++++||+|+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~---~~-~~~~~~fD~Ii 297 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA---LS-GVEPFRFNAVL 297 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECST---TT-TCCTTCEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechh---hc-cCCCCCeeEEE
Confidence 3579999999988643 3334678999999999999765532 23355565 22 45678999999
Q ss_pred ecchhhccCC-----HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 163 CAVSVQYLQQ-----PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 163 ~~~~l~~~~~-----~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++..+|+... ...+++++.++|||||.+++....
T Consensus 298 ~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 298 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp ECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred ECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9988876422 235899999999999999997654
No 157
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.26 E-value=5e-12 Score=108.55 Aligned_cols=97 Identities=13% Similarity=0.019 Sum_probs=67.3
Q ss_pred hCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC----------CCceE--EeecccccCCCCCCCceeEE
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR----------LEYFI--VKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~----------~~~~~--~~d~~~~~~l~~~~~s~D~v 161 (282)
.+.++.+|||+|||+|..........+|+|+|+|+ |+..++. ...+. .+|+ ..++ +++||+|
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~---~~l~--~~~fD~V 144 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDI---HTLP--VERTDVI 144 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCT---TTSC--CCCCSEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCH---hHCC--CCCCcEE
Confidence 45578899999999886533322227999999998 6433221 12334 4455 4554 6899999
Q ss_pred EecchhhccCCHH-------HHHHHHHHcccCCc--EEEEEEcCc
Q 023470 162 VCAVSVQYLQQPE-------KVFAEVFRVLKPGG--VFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~-------~~l~~~~r~LkpgG--~li~~~~~~ 197 (282)
+|..+ ++..++. .+++++.++||||| .+++.+..+
T Consensus 145 ~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 145 MCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCP 188 (265)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred EEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCC
Confidence 99877 5544431 37899999999999 999887553
No 158
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=1.2e-11 Score=106.62 Aligned_cols=95 Identities=25% Similarity=0.289 Sum_probs=73.4
Q ss_pred CCCCCeEEEeCCcccchhh---hhc-CCCeEEEEcCCHHHHHhCCC-----------CCceEEeecccccCCCCCCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHLP---QEV-SYKRVVGHGLNAQELAKNPR-----------LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~---~~~-~~~~v~giD~s~~~l~~~~~-----------~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
+.++.+|||+|||+|.... ... +..+|+++|+|+.+++.++. +..+...|+ .+.++++++||
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~---~~~~~~~~~~D 173 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL---ADSELPDGSVD 173 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG---GGCCCCTTCEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch---HhcCCCCCcee
Confidence 4578899999999876433 222 47899999999998865432 234555665 55566678999
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|++ +++++..+++++.++|||||.+++.++..
T Consensus 174 ~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 174 RAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9998 55688899999999999999999998764
No 159
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.25 E-value=5.4e-12 Score=107.86 Aligned_cols=97 Identities=19% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCC--CCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLE--FDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~--~~~~s~D~v~~ 163 (282)
++.+|||+|||+|...... ....+|+|+|+++.+++.++. ...+..+|+ .+++ +++++||+|++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~---~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL---KKITDLIPKERADIVTC 125 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG---GGGGGTSCTTCEEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcH---HHhhhhhccCCccEEEE
Confidence 6789999999988644332 233499999999999876542 235566666 3333 45789999999
Q ss_pred cchhhcc--------------------CCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYL--------------------QQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~--------------------~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+-...+. .+.+.+++++.++|||||++++..+.
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 7332222 13457999999999999999997653
No 160
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.25 E-value=6.3e-12 Score=106.91 Aligned_cols=94 Identities=21% Similarity=0.243 Sum_probs=72.1
Q ss_pred CCCCCeEEEeCCcccchh---hhh-cCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQE-VSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~-~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
+.++.+|||+|||+|... +.. .+..+|+|+|+|+.+++.++.+ ..+...|+ .+ ++++++||+|
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~~~~~D~v 166 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDI---YE-GIEEENVDHV 166 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCG---GG-CCCCCSEEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECch---hh-ccCCCCcCEE
Confidence 457889999999987643 333 2478999999999988765432 34555665 32 2567889999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++ +.+++..+++++.++|||||.+++..+..
T Consensus 167 ~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 167 IL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 98 46688889999999999999999987654
No 161
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.25 E-value=3.1e-12 Score=110.47 Aligned_cols=97 Identities=19% Similarity=0.079 Sum_probs=67.3
Q ss_pred hCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC----------CCceE--EeecccccCCCCCCCceeEE
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR----------LEYFI--VKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~----------~~~~~--~~d~~~~~~l~~~~~s~D~v 161 (282)
.+.++.+|||+|||+|..........+|+|+|+|+ |+..++. ...+. .+|+ ..++ +++||+|
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~---~~l~--~~~fD~V 152 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDV---TKME--PFQADTV 152 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCG---GGCC--CCCCSEE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcH---hhCC--CCCcCEE
Confidence 34578899999999886543322227999999998 6433221 12344 4555 4554 6899999
Q ss_pred EecchhhccCCHH-------HHHHHHHHcccCCc--EEEEEEcCc
Q 023470 162 VCAVSVQYLQQPE-------KVFAEVFRVLKPGG--VFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~-------~~l~~~~r~LkpgG--~li~~~~~~ 197 (282)
+|..+ ++..++. .+++++.++||||| .+++.+..+
T Consensus 153 vsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 153 LCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred EECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 99887 5544321 37999999999999 999876554
No 162
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.25 E-value=1.7e-11 Score=103.92 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=70.6
Q ss_pred CCCCCeEEEeCCcccchhhh---hcCCCeEEEEcCCHHHHHhCC----------------CCCceEEeecccccCCC--C
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EVSYKRVVGHGLNAQELAKNP----------------RLEYFIVKDLNQDQKLE--F 153 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~~~~~v~giD~s~~~l~~~~----------------~~~~~~~~d~~~~~~l~--~ 153 (282)
++++.+|||||||+|..... ..+..+|+|+|+|+.+++.++ .+..+..+|+. ..++ +
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~--~~l~~~~ 124 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAM--KFLPNFF 124 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTT--SCGGGTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHH--HHHHHhc
Confidence 44677899999998875433 335679999999999885432 22345666662 1244 6
Q ss_pred CCCceeEEEecchhhccCCH-------------HHHHHHHHHcccCCcEEEEEEcCch
Q 023470 154 DHCSFDAVVCAVSVQYLQQP-------------EKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~-------------~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+++++|.|+..+ +++ ..+++++.++|||||.+++.+....
T Consensus 125 ~~~~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~ 177 (246)
T 2vdv_E 125 EKGQLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKD 177 (246)
T ss_dssp CTTCEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred cccccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHH
Confidence 678999998654 333 4799999999999999999876543
No 163
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.25 E-value=4.8e-12 Score=112.31 Aligned_cols=100 Identities=25% Similarity=0.283 Sum_probs=68.8
Q ss_pred hCCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhCCC-------------------CCceEEeecccccC
Q 023470 94 MLRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKNPR-------------------LEYFIVKDLNQDQK 150 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~~~-------------------~~~~~~~d~~~~~~ 150 (282)
.+.++.+|||+|||.|... +... +..+|+|+|+++.+++.++. +..+...|+ .+
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~---~~ 178 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI---SG 178 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT---TC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh---HH
Confidence 3567889999999987643 3322 34899999999998865432 234556665 33
Q ss_pred C--CCCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 151 L--EFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 151 l--~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
. ++++++||+|++.. +++..++.++.++|||||.+++..++.....
T Consensus 179 ~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 226 (336)
T 2b25_A 179 ATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNITQVI 226 (336)
T ss_dssp CC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHHHHH
T ss_pred cccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 3 45667899999853 4555689999999999999999887654433
No 164
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.24 E-value=9e-12 Score=103.86 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=69.6
Q ss_pred CCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCC-----CCCce
Q 023470 97 PGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEF-----DHCSF 158 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~-----~~~s~ 158 (282)
++.+|||||||+|... +... ++.+|+|+|+|+.|++.++.+ ..+..+|... .++. ..++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD--LIPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HGGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH--HHHHHHHhcCCCce
Confidence 5689999999987543 3332 378999999999998765431 3455666421 1221 22689
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|+|++....++..+...++.++ ++|||||.+++..
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 9999998888876666788888 9999999999864
No 165
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.24 E-value=9.6e-12 Score=113.48 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=67.9
Q ss_pred CCCCCeEEEeCCcccchhhh---hcCCCeEEEEcCCHHHHHhC-------CC----------CCceEEeecccccCCCC-
Q 023470 95 LRPGSEVLDLMSSWVSHLPQ---EVSYKRVVGHGLNAQELAKN-------PR----------LEYFIVKDLNQDQKLEF- 153 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~---~~~~~~v~giD~s~~~l~~~-------~~----------~~~~~~~d~~~~~~l~~- 153 (282)
+.++.+|||||||+|..... ..+..+|+|+|+|+.+++.+ +. +..+..++... ...++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~-~~~~~~ 318 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV-DNNRVA 318 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST-TCHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc-cccccc
Confidence 45788999999999875433 23556899999999887655 21 22333333210 11112
Q ss_pred -CCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 154 -DHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 154 -~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..++||+|+++.++ +.+++..+|+++.++|||||++++.
T Consensus 319 ~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 24789999998776 4567888999999999999999886
No 166
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.24 E-value=2.3e-11 Score=102.69 Aligned_cols=93 Identities=10% Similarity=0.018 Sum_probs=70.0
Q ss_pred CCCeEEEeCCcccch---hhhh----cCCCeEEEEcCCHHHHHhCCC---CCceEEeecccccC---CCC-CCCceeEEE
Q 023470 97 PGSEVLDLMSSWVSH---LPQE----VSYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQK---LEF-DHCSFDAVV 162 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~----~~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~---l~~-~~~s~D~v~ 162 (282)
++.+|||||||+|.. ++.. .+..+|+|+|+|+.|++.++. +..+..+|. .+ ++. .+.+||+|+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~---~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDC---SDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCS---SCSGGGGGGSSSCSSEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcc---hhHHHHHhhccCCCCEEE
Confidence 467999999998763 3333 257899999999999887653 345667776 33 343 334799999
Q ss_pred ecchhhccCCHHHHHHHHHH-cccCCcEEEEEEc
Q 023470 163 CAVSVQYLQQPEKVFAEVFR-VLKPGGVFIVSFS 195 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r-~LkpgG~li~~~~ 195 (282)
+... |. +...++.++.| +|||||++++...
T Consensus 158 ~d~~--~~-~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 158 IDNA--HA-NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EESS--CS-SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECCc--hH-hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 8765 43 77889999998 9999999999753
No 167
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.24 E-value=4.3e-12 Score=106.07 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhh---hhc-----CCCeEEEEcCCHHHHHhCCC-------------CCceE
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLP---QEV-----SYKRVVGHGLNAQELAKNPR-------------LEYFI 141 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~---~~~-----~~~~v~giD~s~~~l~~~~~-------------~~~~~ 141 (282)
....+.+.+...+.++.+|||||||+|.... ... +..+|+|+|+|+.+++.++. +..+.
T Consensus 66 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 66 MHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKII 145 (227)
T ss_dssp HHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEE
Confidence 3334444444456788999999999876433 222 23699999999998865532 23455
Q ss_pred EeecccccCCC----CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 142 VKDLNQDQKLE----FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 142 ~~d~~~~~~l~----~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..|. .... ..+++||+|++..+++++ ++++.++|||||++++.++.
T Consensus 146 ~~d~---~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 146 HKNI---YQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp ECCG---GGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ECCh---HhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 5665 3332 345789999999998876 47899999999999998763
No 168
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.24 E-value=1.1e-11 Score=103.68 Aligned_cols=104 Identities=19% Similarity=0.261 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhh---cC------CCeEEEEcCCHHHHHhCCC-------------CCce
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQE---VS------YKRVVGHGLNAQELAKNPR-------------LEYF 140 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~---~~------~~~v~giD~s~~~l~~~~~-------------~~~~ 140 (282)
....+.+.+...+.++.+|||+|||+|...... .+ ..+|+|+|+++.+++.++. +..+
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 344444444434667889999999987644322 22 2599999999999876542 2345
Q ss_pred EEeecccccCCCCCC-CceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 141 IVKDLNQDQKLEFDH-CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 141 ~~~d~~~~~~l~~~~-~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
...|. .. ++++ ++||+|++..+++|+. +++.++|||||++++.+..
T Consensus 150 ~~~d~---~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 150 VEGDG---RK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EESCG---GG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EECCc---cc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 55555 22 3333 7899999999998875 7899999999999999764
No 169
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.23 E-value=4.7e-12 Score=112.78 Aligned_cols=95 Identities=13% Similarity=0.117 Sum_probs=71.2
Q ss_pred CCCeEEEeCCcccchhh---hhcCCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCceeEEEecch
Q 023470 97 PGSEVLDLMSSWVSHLP---QEVSYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~---~~~~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
++.+|||+|||+|.... ...+..+|+|+|+|+.|++.++.+ ..+...|. .. ..+++||+|+++..
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~---~~--~~~~~fD~Iv~~~~ 270 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV---FS--EVKGRFDMIISNPP 270 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST---TT--TCCSCEEEEEECCC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccc---cc--cccCCeeEEEECCC
Confidence 46789999999886543 333557999999999998765422 23444444 22 33678999999998
Q ss_pred hhc-----cCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 167 VQY-----LQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 167 l~~-----~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+|+ ..+...++++++++|||||.+++....
T Consensus 271 ~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 271 FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 875 345678999999999999999998654
No 170
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.23 E-value=6.5e-12 Score=111.20 Aligned_cols=90 Identities=12% Similarity=0.038 Sum_probs=71.2
Q ss_pred CeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEecch
Q 023470 99 SEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 99 ~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
.+|||+|||+|... +...+..+++++|+ +.+++.++. ...+..+|+ .+ +++ ++||+|++..+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~-~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM---LQ-EVP-SNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT---TT-CCC-SSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC---CC-CCC-CCCCEEEEchh
Confidence 89999999988643 33346789999999 888765432 345666666 33 444 67999999999
Q ss_pred hhccCCHH--HHHHHHHHcccCCcEEEEEE
Q 023470 167 VQYLQQPE--KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 167 l~~~~~~~--~~l~~~~r~LkpgG~li~~~ 194 (282)
+||.++.. .++++++++|||||++++..
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99998766 89999999999999999874
No 171
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.23 E-value=6.1e-11 Score=96.83 Aligned_cols=105 Identities=21% Similarity=0.188 Sum_probs=69.8
Q ss_pred HHHHHHHhh--CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCC--------C
Q 023470 86 TLTNLYRQM--LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEF--------D 154 (282)
Q Consensus 86 ~~~~~~~~~--~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~--------~ 154 (282)
.+.++.... +.++.+|||+|||+|....... ...+|+|+|+++.. ......+..+|+. +.+. .
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---~~~~v~~~~~D~~---~~~~~~~~~~~~~ 85 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---EIAGVRFIRCDIF---KETIFDDIDRALR 85 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---CCTTCEEEECCTT---SSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---cCCCeEEEEcccc---CHHHHHHHHHHhh
Confidence 455555543 5678999999999876433222 37899999999742 1234567788873 3321 1
Q ss_pred ---CCceeEEEecchhhcc-----------CCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 155 ---HCSFDAVVCAVSVQYL-----------QQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 155 ---~~s~D~v~~~~~l~~~-----------~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.++||+|+|....... ...+.+++.+.++|||||.|++.+..
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 1489999996432211 11246899999999999999987643
No 172
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.22 E-value=2.8e-11 Score=104.74 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=70.0
Q ss_pred CCCCeEEEeCCcccchhhh--hcCCCeEEEEcC-CHHHHHhCCCCC------------------ceEEeecccc-cCCC-
Q 023470 96 RPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGL-NAQELAKNPRLE------------------YFIVKDLNQD-QKLE- 152 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~-s~~~l~~~~~~~------------------~~~~~d~~~~-~~l~- 152 (282)
.++.+|||+|||+|..... ..+..+|+|+|+ |+.+++.++.+. .+...+.... ..+.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4678999999998864322 223459999999 899886543221 1221222110 1111
Q ss_pred -CCCCceeEEEecchhhccCCHHHHHHHHHHccc---C--CcEEEEEEc
Q 023470 153 -FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLK---P--GGVFIVSFS 195 (282)
Q Consensus 153 -~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~Lk---p--gG~li~~~~ 195 (282)
+++++||+|+++.+++|.++...+++++.++|| | ||.+++.+.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 035789999999999999999999999999999 9 999887654
No 173
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.22 E-value=1.3e-11 Score=110.38 Aligned_cols=95 Identities=12% Similarity=0.149 Sum_probs=72.2
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.++.+|||||||+|... +...+..+++++|+ +.+++.++. ...+...|+. + +++. .||+|++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~-~~~~-~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFF---E-PLPR-KADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTT---S-CCSS-CEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCC---C-CCCC-CccEEEE
Confidence 46789999999988643 33346789999999 888765432 3456666662 2 3333 4999999
Q ss_pred cchhhccCCHH--HHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AVSVQYLQQPE--KVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~--~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..++||+++.. .++++++++|||||++++....
T Consensus 256 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 256 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999998764 7999999999999999987543
No 174
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.22 E-value=9.1e-12 Score=105.83 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=67.4
Q ss_pred CCCeEEEeCCcccchhh---hh--cCCCeEEEEcCCHHHHHhCCC----C------------------------------
Q 023470 97 PGSEVLDLMSSWVSHLP---QE--VSYKRVVGHGLNAQELAKNPR----L------------------------------ 137 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~---~~--~~~~~v~giD~s~~~l~~~~~----~------------------------------ 137 (282)
++.+|||+|||+|.... .. .+..+|+|+|+|+.|++.++. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 46789999999886433 22 245799999999999876541 1
Q ss_pred ---Cc-------------eEEeecccccCCCC-----CCCceeEEEecchhhccCC---------HHHHHHHHHHcccCC
Q 023470 138 ---EY-------------FIVKDLNQDQKLEF-----DHCSFDAVVCAVSVQYLQQ---------PEKVFAEVFRVLKPG 187 (282)
Q Consensus 138 ---~~-------------~~~~d~~~~~~l~~-----~~~s~D~v~~~~~l~~~~~---------~~~~l~~~~r~Lkpg 187 (282)
.. +...|+ .+... ..++||+|+|+..+.+..+ ...++++++++||||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADV---FDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCT---TCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhccccccccccceeeccc---ccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 12 556665 33211 3458999999876655543 347999999999999
Q ss_pred cEEEEE
Q 023470 188 GVFIVS 193 (282)
Q Consensus 188 G~li~~ 193 (282)
|+++++
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999984
No 175
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.21 E-value=1.3e-11 Score=108.14 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=69.0
Q ss_pred CCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC------------CCceEEeecccccCCCC--CCCce
Q 023470 96 RPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR------------LEYFIVKDLNQDQKLEF--DHCSF 158 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~------------~~~~~~~d~~~~~~l~~--~~~s~ 158 (282)
+++.+|||||||.|...... .+..+|+++|+|+.+++.+++ ...+..+|. ..+.. .+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~~~~~f 170 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDG---LAFVRQTPDNTY 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---HHHHHSSCTTCE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH---HHHHHhccCCce
Confidence 56789999999988654433 246799999999999876542 224555555 33322 46889
Q ss_pred eEEEecchhhccCCH----HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 159 DAVVCAVSVQYLQQP----EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 159 D~v~~~~~l~~~~~~----~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|+|++.....+.+.. ..+++++.++|||||.+++...++
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 999998765544322 579999999999999999986654
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.21 E-value=1.3e-11 Score=110.12 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=70.2
Q ss_pred CCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCC---------CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNP---------RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~---------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|..... ..+..+|+|+|+|+ |++.++ ....+..+|+ .+++++ ++||+|++.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~~-~~~D~Ivs~ 123 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV---EEVSLP-EQVDIIISE 123 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEEEC
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcch---hhCCCC-CceeEEEEe
Confidence 4678999999998864332 23556999999996 664432 2235666666 566654 679999999
Q ss_pred chhhccC--CHHHHHHHHHHcccCCcEEEEEE
Q 023470 165 VSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 165 ~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
.+++|+. +....+.++.++|||||.++++.
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 124 PMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 8888875 45678889999999999998654
No 177
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.21 E-value=1.9e-11 Score=102.73 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=68.8
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCC-CCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLE-FDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~-~~~~s~D~v~~ 163 (282)
++.+|||||||+|... +...+..+|+|+|+|+.+++.++. +..+..+|.. ..++ ..+++||+|++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL--EQFENVNDKVYDMIFI 148 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG--GCHHHHTTSCEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH--HHHHhhccCCccEEEE
Confidence 6789999999988643 332357899999999999865542 3456666663 2233 33688999997
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
... ..+...+++++.++|||||.+++.
T Consensus 149 ~~~---~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 149 DAA---KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ETT---SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCc---HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 653 456688999999999999999885
No 178
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.20 E-value=4.8e-11 Score=106.78 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=73.3
Q ss_pred CCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
.+..+|||||||+|... +...+..+++++|+ +.+++.++.. ..+..+|+ .. +++ +||+|++.+++||+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~~--~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDM---FK-SIP--SADAVLLKWVLHDW 264 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCT---TT-CCC--CCSEEEEESCGGGS
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCcc---CC-CCC--CceEEEEcccccCC
Confidence 35689999999988654 33346789999999 7899887754 34556665 33 554 49999999999999
Q ss_pred CCHH--HHHHHHHHcccC---CcEEEEEE
Q 023470 171 QQPE--KVFAEVFRVLKP---GGVFIVSF 194 (282)
Q Consensus 171 ~~~~--~~l~~~~r~Lkp---gG~li~~~ 194 (282)
++.+ .++++++++||| ||++++..
T Consensus 265 ~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 265 NDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp CHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9877 899999999999 99998863
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.19 E-value=4.7e-11 Score=100.82 Aligned_cols=99 Identities=14% Similarity=0.066 Sum_probs=71.6
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|....... ...+|+++|+|+.+++.++. ...+...|+ .+..+++++||+|++
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~D~v~~- 164 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF---KDAEVPEGIFHAAFV- 164 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT---TTSCCCTTCBSEEEE-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh---hhcccCCCcccEEEE-
Confidence 4578899999999876432221 27899999999998865542 223444554 333225678999998
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEEEcCchhHH
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~ 201 (282)
+.+++..+++++.++|||||.+++..+......
T Consensus 165 ----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 197 (248)
T 2yvl_A 165 ----DVREPWHYLEKVHKSLMEGAPVGFLLPTANQVI 197 (248)
T ss_dssp ----CSSCGGGGHHHHHHHBCTTCEEEEEESSHHHHH
T ss_pred ----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 456788899999999999999999988653333
No 180
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.19 E-value=2.2e-11 Score=102.17 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=68.2
Q ss_pred CCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCC--CCceeEEE
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFD--HCSFDAVV 162 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~--~~s~D~v~ 162 (282)
++.+|||+|||+|.. ++...++.+|+++|+|+.+++.++. ...+..+|.. ..++.. +++||+|+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL--QLGEKLELYPLFDVLF 131 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG--GSHHHHTTSCCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH--HHHHhcccCCCccEEE
Confidence 678999999998764 3333457899999999998866542 2344455542 112322 57899999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+.... .+...+++++.++|||||.+++.
T Consensus 132 ~~~~~---~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 132 IDAAK---GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEGGG---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCCH---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 98764 36789999999999999999987
No 181
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.19 E-value=4.4e-11 Score=104.16 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=67.0
Q ss_pred CCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCCce
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~s~ 158 (282)
.++..+|||||||.|...... .+..+|+++|+|+++++.+++ +..+.++|.. .-+...+++|
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~~~~f 158 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQTSQTF 158 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC--C---CCCCCE
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH--HHHhhcCCCc
Confidence 346789999999988644332 246799999999999875532 2345566652 2233346889
Q ss_pred eEEEecchhhccCCH----HHHHHHHHHcccCCcEEEEEEcC
Q 023470 159 DAVVCAVSVQYLQQP----EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 159 D~v~~~~~l~~~~~~----~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|+|++.......+.. ..+++++.++|||||.+++...+
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 999997554332221 67999999999999999987543
No 182
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.19 E-value=2.3e-11 Score=105.17 Aligned_cols=99 Identities=8% Similarity=0.027 Sum_probs=71.5
Q ss_pred HHHhhCCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCce
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~ 158 (282)
.+...+.++.+|||+|||+|....... ...+|+|+|+|+.|++.++.+ ..+..+|. .++.. +++|
T Consensus 118 ~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~---~~~~~-~~~f 193 (278)
T 2frn_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---RDFPG-ENIA 193 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---TTCCC-CSCE
T ss_pred HHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH---HHhcc-cCCc
Confidence 344556778999999999886433222 233799999999998765421 24566666 45544 6889
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|+|++... .+...++.++.++|||||.+++....
T Consensus 194 D~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 194 DRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 99999543 34567899999999999999987543
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.19 E-value=2.5e-11 Score=102.12 Aligned_cols=93 Identities=17% Similarity=0.211 Sum_probs=68.5
Q ss_pred CCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCC-CceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDH-CSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~-~s~D~v~ 162 (282)
+.++.+|||+|||+|...... .+ .+|+|+|+|+.+++.++. ...+..+|. ..++++ ..||+|+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~----~~~~~~~~~fD~Ii 163 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG----SKGFPPKAPYDVII 163 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG----GGCCGGGCCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc----ccCCCCCCCccEEE
Confidence 557789999999988654332 24 799999999998866542 223445553 223333 3499999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+..+++++. .++.++|||||++++.+++..
T Consensus 164 ~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 164 VTAGAPKIP------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp ECSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred ECCcHHHHH------HHHHHhcCCCcEEEEEEecCC
Confidence 999999886 378999999999999987653
No 184
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.18 E-value=4.7e-11 Score=99.74 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=66.5
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhC----C--CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKN----P--RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~----~--~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||+|||+|... +... +..+|+|+|+|+.|++.+ + .+..+..+|+.....+...+++||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 446789999999987643 3332 357999999999876432 2 23456666663211111123589999987
Q ss_pred chhhccCCHH-HHHHHHHHcccCCcEEEEEEc
Q 023470 165 VSVQYLQQPE-KVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 165 ~~l~~~~~~~-~~l~~~~r~LkpgG~li~~~~ 195 (282)
.. .++.. .+++++.++|||||.+++.+.
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 65 23333 459999999999999998854
No 185
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=3.4e-11 Score=103.11 Aligned_cols=99 Identities=10% Similarity=0.008 Sum_probs=70.3
Q ss_pred CCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCCC------------CceEEeecccccCC-------CC
Q 023470 96 RPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPRL------------EYFIVKDLNQDQKL-------EF 153 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~------------~~~~~~d~~~~~~l-------~~ 153 (282)
.++.+|||+|||+|.. ++...+..+|+|+|+++.+++.++.+ ..+...|+ .++ ++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~---~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV---TLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT---TCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH---HHHhhhhhhhcc
Confidence 3567999999998864 33334568999999999988654321 24556666 333 25
Q ss_pred CCCceeEEEecchhh----------------c--cCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 154 DHCSFDAVVCAVSVQ----------------Y--LQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~----------------~--~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++++||+|+++--.. | ..+.+.+++.+.++|||||.+++..+..
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 578999999982211 1 1246789999999999999999987643
No 186
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.15 E-value=7e-11 Score=106.01 Aligned_cols=91 Identities=18% Similarity=0.155 Sum_probs=68.5
Q ss_pred CCCeEEEeCCcccc--hhhhhcCCCeEEEEcCCHHHHHhCC------C---CCceEEeecccccCCCCCCCceeEEEec-
Q 023470 97 PGSEVLDLMSSWVS--HLPQEVSYKRVVGHGLNAQELAKNP------R---LEYFIVKDLNQDQKLEFDHCSFDAVVCA- 164 (282)
Q Consensus 97 ~~~~vLDiGcG~~~--~~~~~~~~~~v~giD~s~~~l~~~~------~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~- 164 (282)
++.+|||||||+|. .++...+..+|+|+|.|+ |++.++ + ...++.+++ +++.++ ++||+|+|-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~---~~~~lp-e~~DvivsE~ 157 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPV---ETVELP-EQVDAIVSEW 157 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEECCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeee---eeecCC-ccccEEEeec
Confidence 67899999999874 344445677999999995 554332 1 234566666 667665 679999994
Q ss_pred --chhhccCCHHHHHHHHHHcccCCcEEEE
Q 023470 165 --VSVQYLQQPEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 165 --~~l~~~~~~~~~l~~~~r~LkpgG~li~ 192 (282)
..+.+-...+.++....|+|||||.++-
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 5666777889999999999999999863
No 187
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=2.9e-11 Score=105.90 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=67.7
Q ss_pred HHHHHHh-hCCCCCeEEEeCCcccchhhhhcCCCeEEEEcC----CHHHHHhCC--CC----CceEEe-ecccccCCCCC
Q 023470 87 LTNLYRQ-MLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGL----NAQELAKNP--RL----EYFIVK-DLNQDQKLEFD 154 (282)
Q Consensus 87 ~~~~~~~-~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~----s~~~l~~~~--~~----~~~~~~-d~~~~~~l~~~ 154 (282)
+..+... .++++.+|||+|||+|..........+|+|+|+ ++.+++... .. ..+..+ |+ ..+ +
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~---~~l--~ 145 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDV---FFI--P 145 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCT---TTS--C
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccc---ccC--C
Confidence 3333433 345778999999998864433222268999999 565443221 11 233333 33 344 3
Q ss_pred CCceeEEEecchhh---ccCCHH---HHHHHHHHcccCCcEEEEEEcCc
Q 023470 155 HCSFDAVVCAVSVQ---YLQQPE---KVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 155 ~~s~D~v~~~~~l~---~~~~~~---~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.++||+|+|..+++ +..+.. .+|.++.++|||||.|++.+..+
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 57899999986653 222322 47899999999999999987655
No 188
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=1.2e-10 Score=98.82 Aligned_cols=93 Identities=13% Similarity=0.089 Sum_probs=67.4
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCC--CCCceeEE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEF--DHCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~--~~~s~D~v 161 (282)
++.+|||||||+|... +...+ ..+|+|+|+|+.+++.++. +..+..+|... .++. ..++||+|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~--~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ--SLESLGECPAFDLI 140 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH--HHHTCCSCCCCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHhcCCCCCeEEE
Confidence 6789999999987643 33334 7899999999998865542 23556666521 1222 23589999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
++... ..+...+++++.++|||||.+++..
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 141 FIDAD---KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EECSC---GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EECCc---hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 98653 4455789999999999999998874
No 189
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.14 E-value=5e-11 Score=100.36 Aligned_cols=93 Identities=19% Similarity=0.187 Sum_probs=56.6
Q ss_pred CCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCCC-CceEEe---ecccc--cCCCCCCCceeEEEecchhh
Q 023470 97 PGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPRL-EYFIVK---DLNQD--QKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~-~~~~~~---d~~~~--~~l~~~~~s~D~v~~~~~l~ 168 (282)
++.+|||||||+|...... .+..+|+|+|+|+.|++.++.. ...... ++... .+++ ...+|.+.+..++.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTSIDVSFI 114 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEECCSSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcC--cCCCCEEEEEEEhh
Confidence 4669999999998654332 2335999999999998664322 111111 11000 1111 11233333333333
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
++ ..++++++|+|||||.+++.+
T Consensus 115 ~l---~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 SL---DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred hH---HHHHHHHHHhccCCCEEEEEE
Confidence 33 779999999999999999875
No 190
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.13 E-value=6.2e-11 Score=102.20 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=70.5
Q ss_pred CCCCCeEEEeCCcccchh---hhh-cCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQE-VSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~-~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
+.++.+|||+|||.|... +.. .+..+|+++|+|+.+++.++.+ ..+...|+ .+. +++++||+|
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-~~~~~~D~V 185 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI---SEG-FDEKDVDAL 185 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG---GGC-CSCCSEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH---HHc-ccCCccCEE
Confidence 457889999999987543 333 2478999999999988665422 23445554 333 556789999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++ +.+++..+++++.++|||||.+++..+..
T Consensus 186 ~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 186 FL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp EE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred EE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 98 45688899999999999999999987643
No 191
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.11 E-value=6.1e-11 Score=110.03 Aligned_cols=93 Identities=11% Similarity=0.051 Sum_probs=69.3
Q ss_pred CCCCeEEEeCCcccchhhh--hcCCCeEEEEcCCHHHHHhCC---------CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 96 RPGSEVLDLMSSWVSHLPQ--EVSYKRVVGHGLNAQELAKNP---------RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~--~~~~~~v~giD~s~~~l~~~~---------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++.+|||||||+|..... ..+..+|+|+|+|+ |++.++ ....+..+|+ .+++++ ++||+|+|.
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~---~~~~~~-~~fD~Ivs~ 231 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV---EEVSLP-EQVDIIISE 231 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEECC
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECch---hhCccC-CCeEEEEEe
Confidence 3578999999998864322 23567999999998 775443 2245667776 555554 589999999
Q ss_pred chhhccCCH--HHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQP--EKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~--~~~l~~~~r~LkpgG~li~~ 193 (282)
..++|+.+. ...+.++.++|||||.+++.
T Consensus 232 ~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 232 PMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 888887543 55788999999999999864
No 192
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.11 E-value=7.2e-11 Score=97.47 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=66.5
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
++.+|||+|||+|... +...+ +.+|+++|+|+.+++.++++ ..+..+|.. ..++..++ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL--GIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH--HHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH--HHhccCCC-CCEEEE
Confidence 5679999999988643 33334 78999999999998765532 234555552 12243346 999998
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
... ..+...+++++.++|||||.+++.
T Consensus 133 ~~~---~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 133 DCD---VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ETT---TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCC---hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 743 457788999999999999999986
No 193
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.09 E-value=4e-10 Score=100.69 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=70.1
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCC--------CCCceEEeecccccCCCCCCCceeEEEecc
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNP--------RLEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~--------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
+..+|||||||.|..+ ++..+..+++..|. +.+++.++ .+..+..+|+ ...+.+ .+|+|++..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLP--EADLYILAR 252 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCT---TTSCCC--CCSEEEEES
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcc---ccCCCC--CceEEEeee
Confidence 4578999999988654 44458889999997 66765443 2345667776 333443 479999999
Q ss_pred hhhccCCHH--HHHHHHHHcccCCcEEEEEE
Q 023470 166 SVQYLQQPE--KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 166 ~l~~~~~~~--~~l~~~~r~LkpgG~li~~~ 194 (282)
+||+.+|.+ .+|++++++|+|||++++..
T Consensus 253 vlh~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 253 VLHDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ecccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 999998764 58999999999999988763
No 194
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.09 E-value=1.9e-10 Score=99.76 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=67.5
Q ss_pred hCCCCCeEEEeCCc------ccc-hhhhhcC-CCeEEEEcCCHHHHHhCCCCCce-EEeecccccCCCCCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSS------WVS-HLPQEVS-YKRVVGHGLNAQELAKNPRLEYF-IVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG------~~~-~~~~~~~-~~~v~giD~s~~~l~~~~~~~~~-~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
.++++.+|||+||| .|. .++...+ ..+|+|+|+|+. + ....+ ..+|+ .+++++ ++||+|+|+
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----~~v~~~i~gD~---~~~~~~-~~fD~Vvsn 130 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----SDADSTLIGDC---ATVHTA-NKWDLIISD 130 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----CSSSEEEESCG---GGCCCS-SCEEEEEEC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----CCCEEEEECcc---ccCCcc-CcccEEEEc
Confidence 35678899999993 343 3333344 689999999998 2 24567 88888 555553 689999997
Q ss_pred chhhc-----------cCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 165 VSVQY-----------LQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 165 ~~l~~-----------~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
...++ ....+.+++++.|+|||||.|++.+..
T Consensus 131 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 131 MYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 54221 112347999999999999999997654
No 195
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.08 E-value=1.1e-10 Score=104.30 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=74.9
Q ss_pred CCCCCeEEEeCCcccchhhhh---c-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE---V-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~---~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
..++.+|||+|||+|...... . +..+|+|+|+|+.|++.++. ...+...|+ .+++.+.++||+|+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~---~~~~~~~~~~D~Ii 277 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA---RHLPRFFPEVDRIL 277 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG---GGGGGTCCCCSEEE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh---hhCccccCCCCEEE
Confidence 356789999999988654322 2 45899999999999876542 346777777 66776667799999
Q ss_pred ecchhhc--c------CCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 163 CAVSVQY--L------QQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 163 ~~~~l~~--~------~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
++--... . .....+++++.++|||||.+++.++++..
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~ 322 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPAL 322 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHH
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHH
Confidence 9632211 1 12256899999999999999999887544
No 196
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.08 E-value=1.2e-10 Score=97.28 Aligned_cols=91 Identities=9% Similarity=0.150 Sum_probs=64.8
Q ss_pred CCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC----------CCceEEeecccccCCC-CCCCceeEEE
Q 023470 98 GSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR----------LEYFIVKDLNQDQKLE-FDHCSFDAVV 162 (282)
Q Consensus 98 ~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~----------~~~~~~~d~~~~~~l~-~~~~s~D~v~ 162 (282)
+.+|||||||+|.. ++... ++.+|+++|+|+++++.++. +..+..+|.. +.++ +++++||+|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~--~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL--DVMSRLANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH--HHGGGSCTTCEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH--HHHHHhcCCCcCeEE
Confidence 34899999997753 33433 47899999999999866542 1234444442 1222 3368999999
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+... ..+...+++++.++|||||.+++.
T Consensus 135 ~d~~---~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 135 GQVS---PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ECCC---TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred EcCc---HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 8754 345677999999999999999985
No 197
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=7.4e-11 Score=98.28 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=66.3
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCC-CC----CCce
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLE-FD----HCSF 158 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~-~~----~~s~ 158 (282)
++.+|||+|||+|... +...+ +.+|+|+|+|+.+++.++. ...+..+|... .++ +. .++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD--TLAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH--HHHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH--HHHHhhhccCCCCc
Confidence 5679999999987643 33333 7899999999998865542 23455555521 111 11 1789
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|+|++... ..+...+++++.++|||||.+++..
T Consensus 142 D~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDAD---KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99997653 3456789999999999999999874
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.07 E-value=1.5e-10 Score=101.88 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=67.1
Q ss_pred CCCCCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~v~ 162 (282)
..++.+|||+|||.|.. ++... +..+|+|+|+|+.+++.++. +..+...|. ..++..+++||+|+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIGELNVEFDKIL 192 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcccccccCCEEE
Confidence 45788999999998764 33333 35799999999998865442 224445555 44443457899999
Q ss_pred ec------chhhccCCH----------------HHHHHHHHHcccCCcEEEEEEc
Q 023470 163 CA------VSVQYLQQP----------------EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 163 ~~------~~l~~~~~~----------------~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+. .++++.++. ..+++++.++|||||++++++.
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 84 234333321 4789999999999999998753
No 199
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.07 E-value=1e-10 Score=98.70 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=72.2
Q ss_pred HHhhCCCCCeEEEeCCcccchhh---hhcCCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCceeE
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLP---QEVSYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~---~~~~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
+...+++..+|||||||+|-... ...+..+|+|+|+++.|++.++.+ ..+.+.|. ....+.+.||+
T Consensus 126 i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~----~~~~p~~~~Dv 201 (281)
T 3lcv_B 126 LFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADL----LEDRLDEPADV 201 (281)
T ss_dssp HGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCT----TTSCCCSCCSE
T ss_pred HHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeee----cccCCCCCcch
Confidence 34455667899999999875433 334788999999999999755422 24555554 23335678999
Q ss_pred EEecchhhccCCHHH-HHHHHHHcccCCcEEEEEEcC
Q 023470 161 VVCAVSVQYLQQPEK-VFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 161 v~~~~~l~~~~~~~~-~l~~~~r~LkpgG~li~~~~~ 196 (282)
|+++-+++|+++.++ ..-++...|+|+|.++ ++|.
T Consensus 202 aL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV-Sfp~ 237 (281)
T 3lcv_B 202 TLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV-TFPT 237 (281)
T ss_dssp EEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE-EEEC
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE-eccc
Confidence 999999999975543 3339999999988765 4444
No 200
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.07 E-value=1e-10 Score=97.81 Aligned_cols=95 Identities=15% Similarity=0.071 Sum_probs=70.2
Q ss_pred CCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 96 RPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
.+..+|||||||+|.......+..+++|+|+++.|++.++.. ..+.++|. ...+. .++||+|++.-++|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~---~~~~~-~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDV---LCAPP-AEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCT---TTSCC-CCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeec---ccCCC-CCCcchHHHHHHHH
Confidence 567899999999887655544889999999999999765432 24566676 44444 45899999999999
Q ss_pred ccCCHHH-HHHHHHHcccCCcEEEEEEc
Q 023470 169 YLQQPEK-VFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 169 ~~~~~~~-~l~~~~r~LkpgG~li~~~~ 195 (282)
|+.+.+. ...++...|+++|. ++++|
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~v-vVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRM-AVSFP 206 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEE-EEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCE-EEEcC
Confidence 9964433 44488889999855 55656
No 201
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.07 E-value=5.3e-11 Score=105.46 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=68.4
Q ss_pred CCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCCCC----------CceEEeecccccCCCC----CCCceeE
Q 023470 96 RPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNPRL----------EYFIVKDLNQDQKLEF----DHCSFDA 160 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~~~----------~~~~~~d~~~~~~l~~----~~~s~D~ 160 (282)
.++.+|||+|||+|...... ..+.+|+|+|+|+.|++.++.+ ..+...|+ .++.. .+++||+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~---~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA---MKFIQREERRGSTYDI 228 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH---HHHHHHHHHHTCCBSE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcH---HHHHHHHHhcCCCceE
Confidence 46779999999988654332 2455999999999998765422 34555554 22211 1468999
Q ss_pred EEec---c-------hhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 161 VVCA---V-------SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 161 v~~~---~-------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|++. + ++++..+...+++++.++|||||.++++...
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9994 2 2334456678999999999999998887654
No 202
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.07 E-value=1.4e-10 Score=100.57 Aligned_cols=93 Identities=11% Similarity=0.155 Sum_probs=66.7
Q ss_pred CCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCce---eEE
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSF---DAV 161 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~---D~v 161 (282)
++.+|||+|||+|.. ++.. +..+|+|+|+|+++++.++.+ ..+..+|.. . +++ ++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~---~-~~~-~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL---E-PFK-EKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT---G-GGG-GGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch---h-hcc-cccCCCCEE
Confidence 567999999998864 3444 688999999999998765422 345666652 2 222 478 999
Q ss_pred Eec------------chhhccC--------CHHHHHHHHH-HcccCCcEEEEEEcC
Q 023470 162 VCA------------VSVQYLQ--------QPEKVFAEVF-RVLKPGGVFIVSFSN 196 (282)
Q Consensus 162 ~~~------------~~l~~~~--------~~~~~l~~~~-r~LkpgG~li~~~~~ 196 (282)
+++ .+. |.+ +...+++++. +.|||||.+++++..
T Consensus 197 vsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp EECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred EEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 997 122 221 2236899999 999999999998654
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.06 E-value=4.3e-10 Score=99.62 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=69.0
Q ss_pred CCCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC------------CCceEEeecccccCC-CCCCCce
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR------------LEYFIVKDLNQDQKL-EFDHCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~------------~~~~~~~d~~~~~~l-~~~~~s~ 158 (282)
.+++.+|||||||.|....... +..+|+++|+|+.+++.+++ ...+..+|... .+ ..++++|
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~--~l~~~~~~~f 195 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA--FLKNAAEGSY 195 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH--HHHTSCTTCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH--HHHhccCCCc
Confidence 3466899999999886544332 46799999999999876542 22445555421 11 2345789
Q ss_pred eEEEecch--hhccCC--HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 159 DAVVCAVS--VQYLQQ--PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 159 D~v~~~~~--l~~~~~--~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|+|++... +++..+ ...+++++.++|||||.+++...+
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99999654 221111 367999999999999999997443
No 204
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=2.2e-10 Score=98.62 Aligned_cols=96 Identities=17% Similarity=0.092 Sum_probs=72.0
Q ss_pred HhhCCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCCCceeE
Q 023470 92 RQMLRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 92 ~~~~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
...+.++.+|||+|||+|... +...+..+|+|+|+|+.+++.++. +..+..+|. .+++. .++||+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~---~~~~~-~~~~D~ 189 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN---RDVEL-KDVADR 189 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG---GGCCC-TTCEEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh---HHcCc-cCCceE
Confidence 345678899999999987643 333346699999999999865542 234666666 44433 578999
Q ss_pred EEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 161 VVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 161 v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|++.... +...++.++.++|||||.++++..
T Consensus 190 Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 190 VIMGYVH----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEECCCS----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCcc----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9998653 667799999999999999998754
No 205
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.05 E-value=8e-10 Score=94.65 Aligned_cols=90 Identities=17% Similarity=0.055 Sum_probs=66.3
Q ss_pred CCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCCCC------------ceEEeecccccCCCCCCCceeEE
Q 023470 96 RPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPRLE------------YFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~------------~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
+.+.+|||||||.|...... .+ .+|+++|+++++++.+++.. .+..+|. .... ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~---~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG---GSCC---CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH---HHHH---hhCCEE
Confidence 45679999999987644322 15 89999999999998877542 2223333 2222 789999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++. ..++..+++++.++|||||.+++...++
T Consensus 144 i~d-----~~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 144 FCL-----QEPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp EES-----SCCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred EEC-----CCChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 986 3467779999999999999999876544
No 206
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.05 E-value=3.9e-10 Score=93.78 Aligned_cols=95 Identities=16% Similarity=0.094 Sum_probs=66.2
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCC---------CCceEEeecccc-cCCCCC-CCceeEE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQD-QKLEFD-HCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~-~~l~~~-~~s~D~v 161 (282)
++.+|||||||+|... +...+ +.+|+|+|+++.+++.++. ...+..+|.... ..++.. .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 6789999999988643 33334 7899999999998865432 234555655210 011111 2679999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
++.... .+...+++++.++|||||.+++..
T Consensus 138 ~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 138 FIDADK---QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EECSCG---GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEcCCc---HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 987653 345789999999999999888873
No 207
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.05 E-value=2.5e-10 Score=96.22 Aligned_cols=95 Identities=12% Similarity=0.212 Sum_probs=66.9
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCCC---------CceEEeecccc-cCC-----------
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQD-QKL----------- 151 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~-~~l----------- 151 (282)
++.+|||||||+|... +...+ +.+|+++|+++.+++.++.. ..+..+|.... ..+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 6789999999987643 33333 68999999999988665422 24445554210 001
Q ss_pred CCCC--CceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 152 EFDH--CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 152 ~~~~--~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
.+++ ++||+|++..... +...+++++.++|||||++++..
T Consensus 140 ~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1333 7899999986543 44689999999999999999874
No 208
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.05 E-value=8.8e-11 Score=99.46 Aligned_cols=92 Identities=11% Similarity=0.108 Sum_probs=66.1
Q ss_pred CCCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCC-----CCCce
Q 023470 97 PGSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEF-----DHCSF 158 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~-----~~~s~ 158 (282)
++.+|||||||+|.. ++... ++.+|+|+|+|+++++.++. +..+..+|.. +.++. .+++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~--~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL--DTLHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH--HHHHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHHHHHhhccCCCCE
Confidence 567999999998753 33333 37899999999988765432 2345566652 11221 14789
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
|+|++... ..+...+++++.++|||||.+++.
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 138 DFIFIDAD---KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 99998764 345677999999999999999986
No 209
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.04 E-value=3.3e-10 Score=99.61 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=70.2
Q ss_pred CCCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCCce
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~s~ 158 (282)
.+++.+|||||||.|....... +..+|+++|+++.+++.+++ ...+..+|.. ..++..+++|
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~--~~l~~~~~~f 152 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR--AYLERTEERY 152 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH--HHHHHCCCCE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH--HHHHhcCCCc
Confidence 3566899999999886544332 46799999999999865432 2244555542 1133346789
Q ss_pred eEEEecchhhc---cC--C--HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 159 DAVVCAVSVQY---LQ--Q--PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 159 D~v~~~~~l~~---~~--~--~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|+|++....++ .+ . ...+++++.++|||||.+++...+
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99999866544 11 1 367999999999999999987543
No 210
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.03 E-value=2.6e-10 Score=98.82 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=69.5
Q ss_pred CCCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC------------CCceEEeecccccCCCCCCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR------------LEYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~------------~~~~~~~d~~~~~~l~~~~~s~D 159 (282)
.+++.+|||||||.|....... +..+|+++|+++.+++.+++ ...+.++|.. ..++..+++||
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~--~~l~~~~~~fD 153 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDAS--KFLENVTNTYD 153 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHH--HHHHHCCSCEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChH--HHHHhCCCCce
Confidence 3466899999999886544332 46799999999999875432 1234555542 11222257899
Q ss_pred EEEecchhhccC--CH--HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 160 AVVCAVSVQYLQ--QP--EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 160 ~v~~~~~l~~~~--~~--~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|++....++.+ .. ..+++++.++|||||.+++...++
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 999965433222 22 689999999999999999986543
No 211
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.02 E-value=5e-10 Score=98.05 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=67.5
Q ss_pred CeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCC--CCCCCceeEEEecc
Q 023470 99 SEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKL--EFDHCSFDAVVCAV 165 (282)
Q Consensus 99 ~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l--~~~~~s~D~v~~~~ 165 (282)
.+|||||||.|... ++..+..+|+++|+++.+++.+++. ..+.++|. ..+ .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da---~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDA---RMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCH---HHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcH---HHHHhhccCCCCCEEEECC
Confidence 48999999987543 3334678999999999999766432 24555655 222 23467899999974
Q ss_pred hhhcc-C---CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 166 SVQYL-Q---QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 166 ~l~~~-~---~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+.. + ...+++++++++|||||.+++...+
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 33321 1 1267999999999999999987653
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.02 E-value=5.8e-10 Score=98.33 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=68.8
Q ss_pred CCCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCCC------------CceEEeecccccCCCCCCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPRL------------EYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~~------------~~~~~~d~~~~~~l~~~~~s~D 159 (282)
.+++.+|||||||.|....... +..+|+++|+|+++++.++++ ..+..+|.. ..++..+++||
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~--~~l~~~~~~fD 191 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDAS--KFLENVTNTYD 191 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHH--HHHHHCCSCEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHH--HHHhhcCCCce
Confidence 3466899999999886543332 468999999999998754321 234455542 11222357899
Q ss_pred EEEecchhhc--cCCH--HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 160 AVVCAVSVQY--LQQP--EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 160 ~v~~~~~l~~--~~~~--~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|++...-.. .... ..+++++.++|||||.+++...++
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 9998753111 1111 689999999999999999986554
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=9.9e-10 Score=89.78 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=63.0
Q ss_pred CCCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
..++.+|||+|||+|...... .+..+|+|+|+|+.|++.++. ...+..+|+ ..++ ++||+|+++..++|
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~---~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV---SEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG---GGCC---CCEEEEEECCCC--
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcH---HHCC---CCeeEEEECCCchh
Confidence 346789999999988654322 244589999999999976654 356777777 4553 68999999999988
Q ss_pred cCC--HHHHHHHHHHcccCCcEEEEE
Q 023470 170 LQQ--PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 170 ~~~--~~~~l~~~~r~LkpgG~li~~ 193 (282)
..+ ...+++++.++| |+ +++.
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp -----CHHHHHHHHHHE--EE-EEEE
T ss_pred ccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 864 346899999998 44 4444
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.02 E-value=4.8e-10 Score=96.71 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=69.3
Q ss_pred CCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC------------CCceEEeecccccCCCCCCCceeE
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR------------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~------------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
+.+.+|||||||.|....... +..+|+++|+++++++.+++ ...+..+|.. .-++..+++||+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF--MHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH--HHHHTCCSCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH--HHHhhCCCCeeE
Confidence 456899999999886543332 45799999999999875542 1244555542 113333578999
Q ss_pred EEecchhhccCC----HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQQ----PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~~----~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|++....++.+. ..++++++.++|||||.+++...++
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 999754322211 2679999999999999999986543
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.02 E-value=4.9e-10 Score=97.70 Aligned_cols=100 Identities=12% Similarity=0.137 Sum_probs=67.3
Q ss_pred CCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC------------CCceEEeecccccCCCCCCCceeE
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR------------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~------------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
+.+.+|||||||.|....... +..+|+++|+|+.+++.+++ ...+..+|.. ..++..+++||+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~--~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA--EYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH--HHGGGCSSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH--HHHhhCCCCceE
Confidence 456899999999886543332 46799999999999865442 2234455542 113334578999
Q ss_pred EEecchhhccC-----CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQ-----QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~-----~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|++...-.++. ....+++++.++|||||.+++...++
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 99864322121 22679999999999999999986554
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.00 E-value=2.8e-10 Score=99.98 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=65.3
Q ss_pred CCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCCC------------CceEEeecccccCCCCCCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPRL------------EYFIVKDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~~------------~~~~~~d~~~~~~l~~~~~s~D 159 (282)
.+++.+|||||||.|...... .+..+|+++|+|+.+++.+++. ..+..+|.. ..++..+++||
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~~~~fD 183 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF--EFLKNHKNEFD 183 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH--HHHHHCTTCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHH--HHHHhcCCCce
Confidence 345689999999988654333 2468999999999998765421 233444431 11223467899
Q ss_pred EEEecchhhccCCH----HHHHHHHHHcccCCcEEEEEEcC
Q 023470 160 AVVCAVSVQYLQQP----EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 160 ~v~~~~~l~~~~~~----~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+|++...-+..+.. ..+++++.++|||||.+++...+
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 99986542221111 57899999999999999998643
No 217
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.00 E-value=3.4e-10 Score=97.52 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=67.9
Q ss_pred CCCCCeEEEeCCcccch---hhhhcCC-CeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCC----CCCce
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEVSY-KRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEF----DHCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~~~-~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~----~~~s~ 158 (282)
..++.+|||+|||.|.. ++...++ .+|+|+|+|+.+++.++. +..+...|. ..++. .+++|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADM---RKYKDYLLKNEIFF 157 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH---HHHHHHHHHTTCCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh---HhcchhhhhccccC
Confidence 45788999999998764 3333344 899999999998865432 234445554 33332 25789
Q ss_pred eEEEec------chhh------------ccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 159 DAVVCA------VSVQ------------YLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 159 D~v~~~------~~l~------------~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|+|++. .+++ .......+++++.++|||||++++++.
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 999987 2221 224557899999999999999999864
No 218
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.99 E-value=4.4e-10 Score=95.39 Aligned_cols=93 Identities=11% Similarity=0.111 Sum_probs=66.8
Q ss_pred CCCeEEEeCCcccch---hhhhcC-CCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCC-C-----CCCc
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVS-YKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLE-F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~-~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~-~-----~~~s 157 (282)
++.+|||||||+|.. ++...+ +.+|+++|+|+++++.++.+ ..+..+|.. +.++ + ++++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~--~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL--PVLDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH--HHHHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH--HHHHHHHhccCCCCC
Confidence 567999999998753 334334 78999999999988665421 234555542 1122 1 1578
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|++... ..+...+++++.++|||||.+++..
T Consensus 157 fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999998754 3467889999999999999999863
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.99 E-value=5.6e-10 Score=93.74 Aligned_cols=95 Identities=9% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCCC---------CceEEeecccc-cCCCCCC--CceeE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQD-QKLEFDH--CSFDA 160 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~-~~l~~~~--~s~D~ 160 (282)
++.+|||||||+|... +...+ +.+|+++|+|+.+++.++.. ..+..++.... ..++..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999988643 33333 67999999999998765422 23455554210 1233333 78999
Q ss_pred EEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 161 VVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 161 v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|++... ..+...+++++.++|||||.+++..
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 998754 2456789999999999999999873
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.98 E-value=1.1e-09 Score=95.72 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=66.9
Q ss_pred CCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCCC------------CceEEeecccccCCCCCCCceeE
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPRL------------EYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~~------------~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
+++.+|||||||+|....... +..+|+++|+++++++.+++. ..+..+|.. ..++..+++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~--~~l~~~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF--EFMKQNQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH--HHHHTCSSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHH--HHHhhCCCCceE
Confidence 466899999999886544332 457999999999998765432 234455542 113334678999
Q ss_pred EEecchhhccC----CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 161 VVCAVSVQYLQ----QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 161 v~~~~~l~~~~----~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
|++....+..+ ....+++++.++|||||.+++...+
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99965432221 1246899999999999999988644
No 221
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.96 E-value=2.1e-10 Score=97.40 Aligned_cols=96 Identities=6% Similarity=0.001 Sum_probs=60.1
Q ss_pred CCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCC-CCC---CCceeE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKL-EFD---HCSFDA 160 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l-~~~---~~s~D~ 160 (282)
++.+|||+|||+|... +...+..+|+|+|+|+.|++.++.+ ..+..+|.... -+ +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-LMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-STTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh-hhhhhhcccCCcccE
Confidence 4679999999988643 3333568999999999998765421 34566665210 01 333 368999
Q ss_pred EEecchhhccC---------------CHHHHHHHHHHcccCCcEEEEE
Q 023470 161 VVCAVSVQYLQ---------------QPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 161 v~~~~~l~~~~---------------~~~~~l~~~~r~LkpgG~li~~ 193 (282)
|+++-..++.. ....++.+++|+|||||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99984433322 1124678899999999998654
No 222
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.96 E-value=1.6e-09 Score=99.94 Aligned_cols=98 Identities=17% Similarity=0.277 Sum_probs=69.3
Q ss_pred CCCCCeEEEeCCcccch---hhhhcCC-CeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC--CCCCceeE
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEVSY-KRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE--FDHCSFDA 160 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~~~-~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~--~~~~s~D~ 160 (282)
..++.+|||+|||.|.. ++...++ .+|+|+|+|+.+++.++. +..+...|. ..++ +++++||+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDA---RKAPEIIGEEVADK 333 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCT---TCCSSSSCSSCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcCh---hhcchhhccCCCCE
Confidence 45788999999997753 3443444 799999999998854332 233444554 4443 55578999
Q ss_pred EEe------cchhhccCCH----------------HHHHHHHHHcccCCcEEEEEEc
Q 023470 161 VVC------AVSVQYLQQP----------------EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 161 v~~------~~~l~~~~~~----------------~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|++ ..++++.++. ..+++++.++|||||.+++++.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 996 2445554443 5689999999999999998764
No 223
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.95 E-value=7.4e-10 Score=92.61 Aligned_cols=100 Identities=7% Similarity=-0.077 Sum_probs=69.1
Q ss_pred HHHhhCCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCc
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s 157 (282)
.+...++++.+|||||||+|... +...+..+|+|+|+++.+++.++.+ ..+..+|. .+...+++.
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~---l~~~~~~~~ 90 (230)
T 3lec_A 14 KVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG---LSAFEEADN 90 (230)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG---GGGCCGGGC
T ss_pred HHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch---hhccccccc
Confidence 34567788899999999988633 2322456899999999998765422 34555665 333333347
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|+.....-. -...++.+..+.|+++|+|+++-
T Consensus 91 ~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 91 IDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp CCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred cCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEEC
Confidence 999886543221 23568888999999999999884
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.94 E-value=2e-09 Score=93.09 Aligned_cols=99 Identities=11% Similarity=0.149 Sum_probs=66.5
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC------------------CceEEeecccccCCCCC
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL------------------EYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~------------------~~~~~~d~~~~~~l~~~ 154 (282)
.+++.+|||||||.|....... +..+|+++|+++.+++.+++. ..+..+|.. ..++.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~--~~l~~- 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF--EFIKN- 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH--HHHHH-
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchH--HHhcc-
Confidence 3567899999999886443322 567999999999998654321 233444431 11222
Q ss_pred CCceeEEEecchhhccC--C--HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 155 HCSFDAVVCAVSVQYLQ--Q--PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~--~--~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++||+|++....+..+ . ...++++++++|||||.+++...+
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 57899999875432211 1 267899999999999999987544
No 225
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.93 E-value=9.8e-10 Score=91.64 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=66.2
Q ss_pred CCCCeEEEeCCcccchh---hhhcC-CCeEEEEcCCHHHHHhCCC---------CCceEEeecccc-cCCCCC--CCcee
Q 023470 96 RPGSEVLDLMSSWVSHL---PQEVS-YKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQD-QKLEFD--HCSFD 159 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~~~~~-~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~-~~l~~~--~~s~D 159 (282)
.++.+|||+|||+|... +...+ ..+|+++|+|+.+++.++. ...+..+|.... ..++.. .++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 36789999999987643 33333 6899999999998865542 234555554210 111111 16899
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
+|++... ..+...+++++.++|||||.+++..
T Consensus 148 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9999654 3456789999999999999999863
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.92 E-value=8.9e-10 Score=99.66 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=68.8
Q ss_pred HHHhhCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCceeEE
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
.+...+.++.+|||+|||+|...... ..+.+|+|+|+|+.|++.++.+ ..+...|+.. .++...+.||+|
T Consensus 207 ~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~--~l~~~~~~fD~I 284 (393)
T 4dmg_A 207 LFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALP--TLRGLEGPFHHV 284 (393)
T ss_dssp HHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHH--HHHTCCCCEEEE
T ss_pred HHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHH--HHHHhcCCCCEE
Confidence 34445556899999999988654332 2456799999999999765532 1344555421 121112349999
Q ss_pred Eecchh---------hccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 162 VCAVSV---------QYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 162 ~~~~~l---------~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++.--- ....+...++..+.++|||||.+++....
T Consensus 285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 986321 12234467899999999999999866543
No 227
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.91 E-value=3.9e-09 Score=94.90 Aligned_cols=95 Identities=12% Similarity=-0.046 Sum_probs=68.5
Q ss_pred CCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccC-CCC-CCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQK-LEF-DHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~-l~~-~~~s~D~v~~ 163 (282)
++.+|||+| |+|...... .+..+|+|+|+|+.|++.+++ +..+..+|+ .. ++. .+++||+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDL---RKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCT---TSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChh---hhhchhhccCCccEEEE
Confidence 578999999 988654322 234799999999999876542 234566666 44 553 3568999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcE-EEEEEcC
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGV-FIVSFSN 196 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~-li~~~~~ 196 (282)
+..+++. ....+++++.++|||||+ +++++.+
T Consensus 248 ~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 248 DPPETLE-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CCCCchH-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 8654433 257899999999999994 4777654
No 228
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.90 E-value=2.4e-09 Score=96.26 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHHhCCC---------CCceEEeeccccc
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQ 149 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~ 149 (282)
.....+.... ..++.+|||+|||+|....... ...+|+|+|+|+.|++.++. ...+..+|+ .
T Consensus 205 ~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~---~ 278 (373)
T 3tm4_A 205 SIANAMIELA---ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA---T 278 (373)
T ss_dssp HHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG---G
T ss_pred HHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---h
Confidence 3444444433 5678899999999887543332 23489999999999976542 235677777 6
Q ss_pred CCCCCCCceeEEEecchhhc-------cCCH-HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 150 KLEFDHCSFDAVVCAVSVQY-------LQQP-EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 150 ~l~~~~~s~D~v~~~~~l~~-------~~~~-~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++.++++||+|+++-.... +.+. ..+++++.++| ||.+++.++++
T Consensus 279 ~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~ 332 (373)
T 3tm4_A 279 QLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEK 332 (373)
T ss_dssp GGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH
T ss_pred hCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCH
Confidence 77777789999999743221 1122 56888999988 66666655554
No 229
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.90 E-value=1.4e-09 Score=91.59 Aligned_cols=100 Identities=8% Similarity=-0.065 Sum_probs=68.6
Q ss_pred HHHhhCCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCc
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s 157 (282)
.+...++++.+|||||||+|... +...+..+|+|+|+++.+++.|+.+ ..+..+|. .+...++.+
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~---l~~~~~~~~ 90 (244)
T 3gnl_A 14 KVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG---LAVIEKKDA 90 (244)
T ss_dssp HHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG---GGGCCGGGC
T ss_pred HHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch---hhccCcccc
Confidence 35667888999999999987643 3322456899999999998765532 24455555 333222335
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|++....- .-...++.+..+.|+++|+|+++-
T Consensus 91 ~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 91 IDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp CCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 99988754321 113567889999999999999883
No 230
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.90 E-value=2.1e-09 Score=89.62 Aligned_cols=100 Identities=11% Similarity=-0.006 Sum_probs=68.4
Q ss_pred HHHhhCCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCc
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s 157 (282)
.+...++++.+|||||||+|... +...+..+|+|+|+++.+++.++.+ ..+..+|.. ..++. ...
T Consensus 8 ~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l--~~l~~-~~~ 84 (225)
T 3kr9_A 8 LVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGL--AAFEE-TDQ 84 (225)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGG--GGCCG-GGC
T ss_pred HHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchh--hhccc-CcC
Confidence 34567778899999999988642 3323467899999999998765422 234555542 23332 126
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|+....--. -...++.++...|+|+|+++++-
T Consensus 85 ~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 85 VSVITIAGMGGR--LIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp CCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEE
T ss_pred CCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEEC
Confidence 999887643211 14678999999999999999873
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.89 E-value=6.9e-10 Score=96.20 Aligned_cols=92 Identities=23% Similarity=0.214 Sum_probs=61.0
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..++++ +||+|+++
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~---~~~~~~--~fD~vv~n 100 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV---LKTDLP--FFDTCVAN 100 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT---TTSCCC--CCSEEEEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce---ecccch--hhcEEEEe
Confidence 3467899999999887544332 35799999999999865432 234556666 455553 79999997
Q ss_pred c-----------hhhccCCHHHHH----HHH--HHcccCCcEEE
Q 023470 165 V-----------SVQYLQQPEKVF----AEV--FRVLKPGGVFI 191 (282)
Q Consensus 165 ~-----------~l~~~~~~~~~l----~~~--~r~LkpgG~li 191 (282)
. +++|.++...++ +|+ +++|||||.++
T Consensus 101 lpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 101 LPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 4 344444433211 344 47999999763
No 232
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.89 E-value=1.6e-09 Score=99.23 Aligned_cols=98 Identities=15% Similarity=0.203 Sum_probs=69.5
Q ss_pred CCCCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCC--CCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLE--FDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~--~~~~s~D~v~ 162 (282)
..++.+|||+|||.|.. ++...+..+|+|+|+|+.+++.++. ...+...|. ..++ +++++||+|+
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~---~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHHHHTTCCEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch---hhchhhcccCCCCEEE
Confidence 35788999999998754 3444455899999999987754321 234555565 4443 4557899999
Q ss_pred ec------chhhccCCH----------------HHHHHHHHHcccCCcEEEEEEc
Q 023470 163 CA------VSVQYLQQP----------------EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 163 ~~------~~l~~~~~~----------------~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+. .++++.++. ..+++++.++|||||++++++.
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 62 345555543 4689999999999999998863
No 233
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.88 E-value=1.5e-09 Score=91.53 Aligned_cols=93 Identities=11% Similarity=0.119 Sum_probs=65.9
Q ss_pred CCCeEEEeCCcccch---hhhhcC-CCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCC-C-----CCCc
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVS-YKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLE-F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~-~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~-~-----~~~s 157 (282)
++.+|||||||+|.. ++...+ +.+|+++|+|+.+++.++.+ ..+..+|.. +.++ + ++++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~--~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAM--LALDNLLQGQESEGS 147 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH--HHHHHHHHSTTCTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHHHHHHhccCCCCC
Confidence 567999999998753 344334 78999999999988665421 234555542 1111 1 2578
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|++... ..+...+++++.++|||||.+++..
T Consensus 148 fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999998743 2355789999999999999998863
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.87 E-value=9.2e-10 Score=99.44 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=67.4
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC----------CCceEEeecccc-cCCCCCCCceeEEE
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR----------LEYFIVKDLNQD-QKLEFDHCSFDAVV 162 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~----------~~~~~~~d~~~~-~~l~~~~~s~D~v~ 162 (282)
.++.+|||+|||+|....... +..+|+|+|+|+.|++.++. +..+..+|+... ..+.....+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 578899999999886543322 34589999999999865432 334566665210 01111245899999
Q ss_pred ecchh-----hcc----CCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 163 CAVSV-----QYL----QQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 163 ~~~~l-----~~~----~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+.--. .+. .+..++++++.++|||||.++++....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 85211 223 334457888899999999999987544
No 235
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.86 E-value=3e-09 Score=94.61 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=70.4
Q ss_pred CCCeEEEeCCcccchhhhhc---CC-----CeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCCCCCCceeEE
Q 023470 97 PGSEVLDLMSSWVSHLPQEV---SY-----KRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLEFDHCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~---~~-----~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~~~~~s~D~v 161 (282)
++.+|||+|||+|..+.... +. .+++|+|+++.+++.++. ...+..+|. .. +...++||+|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~---l~-~~~~~~fD~I 205 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDG---LA-NLLVDPVDVV 205 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCT---TS-CCCCCCEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCC---CC-ccccCCccEE
Confidence 56789999999987654332 21 789999999998866543 234555554 22 2345789999
Q ss_pred EecchhhccCCHH------------------HHHHHHHHcccCCcEEEEEEcCc
Q 023470 162 VCAVSVQYLQQPE------------------KVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 162 ~~~~~l~~~~~~~------------------~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++--+.+++..+ .+++++.+.|||||++++.+|+.
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 9997665554322 47999999999999999998865
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.85 E-value=6.3e-09 Score=94.72 Aligned_cols=96 Identities=22% Similarity=0.268 Sum_probs=69.2
Q ss_pred CCCeEEEeCCcccchhhhhc----CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEec--ch-hhc
Q 023470 97 PGSEVLDLMSSWVSHLPQEV----SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCA--VS-VQY 169 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~----~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~--~~-l~~ 169 (282)
++.+|||+|||+|..+.... +..+++|+|+++.+++.+ ....+..+|+ .... .+++||+|+++ +. ...
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-~~~~~~~~D~---~~~~-~~~~fD~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-PWAEGILADF---LLWE-PGEAFDLILGNPPYGIVGE 113 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-TTEEEEESCG---GGCC-CSSCEEEEEECCCCCCBSC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-CCCcEEeCCh---hhcC-ccCCCCEEEECcCccCccc
Confidence 46799999999987654432 568999999999999877 3445667776 3333 24689999996 11 111
Q ss_pred -------cCC-------------------HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 170 -------LQQ-------------------PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 170 -------~~~-------------------~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+.+ ...+++.+.++|||||++++.+|+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 114 ASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp TTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred ccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 211 1246899999999999999998864
No 237
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.85 E-value=1.4e-09 Score=98.68 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=71.7
Q ss_pred HHhhCCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCC-C---CCC
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKL-E---FDH 155 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l-~---~~~ 155 (282)
+.....++.+|||+|||+|....... +..+|+|+|+|+.+++.++. +..+..+|+ .++ + ..+
T Consensus 211 ~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~---~~~~~~~~~~~ 287 (396)
T 2as0_A 211 LEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA---FEEMEKLQKKG 287 (396)
T ss_dssp HGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHHHTT
T ss_pred HHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCH---HHHHHHHHhhC
Confidence 33344478899999999886533322 35699999999999865542 234555555 222 1 125
Q ss_pred CceeEEEecc---------hhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 156 CSFDAVVCAV---------SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 156 ~s~D~v~~~~---------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
++||+|++.- +.++..+...++.++.++|||||.++++..+.
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 6899999952 33344566779999999999999998886554
No 238
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=6.3e-11 Score=100.45 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=65.1
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCC------ceEEeecccccCCCCCC-CceeEEEecc-
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLE------YFIVKDLNQDQKLEFDH-CSFDAVVCAV- 165 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~------~~~~~d~~~~~~l~~~~-~s~D~v~~~~- 165 (282)
+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++.+. .+..+|+ .++++++ ++| .|+++.
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~---~~~~~~~~~~f-~vv~n~P 102 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI---LQFQFPNKQRY-KIVGNIP 102 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC---TTTTCCCSSEE-EEEEECC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECCh---hhcCcccCCCc-EEEEeCC
Confidence 3467899999999886433322 3489999999999998776542 3445555 5666653 688 666651
Q ss_pred ----------hhhccCCHHHHH----HHHHHcccCCcEEEEE
Q 023470 166 ----------SVQYLQQPEKVF----AEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ----------~l~~~~~~~~~l----~~~~r~LkpgG~li~~ 193 (282)
.++|..+....+ +.+.|+|||||.+.+.
T Consensus 103 y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 103 YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 233444445566 7799999999997654
No 239
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.83 E-value=2.5e-08 Score=81.73 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhh-CCCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCC
Q 023470 83 FISTLTNLYRQM-LRPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLE 152 (282)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~ 152 (282)
....+...+... ..++.+|||+|||+|...... .+..+|+|+|+|+.+++.++. ...+..+|+ .+++
T Consensus 34 ~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~ 110 (207)
T 1wy7_A 34 AASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDV---SEFN 110 (207)
T ss_dssp HHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCG---GGCC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECch---HHcC
Confidence 334444333322 346789999999988654332 234589999999999876543 234556665 4443
Q ss_pred CCCCceeEEEecchhhccC--CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 153 FDHCSFDAVVCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++||+|+++..+++.. ....+++++.++| ||.+++.+++
T Consensus 111 ---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~ 151 (207)
T 1wy7_A 111 ---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAK 151 (207)
T ss_dssp ---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECC
T ss_pred ---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEEeCC
Confidence 4899999997766653 3456899999998 5555444333
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.83 E-value=5.1e-09 Score=97.02 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=66.1
Q ss_pred CCCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCC-CCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEF-DHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~-~~~s~D~v~~ 163 (282)
++.+|||+|||.|.. ++... +...|+|+|+|+.+++.++. +..+...|. ..++. .+++||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~---~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDG---RVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCS---TTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCH---HHhhhhccccCCEEEE
Confidence 788999999997753 44443 35799999999998865432 223344444 44432 3578999998
Q ss_pred c------chhhccCC----------------HHHHHHHHHHcccCCcEEEEEEc
Q 023470 164 A------VSVQYLQQ----------------PEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 164 ~------~~l~~~~~----------------~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
. .++.+.++ ...+++++.++|||||++++++.
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 2 23333332 23589999999999999998754
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=1.4e-09 Score=105.29 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=71.0
Q ss_pred CCCCeEEEeCCcccchhhhh--cCCCeEEEEcCCHHHHHhCCC----------CCceEEeecccccCCCCCCCceeEEEe
Q 023470 96 RPGSEVLDLMSSWVSHLPQE--VSYKRVVGHGLNAQELAKNPR----------LEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~--~~~~~v~giD~s~~~l~~~~~----------~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
.++.+|||+|||+|...... .+..+|+++|+|+.+++.++. ...+..+|+. .-++...++||+|++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~--~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL--AWLREANEQFDLIFI 615 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHH--HHHHHCCCCEEEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHH--HHHHhcCCCccEEEE
Confidence 36889999999988643322 244579999999999865542 2345566652 113334578999998
Q ss_pred cc-----------hhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 164 AV-----------SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 164 ~~-----------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.- ++++..+...++.++.++|||||.++++...
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 52 3344456677999999999999999998764
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.81 E-value=1.5e-09 Score=99.97 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=67.1
Q ss_pred CCCCCeEEEeCCcccch---hhhhcC-CCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCC-CCCCceeEEE
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEVS-YKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLE-FDHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~~-~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~-~~~~s~D~v~ 162 (282)
..++.+|||+|||.|.. ++...+ ...|+|+|+|+.+++.++.+ ..+...|. ..++ ..+++||+|+
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da---~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPP---RALAEAFGTYFHRVL 175 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCH---HHHHHHHCSCEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCH---HHhhhhccccCCEEE
Confidence 45788999999998753 444433 47999999999998655432 23334443 3333 2357899999
Q ss_pred ec------chhhccCCH----------------HHHHHHHHHcccCCcEEEEEEc
Q 023470 163 CA------VSVQYLQQP----------------EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 163 ~~------~~l~~~~~~----------------~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+. .++.+-++. ..+++++.++|||||+|++++.
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 52 233333332 5689999999999999998753
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.78 E-value=1.1e-09 Score=98.77 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=68.3
Q ss_pred CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCC-C---CCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKL-E---FDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l-~---~~~~s~D~v~~ 163 (282)
++.+|||+|||+|....... ...+|+|+|+|+.+++.++.+ ..+..+|. .++ + ..+++||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~---~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCH---HHHHHHHHhcCCCeeEEEE
Confidence 67899999999876432221 267999999999998665422 34556665 222 1 12568999999
Q ss_pred cc---------hhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 164 AV---------SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 164 ~~---------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.- +..+..+...++.++.++|||||.++++....
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 52 22333455679999999999999999986543
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.75 E-value=1.3e-08 Score=90.31 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=68.7
Q ss_pred HHHhhCCCCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeE
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDA 160 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~ 160 (282)
.+...+.++.+|||+|||+|.......+..+|+|+|+|+.+++.++. ...+..+|. ..+. ++||+
T Consensus 188 ~i~~~~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~---~~~~---~~fD~ 261 (336)
T 2yx1_A 188 RIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV---REVD---VKGNR 261 (336)
T ss_dssp HHHHHCCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG---GGCC---CCEEE
T ss_pred HHHHhcCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh---HHhc---CCCcE
Confidence 34455668899999999988654333367899999999998865432 234556665 3333 78999
Q ss_pred EEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 161 VVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 161 v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
|++.--- ....++.++.++|+|||.+++...
T Consensus 262 Vi~dpP~----~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 262 VIMNLPK----FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp EEECCTT----TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCcH----hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9996311 123789999999999999887643
No 245
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.75 E-value=7e-09 Score=93.99 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=69.2
Q ss_pred CCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCC----------CCceEEeecccc-cCCCCCCCceeEEE
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPR----------LEYFIVKDLNQD-QKLEFDHCSFDAVV 162 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~----------~~~~~~~d~~~~-~~l~~~~~s~D~v~ 162 (282)
.++.+|||+|||+|....... +..+|+|+|+|+.+++.++. +..+..+|+... ..+...+++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 477899999999886533322 35699999999999865432 234555555210 01111246899999
Q ss_pred ecc---------hhhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 163 CAV---------SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 163 ~~~---------~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+.- ..++..+...++.++.++|||||.++++....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 972 23333566789999999999999999886543
No 246
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.72 E-value=1.4e-08 Score=87.43 Aligned_cols=97 Identities=8% Similarity=0.049 Sum_probs=67.9
Q ss_pred HHHHhhCCCCCeEEEeCCcccchhh--hhcCCCeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCc
Q 023470 89 NLYRQMLRPGSEVLDLMSSWVSHLP--QEVSYKRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 89 ~~~~~~~~~~~~vLDiGcG~~~~~~--~~~~~~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s 157 (282)
..+.+.++++.+|||+|||+|.+.. ...+..+|+|+|+|+.+++.++.+ ..+..+|. ..+. ..+.
T Consensus 117 ~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~---~~~~-~~~~ 192 (278)
T 3k6r_A 117 VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---RDFP-GENI 192 (278)
T ss_dssp HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---TTCC-CCSC
T ss_pred HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH---HHhc-cccC
Confidence 4556677899999999999886432 223567999999999987654321 23344444 4444 3578
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
||.|++..- +....++..+.++|||||.+.+.
T Consensus 193 ~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 193 ADRILMGYV----VRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEE
Confidence 999998632 23456788899999999998654
No 247
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.67 E-value=7.5e-08 Score=86.16 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=65.9
Q ss_pred CCeEEEeCCcccchh-----------hhh-------cCCCeEEEEcCCHHHH-------HhCCC----------C--Cce
Q 023470 98 GSEVLDLMSSWVSHL-----------PQE-------VSYKRVVGHGLNAQEL-------AKNPR----------L--EYF 140 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~-----------~~~-------~~~~~v~giD~s~~~l-------~~~~~----------~--~~~ 140 (282)
..+|+|+|||+|.-. ... .+..+|+.-|+..... ...++ . ..+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999865311 111 1457888888876442 22111 0 112
Q ss_pred EEeecccc-cCCCCCCCceeEEEecchhhccC--------------------------------------CHHHHHHHHH
Q 023470 141 IVKDLNQD-QKLEFDHCSFDAVVCAVSVQYLQ--------------------------------------QPEKVFAEVF 181 (282)
Q Consensus 141 ~~~d~~~~-~~l~~~~~s~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~ 181 (282)
.+..+... ..-.++++++|+|+|+.+|||+. |...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 23457899999999999999997 3334688999
Q ss_pred HcccCCcEEEEEEcCc
Q 023470 182 RVLKPGGVFIVSFSNR 197 (282)
Q Consensus 182 r~LkpgG~li~~~~~~ 197 (282)
+.|+|||++++++..+
T Consensus 213 ~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHEEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEecC
Confidence 9999999999998754
No 248
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.64 E-value=1.3e-08 Score=93.61 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCCCeEEEeCCcccc---hhhhhc-CCCeEEEEcCCHHHHHhCCCC--------CceEEeecccccCCC-CCCCceeEE
Q 023470 95 LRPGSEVLDLMSSWVS---HLPQEV-SYKRVVGHGLNAQELAKNPRL--------EYFIVKDLNQDQKLE-FDHCSFDAV 161 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~---~~~~~~-~~~~v~giD~s~~~l~~~~~~--------~~~~~~d~~~~~~l~-~~~~s~D~v 161 (282)
..++.+|||+|||.|. .++... ....|+|+|+|+.+++.++.+ ..+...|. ..++ ..+++||+|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da---~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP---AELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH---HHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH---HHhhhhccccCCEE
Confidence 4578899999998775 344433 357999999999988654322 22333343 3332 235789999
Q ss_pred Eec------chhhccCC----------------HHHHHHHHHHcccCCcEEEEEEc
Q 023470 162 VCA------VSVQYLQQ----------------PEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 162 ~~~------~~l~~~~~----------------~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
++. .++.+-++ ...+++++.++|||||+|+.++.
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 974 12222111 12589999999999999998754
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.62 E-value=2.3e-08 Score=92.00 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=68.0
Q ss_pred CCCeEEEeCCcccchhhhhc----------------CCCeEEEEcCCHHHHHhCC------C----CCceEEeecccccC
Q 023470 97 PGSEVLDLMSSWVSHLPQEV----------------SYKRVVGHGLNAQELAKNP------R----LEYFIVKDLNQDQK 150 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~----------------~~~~v~giD~s~~~l~~~~------~----~~~~~~~d~~~~~~ 150 (282)
++.+|||.|||+|..+.... ...+++|+|+++.+++.++ + ...+..+|. ..
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~---l~ 247 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDS---LE 247 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCT---TT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCC---CC
Confidence 46789999999987654322 2368999999998876543 1 234556665 33
Q ss_pred CCCCCCceeEEEecchhhccCC-----------------HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 151 LEFDHCSFDAVVCAVSVQYLQQ-----------------PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 151 l~~~~~s~D~v~~~~~l~~~~~-----------------~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+. ..+||+|+++--+.+... ...+++++.+.|||||++++.+|+.
T Consensus 248 ~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 248 KEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp SCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred Ccc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 333 248999999944333211 1368999999999999999988764
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.62 E-value=8.6e-08 Score=87.54 Aligned_cols=100 Identities=20% Similarity=0.148 Sum_probs=65.8
Q ss_pred HHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCC-------CceEEeecccccCCCCCCCc
Q 023470 86 TLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRL-------EYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 86 ~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~-------~~~~~~d~~~~~~l~~~~~s 157 (282)
.+...+.. +.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++.+ ..+..+|+ .++. + .+
T Consensus 280 ~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~---~~~~-~-~~ 353 (425)
T 2jjq_A 280 NLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASD---REVS-V-KG 353 (425)
T ss_dssp HHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCT---TTCC-C-TT
T ss_pred HHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh---HHcC-c-cC
Confidence 33333333 5678899999999886543322 467999999999999766532 34566666 4443 2 28
Q ss_pred eeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|++.---.. -.+.+++.+. .|+|||.++++.
T Consensus 354 fD~Vv~dPPr~g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 354 FDTVIVDPPRAG--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CSEEEECCCTTC--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred CCEEEEcCCccc--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 999999643111 1134555554 599999999985
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.60 E-value=1.3e-07 Score=82.33 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLE 152 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~ 152 (282)
...+.+.+.+ .+.++.+|||+|||+|....... .+.+|+|+|+|+.|++.++. +..+..+|+ ..++
T Consensus 29 ~i~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~---~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAA--KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA---IKTV 103 (299)
T ss_dssp HHHHHHHHHH--CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----C---CSSC
T ss_pred HHHHHHHHhc--CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECch---hhCC
Confidence 4444444433 24567899999999887554433 46799999999999865432 234556665 4555
Q ss_pred CCCCceeEEEecchhhccCCH-HHHH---------------HHHHHcccCCc
Q 023470 153 FDHCSFDAVVCAVSVQYLQQP-EKVF---------------AEVFRVLKPGG 188 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~-~~~l---------------~~~~r~LkpgG 188 (282)
+ .+||+|+++...+..... ..++ +.+.|+++++|
T Consensus 104 ~--~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 104 F--PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp C--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred c--ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 4 479999997554433211 1233 44778898888
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.59 E-value=4.8e-09 Score=88.83 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=57.8
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCCC-CceeEEEecc--
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFDH-CSFDAVVCAV-- 165 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~~-~s~D~v~~~~-- 165 (282)
.++.+|||||||+|....... .+.+|+|+|+|+.|++.++. ...+..+|+ ..+++++ ..| .|+++.
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~---~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDI---LQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCG---GGCCCCSSCCC-EEEEECCG
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChH---HhCCcccCCCe-EEEEeCCc
Confidence 467899999999987543332 35899999999999865432 235566666 5666653 456 455542
Q ss_pred ---------hhhccCCHHHHH----HHHHHcccCCcEE
Q 023470 166 ---------SVQYLQQPEKVF----AEVFRVLKPGGVF 190 (282)
Q Consensus 166 ---------~l~~~~~~~~~l----~~~~r~LkpgG~l 190 (282)
.++|......++ +.+.|+|+|+|.+
T Consensus 105 ~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 105 NISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp GGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred ccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 223333333334 4478888888865
No 253
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.53 E-value=2e-07 Score=79.14 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=68.9
Q ss_pred HHHHHHHHHh-hCCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCCCC----ce--EEeecccccCCCC
Q 023470 84 ISTLTNLYRQ-MLRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPRLE----YF--IVKDLNQDQKLEF 153 (282)
Q Consensus 84 ~~~~~~~~~~-~~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~~~----~~--~~~d~~~~~~l~~ 153 (282)
...|.++..+ .+.++.+|||+|||.|... +...+...+.|+|++.++........ ++ ...++ +...+
T Consensus 60 A~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~---dv~~l 136 (277)
T 3evf_A 60 TAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT---DIHRL 136 (277)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC---CTTTS
T ss_pred HHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccc---eehhc
Confidence 3355555554 3567789999999766433 33234567889998855421111110 22 22232 33456
Q ss_pred CCCceeEEEecchhhccCC----H-H--HHHHHHHHcccCC-cEEEEEEcC
Q 023470 154 DHCSFDAVVCAVSVQYLQQ----P-E--KVFAEVFRVLKPG-GVFIVSFSN 196 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~----~-~--~~l~~~~r~Lkpg-G~li~~~~~ 196 (282)
+++.||+|+|..+.+ ... . . .+++.+.++|||| |.|++.+-.
T Consensus 137 ~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 678999999998666 322 1 1 2578889999999 999999876
No 254
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.48 E-value=1.8e-07 Score=83.84 Aligned_cols=101 Identities=12% Similarity=0.064 Sum_probs=64.7
Q ss_pred CCeEEEeCCcccchh---hhh-----------------cCCCeEEEEcCC-----------HHHHH---hCCC--CCceE
Q 023470 98 GSEVLDLMSSWVSHL---PQE-----------------VSYKRVVGHGLN-----------AQELA---KNPR--LEYFI 141 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~---~~~-----------------~~~~~v~giD~s-----------~~~l~---~~~~--~~~~~ 141 (282)
..+|+|+||+.|.-. ... .+..+|+..|+. +.+.+ ...+ ...+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999765311 000 134678888887 33221 1111 12233
Q ss_pred Eeecccc-cCCCCCCCceeEEEecchhhccCCHHH---------------------------------------HHHHHH
Q 023470 142 VKDLNQD-QKLEFDHCSFDAVVCAVSVQYLQQPEK---------------------------------------VFAEVF 181 (282)
Q Consensus 142 ~~d~~~~-~~l~~~~~s~D~v~~~~~l~~~~~~~~---------------------------------------~l~~~~ 181 (282)
+..+... ....++++++|+|+|+.+|||+.+.+. +|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 345678999999999999999865431 256668
Q ss_pred HcccCCcEEEEEEcCch
Q 023470 182 RVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 182 r~LkpgG~li~~~~~~~ 198 (282)
+.|+|||++++++..+.
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 213 EELISRGRMLLTFICKE 229 (384)
T ss_dssp HHEEEEEEEEEEEECCC
T ss_pred HHhccCCeEEEEEecCC
Confidence 99999999999987653
No 255
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.47 E-value=6.1e-07 Score=82.16 Aligned_cols=95 Identities=22% Similarity=0.260 Sum_probs=62.9
Q ss_pred CCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccc-cCCCCCCCceeEEEecc
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQD-QKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~-~~l~~~~~s~D~v~~~~ 165 (282)
.++.+|||+|||+|....... ...+|+|+|+|+.+++.++. +..+..+|+... ..+++.+++||+|++.-
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 467899999999886543322 36799999999999876542 245667776321 12445667899999852
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
--.. ...+++.+.+ ++|++.++++.
T Consensus 365 Pr~g---~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 365 ARAG---AAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CTTC---CHHHHHHHHH-HCCSEEEEEES
T ss_pred CCcc---HHHHHHHHHh-cCCCeEEEEEC
Confidence 2111 1245555543 78999888874
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.42 E-value=1.2e-06 Score=76.47 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=60.5
Q ss_pred CCCCCeEEEeCCcccch---hhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccccCCCCCC---Ccee
Q 023470 95 LRPGSEVLDLMSSWVSH---LPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQDQKLEFDH---CSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~~~l~~~~---~s~D 159 (282)
..++.+|||+|||.|.. ++... +..+|+|+|+++.+++.++. +..+...|. ..++... ++||
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~---~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDF---LAVSPSDPRYHEVH 176 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG---GGSCTTCGGGTTEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCh---HhcCccccccCCCC
Confidence 45788999999987753 33333 45799999999998764331 234555555 3443221 5799
Q ss_pred EEEec------chhhccC-----------CH-------HHHHHHHHHcccCCcEEEEEEc
Q 023470 160 AVVCA------VSVQYLQ-----------QP-------EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 160 ~v~~~------~~l~~~~-----------~~-------~~~l~~~~r~LkpgG~li~~~~ 195 (282)
.|++. .++..-+ +. .++|+.+.++|+ ||+++.++-
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 99973 2222211 21 236888888887 999887753
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.37 E-value=7e-07 Score=77.46 Aligned_cols=81 Identities=15% Similarity=0.100 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC------CCceEEeecccccCCCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR------LEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~------~~~~~~~d~~~~~~l~~~ 154 (282)
...+.+.+.+ .+.++.+|||||||+|....... .+.+|+|+|++++|++.++. +..+..+|+ ..++++
T Consensus 37 ~i~~~Iv~~l--~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~---l~~~~~ 111 (295)
T 3gru_A 37 NFVNKAVESA--NLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDA---LKVDLN 111 (295)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCT---TTSCGG
T ss_pred HHHHHHHHhc--CCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECch---hhCCcc
Confidence 4444444332 24567899999999886543322 36799999999999876542 345677777 667777
Q ss_pred CCceeEEEecchh
Q 023470 155 HCSFDAVVCAVSV 167 (282)
Q Consensus 155 ~~s~D~v~~~~~l 167 (282)
+.+||+|+++...
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 7789999988543
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.36 E-value=4.1e-07 Score=81.98 Aligned_cols=79 Identities=10% Similarity=0.138 Sum_probs=54.6
Q ss_pred CeEEEEcCCHHHHHhCCCC---------CceEEeecccccCCCCCCCceeEEEec--ch--hhccCCHHHHHHHHHHccc
Q 023470 119 KRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKLEFDHCSFDAVVCA--VS--VQYLQQPEKVFAEVFRVLK 185 (282)
Q Consensus 119 ~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l~~~~~s~D~v~~~--~~--l~~~~~~~~~l~~~~r~Lk 185 (282)
.+|+|+|+++.|++.++.+ ..+...|+ .+++.+ .+||+|+++ +. +....+...+.+++.++||
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~---~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDA---TQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCG---GGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 5799999999999766532 34666776 555543 589999997 22 1112344557777777887
Q ss_pred C--CcEEEEEEcCchhHH
Q 023470 186 P--GGVFIVSFSNRMFYE 201 (282)
Q Consensus 186 p--gG~li~~~~~~~~~~ 201 (282)
+ ||.+++.+++..+..
T Consensus 334 ~~~g~~~~iit~~~~l~~ 351 (385)
T 3ldu_A 334 KLKNWSYYLITSYEDFEY 351 (385)
T ss_dssp TSBSCEEEEEESCTTHHH
T ss_pred hCCCCEEEEEECCHHHHH
Confidence 7 999888888765543
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.35 E-value=2.2e-07 Score=82.44 Aligned_cols=99 Identities=17% Similarity=0.165 Sum_probs=63.1
Q ss_pred CCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC----------------CceEEeecccccCCC-C--CC
Q 023470 97 PGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL----------------EYFIVKDLNQDQKLE-F--DH 155 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~----------------~~~~~~d~~~~~~l~-~--~~ 155 (282)
.+.+||+||||.|....... +..+|+++|+++++++.+++. ..+.++|.. .-+. . .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~--~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI--PVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHH--HHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHH--HHHHhhhccC
Confidence 46799999999876544322 347999999999999766432 123333331 1111 1 25
Q ss_pred CceeEEEecchh-hcc--C---CHHHHHHHH----HHcccCCcEEEEEEcCc
Q 023470 156 CSFDAVVCAVSV-QYL--Q---QPEKVFAEV----FRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 156 ~s~D~v~~~~~l-~~~--~---~~~~~l~~~----~r~LkpgG~li~~~~~~ 197 (282)
++||+|++...- ..- + --.++++.+ .++|+|||.+++.....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 789999997532 111 1 124566666 89999999999875443
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.34 E-value=9.9e-07 Score=79.67 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=53.9
Q ss_pred CeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec--chhhcc--CCHHHHHHHHHHccc
Q 023470 119 KRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA--VSVQYL--QQPEKVFAEVFRVLK 185 (282)
Q Consensus 119 ~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~--~~l~~~--~~~~~~l~~~~r~Lk 185 (282)
.+|+|+|+|+.|++.++. ...+...|+ .+++.+ .+||+|+++ +....- .+...+.+++.++||
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~---~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQV---ADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCG---GGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---HhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 469999999999976542 245677777 556554 589999999 543211 234456666777776
Q ss_pred C--CcEEEEEEcCchhH
Q 023470 186 P--GGVFIVSFSNRMFY 200 (282)
Q Consensus 186 p--gG~li~~~~~~~~~ 200 (282)
+ ||.+++.+++..+.
T Consensus 340 ~~~g~~~~iit~~~~l~ 356 (393)
T 3k0b_A 340 RMPTWSVYVLTSYELFE 356 (393)
T ss_dssp TCTTCEEEEEECCTTHH
T ss_pred cCCCCEEEEEECCHHHH
Confidence 6 99998888876543
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.33 E-value=9e-07 Score=79.32 Aligned_cols=110 Identities=10% Similarity=0.074 Sum_probs=67.3
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC--------CCceEEeecccc-cCCCC
Q 023470 85 STLTNLYRQMLR-PGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR--------LEYFIVKDLNQD-QKLEF 153 (282)
Q Consensus 85 ~~~~~~~~~~~~-~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~--------~~~~~~~d~~~~-~~l~~ 153 (282)
..+...+.+.+. .+.+|||+|||+|....... ...+|+|+|+|+.+++.++. +..+..+|.... ..+.-
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~ 279 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG 279 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSS
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhh
Confidence 344444444443 35789999999886543322 45799999999999875542 234555554210 00110
Q ss_pred ------------CCCceeEEEecchhhccCCHHH--HHHHHHHcccCCcEEEEEEcCchhHHH
Q 023470 154 ------------DHCSFDAVVCAVSVQYLQQPEK--VFAEVFRVLKPGGVFIVSFSNRMFYEK 202 (282)
Q Consensus 154 ------------~~~s~D~v~~~~~l~~~~~~~~--~l~~~~r~LkpgG~li~~~~~~~~~~~ 202 (282)
.+.+||+|++. |+. +..++.+.|+++|.++....++.....
T Consensus 280 ~~~~~~l~~~~~~~~~fD~Vv~d--------PPr~g~~~~~~~~l~~~g~ivyvsc~p~t~ar 334 (369)
T 3bt7_A 280 VREFNRLQGIDLKSYQCETIFVD--------PPRSGLDSETEKMVQAYPRILYISCNPETLCK 334 (369)
T ss_dssp CCCCTTGGGSCGGGCCEEEEEEC--------CCTTCCCHHHHHHHTTSSEEEEEESCHHHHHH
T ss_pred ccccccccccccccCCCCEEEEC--------cCccccHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 11379999874 222 356778888899998877666544443
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.32 E-value=3.4e-07 Score=81.39 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=65.7
Q ss_pred CCCeEEEeCCcccch----hhh---------------hcCCCeEEEEcCCHHHHHh---C-C-----CCCceEEeecccc
Q 023470 97 PGSEVLDLMSSWVSH----LPQ---------------EVSYKRVVGHGLNAQELAK---N-P-----RLEYFIVKDLNQD 148 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~----~~~---------------~~~~~~v~giD~s~~~l~~---~-~-----~~~~~~~~d~~~~ 148 (282)
...+|+|+||+.|.- +.. ..+..+|+..|+...+... . . ....|..+ +...
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~g-vpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFING-VPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEE-EESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEe-cchh
Confidence 346799999964421 111 1245688889988654421 1 0 11123333 3221
Q ss_pred -cCCCCCCCceeEEEecchhhccCCHH---------------------------------HHHHHHHHcccCCcEEEEEE
Q 023470 149 -QKLEFDHCSFDAVVCAVSVQYLQQPE---------------------------------KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 149 -~~l~~~~~s~D~v~~~~~l~~~~~~~---------------------------------~~l~~~~r~LkpgG~li~~~ 194 (282)
....++++++|+|+|+.+|||+.+.+ .+|+..++.|+|||++++++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 34568899999999999999986422 24888999999999999997
Q ss_pred cCc
Q 023470 195 SNR 197 (282)
Q Consensus 195 ~~~ 197 (282)
..+
T Consensus 210 ~gr 212 (359)
T 1m6e_X 210 LGR 212 (359)
T ss_dssp EEC
T ss_pred ecC
Confidence 654
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.31 E-value=1.5e-06 Score=78.14 Aligned_cols=78 Identities=9% Similarity=0.123 Sum_probs=55.1
Q ss_pred CeEEEEcCCHHHHHhCCC---------CCceEEeecccccCCCCCCCceeEEEec--chhhcc--CCHHHHHHHHHHccc
Q 023470 119 KRVVGHGLNAQELAKNPR---------LEYFIVKDLNQDQKLEFDHCSFDAVVCA--VSVQYL--QQPEKVFAEVFRVLK 185 (282)
Q Consensus 119 ~~v~giD~s~~~l~~~~~---------~~~~~~~d~~~~~~l~~~~~s~D~v~~~--~~l~~~--~~~~~~l~~~~r~Lk 185 (282)
.+|+|+|+|+.|++.++. ...+...|+ .+++.+ .+||+|+++ +....- .+...+.+++.+.||
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~---~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRL---QDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCG---GGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---HHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 469999999999976542 235667777 556554 489999998 543321 234557777777887
Q ss_pred C--CcEEEEEEcCchhH
Q 023470 186 P--GGVFIVSFSNRMFY 200 (282)
Q Consensus 186 p--gG~li~~~~~~~~~ 200 (282)
+ ||.+++.+++..+.
T Consensus 333 ~~~g~~~~iit~~~~l~ 349 (384)
T 3ldg_A 333 PLKTWSQFILTNDTDFE 349 (384)
T ss_dssp TCTTSEEEEEESCTTHH
T ss_pred hCCCcEEEEEECCHHHH
Confidence 6 99999888876554
No 264
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.27 E-value=1.8e-06 Score=73.45 Aligned_cols=112 Identities=15% Similarity=0.106 Sum_probs=70.0
Q ss_pred HHHHHHHHHHh-hCCCCCeEEEeCCcccc---hhhhhcCCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCCC
Q 023470 83 FISTLTNLYRQ-MLRPGSEVLDLMSSWVS---HLPQEVSYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 83 ~~~~~~~~~~~-~~~~~~~vLDiGcG~~~---~~~~~~~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~~ 154 (282)
-...|.++..+ .+.++.+|||+|||.|. +.+...+...|+|+|++..+...+.. ..++....... ....++
T Consensus 75 AAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~-dv~~l~ 153 (282)
T 3gcz_A 75 GSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKT-DVFNME 153 (282)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-CGGGSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCc-chhhcC
Confidence 33455555554 35678899999996554 34444466689999998765333321 11222111110 222355
Q ss_pred CCceeEEEecchhhccCCH-----H--HHHHHHHHcccCC--cEEEEEEcC
Q 023470 155 HCSFDAVVCAVSVQYLQQP-----E--KVFAEVFRVLKPG--GVFIVSFSN 196 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~-----~--~~l~~~~r~Lkpg--G~li~~~~~ 196 (282)
.+.+|+|+|-.+.+ .... . .+|+-+.++|||| |.|++.+-.
T Consensus 154 ~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 68899999998766 3321 1 2577778999999 999998876
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.21 E-value=4.5e-07 Score=85.24 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=65.7
Q ss_pred CCCeEEEeCCcccchhhhhc----C-----------------CCeEEEEcCCHHHHHhCC------CC-------CceEE
Q 023470 97 PGSEVLDLMSSWVSHLPQEV----S-----------------YKRVVGHGLNAQELAKNP------RL-------EYFIV 142 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~----~-----------------~~~v~giD~s~~~l~~~~------~~-------~~~~~ 142 (282)
++.+|||.|||+|..+.... . ..+++|+|+++.+++.|+ +. ..+..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 46789999999987653322 1 247999999998876543 11 23455
Q ss_pred eecccccCCC-CCCCceeEEEec--chhhcc-----------CC-HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 143 KDLNQDQKLE-FDHCSFDAVVCA--VSVQYL-----------QQ-PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 143 ~d~~~~~~l~-~~~~s~D~v~~~--~~l~~~-----------~~-~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+|. ...+ ....+||+|+++ +..... .+ ...++..+.+.|||||++.+.+|+.
T Consensus 249 gDt---L~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 249 GNT---LGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SCT---TSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCC---cccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 554 2211 234689999998 322211 11 2358999999999999999998865
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.21 E-value=2.1e-06 Score=72.90 Aligned_cols=77 Identities=6% Similarity=0.012 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCC------CCCceEEeecccccCCCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNP------RLEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~------~~~~~~~~d~~~~~~l~~~ 154 (282)
...+.+.+.+ .+.++.+|||||||+|....... .+.+|+|+|++++|++.++ .+..+..+|+ ..++++
T Consensus 16 ~i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~---~~~~~~ 90 (255)
T 3tqs_A 16 FVLQKIVSAI--HPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA---LQFDFS 90 (255)
T ss_dssp HHHHHHHHHH--CCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT---TTCCGG
T ss_pred HHHHHHHHhc--CCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch---HhCCHH
Confidence 4444444443 24567899999999987544433 4579999999999986543 2345667777 555543
Q ss_pred ----CCceeEEEec
Q 023470 155 ----HCSFDAVVCA 164 (282)
Q Consensus 155 ----~~s~D~v~~~ 164 (282)
+++|| |+++
T Consensus 91 ~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 91 SVKTDKPLR-VVGN 103 (255)
T ss_dssp GSCCSSCEE-EEEE
T ss_pred HhccCCCeE-EEec
Confidence 35688 6665
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.14 E-value=1.3e-05 Score=75.26 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHhhC--CCCCeEEEeCCcccchhhhhc------CCCeEEEEcCCHHHHHhCC------CC----CceEEe
Q 023470 82 GFISTLTNLYRQML--RPGSEVLDLMSSWVSHLPQEV------SYKRVVGHGLNAQELAKNP------RL----EYFIVK 143 (282)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~vLDiGcG~~~~~~~~~------~~~~v~giD~s~~~l~~~~------~~----~~~~~~ 143 (282)
...+.+.+++.... .++.+|||.+||+|..+.... ...+++|+|+++.++..++ +. ..+..+
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~g 283 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEec
Confidence 34444555544322 256799999999987665432 3579999999998776553 11 134455
Q ss_pred ecccccCCC-CCCCceeEEEec--chhhc-----------------cC---C-HHHHHHHHHHccc-CCcEEEEEEcCch
Q 023470 144 DLNQDQKLE-FDHCSFDAVVCA--VSVQY-----------------LQ---Q-PEKVFAEVFRVLK-PGGVFIVSFSNRM 198 (282)
Q Consensus 144 d~~~~~~l~-~~~~s~D~v~~~--~~l~~-----------------~~---~-~~~~l~~~~r~Lk-pgG~li~~~~~~~ 198 (282)
|... .++| .....||+|+++ +...+ ++ + .-.++..+.+.|| |||++.+.+|+..
T Consensus 284 DtL~-~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 284 DTLD-EDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp CTTT-SCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred ceec-ccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 5421 1112 346789999998 32211 10 1 1238999999999 9999999998763
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.10 E-value=3.1e-06 Score=72.54 Aligned_cols=80 Identities=6% Similarity=-0.007 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC-----CCceEEeecccccCCCCC
Q 023470 81 GGFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR-----LEYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-----~~~~~~~d~~~~~~l~~~ 154 (282)
....+.+.+.+ .+.++ +|||||||+|....... .+.+|+|+|++++|++.++. +..+..+|+ ..++++
T Consensus 33 ~~i~~~Iv~~~--~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~---l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAA--RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA---LLYPWE 106 (271)
T ss_dssp HHHHHHHHHHH--CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCG---GGSCGG
T ss_pred HHHHHHHHHhc--CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECCh---hhCChh
Confidence 34555554443 24567 99999999987543332 45799999999999865432 335667777 556554
Q ss_pred CC-ceeEEEecch
Q 023470 155 HC-SFDAVVCAVS 166 (282)
Q Consensus 155 ~~-s~D~v~~~~~ 166 (282)
+. .+|.|+++.-
T Consensus 107 ~~~~~~~iv~NlP 119 (271)
T 3fut_A 107 EVPQGSLLVANLP 119 (271)
T ss_dssp GSCTTEEEEEEEC
T ss_pred hccCccEEEecCc
Confidence 32 5889888753
No 269
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.07 E-value=9.4e-06 Score=78.50 Aligned_cols=101 Identities=11% Similarity=0.044 Sum_probs=65.2
Q ss_pred CCCCeEEEeCCcccchhhhhc---C---CCeEEEEcCCHHHHHhC--C----C------CC--ceEEeecccccCC-CCC
Q 023470 96 RPGSEVLDLMSSWVSHLPQEV---S---YKRVVGHGLNAQELAKN--P----R------LE--YFIVKDLNQDQKL-EFD 154 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~~~~~---~---~~~v~giD~s~~~l~~~--~----~------~~--~~~~~d~~~~~~l-~~~ 154 (282)
.++.+|||.|||+|..+.... + ..+++|+|+++.+++.+ + . .. .+...++ ... ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~---L~~~~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV---CSLNPED 396 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG---GGCCGGG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch---hcccccc
Confidence 457899999999987654422 2 35799999999887655 1 1 11 1111222 111 223
Q ss_pred CCceeEEEec--chhhccC--------------------------C-HHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 155 HCSFDAVVCA--VSVQYLQ--------------------------Q-PEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 155 ~~s~D~v~~~--~~l~~~~--------------------------~-~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
...||+|+++ ++..... + ...++..+.+.|||||++.+.+|+..+
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 5689999998 3221100 1 233788899999999999999997644
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.02 E-value=4.4e-06 Score=75.00 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=61.7
Q ss_pred CCCeEEEeCCcccch---hhhhcCCCeEEEEcCCHHHHHhCCCC-----------------------CceEEeecccccC
Q 023470 97 PGSEVLDLMSSWVSH---LPQEVSYKRVVGHGLNAQELAKNPRL-----------------------EYFIVKDLNQDQK 150 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~-----------------------~~~~~~d~~~~~~ 150 (282)
++.+|||+|||+|.. ++...+..+|+++|+++++++.++.+ ..+...|... -
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~--~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR--L 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH--H
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHH--H
Confidence 678999999998754 33333567899999999987544321 1233333311 1
Q ss_pred CCCCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 151 LEFDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 151 l~~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+....++||+|++.- . .....++..+.+.|||||.++++..
T Consensus 125 ~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 125 MAERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HHHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEee
Confidence 111135799999642 1 1346789999999999999888753
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.01 E-value=1.8e-05 Score=64.58 Aligned_cols=92 Identities=9% Similarity=-0.047 Sum_probs=59.8
Q ss_pred CCCeEEEeCCcccchhhhhcCCCeEEEEcCCHHHHHhCC------C-----CCceEEeecccc------------cCCC-
Q 023470 97 PGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQELAKNP------R-----LEYFIVKDLNQD------------QKLE- 152 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~~l~~~~------~-----~~~~~~~d~~~~------------~~l~- 152 (282)
+..+|||+|||..........+.+|+.+|.+++..+.++ + +..+..++.... ..++
T Consensus 30 ~a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~ 109 (202)
T 3cvo_A 30 EAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPD 109 (202)
T ss_dssp HCSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTH
T ss_pred CCCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHH
Confidence 567899999995443333334789999999998765432 1 234555554211 0011
Q ss_pred -------C-CCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 153 -------F-DHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 153 -------~-~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. ..++||+|+.-.- .....+..+.+.|+|||.+++.
T Consensus 110 ~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 110 YPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp HHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred HhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEe
Confidence 1 2378999998753 2246677788999999999764
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.00 E-value=2.8e-06 Score=72.02 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhcCCCe--EEEEcCCHHHHHhCCCC------CceEEeecccccCCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEVSYKR--VVGHGLNAQELAKNPRL------EYFIVKDLNQDQKLEF 153 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~~~~~--v~giD~s~~~l~~~~~~------~~~~~~d~~~~~~l~~ 153 (282)
.+...+.+.+ .+.++.+|||||||+|.... ...+.+ |+|+|++++|++.++.. ..+..+|+ ..+++
T Consensus 8 ~i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~---~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAI--NPQKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA---MTFNF 81 (252)
T ss_dssp HHHHHHHHHH--CCCTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG---GGCCH
T ss_pred HHHHHHHHhc--CCCCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECch---hhCCH
Confidence 3444444433 24567899999999886554 333456 99999999999765543 24555665 45544
Q ss_pred CC-----CceeEEEecc
Q 023470 154 DH-----CSFDAVVCAV 165 (282)
Q Consensus 154 ~~-----~s~D~v~~~~ 165 (282)
++ +..|.|+++.
T Consensus 82 ~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHTSCEEEEEEC
T ss_pred HHhhcccCCceEEEECC
Confidence 32 2346777774
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.00 E-value=8.7e-06 Score=76.49 Aligned_cols=99 Identities=13% Similarity=0.035 Sum_probs=65.2
Q ss_pred CCeEEEeCCcccchhhhhc----------C--------CCeEEEEcCCHHHHHhCCCC-------Cce--EEeecccccC
Q 023470 98 GSEVLDLMSSWVSHLPQEV----------S--------YKRVVGHGLNAQELAKNPRL-------EYF--IVKDLNQDQK 150 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~~----------~--------~~~v~giD~s~~~l~~~~~~-------~~~--~~~d~~~~~~ 150 (282)
..+|||.+||+|..+.... . ..+++|+|+++.+++.|+.+ ..+ ..+|.. ..
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL--~~ 322 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSF--LD 322 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTT--TS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchh--cC
Confidence 3489999999987654321 0 46899999999887655411 122 333331 11
Q ss_pred CCCCCCceeEEEec--chhh-c----------------------cC----CHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 151 LEFDHCSFDAVVCA--VSVQ-Y----------------------LQ----QPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 151 l~~~~~s~D~v~~~--~~l~-~----------------------~~----~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
-.+.+.+||+|+++ +... + ++ ..-.++..+.+.|||||++.+.+|+..
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 12346789999998 3321 1 11 112589999999999999999998753
No 274
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.98 E-value=2.8e-05 Score=66.51 Aligned_cols=109 Identities=17% Similarity=0.108 Sum_probs=66.3
Q ss_pred HHHHHHHh-hCCCCCeEEEeCCccc---chhhhhcCCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCCCCCCc
Q 023470 86 TLTNLYRQ-MLRPGSEVLDLMSSWV---SHLPQEVSYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLEFDHCS 157 (282)
Q Consensus 86 ~~~~~~~~-~~~~~~~vLDiGcG~~---~~~~~~~~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~~~~~s 157 (282)
.|.++... .+.++.+|||+||+.| ..+....+...|+|+|++..+...... ........... ....+..+.
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~-di~~l~~~~ 147 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS-NVFTMPTEP 147 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-CTTTSCCCC
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCc-eeeecCCCC
Confidence 44444433 4567889999999644 444443455689999998654222111 01112111110 222345678
Q ss_pred eeEEEecchhhccCCH-------HHHHHHHHHcccCC-cEEEEEEcC
Q 023470 158 FDAVVCAVSVQYLQQP-------EKVFAEVFRVLKPG-GVFIVSFSN 196 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~li~~~~~ 196 (282)
+|+|+|..+.+ .... ..+++-+.++|+|| |.|++.+-.
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 99999987665 3322 12577778999999 999998776
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.96 E-value=2.5e-06 Score=72.59 Aligned_cols=95 Identities=8% Similarity=-0.083 Sum_probs=59.0
Q ss_pred CCCeEEEeCCcccchhhhh-cCCCeEEEEcCCH-------HHHHhCCCC---------CceEEeecccccC-CC-CCC--
Q 023470 97 PGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNA-------QELAKNPRL---------EYFIVKDLNQDQK-LE-FDH-- 155 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~-------~~l~~~~~~---------~~~~~~d~~~~~~-l~-~~~-- 155 (282)
++.+|||+|||+|...... ..+.+|+|+|+|+ .+++.++.+ ..+..+|. .+ ++ +++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~---~~~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA---AEQMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH---HHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH---HHHHHhhhccC
Confidence 5678999999988643221 1467999999999 888766432 34555555 33 22 333
Q ss_pred CceeEEEecchhhcc--------------------CCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 156 CSFDAVVCAVSVQYL--------------------QQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~--------------------~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++||+|++.-.+.+. .+.+.++.++.++.+. ++++..|.
T Consensus 160 ~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~ 218 (258)
T 2r6z_A 160 GKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPR 218 (258)
T ss_dssp CCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEET
T ss_pred CCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCC
Confidence 689999997544332 1334466677777643 45555443
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.96 E-value=5.5e-06 Score=80.24 Aligned_cols=80 Identities=11% Similarity=0.118 Sum_probs=52.1
Q ss_pred CeEEEEcCCHHHHHhCCCC---------CceEEeecccccCC--CCCCCceeEEEec--chhhccC--CHHH---HHHHH
Q 023470 119 KRVVGHGLNAQELAKNPRL---------EYFIVKDLNQDQKL--EFDHCSFDAVVCA--VSVQYLQ--QPEK---VFAEV 180 (282)
Q Consensus 119 ~~v~giD~s~~~l~~~~~~---------~~~~~~d~~~~~~l--~~~~~s~D~v~~~--~~l~~~~--~~~~---~l~~~ 180 (282)
.+|+|+|+++.|++.++.+ ..+...|+ .++ +..+++||+|+++ +....-. +... .+.++
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~---~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV---AQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCG---GGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHH
Confidence 5899999999999765532 25667776 444 3334489999999 5433221 2233 45555
Q ss_pred HHcccCCcEEEEEEcCchhHH
Q 023470 181 FRVLKPGGVFIVSFSNRMFYE 201 (282)
Q Consensus 181 ~r~LkpgG~li~~~~~~~~~~ 201 (282)
.+.+.|||.+++.++++.+..
T Consensus 334 lk~~~~g~~~~ilt~~~~l~~ 354 (703)
T 3v97_A 334 MKNQFGGWNLSLFSASPDLLS 354 (703)
T ss_dssp HHHHCTTCEEEEEESCHHHHH
T ss_pred HHhhCCCCeEEEEeCCHHHHH
Confidence 566678999999888765543
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.94 E-value=6.7e-05 Score=63.37 Aligned_cols=117 Identities=13% Similarity=0.103 Sum_probs=64.5
Q ss_pred CCCCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCC----CceEEeecccccCCCCCCC--ceeEEEecch
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRL----EYFIVKDLNQDQKLEFDHC--SFDAVVCAVS 166 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~----~~~~~~d~~~~~~l~~~~~--s~D~v~~~~~ 166 (282)
+.++.+|||||||+|....... +..+|+|+|+++.|++.++.. ..+..+|+ ..+++++. .+ .|+++.-
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~---~~~~~~~~~~~~-~vv~NlP 104 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDA---SKFPFCSLGKEL-KVVGNLP 104 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCT---TTCCGGGSCSSE-EEEEECC
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcch---hhCChhHccCCc-EEEEECc
Confidence 3467899999999887544433 348999999999999776543 24556666 55555432 23 4555432
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEEEcCchhHHHHHHhhhcCCCCcchhhHHHHH
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYGRVQLVVQYF 223 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (282)
.++. ...+..+.+....-..+++.+.. .......+ ...|..+.....++
T Consensus 105 -y~i~--~~il~~ll~~~~~~~~~~~m~Qk-eva~Rl~a----~k~yg~lsv~~q~~ 153 (249)
T 3ftd_A 105 -YNVA--SLIIENTVYNKDCVPLAVFMVQK-EVAEKLQG----KKDTGWLSVFVRTF 153 (249)
T ss_dssp -TTTH--HHHHHHHHHTGGGCSEEEEEEEH-HHHHHHHT----SSCCCHHHHHHHHH
T ss_pred -hhcc--HHHHHHHHhcCCCCceEEEEEeH-HHHHHhhc----cccccHHHHHHHhH
Confidence 2221 23444444433323444444332 22222212 55666666555544
No 278
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.92 E-value=5.5e-06 Score=74.57 Aligned_cols=93 Identities=16% Similarity=0.090 Sum_probs=61.7
Q ss_pred CCCeEEEeCCcccchh---hhhcCC-CeEEEEcCCHHHHHhCCCC----------CceEEeecccccCCC-CCCCceeEE
Q 023470 97 PGSEVLDLMSSWVSHL---PQEVSY-KRVVGHGLNAQELAKNPRL----------EYFIVKDLNQDQKLE-FDHCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~---~~~~~~-~~v~giD~s~~~l~~~~~~----------~~~~~~d~~~~~~l~-~~~~s~D~v 161 (282)
++.+|||++||+|... +...++ .+|+++|+++.+++.++.+ ..+..+|.. .-+. ...++||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~--~~l~~~~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEAN--FFLRKEWGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH--HHHHSCCSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHH--HHHHHhhCCCCcEE
Confidence 5789999999987542 222233 6899999999887654321 223333431 1111 114579999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
++.- ...+..++..+.+.|+|||.++++..
T Consensus 130 ~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 130 DLDP----FGTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EECC----SSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECC----CcCHHHHHHHHHHHhCCCCEEEEEec
Confidence 9864 12336789999999999999988864
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.92 E-value=9.9e-06 Score=62.11 Aligned_cols=97 Identities=10% Similarity=0.101 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCC-Cce
Q 023470 83 FISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDH-CSF 158 (282)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~-~s~ 158 (282)
+.+.+.+.+.+...++.+|||||||.+...+.. ..+..|+++|+++..++ ++..|+ .+..... ..|
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-------~v~dDi---F~P~~~~Y~~~ 90 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-------IVRDDI---TSPRMEIYRGA 90 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------EECCCS---SSCCHHHHTTE
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------eEEccC---CCCcccccCCc
Confidence 455677777777777889999999988533222 26789999999997765 666666 3322111 379
Q ss_pred eEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 159 DAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 159 D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
|+|.+..- -++....+-++.+.. |.-++|..
T Consensus 91 DLIYsirP---P~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 91 ALIYSIRP---PAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EEEEEESC---CTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred CEEEEcCC---CHHHHHHHHHHHHHc--CCCEEEEc
Confidence 99988653 223344444444432 66677763
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.88 E-value=5.9e-05 Score=65.02 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=68.4
Q ss_pred CCCCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHhCCC-------------CCceEEeecccccCCCCCCCce
Q 023470 95 LRPGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAKNPR-------------LEYFIVKDLNQDQKLEFDHCSF 158 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~~~~-------------~~~~~~~d~~~~~~l~~~~~s~ 158 (282)
.+...+||=||-|.|..+... .+..+|+.+||+++.++.+++ +.+..++|.. .-+.-..++|
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~--~~l~~~~~~y 158 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQTSQTF 158 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT--TTTSCSSCCE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH--HHHhhccccC
Confidence 456789999999877655433 256799999999998875542 1244555552 2334456789
Q ss_pred eEEEecchhhccC----CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 159 DAVVCAVSVQYLQ----QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 159 D~v~~~~~l~~~~----~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
|+|+.-..=..-+ --.++++.+.+.|+|||.++.....+
T Consensus 159 DvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred CEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 9999864311111 11458999999999999999865443
No 281
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.83 E-value=3.8e-05 Score=72.94 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=58.1
Q ss_pred CeEEEeCCcccchh-----hhhcCC--CeEEEEcCCHHHHHh-----C---CCCCceEEeecccccCCCCCCCceeEEEe
Q 023470 99 SEVLDLMSSWVSHL-----PQEVSY--KRVVGHGLNAQELAK-----N---PRLEYFIVKDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 99 ~~vLDiGcG~~~~~-----~~~~~~--~~v~giD~s~~~l~~-----~---~~~~~~~~~d~~~~~~l~~~~~s~D~v~~ 163 (282)
..|||+|||.|-.. +.+..+ .+|+|++-|+.+... . .....++.+++ +++.++ +++|+|||
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~---eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDM---REWVAP-EKADIIVS 434 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCT---TTCCCS-SCEEEEEC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcc---eeccCC-cccCEEEE
Confidence 46999999987541 111122 378999999854311 1 12235677777 777665 67999999
Q ss_pred cc---hhhccCCHHHHHHHHHHcccCCcEEE
Q 023470 164 AV---SVQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 164 ~~---~l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
-. .+-+-.. .+++....|.|||||.++
T Consensus 435 EwMG~fLl~E~m-levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELS-PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCH-HHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCC-HHHHHHHHHhcCCCcEEc
Confidence 72 2222223 368889999999999973
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.82 E-value=1.1e-05 Score=69.31 Aligned_cols=67 Identities=10% Similarity=0.151 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCe----EEEEcCCHHHHHhCCC----CCceEEeecccccCCC
Q 023470 82 GFISTLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKR----VVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLE 152 (282)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~----v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~ 152 (282)
.+.+.+.+.+ .+.++.+|||||||+|....... .+.+ |+|+|++++|++.++. ...+..+|+ ..++
T Consensus 29 ~i~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~---~~~~ 103 (279)
T 3uzu_A 29 GVIDAIVAAI--RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA---LTFD 103 (279)
T ss_dssp HHHHHHHHHH--CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG---GGCC
T ss_pred HHHHHHHHhc--CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh---hcCC
Confidence 4544544443 24578899999999886543332 2234 9999999999976653 235667776 5555
Q ss_pred C
Q 023470 153 F 153 (282)
Q Consensus 153 ~ 153 (282)
+
T Consensus 104 ~ 104 (279)
T 3uzu_A 104 F 104 (279)
T ss_dssp G
T ss_pred h
Confidence 4
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.82 E-value=1.2e-05 Score=76.69 Aligned_cols=91 Identities=15% Similarity=0.018 Sum_probs=59.6
Q ss_pred CCeEEEeCCcccchh----hhhc------------CCCeEEEEcCCHHHHHh--------CCCCCceEEeecccccCCCC
Q 023470 98 GSEVLDLMSSWVSHL----PQEV------------SYKRVVGHGLNAQELAK--------NPRLEYFIVKDLNQDQKLEF 153 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~----~~~~------------~~~~v~giD~s~~~l~~--------~~~~~~~~~~d~~~~~~l~~ 153 (282)
+..|||||||+|-.. .+.. ...+|+|+|-|+.++.. -.....++.+++ +++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~---eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDM---RSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCG---GGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCch---hhccc
Confidence 357999999987652 1111 13499999999854321 113356777777 66655
Q ss_pred C-----CCceeEEEecchhhcc--CCHHHHHHHHHHcccCCcEEE
Q 023470 154 D-----HCSFDAVVCAVSVQYL--QQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 154 ~-----~~s~D~v~~~~~l~~~--~~~~~~l~~~~r~LkpgG~li 191 (282)
+ .+.+|+|||-..=... .-..++|..+.|.|||||.++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 2 4789999997431111 123468888899999999874
No 284
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.78 E-value=9.2e-06 Score=70.63 Aligned_cols=68 Identities=10% Similarity=0.103 Sum_probs=47.2
Q ss_pred CCCCCeEEEeCCcccchh---hhhcCCCeEEEEcCCHHHHHhCCC-------CCceEEeecccccCCC--C---CCCcee
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEVSYKRVVGHGLNAQELAKNPR-------LEYFIVKDLNQDQKLE--F---DHCSFD 159 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~~~~~v~giD~s~~~l~~~~~-------~~~~~~~d~~~~~~l~--~---~~~s~D 159 (282)
+.++.+|||+|||+|.+. +...++.+|+|+|+|+.|++.++. ...+..+|+ ..++ + ..++||
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~---~~l~~~l~~~g~~~~D 100 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLKTLGIEKVD 100 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHHHTTCSCEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCH---HHHHHHHHhcCCCCCC
Confidence 347889999999988653 333356899999999999975542 234566665 3432 1 125799
Q ss_pred EEEecc
Q 023470 160 AVVCAV 165 (282)
Q Consensus 160 ~v~~~~ 165 (282)
+|++..
T Consensus 101 ~Vl~D~ 106 (301)
T 1m6y_A 101 GILMDL 106 (301)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999864
No 285
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.61 E-value=1.3e-05 Score=72.39 Aligned_cols=68 Identities=13% Similarity=0.130 Sum_probs=46.1
Q ss_pred hCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCCCC----------CceEEeecccccC-CCC-CCCceeE
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNPRL----------EYFIVKDLNQDQK-LEF-DHCSFDA 160 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~~~----------~~~~~~d~~~~~~-l~~-~~~s~D~ 160 (282)
.+.++.+|||+|||+|...... ..+.+|+|+|+|+.|++.++.+ ..+..+|+ .+ ++. ++++||+
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da---~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDF---KEYLPLIKTFHPDY 166 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCG---GGSHHHHHHHCCSE
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcH---HHhhhhccCCCceE
Confidence 4445889999999988653222 2567999999999998655322 34555665 33 221 2357999
Q ss_pred EEec
Q 023470 161 VVCA 164 (282)
Q Consensus 161 v~~~ 164 (282)
|++.
T Consensus 167 V~lD 170 (410)
T 3ll7_A 167 IYVD 170 (410)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9996
No 286
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.55 E-value=0.00023 Score=60.66 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=67.5
Q ss_pred HHHHHHHh-hCCCCCeEEEeCCccc---chhhhhcCCCeEEEEcCCHHHHHh-------CCCCCceEEe-ecccccCCCC
Q 023470 86 TLTNLYRQ-MLRPGSEVLDLMSSWV---SHLPQEVSYKRVVGHGLNAQELAK-------NPRLEYFIVK-DLNQDQKLEF 153 (282)
Q Consensus 86 ~~~~~~~~-~~~~~~~vLDiGcG~~---~~~~~~~~~~~v~giD~s~~~l~~-------~~~~~~~~~~-d~~~~~~l~~ 153 (282)
.|..+... .+.++..|||+||+.| .+.+...+...|+|+|+...--+. ......+... |+ ..++
T Consensus 82 KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv---~~l~- 157 (321)
T 3lkz_A 82 KLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDV---FYRP- 157 (321)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCT---TSSC-
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCH---hhCC-
Confidence 45555544 4567889999999644 444454456689999998652111 0111122222 22 3343
Q ss_pred CCCceeEEEecchhhccCCHHH-------HHHHHHHcccCC-cEEEEEEcCc
Q 023470 154 DHCSFDAVVCAVSVQYLQQPEK-------VFAEVFRVLKPG-GVFIVSFSNR 197 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~~~-------~l~~~~r~Lkpg-G~li~~~~~~ 197 (282)
...+|+|+|--+ +--+++.. +|+-+.++|++| |-+++-+..+
T Consensus 158 -~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 158 -SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred -CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 366999999877 65555432 667778899999 9999998877
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.50 E-value=0.00022 Score=59.73 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=60.0
Q ss_pred HHHHHHHh-hCCCCCeEEEeCCc---ccchhhhhcCCCeEEEEcCCHH--HHHhCC--CCCceEE---e-ecccccCCCC
Q 023470 86 TLTNLYRQ-MLRPGSEVLDLMSS---WVSHLPQEVSYKRVVGHGLNAQ--ELAKNP--RLEYFIV---K-DLNQDQKLEF 153 (282)
Q Consensus 86 ~~~~~~~~-~~~~~~~vLDiGcG---~~~~~~~~~~~~~v~giD~s~~--~l~~~~--~~~~~~~---~-d~~~~~~l~~ 153 (282)
.|.++-.+ .++++.+|||+||+ |..+.+...+...|.|.++... +..... ...+++. + |+ .++
T Consensus 61 KL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df---~~~-- 135 (269)
T 2px2_A 61 KLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDV---FYK-- 135 (269)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCG---GGS--
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCc---cCC--
Confidence 33344333 56789999999994 6556655422223344443332 211111 1113333 4 66 333
Q ss_pred CCCceeEEEecchhhccCCH----H---HHHHHHHHcccCCc-EEEEEEcCc
Q 023470 154 DHCSFDAVVCAVSVQYLQQP----E---KVFAEVFRVLKPGG-VFIVSFSNR 197 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~----~---~~l~~~~r~LkpgG-~li~~~~~~ 197 (282)
+...+|+|+|-.+-. ..+. . .+|.-+.++|+||| .|++-+-++
T Consensus 136 ~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 136 PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 346799999986543 2221 1 15766779999999 898887664
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.46 E-value=0.00063 Score=60.29 Aligned_cols=85 Identities=20% Similarity=0.200 Sum_probs=55.8
Q ss_pred hCCCCCeEEEeCCc---ccchhhhhcCCCeEEEEcCCHHHH-HhCCCCCceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 94 MLRPGSEVLDLMSS---WVSHLPQEVSYKRVVGHGLNAQEL-AKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 94 ~~~~~~~vLDiGcG---~~~~~~~~~~~~~v~giD~s~~~l-~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
.+.++++|||+||. |...+.. .+.+|+|||+.+-.- ........+...|. .....+.+.||+|+|-.+.
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~--rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~---~~~~~~~~~~D~vvsDm~~-- 280 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVK--RNMWVYSVDNGPMAQSLMDTGQVTWLREDG---FKFRPTRSNISWMVCDMVE-- 280 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHH--TTCEEEEECSSCCCHHHHTTTCEEEECSCT---TTCCCCSSCEEEEEECCSS--
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHH--CCCEEEEEEhhhcChhhccCCCeEEEeCcc---ccccCCCCCcCEEEEcCCC--
Confidence 46789999999994 5555554 578999999874211 11223344555555 5555556789999997754
Q ss_pred cCCHHHHHHHHHHcccCC
Q 023470 170 LQQPEKVFAEVFRVLKPG 187 (282)
Q Consensus 170 ~~~~~~~l~~~~r~Lkpg 187 (282)
++...+.-+.++|..|
T Consensus 281 --~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 281 --KPAKVAALMAQWLVNG 296 (375)
T ss_dssp --CHHHHHHHHHHHHHTT
T ss_pred --ChHHhHHHHHHHHhcc
Confidence 5566666666666655
No 289
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.39 E-value=0.00081 Score=55.58 Aligned_cols=107 Identities=19% Similarity=0.223 Sum_probs=68.3
Q ss_pred HHHHHHHh-hCCCCCeEEEeCCc---ccchhhhhcCCCeEEEEcCCHHHHHh-------CCCCCceEEe-ecccccCCCC
Q 023470 86 TLTNLYRQ-MLRPGSEVLDLMSS---WVSHLPQEVSYKRVVGHGLNAQELAK-------NPRLEYFIVK-DLNQDQKLEF 153 (282)
Q Consensus 86 ~~~~~~~~-~~~~~~~vLDiGcG---~~~~~~~~~~~~~v~giD~s~~~l~~-------~~~~~~~~~~-d~~~~~~l~~ 153 (282)
.+.++..+ .+.++..|||+||+ |..+.+...+..+|+|+|+-..--+. ......|..+ |+ ..++
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv---~~~~- 141 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDV---FYLP- 141 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCG---GGCC-
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccce---eecC-
Confidence 44555444 45678899999995 44455555566789999998643321 1123344544 54 3333
Q ss_pred CCCceeEEEecchhhccCCHH-------HHHHHHHHcccCCcEEEEEEcCchh
Q 023470 154 DHCSFDAVVCAVSVQYLQQPE-------KVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~~-------~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
..++|+|+|-.+= -.+++. .+|+-+.++|++ |.+++-+..+..
T Consensus 142 -~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 142 -PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp -CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred -CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 3679999998654 222322 167777899999 888888877644
No 290
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.36 E-value=3.2e-05 Score=65.66 Aligned_cols=90 Identities=14% Similarity=-0.072 Sum_probs=51.2
Q ss_pred CCC--CeEEEeCCcccchhhhh-cCCCeEEEEcCCHHH-------HHhCC----------CCCceEEeecccccCCCCCC
Q 023470 96 RPG--SEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQE-------LAKNP----------RLEYFIVKDLNQDQKLEFDH 155 (282)
Q Consensus 96 ~~~--~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~-------l~~~~----------~~~~~~~~d~~~~~~l~~~~ 155 (282)
.++ .+|||+|||+|...... ..+++|+++|+++.+ ++.++ .+..+..+|.. .-++...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~--~~L~~~~ 162 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL--TALTDIT 162 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH--HHSTTCS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH--HHHHhCc
Confidence 456 79999999988642211 135689999999964 33222 11234555542 1133112
Q ss_pred CceeEEEecchhhccCCHHHHHHHHHHcccCCc
Q 023470 156 CSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGG 188 (282)
Q Consensus 156 ~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG 188 (282)
.+||+|++.-...+- ....++++..++|++.+
T Consensus 163 ~~fDvV~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred ccCCEEEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 369999998666553 22356666777776654
No 291
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.31 E-value=0.0001 Score=62.53 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=26.9
Q ss_pred ceeEEEec-chhhccCC--HHHHHHHHHHcccCCcEEEE
Q 023470 157 SFDAVVCA-VSVQYLQQ--PEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 157 s~D~v~~~-~~l~~~~~--~~~~l~~~~r~LkpgG~li~ 192 (282)
.||+|+.- ++-...++ -+.+++.++++|||||.|+.
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 79999985 33322222 35799999999999999884
No 292
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.26 E-value=0.00039 Score=59.26 Aligned_cols=105 Identities=11% Similarity=0.098 Sum_probs=64.7
Q ss_pred HHHHHHHHh---hCCCCCeEEEeCCc------ccchhh-hhcCC-CeEEEEcCCHHHHHhCCCCCceEEeecccccCCCC
Q 023470 85 STLTNLYRQ---MLRPGSEVLDLMSS------WVSHLP-QEVSY-KRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEF 153 (282)
Q Consensus 85 ~~~~~~~~~---~~~~~~~vLDiGcG------~~~~~~-~~~~~-~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~ 153 (282)
.++-+.+.. -++.+++|||+|+| -|.... +..+. ..|+++|+.+-.. ....++++|. ..+..
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s----da~~~IqGD~---~~~~~ 166 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS----DADSTLIGDC---ATVHT 166 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC----SSSEEEESCG---GGEEE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc----CCCeEEEccc---ccccc
Confidence 344455533 23568999999974 133333 33343 6999999987321 1224577776 33322
Q ss_pred CCCceeEEEecchhh---cc--CC-----H-HHHHHHHHHcccCCcEEEEEEcCc
Q 023470 154 DHCSFDAVVCAVSVQ---YL--QQ-----P-EKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~---~~--~~-----~-~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+.||+|+|-.+-. +. +. + +.++.=+.++|+|||.|++-+-..
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 47799999985322 11 11 2 346777888999999999986554
No 293
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.06 E-value=0.00023 Score=77.64 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=45.8
Q ss_pred CCCeEEEeCCcccchhhh---hcC-----CCeEEEEcCCHHHHHhCCCCCceEEeeccc---c-cC-CCCCCCceeEEEe
Q 023470 97 PGSEVLDLMSSWVSHLPQ---EVS-----YKRVVGHGLNAQELAKNPRLEYFIVKDLNQ---D-QK-LEFDHCSFDAVVC 163 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~---~~~-----~~~v~giD~s~~~l~~~~~~~~~~~~d~~~---~-~~-l~~~~~s~D~v~~ 163 (282)
+..+|||||.|+|..... ... ..+++..|+|+...+.+++... ..|+.. + .. .++...+||+|++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~--~~di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLE--QLHVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHH--HHTEEEECCCSSCCCC-----CCEEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhh--hcccccccccccccccCCCCceeEEEE
Confidence 567999999987653222 111 3478899999877766665421 111110 0 12 1334567999999
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
..++|..++....+.+++++|||||++++..
T Consensus 1318 ~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1318 NCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ECC--------------------CCEEEEEE
T ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999988999999999999999999988753
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.99 E-value=0.0013 Score=61.46 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=62.6
Q ss_pred CCCeEEEeCCcccchhhhhc----------------CCCeEEEEcCCHHHHHhCC--------CCCceEEeecccccCCC
Q 023470 97 PGSEVLDLMSSWVSHLPQEV----------------SYKRVVGHGLNAQELAKNP--------RLEYFIVKDLNQDQKLE 152 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~----------------~~~~v~giD~s~~~l~~~~--------~~~~~~~~d~~~~~~l~ 152 (282)
++.+|+|-+||+|.++.... ....++|+|+++.+...|+ ...++..+|. ...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dt---L~~~ 293 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENS---LRFP 293 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCT---TCSC
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccccccc---ccCc
Confidence 46789999999988764321 1357999999998765543 2233444443 1111
Q ss_pred ----CCCCceeEEEec--chhhcc-----------C--CH-HHHHHHHHHccc-------CCcEEEEEEcCc
Q 023470 153 ----FDHCSFDAVVCA--VSVQYL-----------Q--QP-EKVFAEVFRVLK-------PGGVFIVSFSNR 197 (282)
Q Consensus 153 ----~~~~s~D~v~~~--~~l~~~-----------~--~~-~~~l~~~~r~Lk-------pgG~li~~~~~~ 197 (282)
.+...||+|+++ |...+- + +. -.++..+.+.|| |||++.+.+|+.
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 123579999999 332111 0 11 126778888887 799999998865
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.84 E-value=0.00047 Score=61.23 Aligned_cols=101 Identities=22% Similarity=0.255 Sum_probs=59.9
Q ss_pred hCCCCCeEEEeCCcccc---hhhhhcCCCeEEEEcCCHHHHHhCC------------CCCceEEeecccccCCC-CCCCc
Q 023470 94 MLRPGSEVLDLMSSWVS---HLPQEVSYKRVVGHGLNAQELAKNP------------RLEYFIVKDLNQDQKLE-FDHCS 157 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~---~~~~~~~~~~v~giD~s~~~l~~~~------------~~~~~~~~d~~~~~~l~-~~~~s 157 (282)
...++.+|||++||-|. +++.......|+++|+|+.-+...+ ......+...+. ..++ ...+.
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~-~~~~~~~~~~ 223 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG-RKWGELEGDT 223 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG-GGHHHHSTTC
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch-hhcchhcccc
Confidence 35578999999996543 4444445568999999986443211 001222222211 2322 34578
Q ss_pred eeEEEec----c---h-hhccCC---------------H-HHHHHHHHHcccCCcEEEEEEc
Q 023470 158 FDAVVCA----V---S-VQYLQQ---------------P-EKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 158 ~D~v~~~----~---~-l~~~~~---------------~-~~~l~~~~r~LkpgG~li~~~~ 195 (282)
||.|++- . . +..-++ . ..+|..+.+.|||||+|+-++-
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 9999963 2 1 111111 1 2378899999999999998753
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.71 E-value=0.0016 Score=57.91 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCCeEEEeCCcccchhhhhc--CCCeEEEEcCCHHHHHhCCCCC----------------ceEEeecccc-cCCCCCCCc
Q 023470 97 PGSEVLDLMSSWVSHLPQEV--SYKRVVGHGLNAQELAKNPRLE----------------YFIVKDLNQD-QKLEFDHCS 157 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~----------------~~~~~d~~~~-~~l~~~~~s 157 (282)
+..+||=||.|.|..+.... +..+|+.+||+++.++.+++.. +..+.|...- ....-..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 46789999998766544332 4579999999999987665321 2223332100 011112457
Q ss_pred eeEEEecchhhcc-CCH---------HHHHHHHHHcccCCcEEEEEE
Q 023470 158 FDAVVCAVSVQYL-QQP---------EKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 158 ~D~v~~~~~l~~~-~~~---------~~~l~~~~r~LkpgG~li~~~ 194 (282)
||+|+.-..-... .++ .++++.+.++|+|||.++...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999986321111 111 357889999999999998753
No 297
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.64 E-value=0.0064 Score=52.04 Aligned_cols=94 Identities=7% Similarity=0.002 Sum_probs=59.2
Q ss_pred CCCeEEEeCCcccc---hhhhhc-----CCCeEEEEcCCHH---------------------------------HHHhCC
Q 023470 97 PGSEVLDLMSSWVS---HLPQEV-----SYKRVVGHGLNAQ---------------------------------ELAKNP 135 (282)
Q Consensus 97 ~~~~vLDiGcG~~~---~~~~~~-----~~~~v~giD~s~~---------------------------------~l~~~~ 135 (282)
....|||+|+..|. .++... +..+|+++|..+. .++++.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 45689999995443 222222 3679999996321 112221
Q ss_pred ---CCCceEEeecccccCCC-CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEE
Q 023470 136 ---RLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 136 ---~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
....++.++.. +.++ +++++||+|..-.-. -..-...++.+...|+|||.+++..
T Consensus 186 l~~~~I~li~Gda~--etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 LLDEQVRFLPGWFK--DTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CCSTTEEEEESCHH--HHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCcCceEEEEeCHH--HHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 33456666663 3343 345789999887532 1123468999999999999998864
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.47 E-value=0.0028 Score=54.71 Aligned_cols=42 Identities=19% Similarity=0.070 Sum_probs=32.8
Q ss_pred hCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCC
Q 023470 94 MLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNP 135 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~ 135 (282)
...++..|||++||+|...... ..+.+++|+|+++.+++.++
T Consensus 232 ~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~ 274 (297)
T 2zig_A 232 FSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAK 274 (297)
T ss_dssp HCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 3457889999999988754433 36789999999999987654
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.21 E-value=0.0047 Score=52.65 Aligned_cols=68 Identities=16% Similarity=0.247 Sum_probs=44.9
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCC----CCceEEeecccccCCC-----CCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQDQKLE-----FDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~~~l~-----~~~~s~D~v~~~ 164 (282)
+.++..+||.+||.|.+..... .+.+|+|+|.++.+++.++. ...++..+. .+++ ...+++|.|++.
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f---~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCc---chHHHHHHHcCCCCcCEEEeC
Confidence 4578899999999876543322 26799999999999866543 234445554 2221 122579999975
Q ss_pred c
Q 023470 165 V 165 (282)
Q Consensus 165 ~ 165 (282)
.
T Consensus 97 L 97 (285)
T 1wg8_A 97 L 97 (285)
T ss_dssp C
T ss_pred C
Confidence 3
No 300
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.90 E-value=0.012 Score=47.20 Aligned_cols=93 Identities=22% Similarity=0.198 Sum_probs=58.1
Q ss_pred hCCCCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||..|+ |.|....+.. .+.+|+++|.+++.++.++......+.+.... +.+ . .....+|+++.+
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 114 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNS 114 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence 3567889999995 3555443322 45799999999887654433321123343211 000 0 112469999976
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. ...++.+.+.|+|||++++.
T Consensus 115 ~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 115 LA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CC-------THHHHHHHHTEEEEEEEEEC
T ss_pred Cc-------hHHHHHHHHHhccCCEEEEE
Confidence 53 24678999999999998764
No 301
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.45 E-value=0.067 Score=47.79 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=61.4
Q ss_pred hCCCCCeEEEeCCcc-cch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC------CC-CCCceeEEE
Q 023470 94 MLRPGSEVLDLMSSW-VSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL------EF-DHCSFDAVV 162 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~-~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l------~~-~~~s~D~v~ 162 (282)
.+.++.+||-+|||. |.. +++..+..+|+++|.|++.++.++...- .+.+... .++ .. ....+|+|+
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~~i~~~~-~~~~~~~~~~~~~g~g~Dvvi 259 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF-ETIDLRN-SAPLRDQIDQILGKPEVDCGV 259 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC-EEEETTS-SSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-cEEcCCC-cchHHHHHHHHhCCCCCCEEE
Confidence 466889999999973 432 3333344499999999988776665442 2333321 111 00 123699998
Q ss_pred ecchhhcc--------CCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYL--------QQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~--------~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-+-.-... .++...++.+.++|++||++++.
T Consensus 260 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 260 DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 77543210 02345789999999999998753
No 302
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.081 Score=47.20 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=62.9
Q ss_pred hhCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccC----C-C-CCCCceeEEE
Q 023470 93 QMLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQK----L-E-FDHCSFDAVV 162 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~----l-~-~~~~s~D~v~ 162 (282)
..+.++.+||-+||| .|.. +++..+..+|+++|.+++.++.++...-- +.+...... + . .....+|+|+
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 356688999999996 3332 33333444899999999877766544321 233221010 0 0 0123699999
Q ss_pred ecchhh---------ccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQ---------YLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~---------~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-+-.-. |.+++...++.+.++|++||++++.
T Consensus 260 d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 875422 3345667899999999999998754
No 303
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.62 E-value=0.035 Score=48.23 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=58.7
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccC----C-CCCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQK----L-EFDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~----l-~~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|| | .|....+.. .+.+|+++|.+++.++.++......+.|.....+ + ....+.+|+++.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 3567889999998 3 554433322 5679999999987765543332223334422001 0 0112469999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ..++.+.+.|++||++++.
T Consensus 222 ~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 222 VGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp SCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred CCh-------HHHHHHHHHHhcCCEEEEE
Confidence 652 3578899999999998764
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.32 E-value=0.035 Score=49.13 Aligned_cols=94 Identities=10% Similarity=0.063 Sum_probs=58.5
Q ss_pred hCCCCCeEEEeCCcc-cch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-CCCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMSSW-VSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-EFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~-~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~~~~~s~D~v~~~~ 165 (282)
.+.++.+||-+|||. |.. +++..+..+|+++|.+++.++.++....-.+.+.... +.+ ...++.+|+|+-+-
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 456789999999973 432 2333344479999999987766543321122232110 001 11123699998765
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. ....++.+.+.|++||++++.
T Consensus 267 g------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 267 G------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp C------CHHHHHHHHHTEEEEEEEEEC
T ss_pred C------CHHHHHHHHHHHhcCCEEEEe
Confidence 4 145788999999999998764
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.22 E-value=0.068 Score=44.91 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=34.1
Q ss_pred HHHhhCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCC
Q 023470 90 LYRQMLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNP 135 (282)
Q Consensus 90 ~~~~~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~ 135 (282)
++.....++..|||..||.|...... ..+.+++|+|+++.+++.++
T Consensus 205 ~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 205 IIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 33444568899999999988654333 35789999999998876554
No 306
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.90 E-value=0.23 Score=43.87 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=59.7
Q ss_pred hhCCCCCeEEEeCCcc-cch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc------cC-CCCCCCceeEE
Q 023470 93 QMLRPGSEVLDLMSSW-VSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD------QK-LEFDHCSFDAV 161 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG~-~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~------~~-l~~~~~s~D~v 161 (282)
..+.++.+||=+|+|. |.. +++..+..+|+++|.+++.++.++....-.+.+.... .. .....+.+|+|
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvv 257 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVV 257 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEE
Confidence 3567889999999963 332 3333344499999999987765544321122232110 01 01223479999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-+-. -...++.+.+.|++||++++.
T Consensus 258 id~~G------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 258 IECAG------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EECCC------CHHHHHHHHHHhccCCEEEEE
Confidence 97643 245788999999999998864
No 307
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.87 E-value=0.071 Score=46.34 Aligned_cols=92 Identities=16% Similarity=0.055 Sum_probs=59.2
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhC-CCCCceEEeecccccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKN-PRLEYFIVKDLNQDQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~-~~~~~~~~~d~~~~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-.|| | .|....+. ..+.+|+++|.+++.++.+ +....-.+.+... .++ ....+.+|+|+.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN-EDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTT-SCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC-HHHHHHHHHhcCCCceEEEE
Confidence 4668899999999 4 44433322 2567999999998877655 4433222333321 110 011246999988
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-. ...+..+.+.|++||++++.
T Consensus 225 ~~g-------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 225 NVG-------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp SSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCC-------cchHHHHHHHHhhCCEEEEE
Confidence 665 24788999999999998864
No 308
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.76 E-value=0.11 Score=45.16 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=58.5
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCC-CCCceEEeecccccCCC-----CCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNP-RLEYFIVKDLNQDQKLE-----FDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~-~~~~~~~~d~~~~~~l~-----~~~~s~D~v~~ 163 (282)
.+.++.+||-.|| | .|....+.. .+.+|+++|.+++.++.++ ....-.+.|.....++. ...+.+|+|+.
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 231 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE 231 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence 3567889999998 4 454333322 4679999999987766544 33212233432111110 11246999998
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-.- ..++.+.+.|++||++++.
T Consensus 232 ~~g~-------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 232 NVGG-------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp SSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 7642 3688999999999998764
No 309
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.57 E-value=0.2 Score=44.09 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=57.6
Q ss_pred CCCeEEEeC-Cc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cC-CCCCCCceeEEEecchhh
Q 023470 97 PGSEVLDLM-SS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QK-LEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 97 ~~~~vLDiG-cG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~-l~~~~~s~D~v~~~~~l~ 168 (282)
++.+||=+| +| .|.. +++...+.+|+++|.+++.++.+++...-.+.+...+ +. .....+.+|+|+-+-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g-- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH-- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCC--
Confidence 567899998 65 3432 3333367899999999877665544332222232211 00 0123457999987643
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-...+..+.++|++||++++.
T Consensus 249 ----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 ----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ----HHHHHHHHHHHSCTTCEEEEC
T ss_pred ----chhhHHHHHHHhcCCCEEEEE
Confidence 245788999999999999865
No 310
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.54 E-value=0.18 Score=43.83 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=58.3
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----CCCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----EFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~~~~~s~D~v~~~~ 165 (282)
.+.++.+||-+|+| .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++ ... +.+|+|+.+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~-~~~~~~~~~~~-~~~d~vid~~ 238 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLK-EDAAKFMKEKV-GGVHAAVVTA 238 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTT-SCHHHHHHHHH-SSEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCC-ccHHHHHHHHh-CCCCEEEECC
Confidence 56788999999996 34433222 24569999999988776554332212333321 111 001 3699998765
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.. ...++.+.+.|++||++++.
T Consensus 239 g~------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 239 VS------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp CC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CC------HHHHHHHHHHhhcCCEEEEe
Confidence 41 35678899999999998754
No 311
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.45 E-value=0.14 Score=44.84 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=58.1
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCCC--CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKLE--FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l~--~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|+ | .|....+. ..+.+|+++|.+++.++.++....-.+.+.... ..+. .....+|+|+.+
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 4567889999998 4 44433322 256799999999877655443322223333211 0000 112369999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..- ..+..+.++|++||++++.
T Consensus 247 ~G~-------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 247 LAN-------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CHH-------HHHHHHHHHEEEEEEEEEC
T ss_pred CCh-------HHHHHHHHhccCCCEEEEE
Confidence 652 3577889999999998764
No 312
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.22 E-value=0.34 Score=42.26 Aligned_cols=94 Identities=11% Similarity=0.011 Sum_probs=57.9
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC----C--CC---CCceeEE
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL----E--FD---HCSFDAV 161 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l----~--~~---~~s~D~v 161 (282)
.+.++.+||-+|+| .|....+. ..+.+|+++|.+++.++.++....-.+.+.....++ . .. ...+|+|
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 56788999999996 34332221 245679999999987765543321122333210011 0 01 2458999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+.+-. ....++.+.++|+|||++++.
T Consensus 245 id~~g------~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 245 IDCSG------NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred EECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 87653 134678899999999998764
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.00 E-value=0.54 Score=41.09 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=57.5
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecc----cc--cCC-CCCCCceeEEE
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLN----QD--QKL-EFDHCSFDAVV 162 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~----~~--~~l-~~~~~s~D~v~ 162 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.+++.++.++....-.+.+.. .+ ..+ ....+.+|+|+
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 46788999999997 3433 23333334999999999876655433211222321 00 011 00014589998
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-+-. -...+..+.++|+|||++++.
T Consensus 248 d~~g------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 248 ECTG------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp ECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred ECCC------ChHHHHHHHHHhcCCCEEEEE
Confidence 7643 145678899999999998764
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.99 E-value=0.16 Score=44.34 Aligned_cols=88 Identities=10% Similarity=0.041 Sum_probs=56.4
Q ss_pred hCCCCCeEEEeCCcc-cchhhhh--cCCCeEEEEcCCHHHHHhCCCCC-ceEEeecccccCCCCCCCceeEEEecchhhc
Q 023470 94 MLRPGSEVLDLMSSW-VSHLPQE--VSYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQDQKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~-~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~ 169 (282)
.+.++.+||-+|+|. |....+. ..+.+|+++|.+++.++.+++.. ...+.+. ..+ . ..+|+|+-+-.-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~---~~~--~-~~~D~vid~~g~~- 245 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDP---KQC--K-EELDFIISTIPTH- 245 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSG---GGC--C-SCEEEEEECCCSC-
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCH---HHH--h-cCCCEEEECCCcH-
Confidence 567889999999973 3322221 24569999999987665554432 1222111 222 2 2799999765421
Q ss_pred cCCHHHHHHHHHHcccCCcEEEEE
Q 023470 170 LQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 170 ~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..++.+.++|+|||++++.
T Consensus 246 -----~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 246 -----YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -----CCHHHHHTTEEEEEEEEEC
T ss_pred -----HHHHHHHHHHhcCCEEEEE
Confidence 2467889999999998865
No 315
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.89 E-value=0.053 Score=46.55 Aligned_cols=44 Identities=32% Similarity=0.665 Sum_probs=31.2
Q ss_pred CCCCceeEEEec--ch-h-h----------------ccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 153 FDHCSFDAVVCA--VS-V-Q----------------YLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 153 ~~~~s~D~v~~~--~~-l-~----------------~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+++++||+|+++ +. . . ++.....+++++.|+|||||.+++.+.+
T Consensus 36 l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 36 FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 456889999988 21 1 1 1112345788999999999999998764
No 316
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.83 E-value=0.12 Score=45.80 Aligned_cols=91 Identities=15% Similarity=0.053 Sum_probs=56.4
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCCCCCCCceeEEEecchh
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l~~~~~s~D~v~~~~~l 167 (282)
.+.++.+||-+|+| .|....+. ..+.+|+++|.|++.++.+++...-.+.+.... ..+. +.+|+|+.+-.-
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~ 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAA 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCC
Confidence 56788999999997 34332221 246689999999876655443221122232110 1221 469999876542
Q ss_pred hccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 168 QYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 168 ~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
...++.+.+.|+|||+++..
T Consensus 268 ------~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 268 ------PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ------CCCHHHHHTTEEEEEEEEEC
T ss_pred ------HHHHHHHHHHhccCCEEEEe
Confidence 12467888999999998754
No 317
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.82 E-value=0.67 Score=39.96 Aligned_cols=98 Identities=21% Similarity=0.124 Sum_probs=60.8
Q ss_pred CeEEEeCCcccchhhhhc-C-CCeEEEEcCCHHHHHhC-----------CCCCceEEeecccc--cCC---CCCCCceeE
Q 023470 99 SEVLDLMSSWVSHLPQEV-S-YKRVVGHGLNAQELAKN-----------PRLEYFIVKDLNQD--QKL---EFDHCSFDA 160 (282)
Q Consensus 99 ~~vLDiGcG~~~~~~~~~-~-~~~v~giD~s~~~l~~~-----------~~~~~~~~~d~~~~--~~l---~~~~~s~D~ 160 (282)
..|+++|||.-....+.. + +.+++-+|. +..++.. .....++..|+..+ ..+ .+....-=+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 469999999643333322 3 479999994 6555321 11223455565321 001 122233457
Q ss_pred EEecchhhccCC--HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 161 VVCAVSVQYLQQ--PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 161 v~~~~~l~~~~~--~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++-.+++++++ ...+++.+...+.||+.++++...+
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 778889999974 3458899999889999999986544
No 318
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.73 E-value=0.12 Score=44.83 Aligned_cols=92 Identities=16% Similarity=0.143 Sum_probs=58.4
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+ | .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++ . .....+|+|+.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~-~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASK-EDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCC-chHHHHHHHHhCCCCceEEEE
Confidence 3567899999995 4 44333222 25679999999988776555443222333321 111 0 11346999998
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-.- ..++.+.+.|++||++++.
T Consensus 224 ~~g~-------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 224 SVGK-------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CCGG-------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCh-------HHHHHHHHHhccCCEEEEE
Confidence 7652 3578888999999998864
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.71 E-value=0.19 Score=43.68 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=58.9
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC----CCCCCceeEEEecch
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL----EFDHCSFDAVVCAVS 166 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l----~~~~~s~D~v~~~~~ 166 (282)
.+.++.+||-+|+| .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++ .-..+.+|+|+-+..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARD-TDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCC-cCHHHHHHHhCCCCCEEEEeCC
Confidence 45678899999996 34332222 24669999999998777665443222333321 111 001135888876542
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-...++.+.+.|+|||++++.
T Consensus 242 ------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 242 ------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ------CHHHHHHHHHHhccCCEEEEe
Confidence 245788999999999998864
No 320
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.60 E-value=0.12 Score=45.05 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=60.3
Q ss_pred hCCCCCeEEEeCCcc-cc---hhhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cCC-CC-CCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMSSW-VS---HLPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QKL-EF-DHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~-~~---~~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~l-~~-~~~s~D~v~~~~ 165 (282)
.+.++.+||-+|+|. |. .+++...+.+|+++|.+++.++.+++...-.+.+...+ +.+ .. ....+|+|+-+-
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 467889999999963 33 23333457899999999987766654432122222110 000 00 123699998765
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. -...++.+.+.|++||++++.
T Consensus 248 G------~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 248 G------AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp C------CHHHHHHHHHHEEEEEEEEEC
T ss_pred C------CHHHHHHHHHHHhcCCEEEEE
Confidence 3 245789999999999998865
No 321
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.60 E-value=0.11 Score=45.29 Aligned_cols=94 Identities=14% Similarity=0.034 Sum_probs=58.3
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-----CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-----FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-----~~~~s~D~v~~~ 164 (282)
.+.++.+||-+|+ | .|....+.. .+.+|+++|.+++.++.++....-.+.|.....++. ..++.+|+|+.+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 245 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINV 245 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence 4567889999999 3 454433322 467999999987665544332211233442111110 011269999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
... ...++.+.+.|++||++++.
T Consensus 246 ~g~------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 246 SVS------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp SSC------HHHHHHHTTSEEEEEEEEEC
T ss_pred CCc------HHHHHHHHHHHhcCCEEEEE
Confidence 542 35789999999999998754
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.31 E-value=0.12 Score=45.29 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=58.2
Q ss_pred hhCCCCCeEEEeCCcc-cch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEe
Q 023470 93 QMLRPGSEVLDLMSSW-VSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVC 163 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG~-~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~ 163 (282)
..+.++.+||=+|+|. |.. +++..+..+|+++|.+++.++.+++..--.+.+.... +.+ . .....+|+|+-
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 3467889999999973 332 2333333489999999887665554332222332110 000 1 12236999997
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-.- ...++.+.+.|+|||++++.
T Consensus 242 ~~g~------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 242 AGGD------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CSSC------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCC------hHHHHHHHHHHhcCCEEEEe
Confidence 6431 25678999999999998854
No 323
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.17 E-value=0.063 Score=46.52 Aligned_cols=92 Identities=16% Similarity=0.158 Sum_probs=57.5
Q ss_pred hCCCCCeEEEeC-Cc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEe
Q 023470 94 MLRPGSEVLDLM-SS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiG-cG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~ 163 (282)
.+.++.+||-.| +| .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++ . .....+|+|+.
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~-~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSH-EDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCCceEEEE
Confidence 356788999999 54 44433222 24569999999988776554332222333321 111 0 12346999998
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-.- ..+..+.+.|++||++++.
T Consensus 216 ~~g~-------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 216 GVGQ-------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp SSCG-------GGHHHHHTTEEEEEEEEEC
T ss_pred CCCh-------HHHHHHHHHhcCCCEEEEE
Confidence 7552 3567889999999998865
No 324
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.16 E-value=0.064 Score=46.78 Aligned_cols=92 Identities=20% Similarity=0.125 Sum_probs=54.5
Q ss_pred hCCCCCeEEEeCCc--ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS--WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG--~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|....+. ..+.+|+++|.+++.++.+++...-.+.+... .++ . .....+|+|+.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~-~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTST-APLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEE
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCc-ccHHHHHHHHhCCCCCcEEEE
Confidence 45678999999996 44433222 24569999999876655444322112223211 111 0 12346999998
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-.-. .+.+..+.|++||++++.
T Consensus 220 ~~g~~-------~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 220 SIGGP-------DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SSCHH-------HHHHHHHTEEEEEEEEEC
T ss_pred CCCCh-------hHHHHHHHhcCCCEEEEE
Confidence 75522 234455899999998864
No 325
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.09 E-value=0.2 Score=43.58 Aligned_cols=91 Identities=14% Similarity=0.016 Sum_probs=58.4
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCC-eEEEEcCCHHHHHhCCCCCceEEeecccccCCC-----CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYK-RVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-----FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~-~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-----~~~~s~D~v~~~ 164 (282)
.+ ++.+||-+|+| .|....+. ..+. +|+++|.+++.++.++.. .-.+.+... .++. .....+|+|+.+
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~-~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE-EDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT-SCHHHHHHHHHSSCEEEEEEC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc-cCHHHHHHHhcCCCCCEEEEC
Confidence 45 78899999996 34332221 1455 899999999888777665 223333321 1110 002459999876
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ...++.+.+.|++||++++.
T Consensus 239 ~g~------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 239 SGN------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCC------HHHHHHHHHHHhcCCEEEEE
Confidence 541 35678899999999998754
No 326
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.01 E-value=0.15 Score=44.91 Aligned_cols=93 Identities=19% Similarity=0.078 Sum_probs=57.6
Q ss_pred hCCCCCeEEEeC-Cc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-CCCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLM-SS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-EFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiG-cG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~~~~~s~D~v~~~~ 165 (282)
.+.++.+||-.| +| .|....+. ..+.+|+++|.+++.++.+++...-.+.+.... +.+ ......+|+|+.+-
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 467889999999 55 44433222 246699999999876655443321122232110 000 01124699999875
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. . ..++.+.++|++||++++.
T Consensus 240 g-----~--~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 240 G-----G--AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp C-----T--HHHHHHHHHEEEEEEEEEC
T ss_pred C-----H--HHHHHHHHHHhcCCEEEEE
Confidence 4 1 4788999999999998764
No 327
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.01 E-value=0.55 Score=40.75 Aligned_cols=94 Identities=12% Similarity=0.174 Sum_probs=57.7
Q ss_pred hCCCCCeEEEeCCcc-cc---hhhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSSW-VS---HLPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG~-~~---~~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||=+|+|. |. .+++...+.+|+++|.+++-++.++....-.+.+.... +.+ . .....+|.++..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~ 239 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEe
Confidence 467889999999973 22 22333468899999999987765554432223333210 000 0 112346666654
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+ -...+....+.|++||++++.
T Consensus 240 ~~------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 240 AV------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CS------CHHHHHHHHHTEEEEEEEEEC
T ss_pred cc------CcchhheeheeecCCceEEEE
Confidence 32 256788999999999998764
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.87 E-value=0.19 Score=44.38 Aligned_cols=94 Identities=12% Similarity=0.192 Sum_probs=59.6
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||=+|+| .|.. +++..+..+|+++|.+++.++.+++..--.+.+... ..++ ...++.+|+|+-
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 35678899999997 3332 233334458999999988777666554222333321 0111 112236999987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-. -...++.+.+.|++| |++++.
T Consensus 270 ~~g------~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 270 CIG------NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp CSC------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCC------CHHHHHHHHHHhhccCCEEEEE
Confidence 643 245788999999997 998764
No 329
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.81 E-value=0.22 Score=43.40 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=58.7
Q ss_pred hhCCCCCeEEEeCCc--ccchhhhhc--C-CCeEEEEcCCHHHHHhCCCCCceEEeecccccC----C-CCCC-CceeEE
Q 023470 93 QMLRPGSEVLDLMSS--WVSHLPQEV--S-YKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQK----L-EFDH-CSFDAV 161 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG--~~~~~~~~~--~-~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~----l-~~~~-~s~D~v 161 (282)
..+.++.+||-.|+| .|....+.. . +.+|+++|.+++.++.+++...-.+.+... .+ + .... +.+|+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM-QDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCceEE
Confidence 356688999999996 344332221 3 679999999987766543322112223321 11 0 1112 479999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+.+-.- ...++.+.+.|+|||++++.
T Consensus 245 i~~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 245 IDLNNS------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EESCCC------HHHHTTGGGGEEEEEEEEEC
T ss_pred EECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 977542 44678899999999998764
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.72 E-value=0.1 Score=46.02 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=57.1
Q ss_pred hCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~~ 164 (282)
.+.++.+||=+|+| .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++ . .....+|+|+-+
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLE-EDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCc-ccHHHHHHHHhCCCCceEEEEC
Confidence 35678999999996 33322221 25679999999988776554332112222210 111 0 123369999887
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. ...+..+.+.|+|||++++.
T Consensus 265 ~g-------~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 265 AG-------GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TT-------SSCHHHHHHHEEEEEEEEEE
T ss_pred CC-------hHHHHHHHHHhhcCCEEEEE
Confidence 54 13467888999999998865
No 331
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.61 E-value=0.32 Score=41.87 Aligned_cols=87 Identities=14% Similarity=0.037 Sum_probs=52.8
Q ss_pred eEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc-cCCCCCCCceeEEEecchhhccCCHH
Q 023470 100 EVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD-QKLEFDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 100 ~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~-~~l~~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
+||=.|+ | .|....+. ..+.+|+++|.|++.++.+++...-.+.+.... ....+..+.+|+|+-+-. .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g-------~ 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG-------D 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC-------H
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC-------c
Confidence 4999998 5 34332221 245699999999876665543321122232110 111123457999887543 2
Q ss_pred HHHHHHHHcccCCcEEEEE
Q 023470 175 KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 175 ~~l~~~~r~LkpgG~li~~ 193 (282)
..++.+.++|+|+|+++..
T Consensus 222 ~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 222 KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCEEEEE
Confidence 3789999999999998864
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.48 E-value=0.29 Score=43.14 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=57.5
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.+++.++.++...--.+.+... ..++ ....+.+|+|+-
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 45678899999996 3332 233333348999999987776554433222333321 0011 011236899987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-.- ...++.+.++|++| |++++.
T Consensus 269 ~~g~------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 269 CVGN------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp CSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC------HHHHHHHHHHhhcCCcEEEEE
Confidence 6431 45688999999999 998764
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.37 E-value=0.28 Score=43.19 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=57.9
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.+++.++.+++..--.+.+... +.++ ....+.+|+|+-
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 45678899999997 3332 233334448999999987766554433212223211 0011 111236999987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-.- ...++.+.+.|++| |++++.
T Consensus 268 ~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 268 CAGR------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC------HHHHHHHHHHHhcCCCEEEEE
Confidence 6431 45688999999999 998764
No 334
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.37 E-value=0.2 Score=43.90 Aligned_cols=93 Identities=10% Similarity=0.045 Sum_probs=56.7
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|+ | .|....+. ..+.+|+++|.+++.++.++....-.+.+.... ..+ . .....+|+++.+
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 3567889999995 4 45433322 256799999999877655432221123333211 000 0 112469999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ..+..+.++|++||++++.
T Consensus 239 ~G~-------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 239 IGG-------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp SCG-------GGHHHHHHHEEEEEEEEEC
T ss_pred CCc-------hHHHHHHHhccCCCEEEEE
Confidence 652 2467888999999998764
No 335
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.36 E-value=0.096 Score=45.71 Aligned_cols=93 Identities=19% Similarity=0.193 Sum_probs=57.2
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|+ | .|....+. ..+.+|+++|.+++.++.++....-.+.+.... ..+ . .....+|+|+.+
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 3567889999999 4 45433332 246799999999877655432221122343211 001 0 112469999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. . ..++.+.+.|+++|++++.
T Consensus 243 ~g-~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 243 TG-A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp SC-S------SSHHHHHHHEEEEEEEEES
T ss_pred CC-H------HHHHHHHHhhccCCEEEEE
Confidence 65 1 2468888999999998764
No 336
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.22 E-value=0.29 Score=42.70 Aligned_cols=91 Identities=15% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCCeEEEe-CCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cCC-CCCCCceeEEEecchhhc
Q 023470 97 PGSEVLDL-MSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QKL-EFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 97 ~~~~vLDi-GcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~l-~~~~~s~D~v~~~~~l~~ 169 (282)
++.+||=+ |+| .|....+. ..+.+|+++|.+++.++.+++...-.+.+...+ +.+ ....+.+|+|+.+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g--- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN--- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC---
Confidence 67899999 565 34332221 256699999999877665543321122222111 000 112346999997643
Q ss_pred cCCHHHHHHHHHHcccCCcEEEEE
Q 023470 170 LQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 170 ~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-...++.+.++|++||+++..
T Consensus 227 ---~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 ---TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEES
T ss_pred ---chHHHHHHHHHhccCCEEEEE
Confidence 355778999999999999753
No 337
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.99 E-value=0.34 Score=42.65 Aligned_cols=94 Identities=12% Similarity=0.120 Sum_probs=57.3
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.+++.++.++....-.+.+... ..++ ...++.+|+|+-
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 45678899999996 3432 233333348999999987766554333212233321 0011 111236999987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-.- ...++.+.+.|++| |++++.
T Consensus 268 ~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 268 VIGR------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CSCC------HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCC------HHHHHHHHHHhhcCCcEEEEe
Confidence 6431 45678999999999 998764
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.93 E-value=0.58 Score=41.74 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=54.3
Q ss_pred CCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEec
Q 023470 95 LRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~~ 164 (282)
+.++.+||=+|+| .|.. +++..+..+|+++|.+++.++.++....-.+.+... .++ . .....+|+|+-+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK-ENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT-SCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC-CCHHHHHHHHhCCCCCCEEEEC
Confidence 5678899999996 3332 333334449999999998776655433222223211 110 0 122369999875
Q ss_pred chhhccCCHHHHHHHHHHcc----cCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVL----KPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~L----kpgG~li~~ 193 (282)
-. .....+..+.+.| ++||++++.
T Consensus 290 ~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 290 TG-----VPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp SS-----CHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CC-----CcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 43 3333444555555 999998864
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.78 E-value=0.36 Score=42.54 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=57.3
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.+++.++.++...--.+.+... ..++ ....+.+|+|+-
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEE
Confidence 45678899999997 3332 233333348999999987766554433212233221 0011 011236899987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-.- ...++.+.+.|++| |++++.
T Consensus 272 ~~G~------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 272 CAGT------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC------HHHHHHHHHHhhcCCCEEEEE
Confidence 6431 45788999999999 998754
No 340
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.58 E-value=0.18 Score=43.59 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=56.7
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|+ | .|....+.. .+.+|+++|.+++.++.++....-.+.+.... ..+ . .....+|+++.+
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 3567889999994 4 454433322 45699999999876654432221122333211 000 0 112469999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. ...++.+.+.|++||++++.
T Consensus 217 ~g-------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 217 VG-------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp SC-------GGGHHHHHHTEEEEEEEEEC
T ss_pred Cc-------hHHHHHHHHHhcCCCEEEEE
Confidence 65 24578899999999998764
No 341
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.50 E-value=0.84 Score=39.50 Aligned_cols=94 Identities=7% Similarity=0.003 Sum_probs=59.6
Q ss_pred hhCCCCCeEEEeCCcc-cc---hhhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc------cCCCCCCCceeEEE
Q 023470 93 QMLRPGSEVLDLMSSW-VS---HLPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD------QKLEFDHCSFDAVV 162 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG~-~~---~~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~------~~l~~~~~s~D~v~ 162 (282)
..+.++.+||=.|+|. |. .+++..+...++++|.+++-++.+++...-.+.+.... ..+. ....+|+|+
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~-~~~g~d~v~ 234 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLR-ELRFNQLIL 234 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHG-GGCSSEEEE
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhc-ccCCccccc
Confidence 3466889999999973 32 23344466678999999987776665543233333210 0011 123478877
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..-. -...++.+.++|++||.+++.
T Consensus 235 d~~G------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 235 ETAG------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp ECSC------SHHHHHHHHHHCCTTCEEEEC
T ss_pred cccc------ccchhhhhhheecCCeEEEEE
Confidence 6542 256788899999999998864
No 342
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.48 E-value=0.14 Score=44.45 Aligned_cols=45 Identities=29% Similarity=0.426 Sum_probs=33.2
Q ss_pred CCCCceeEEEec--chhh------------ccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 153 FDHCSFDAVVCA--VSVQ------------YLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 153 ~~~~s~D~v~~~--~~l~------------~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+++++||+|++. +... ++......+++++|+|||||.+++.+.+.
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 457889999988 3221 22245678999999999999999986643
No 343
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.36 E-value=0.11 Score=45.65 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=55.6
Q ss_pred hhCCCCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeeccccc-CC--CCCCCceeEEEecch
Q 023470 93 QMLRPGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQ-KL--EFDHCSFDAVVCAVS 166 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~-~l--~~~~~s~D~v~~~~~ 166 (282)
..+.++.+||-+|+| .|....+. ..+.+|+++|.|++.++.++....-.+.+... . ++ .+. +.+|+|+.+-.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~-~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLE-EGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGG-TSCHHHHSC-SCEEEEEECCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcC-chHHHHHhh-cCCCEEEECCC
Confidence 356788999999996 34332221 13568999999876655443322112223211 1 11 011 46999997754
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. ....++.+.++|++||+++..
T Consensus 253 ~~----~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 253 SL----TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CS----TTCCTTTGGGGEEEEEEEEEC
T ss_pred CC----cHHHHHHHHHHhcCCCEEEEe
Confidence 20 012346778999999998754
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.26 E-value=0.21 Score=43.48 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=57.3
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeeccc--c--cCCCCCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ--D--QKLEFDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~--~--~~l~~~~~s~D~v~~~ 164 (282)
.+ ++.+||-+|+| .|.. +++.. ++.+|+++|.|++.++.+++...-.+.+... + ..+. ....+|+|+-+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~ 245 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDL 245 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEEC
Confidence 56 88999999996 3332 23332 2679999999987766554322111222211 0 1111 12369999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ...++.+.++|+|||++++.
T Consensus 246 ~g~------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 246 VGT------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCC------hHHHHHHHHHhhcCCEEEEe
Confidence 542 34788999999999998764
No 345
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.22 E-value=0.26 Score=43.08 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=57.3
Q ss_pred hCCCC--CeEEEeCC-c-ccchhhhh--cCCC-eEEEEcCCHHHHHhCCC-CCceEEeecccc---cCC-CCCCCceeEE
Q 023470 94 MLRPG--SEVLDLMS-S-WVSHLPQE--VSYK-RVVGHGLNAQELAKNPR-LEYFIVKDLNQD---QKL-EFDHCSFDAV 161 (282)
Q Consensus 94 ~~~~~--~~vLDiGc-G-~~~~~~~~--~~~~-~v~giD~s~~~l~~~~~-~~~~~~~d~~~~---~~l-~~~~~s~D~v 161 (282)
.+.++ .+||-.|+ | .|....+. ..+. +|+++|.+++.++.+++ ...-.+.+.... ..+ ....+.+|++
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEE
Confidence 46678 89999998 4 44433322 2456 99999999876544332 221123343211 000 0111269999
Q ss_pred EecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+.+-. ...++.+.++|++||++++.
T Consensus 235 i~~~G-------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 235 FDNVG-------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EESCC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred EECCC-------HHHHHHHHHHhccCcEEEEE
Confidence 98765 25788999999999998764
No 346
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.18 E-value=0.15 Score=44.78 Aligned_cols=92 Identities=14% Similarity=0.029 Sum_probs=56.8
Q ss_pred hCCCCCeEEEeC-Cc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----CCCCCceeEEEec
Q 023470 94 MLRPGSEVLDLM-SS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----EFDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiG-cG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~~~~~s~D~v~~~ 164 (282)
.+.++.+||-.| +| .|....+. ..+.+|+++|.+++.++.+++...-.+.+... .++ ....+.+|+|+.+
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRS-EDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHHSSCEEEEEES
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCc-hHHHHHHHHHhCCCceEEEEC
Confidence 356788999995 44 44433222 25679999999998776554332222333311 110 0013469999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ..+..+.+.|++||++++.
T Consensus 243 ~g~-------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 243 IGA-------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp CCG-------GGHHHHHHTEEEEEEEEEC
T ss_pred CCH-------HHHHHHHHHhccCCEEEEE
Confidence 652 2568889999999998764
No 347
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.13 E-value=0.49 Score=42.99 Aligned_cols=92 Identities=15% Similarity=0.059 Sum_probs=57.3
Q ss_pred hCCCCCeEEEeCC-c-ccchhhh--hcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-----------------
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQ--EVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE----------------- 152 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~--~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~----------------- 152 (282)
.+.++.+||=+|+ | .|....+ ...+.++++++.+++-++.++....-.+.+... .++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~-~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNA-EGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTT-TTCCSEEETTEECHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCc-CcccccccccccchHHHHHHH
Confidence 4567889999998 5 3332222 125679999999988776554332112222211 1110
Q ss_pred ------CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 153 ------FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 153 ------~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.....+|+|+-+-. ...+..+.++|++||++++.
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEE
Confidence 01246999987654 25678899999999998864
No 348
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.05 E-value=0.64 Score=40.61 Aligned_cols=91 Identities=16% Similarity=0.116 Sum_probs=55.9
Q ss_pred hCCCC------CeEEEeCCc-ccchh----h-hhcCCCeEEEEcCCHH---HHHhCCCCCceEEeecccccCC----CCC
Q 023470 94 MLRPG------SEVLDLMSS-WVSHL----P-QEVSYKRVVGHGLNAQ---ELAKNPRLEYFIVKDLNQDQKL----EFD 154 (282)
Q Consensus 94 ~~~~~------~~vLDiGcG-~~~~~----~-~~~~~~~v~giD~s~~---~l~~~~~~~~~~~~d~~~~~~l----~~~ 154 (282)
.+.++ .+||-+|+| .|... + +..+..+|+++|.+++ .++.+++...-.+ +... .++ ..
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~-~~~~~i~~~- 239 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ-TPVEDVPDV- 239 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT-SCGGGHHHH-
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc-cCHHHHHHh-
Confidence 45577 899999996 33322 2 3333334999999876 5555444332223 4321 111 01
Q ss_pred CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 155 HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+.+|+|+-+-. . ...++.+.++|++||++++.
T Consensus 240 ~gg~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 240 YEQMDFIYEATG-----F-PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp SCCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEE
Confidence 236999987643 1 34678999999999998764
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.04 E-value=0.11 Score=44.79 Aligned_cols=85 Identities=16% Similarity=0.055 Sum_probs=51.4
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCC-ceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
.++++.+||=+|+| .|.. +++. .+.+|++++ |++.++.+++.. ...+.| .+.+ .+.+|+|+-+-.-
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d---~~~v---~~g~Dvv~d~~g~- 209 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNN-AGYVVDLVS-ASLSQALAAKRGVRHLYRE---PSQV---TQKYFAIFDAVNS- 209 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEEC-SSCCHHHHHHHTEEEEESS---GGGC---CSCEEEEECC----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-cCCEEEEEE-ChhhHHHHHHcCCCEEEcC---HHHh---CCCccEEEECCCc-
Confidence 35578999999996 3332 2332 355999999 876655544332 111212 1334 4679999976542
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..+..+.++|+|||+++..
T Consensus 210 ------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 ------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ----------TTGGGEEEEEEEEEE
T ss_pred ------hhHHHHHHHhcCCCEEEEE
Confidence 1236678999999998865
No 350
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.03 E-value=0.35 Score=42.59 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=57.0
Q ss_pred hCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCC-----CCCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKL-----EFDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l-----~~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+| .|.. +++..+..+|+++|.|++.++.++....-.+.+... ..++ ....+.+|+|+-
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 45678899999996 3332 233334448999999987765544322112223211 0011 011236999987
Q ss_pred cchhhccCCHHHHHHHHHHcccCC-cEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPG-GVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~Lkpg-G~li~~ 193 (282)
+-.- ...++.+.+.|++| |++++.
T Consensus 267 ~~g~------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 267 CIGN------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCc------HHHHHHHHHhhccCCcEEEEE
Confidence 6431 45688999999999 998764
No 351
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.00 E-value=0.18 Score=43.75 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=56.7
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCC-C-CCCCceeEEEec
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKL-E-FDHCSFDAVVCA 164 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l-~-~~~~s~D~v~~~ 164 (282)
.+.++.+||-.|+ | .|....+.. .+.+|+++|.+++.++.++....-.+.+.... ..+ . .....+|+|+.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 3567889999996 3 554433322 56799999999876554432221122333211 000 0 112369999987
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.- ..++.+.++|++||+++..
T Consensus 222 ~g~-------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 222 IGK-------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp SCT-------TTHHHHHHTEEEEEEEEEC
T ss_pred CcH-------HHHHHHHHhhccCCEEEEE
Confidence 552 4578889999999998764
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.89 E-value=0.13 Score=44.78 Aligned_cols=93 Identities=22% Similarity=0.163 Sum_probs=56.2
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cCC-C-CCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QKL-E-FDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~l-~-~~~~s~D~v~~~~ 165 (282)
.+.++.+||=.|+ | .|....+. ..+.+|++++.+++.++.++....-.+.+...+ +.+ . .....+|+|+.+-
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 3567889999998 4 44333222 246799999998876655443221122232111 000 0 1223699999876
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.- ..+..+.+.|++||++++.
T Consensus 236 g~-------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 236 GG-------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp C---------CHHHHHHTEEEEEEEEEC
T ss_pred ch-------hHHHHHHHhhcCCCEEEEE
Confidence 52 2568889999999998864
No 353
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.78 E-value=0.13 Score=43.94 Aligned_cols=87 Identities=22% Similarity=0.177 Sum_probs=54.6
Q ss_pred CCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeeccc-c---cCCCCCCCceeEEEecch
Q 023470 95 LRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-D---QKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 95 ~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~---~~l~~~~~s~D~v~~~~~ 166 (282)
+.++.+||-+|+ | .|....+. ..+.+|+++|.+++.++.++....-.+.+... . ..+ +.+|+|+. ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vid-~g 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW----GGLDLVLE-VR 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEEE-CS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh----cCceEEEE-CC
Confidence 678899999998 4 44433222 24569999999876554443322112233321 0 112 46999987 43
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
- ..++.+.+.|++||+++..
T Consensus 198 ~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 198 G-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp C-------TTHHHHHTTEEEEEEEEEC
T ss_pred H-------HHHHHHHHhhccCCEEEEE
Confidence 1 3578899999999998753
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.63 E-value=0.46 Score=41.40 Aligned_cols=90 Identities=12% Similarity=0.027 Sum_probs=55.5
Q ss_pred CCCeEEEeCCc-ccchhhhh--cCCC-eEEEEcCCHHHHHhCCCCCceEEeecccccCC-----CC-CCCceeEEEecch
Q 023470 97 PGSEVLDLMSS-WVSHLPQE--VSYK-RVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----EF-DHCSFDAVVCAVS 166 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~--~~~~-~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~~-~~~s~D~v~~~~~ 166 (282)
++.+||-+|+| .|....+. ..+. +|+++|.+++.++.+++...-.+.+... .++ .. ....+|+|+.+-.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~-~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-EDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT-SCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC-cCHHHHHHHHcCCCCCCEEEECCC
Confidence 78899999996 34332222 1345 9999999987766544322112223211 111 01 1235999987654
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. ...++.+.+.|++||+++..
T Consensus 246 ~------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 246 A------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp C------HHHHHHHHHHEEEEEEEEEC
T ss_pred C------HHHHHHHHHHHhcCCEEEEE
Confidence 1 45678899999999998764
No 355
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.51 E-value=0.76 Score=34.25 Aligned_cols=96 Identities=8% Similarity=-0.051 Sum_probs=58.3
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC-CCceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR-LEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
..+|+=+||| .|..++... .+.+|+++|.+++.++..+. ......+|......+. ..-..+|+|++... +
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~-----~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP-----N 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS-----C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC-----C
Confidence 3579999998 455555443 57899999999988765433 2345566653321111 11246888887532 3
Q ss_pred HHH--HHHHHHHcccCCcEEEEEEcCch
Q 023470 173 PEK--VFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 173 ~~~--~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
... .+-...|.+.|+..++....++.
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar~~~~~ 109 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIARAHYDD 109 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEESSHH
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 332 34446677788888777665543
No 356
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=89.35 E-value=0.31 Score=42.00 Aligned_cols=93 Identities=22% Similarity=0.076 Sum_probs=53.1
Q ss_pred hCCCCC-eEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cC-CCCCCCceeEEEecc
Q 023470 94 MLRPGS-EVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QK-LEFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~-~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~-l~~~~~s~D~v~~~~ 165 (282)
.+.++. +||-+|+ | .|....+. ..+.+|++++.+++.++.++....-.+.+.... .. .....+.+|+|+-+-
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~ 224 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV 224 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECC
Confidence 355664 8999998 5 34332221 245689999998765544333221112222110 00 112234699998765
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. . ..+..+.+.|++||++++.
T Consensus 225 g-----~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 225 G-----G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp T-----T--TTHHHHHHTEEEEEEEEEC
T ss_pred c-----H--HHHHHHHHhhccCCEEEEE
Confidence 4 1 2578889999999998764
No 357
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=89.32 E-value=0.36 Score=42.12 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCCCCeEEEeCCcccchh---hhhc-CCCeEEEEcCCHHHHHhCC
Q 023470 95 LRPGSEVLDLMSSWVSHL---PQEV-SYKRVVGHGLNAQELAKNP 135 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~---~~~~-~~~~v~giD~s~~~l~~~~ 135 (282)
+.++..++|..||.|.+. +... +..+|+|+|.++.+++.++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 457889999999987543 3332 5689999999999998764
No 358
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.27 E-value=0.32 Score=43.05 Aligned_cols=93 Identities=12% Similarity=0.126 Sum_probs=57.1
Q ss_pred CCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecc---c-c--cCC-CC-CCCceeEEE
Q 023470 95 LRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLN---Q-D--QKL-EF-DHCSFDAVV 162 (282)
Q Consensus 95 ~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~---~-~--~~l-~~-~~~s~D~v~ 162 (282)
+.++.+||-+|+| .|.. +++..+..+|+++|.|++.++.+++...-.+.+.. . + +.+ .. ....+|+|+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 5678899999996 3433 23322326999999999877655543321222321 1 0 011 01 123699998
Q ss_pred ecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 163 CAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 163 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-+-.- ...++.+.++|++||+++..
T Consensus 273 d~~g~------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 273 EATGD------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp ECSSC------TTHHHHHHHHEEEEEEEEEC
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 76531 24678899999999998754
No 359
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=88.83 E-value=0.26 Score=42.46 Aligned_cols=38 Identities=13% Similarity=0.241 Sum_probs=27.1
Q ss_pred CCCCceeEEEecchhhccCCH----HHHHHHHHHcccCCcEEE
Q 023470 153 FDHCSFDAVVCAVSVQYLQQP----EKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~~~----~~~l~~~~r~LkpgG~li 191 (282)
+.+..+|+++.-. +.--.+| +.+++.++++++|||.+.
T Consensus 182 l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 182 VENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp CCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred hcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 3445799998753 2222233 469999999999999876
No 360
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.53 E-value=0.67 Score=40.70 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=54.2
Q ss_pred hCC-CCCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCC-CCCceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 94 MLR-PGSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNP-RLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 94 ~~~-~~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~-~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
.+. ++.+||=+|+| .|....+. ..+.+|+++|.+++.++.+. ....-.+.+......+.-..+.+|+|+.+-...
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcH
Confidence 455 78899999996 34332222 24569999999987655433 222112223221111100013699999775422
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..++.+.+.|++||+++..
T Consensus 263 ------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 263 ------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp ------CCSHHHHHHEEEEEEEEEC
T ss_pred ------HHHHHHHHHHhcCCEEEEE
Confidence 1246778899999998754
No 361
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.09 E-value=0.43 Score=41.78 Aligned_cols=92 Identities=18% Similarity=0.087 Sum_probs=53.5
Q ss_pred hCC-CCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCC-CCCceEEeecccccCC-CCCCCceeEEEecch
Q 023470 94 MLR-PGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNP-RLEYFIVKDLNQDQKL-EFDHCSFDAVVCAVS 166 (282)
Q Consensus 94 ~~~-~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~-~~~~~~~~d~~~~~~l-~~~~~s~D~v~~~~~ 166 (282)
.+. ++.+||=+|+| .|.. +++. .+.+|+++|.+++.++.++ ....-.+.+......+ .. .+.+|+|+-+-.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~-~~g~D~vid~~g 253 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSEL-ADSLDYVIDTVP 253 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHS-TTTEEEEEECCC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHh-cCCCCEEEECCC
Confidence 456 78899999996 3332 2222 3569999999876654433 2221112222110011 11 135999987654
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-. ..++.+.++|+|||+++..
T Consensus 254 ~~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 254 VH------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp SC------CCSHHHHTTEEEEEEEEEC
T ss_pred Ch------HHHHHHHHHhccCCEEEEe
Confidence 21 1346778899999998764
No 362
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.09 E-value=0.67 Score=41.85 Aligned_cols=92 Identities=18% Similarity=0.016 Sum_probs=56.6
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-----------------
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE----------------- 152 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~----------------- 152 (282)
.+.++.+||=.|+ | .|....+. ..+.++++++.+++.++.++....-.+.+... .++.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeccc-ccccccccccccccchhhhHH
Confidence 4567899999998 5 34332222 25679999999988776554332111222110 1110
Q ss_pred ------CCCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 153 ------FDHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 153 ------~~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.....+|+|+.+-.- ..++...+.|++||++++.
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEE
Confidence 002458999886552 3678888999999998864
No 363
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.84 E-value=1 Score=38.57 Aligned_cols=92 Identities=17% Similarity=0.057 Sum_probs=53.2
Q ss_pred hhCCCCCeEEEeC-Cc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccC-CCCCCCceeEEEecchh
Q 023470 93 QMLRPGSEVLDLM-SS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQK-LEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 93 ~~~~~~~~vLDiG-cG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~-l~~~~~s~D~v~~~~~l 167 (282)
..+.++.+||=+| +| .|....+. ..+.+|++++ +++.++.+++..--.+.+... .+ +.-.-..+|+|+-+-.
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~g~D~v~d~~g- 224 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHE-EDFLLAISTPVDAVIDLVG- 224 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTT-SCHHHHCCSCEEEEEESSC-
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCC-cchhhhhccCCCEEEECCC-
Confidence 3567889999997 76 34322221 2466999997 444455444322112233311 11 1111146999987654
Q ss_pred hccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 168 QYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 168 ~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
...+..+.++|++||+++..
T Consensus 225 ------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 225 ------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp ------HHHHHHHGGGEEEEEEEEEC
T ss_pred ------cHHHHHHHHhccCCCEEEEe
Confidence 22348899999999998865
No 364
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.77 E-value=2 Score=32.39 Aligned_cols=99 Identities=12% Similarity=0.008 Sum_probs=55.1
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCC-CCC-ceEEeecccccCCC-CCCCceeEEEecchhhcc
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNP-RLE-YFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~-~~~-~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~ 170 (282)
++.+|+=+||| .|..++... .+.+|+++|.+++.++..+ ... .....+......+. ..-..+|+|+.+..-.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~-- 95 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD-- 95 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH--
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc--
Confidence 56789999998 455444332 5679999999988776655 332 23334432111111 1123588888764311
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEEcCch
Q 023470 171 QQPEKVFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 171 ~~~~~~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
.....+..+.+.+.+...++....++.
T Consensus 96 -~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 96 -STNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp -HHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred -HHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 112244445555566666666654443
No 365
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.74 E-value=0.32 Score=42.00 Aligned_cols=93 Identities=19% Similarity=0.085 Sum_probs=53.7
Q ss_pred hCCCCC-eEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeeccc--ccC-CCCCCCceeEEEecc
Q 023470 94 MLRPGS-EVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ--DQK-LEFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~-~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~--~~~-l~~~~~s~D~v~~~~ 165 (282)
.+.++. +||=.|+ | .|....+. ..+.+|++++.+++.++.+++...-.+.+... ... .....+.+|+|+.+-
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~ 225 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV 225 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC
Confidence 355664 8999998 5 34332221 13568999999865544333221111222211 011 112234699998765
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
. . ..+..+.+.|++||++++.
T Consensus 226 g-----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 226 G-----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp C-----T--HHHHHHHTTEEEEEEEEEC
T ss_pred c-----H--HHHHHHHHhhcCCCEEEEE
Confidence 4 2 3688999999999998764
No 366
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=87.47 E-value=2.3 Score=36.99 Aligned_cols=96 Identities=10% Similarity=0.065 Sum_probs=57.5
Q ss_pred CCCeEEEeCCcccchhhhh---cCCCeEEEEcCCHHHHHh-------C----------------------CCCCceEEee
Q 023470 97 PGSEVLDLMSSWVSHLPQE---VSYKRVVGHGLNAQELAK-------N----------------------PRLEYFIVKD 144 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~---~~~~~v~giD~s~~~l~~-------~----------------------~~~~~~~~~d 144 (282)
+...|+.+|||......+. .+...++-+|. ++.++. . .....++-.|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 5678999999965433222 24677888888 544421 1 1122344556
Q ss_pred cccc-------cCCCCCCCceeEEEecchhhccC--CHHHHHHHHHHcccCCcEEE-EEEc
Q 023470 145 LNQD-------QKLEFDHCSFDAVVCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFI-VSFS 195 (282)
Q Consensus 145 ~~~~-------~~l~~~~~s~D~v~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li-~~~~ 195 (282)
+... ...+ ..+...++++-.++.+++ ....+++.+.+.+ |+|.++ ++..
T Consensus 176 L~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 176 LNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp TTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 5331 1122 334578899999999996 3334788888776 677764 5543
No 367
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.03 E-value=0.51 Score=41.60 Aligned_cols=92 Identities=18% Similarity=0.095 Sum_probs=53.1
Q ss_pred CCCCCeEEEeC-Cc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccc---cCCCCCCCceeEEEecchh
Q 023470 95 LRPGSEVLDLM-SS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD---QKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 95 ~~~~~~vLDiG-cG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~---~~l~~~~~s~D~v~~~~~l 167 (282)
+.++.+||=.| +| .|....+. ..+.+|++++ +++.++.+++...-.+.+.... +.+. ....+|+|+-+-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~g~D~vid~~g- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLK-SLKPFDFILDNVG- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHH-TSCCBSEEEESSC-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHh-hcCCCCEEEECCC-
Confidence 56788999999 55 34332221 2457999998 6555544433321122333210 0111 1145899987644
Q ss_pred hccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 168 QYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 168 ~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.....+....++|++||+++..
T Consensus 258 ----~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 258 ----GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ----TTHHHHGGGGBCSSSCCEEEES
T ss_pred ----ChhhhhHHHHHhhcCCcEEEEe
Confidence 2224567788999999998764
No 368
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.47 E-value=0.64 Score=40.68 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=56.8
Q ss_pred hhCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCC-ceEEeeccc----c--cCC-C-CCCCcee
Q 023470 93 QMLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQ----D--QKL-E-FDHCSFD 159 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~----~--~~l-~-~~~~s~D 159 (282)
..+.++.+||=+|+| .|.. +++..+...|+++|.+++.++.++... ......... + +.+ . .....+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCC
Confidence 356788899999996 3332 333334445999999997765544321 111111100 0 001 0 1234699
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+|+-+-. -...++.+.++|++||++++.
T Consensus 255 vvid~~g------~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 255 VALECTG------VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEEECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC------ChHHHHHHHHHhcCCCEEEEE
Confidence 9987653 245678999999999998864
No 369
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=86.00 E-value=1.3 Score=38.84 Aligned_cols=53 Identities=8% Similarity=-0.102 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHHhhCC----CCCeEEEeCCcccchhhhhc---CCCeEEEEcCCHHHHH
Q 023470 80 DGGFISTLTNLYRQMLR----PGSEVLDLMSSWVSHLPQEV---SYKRVVGHGLNAQELA 132 (282)
Q Consensus 80 ~~~~~~~~~~~~~~~~~----~~~~vLDiGcG~~~~~~~~~---~~~~v~giD~s~~~l~ 132 (282)
+....+.+.+.+.-.-. ++..|||||.|.|....... ...+|+++++++..+.
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~ 96 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK 96 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH
Confidence 44666666666532111 35789999999886544433 3568999999998663
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.54 E-value=1.5 Score=34.12 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=54.8
Q ss_pred CCeEEEeCCc-ccchhhhhc--C-CCeEEEEcCCHHHHHhCCCC-CceEEeecccccCC-CC-CCCceeEEEecchhhcc
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--S-YKRVVGHGLNAQELAKNPRL-EYFIVKDLNQDQKL-EF-DHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~-~~~v~giD~s~~~l~~~~~~-~~~~~~d~~~~~~l-~~-~~~s~D~v~~~~~l~~~ 170 (282)
+.+|+=+||| .|..++... . +.+|+++|.+++.++..+.. .....+|......+ .. .-..+|+|+....
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~---- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP---- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS----
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC----
Confidence 5679999998 455444432 4 67999999999876543322 23445555321111 11 1245888887532
Q ss_pred CCHHH--HHHHHHHcccCCcEEEEEEcCc
Q 023470 171 QQPEK--VFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 171 ~~~~~--~l~~~~r~LkpgG~li~~~~~~ 197 (282)
+... .+-...+.+.|++.++....++
T Consensus 115 -~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 142 (183)
T 3c85_A 115 -HHQGNQTALEQLQRRNYKGQIAAIAEYP 142 (183)
T ss_dssp -SHHHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred -ChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 2222 3334566667777887765544
No 371
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=85.48 E-value=0.52 Score=39.50 Aligned_cols=40 Identities=8% Similarity=0.101 Sum_probs=28.0
Q ss_pred CCCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEEEc
Q 023470 154 DHCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 154 ~~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 195 (282)
+..++|+|..-.- +-..-...++.+...|+|||.+++..-
T Consensus 179 ~~~~~dlv~ID~D--~Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 179 PQTVIALAYFDLD--LYEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred CCCceEEEEEcCc--ccchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3456888877652 111234578899999999999998743
No 372
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.32 E-value=0.48 Score=41.03 Aligned_cols=43 Identities=23% Similarity=0.369 Sum_probs=30.3
Q ss_pred CCCceeEEEec--chhh---------ccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 154 DHCSFDAVVCA--VSVQ---------YLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 154 ~~~s~D~v~~~--~~l~---------~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
++++||+|++. +... ++......+.++.|+|||||.+++....
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 45678888876 2211 2223456889999999999999998654
No 373
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=85.24 E-value=0.84 Score=39.49 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=33.6
Q ss_pred HHhhCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCHHHHHhCC
Q 023470 91 YRQMLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNAQELAKNP 135 (282)
Q Consensus 91 ~~~~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~~~l~~~~ 135 (282)
+.....++..|||.-||.|..+... .-+.+.+|+|+++...+.++
T Consensus 246 i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 246 IRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASA 291 (323)
T ss_dssp HHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHH
Confidence 3444568899999999987654333 35789999999998876544
No 374
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=84.00 E-value=0.44 Score=41.94 Aligned_cols=69 Identities=19% Similarity=0.071 Sum_probs=45.0
Q ss_pred CCCeEEEeCCc-ccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecc
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~ 165 (282)
+.++||=+||| .|...+... ...+|+..|.+.+.+++.+........|+.+...+.-.-..+|+|++.-
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 46789999998 455444332 5678999999999888877766656666533222211113579988873
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=83.43 E-value=1.9 Score=31.77 Aligned_cols=95 Identities=17% Similarity=0.072 Sum_probs=54.5
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC-CCceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR-LEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
..+|+=+||| .|..++... .+.+|+++|.+++.++..+. ...+..+|......+. ..-..+|+|+.... +
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-----~ 80 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-----D 80 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS-----C
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC-----C
Confidence 3579999998 455554433 57899999999987754332 2345566664321111 12245788887543 3
Q ss_pred HHH--HHHHHHHcccCCcEEEEEEcCch
Q 023470 173 PEK--VFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 173 ~~~--~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
.+. .+....+-+. .+.++....++.
T Consensus 81 ~~~n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 81 DEFNLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp HHHHHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred HHHHHHHHHHHHHhC-CceEEEEEcChh
Confidence 322 3444445555 566666555443
No 376
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.41 E-value=1 Score=39.16 Aligned_cols=89 Identities=19% Similarity=0.096 Sum_probs=55.1
Q ss_pred hCCCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC------CCCCceeEEEe
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE------FDHCSFDAVVC 163 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~------~~~~s~D~v~~ 163 (282)
.+.++.+||-+|+ | .|....+. ..+.+|+++ .+++.++.++....-. .+.. .++. .....+|+|+-
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~~~--~~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-IDAS--REPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EETT--SCHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-eccC--CCHHHHHHHHhcCCCceEEEE
Confidence 3557889999995 4 44333222 256799999 8887766554332111 2211 1110 12246999987
Q ss_pred cchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 164 AVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 164 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-. ...+..+.+.|++||+++..
T Consensus 223 ~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 223 TLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SSC-------THHHHHHHHHEEEEEEEEES
T ss_pred CCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 654 24678899999999998864
No 377
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.68 E-value=2.4 Score=38.02 Aligned_cols=97 Identities=12% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC-CCceEEeecccccCCC-CCCCceeEEEecchhhccC
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR-LEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~ 171 (282)
.+.+|+=+||| .|..++... .+..|+++|.+++.++..+. ....+.+|......|. ..-...|+|++..-
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~----- 77 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID----- 77 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC-----
Confidence 34679999998 455554433 57899999999998865443 2345677764432121 12245788877542
Q ss_pred CHHH--HHHHHHHcccCCcEEEEEEcCch
Q 023470 172 QPEK--VFAEVFRVLKPGGVFIVSFSNRM 198 (282)
Q Consensus 172 ~~~~--~l~~~~r~LkpgG~li~~~~~~~ 198 (282)
+.+. .+....|-+.|...++.-..++.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 4443 55667777889888887765543
No 378
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.16 E-value=2.8 Score=35.97 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=51.3
Q ss_pred CeEEEeCCc-ccchhhhhc--CCC--eEEEEcCCHHHHHhCCCCCc--eEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYK--RVVGHGLNAQELAKNPRLEY--FIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~--~v~giD~s~~~l~~~~~~~~--~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
.+|.=||+| .|..++... .+. +|+++|.+++.++.+..... ....+. .++ .-...|+|+.+--..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~---~~~--~~~~aDvVilavp~~--- 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---AKV--EDFSPDFVMLSSPVR--- 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT---TGG--GGGCCSEEEECSCGG---
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH---HHH--hhccCCEEEEeCCHH---
Confidence 578999998 454443322 444 89999999987765433221 111222 110 113478888764333
Q ss_pred CHHHHHHHHHHcccCCcEEE
Q 023470 172 QPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li 191 (282)
....+++++...|+||..++
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHhhccCCCcEEE
Confidence 23668889988899887554
No 379
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=81.08 E-value=1.9 Score=37.71 Aligned_cols=88 Identities=15% Similarity=0.042 Sum_probs=52.1
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCH---HHHHhCCCCCceEEeecccc--cCCCCCCCceeEEEecchhhc
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNA---QELAKNPRLEYFIVKDLNQD--QKLEFDHCSFDAVVCAVSVQY 169 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~---~~l~~~~~~~~~~~~d~~~~--~~l~~~~~s~D~v~~~~~l~~ 169 (282)
+.+||-+|+| .|....+.. .+.+|+++|.++ +.++.++....-.+ + ..+ +.+.-..+.+|+|+.+-..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~~~~~~~~~~~~~~d~vid~~g~-- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY-N-SSNGYDKLKDSVGKFDVIIDATGA-- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE-E-CTTCSHHHHHHHCCEEEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee-c-hHHHHHHHHHhCCCCCEEEECCCC--
Confidence 8899999995 343332221 345999999987 55544432221122 3 210 0000001469999887542
Q ss_pred cCCHHHHH-HHHHHcccCCcEEEEE
Q 023470 170 LQQPEKVF-AEVFRVLKPGGVFIVS 193 (282)
Q Consensus 170 ~~~~~~~l-~~~~r~LkpgG~li~~ 193 (282)
...+ +.+.+.|++||++++.
T Consensus 257 ----~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 257 ----DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp ----CTHHHHHHGGGEEEEEEEEEC
T ss_pred ----hHHHHHHHHHHHhcCCEEEEE
Confidence 1245 8899999999998764
No 380
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.90 E-value=0.93 Score=33.95 Aligned_cols=43 Identities=19% Similarity=0.391 Sum_probs=32.8
Q ss_pred CCCCCCCceeEEEecchhh--ccCCHHHHHHHHHHcccCCcEEEE
Q 023470 150 KLEFDHCSFDAVVCAVSVQ--YLQQPEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 150 ~l~~~~~s~D~v~~~~~l~--~~~~~~~~l~~~~r~LkpgG~li~ 192 (282)
...+++++||.|+...--. +..-+..++..++..|||||.|..
T Consensus 52 ~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 3456789999998874322 233348899999999999999986
No 381
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=79.78 E-value=0.32 Score=43.01 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=50.0
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC-CCceEEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR-LEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
++.+|+=+|+| .|...+... .+.+|+++|.+++.++.... .......+.....++.-.-..+|+|+.+-.......
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 35789999997 444333322 46699999999876543321 111122222110111100135799987654322111
Q ss_pred HHHHHHHHHHcccCCcEEEE
Q 023470 173 PEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~ 192 (282)
+.-+.+++.+.+|+||.++.
T Consensus 245 ~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEE
T ss_pred chhHHHHHHHhhcCCCEEEE
Confidence 11135677888999998764
No 382
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=79.52 E-value=4.1 Score=29.51 Aligned_cols=95 Identities=12% Similarity=0.007 Sum_probs=50.9
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC--CCceEEeecccccCCC-CCCCceeEEEecchhhccC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR--LEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~--~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~ 171 (282)
+++|+=+||| .|..++... .+.+|+++|.+++.++.... ......++......+. ..-..+|+|+.+---.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--- 80 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--- 80 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc---
Confidence 4678999998 354444332 56799999999876643321 2223444442111111 1123578888873211
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.....+..+.+.+.++ .+++...+
T Consensus 81 ~~~~~~~~~~~~~~~~-~ii~~~~~ 104 (140)
T 1lss_A 81 EVNLMSSLLAKSYGIN-KTIARISE 104 (140)
T ss_dssp HHHHHHHHHHHHTTCC-CEEEECSS
T ss_pred hHHHHHHHHHHHcCCC-EEEEEecC
Confidence 1123455566667775 55554433
No 383
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.07 E-value=1.5 Score=38.48 Aligned_cols=89 Identities=9% Similarity=0.036 Sum_probs=49.7
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
..++|.=||+| .|..++..+ .+.+|++.|.+++.++......-....+. .++--.....|+|+.+---. ..
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~---~e~~~~a~~~DvVi~~vp~~---~v 94 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSI---EEFCAKLVKPRVVWLMVPAA---VV 94 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSH---HHHHHHSCSSCEEEECSCGG---GH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCH---HHHHhcCCCCCEEEEeCCHH---HH
Confidence 35689999998 455444332 56899999999887654332211111111 11100012248887764322 34
Q ss_pred HHHHHHHHHcccCCcEEE
Q 023470 174 EKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li 191 (282)
+.++.++...|++|..++
T Consensus 95 ~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 95 DSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp HHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHhhCCCCCEEE
Confidence 667788888888765544
No 384
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=78.92 E-value=0.93 Score=39.39 Aligned_cols=89 Identities=11% Similarity=0.016 Sum_probs=50.2
Q ss_pred CC-CeEEEe-CCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-----C-CCCceeEEEecc
Q 023470 97 PG-SEVLDL-MSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-----F-DHCSFDAVVCAV 165 (282)
Q Consensus 97 ~~-~~vLDi-GcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-----~-~~~s~D~v~~~~ 165 (282)
++ .+||=. |+| .|....+. ..+.+|+++|.+++.++.++....-.+.+... .++. . ....+|+|+-+-
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~-~~~~~~v~~~~~~~g~D~vid~~ 241 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKA-PDFEATLREVMKAEQPRIFLDAV 241 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTS-TTHHHHHHHHHHHHCCCEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCc-HHHHHHHHHHhcCCCCcEEEECC
Confidence 44 456544 665 34332221 13569999999987665544332222333311 1110 0 013589998875
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.- ..+..+.+.|++||++++.
T Consensus 242 g~-------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 242 TG-------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CH-------HHHHHHHHHSCTTCEEEEC
T ss_pred CC-------hhHHHHHhhhcCCCEEEEE
Confidence 52 2347788999999998864
No 385
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.69 E-value=1 Score=37.51 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=18.4
Q ss_pred HHHHHHHHHcccCCcEEEEEE
Q 023470 174 EKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~~~ 194 (282)
...+.++.|+|||||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 558889999999999999885
No 386
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.60 E-value=4.3 Score=33.75 Aligned_cols=84 Identities=11% Similarity=0.067 Sum_probs=49.1
Q ss_pred eEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCC--ceEEeecccccCCCCCCCceeEEEecchhhccCCHH
Q 023470 100 EVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLE--YFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~--~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
+|.=|||| +|..++... .+.+|+++|.+++.++...... .....+. .+. ...|+|+.+---. ...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~----~~~D~vi~av~~~---~~~ 71 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDL---SLL----QTAKIIFLCTPIQ---LIL 71 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCG---GGG----TTCSEEEECSCHH---HHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCH---HHh----CCCCEEEEECCHH---HHH
Confidence 57779998 454444322 4569999999987665432211 1111122 222 3578888864332 235
Q ss_pred HHHHHHHHcccCCcEEEEEE
Q 023470 175 KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 175 ~~l~~~~r~LkpgG~li~~~ 194 (282)
.+++++...++||..+ +++
T Consensus 72 ~~~~~l~~~~~~~~~v-v~~ 90 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIV-TDV 90 (279)
T ss_dssp HHHHHHGGGSCTTCEE-EEC
T ss_pred HHHHHHHhhCCCCCEE-EEC
Confidence 5778888888887654 554
No 387
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.83 E-value=2.6 Score=38.79 Aligned_cols=87 Identities=16% Similarity=0.056 Sum_probs=52.4
Q ss_pred CCCCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 95 LRPGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 95 ~~~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
..++.+|+=+|+| .|..+++.. -+.+|+++|+++..++.+.... +...++ .++ + ...|+|+..-.-.++-
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-a~~~~l---~e~-l--~~aDvVi~atgt~~~i 343 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-FDVVTV---EEA-I--GDADIVVTATGNKDII 343 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CEECCH---HHH-G--GGCSEEEECSSSSCSB
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CEEecH---HHH-H--hCCCEEEECCCCHHHH
Confidence 4578899999998 344433322 4579999999987654433222 112222 111 1 3579998864333321
Q ss_pred CHHHHHHHHHHcccCCcEEEEE
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+ .+..+.+||||+++..
T Consensus 344 ~-----~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 344 M-----LEHIKAMKDHAILGNI 360 (494)
T ss_dssp C-----HHHHHHSCTTCEEEEC
T ss_pred H-----HHHHHhcCCCcEEEEe
Confidence 1 3566779999998754
No 388
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=76.12 E-value=0.37 Score=42.73 Aligned_cols=96 Identities=18% Similarity=0.103 Sum_probs=50.2
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCC-C-CceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPR-L-EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~-~-~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
++.+|+=+|+| .|...+... -+.+|+++|.+++.++.+.. . .......... .++.-.-..+|+|+.+-......
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHHcCCCEEEECCCcCCCC
Confidence 46789999997 344333322 45699999999876543321 1 1111111000 11110012579998754222111
Q ss_pred CHHHHHHHHHHcccCCcEEEEE
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+.-+.+++.+.+||||.++..
T Consensus 246 t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 246 APKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CCCCBCHHHHTTSCTTCEEEEG
T ss_pred CcceecHHHHhcCCCCcEEEEE
Confidence 1111246777889999987643
No 389
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=75.50 E-value=3.7 Score=35.90 Aligned_cols=90 Identities=11% Similarity=0.050 Sum_probs=53.5
Q ss_pred CCCCeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----CCCCCceeEEEecch
Q 023470 96 RPGSEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----EFDHCSFDAVVCAVS 166 (282)
Q Consensus 96 ~~~~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~~~~~s~D~v~~~~~ 166 (282)
.++.+||=+|+ | .|....+. ..+.+|+++. |++-++.++....-.+.+... .++ ...++.+|+|+-+-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~-~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRA-PNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTS-TTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCC-chHHHHHHHHccCCccEEEECCC
Confidence 67889999999 4 34332221 2566899885 776665555443222333321 111 111244999987643
Q ss_pred hhccCCHHHHHHHHHHcc-cCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVL-KPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~L-kpgG~li~~ 193 (282)
-...++.+.+.| ++||+++..
T Consensus 241 ------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 ------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp ------SHHHHHHHHHHSCTTCEEEEES
T ss_pred ------chHHHHHHHHHhhcCCCEEEEE
Confidence 145678888888 699998764
No 390
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=75.49 E-value=2.7 Score=36.26 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=33.6
Q ss_pred HHHHhhCCCCCeEEEeCCcccchhhhh-cCCCeEEEEcCCH---HHHHhCC
Q 023470 89 NLYRQMLRPGSEVLDLMSSWVSHLPQE-VSYKRVVGHGLNA---QELAKNP 135 (282)
Q Consensus 89 ~~~~~~~~~~~~vLDiGcG~~~~~~~~-~~~~~v~giD~s~---~~l~~~~ 135 (282)
.++.....++..|||.-||.|..+... .-+.+.+|+|+++ ..++.++
T Consensus 234 ~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 234 RLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHH
Confidence 334444568899999999877654333 3468999999999 7765543
No 391
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.02 E-value=1.8 Score=37.58 Aligned_cols=91 Identities=22% Similarity=0.175 Sum_probs=48.1
Q ss_pred hCCCCCeEEEeCC-c-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cCC-CCCCCceeEEEecc
Q 023470 94 MLRPGSEVLDLMS-S-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QKL-EFDHCSFDAVVCAV 165 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~l-~~~~~s~D~v~~~~ 165 (282)
.+.++.+||=.|+ | .|.. +++...+.+|++++ +++..+.++ ...-.+.+...+ ..+ ....+.+|+|+-+-
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~ 216 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRISAEGVDIVLDCL 216 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcCCCceEEEECC
Confidence 3567899999999 5 3333 23333467999998 544333333 211112221111 000 11235699999764
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.- ..+..+.++|++||++++.
T Consensus 217 g~-------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 217 CG-------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp C--------------CTTEEEEEEEEEE
T ss_pred Cc-------hhHHHHHHHhhcCCEEEEE
Confidence 31 2237788999999999864
No 392
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=74.70 E-value=5.5 Score=39.76 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHH---HHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 95 LRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQE---LAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 95 ~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~---l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
...+.++||+|.|--.+..... +...|+.+|+-+-+ ...+.. ..|.+.|...+ .+ .....+|+|+|.++|-.-
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~-T~f~~~DyL~~-~~-~~~~~~D~vt~i~SLGAA 895 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNVR-TTFLELDYLSD-GW-ITGVRGDIVTCMLSLGAA 895 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSSC-EEEEESCTTSS-SC-GGGCCCSEEEECSCHHHH
T ss_pred ecccceEEEccCCCcceeeeecCCCCceEEecccCchhhhcccccc-ceeeEcccccc-ce-eecCCCcEEEEEeechhh
Confidence 4467889999999655555555 57899999987632 122222 46777776431 11 223569999999887644
Q ss_pred -----CCHHHHHHHHHHcccCCcE--EEEEE
Q 023470 171 -----QQPEKVFAEVFRVLKPGGV--FIVSF 194 (282)
Q Consensus 171 -----~~~~~~l~~~~r~LkpgG~--li~~~ 194 (282)
-+..+.++.+.+.+++.|. +++.+
T Consensus 896 ~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQl 926 (1289)
T 1ej6_A 896 AAGKSMTFDAAFQQLIKVLSKSTANVVLVQV 926 (1289)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred hhccCCcHHHHHHHHHHHHHhcCccEEEEEe
Confidence 3778899999999888775 55553
No 393
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=73.67 E-value=3.7 Score=36.64 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=26.8
Q ss_pred CCCCeEEEeCCcccchh---h-hhcC-CCeEEEEcCCHHHHH
Q 023470 96 RPGSEVLDLMSSWVSHL---P-QEVS-YKRVVGHGLNAQELA 132 (282)
Q Consensus 96 ~~~~~vLDiGcG~~~~~---~-~~~~-~~~v~giD~s~~~l~ 132 (282)
+++..|+|+||+.|.+. + ...+ ..+|+++++++...+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~ 266 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQ 266 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHH
Confidence 57789999999766542 2 2223 379999999997653
No 394
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=73.48 E-value=10 Score=27.41 Aligned_cols=97 Identities=11% Similarity=0.166 Sum_probs=53.0
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCC-ceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
..+|+=+||| .|..++... .+.+|+++|.+++.++..+... ....+|....+.+. ..-..+|+|+.+..-.. +
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~--~ 83 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI--Q 83 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH--H
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch--H
Confidence 4569999997 455444332 4678999999988776554332 33444542211111 11246898887643210 1
Q ss_pred HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
....+....+.+.+. .++....++
T Consensus 84 ~~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 ASTLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HHHHHHHHHHHTTCS-EEEEECCSH
T ss_pred HHHHHHHHHHHcCCC-eEEEEeCCH
Confidence 122444555556675 666554443
No 395
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=73.09 E-value=7.8 Score=32.50 Aligned_cols=93 Identities=10% Similarity=0.063 Sum_probs=50.9
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEee--------cc--cccCCCCCCCceeEEEecc
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKD--------LN--QDQKLEFDHCSFDAVVCAV 165 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d--------~~--~~~~l~~~~~s~D~v~~~~ 165 (282)
++|.=||+| .|..++... .+.+|+.+|.+++.++..+... ..... +. ...++.-.-..+|+|+.+-
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNG-LIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHC-EEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCC-EEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 478899998 455444332 5679999999987654322111 11111 10 0011110012578888865
Q ss_pred hhhccCCHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 166 SVQYLQQPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 166 ~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
--.. ...+++++...|+|+..+ +++.+
T Consensus 83 ~~~~---~~~v~~~l~~~l~~~~~i-v~~~~ 109 (316)
T 2ew2_A 83 KAQQ---LDAMFKAIQPMITEKTYV-LCLLN 109 (316)
T ss_dssp CHHH---HHHHHHHHGGGCCTTCEE-EECCS
T ss_pred cccc---HHHHHHHHHHhcCCCCEE-EEecC
Confidence 4222 366788888888877654 44433
No 396
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=72.86 E-value=6 Score=33.07 Aligned_cols=86 Identities=15% Similarity=0.178 Sum_probs=49.9
Q ss_pred CeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCHH
Q 023470 99 SEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 99 ~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
++|.=||| | .|..++... .+.+|+++|.+++.++...... ....+. .+. -...|+|+.+---.. ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-~~~~~~---~~~---~~~aDvVi~av~~~~---~~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-IPLTDG---DGW---IDEADVVVLALPDNI---IE 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-CCCCCS---SGG---GGTCSEEEECSCHHH---HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-CCcCCH---HHH---hcCCCEEEEcCCchH---HH
Confidence 47899999 9 455444332 4579999999987654332211 111111 111 134788887654333 35
Q ss_pred HHHHHHHHcccCCcEEEEEEc
Q 023470 175 KVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 175 ~~l~~~~r~LkpgG~li~~~~ 195 (282)
.+++++...++||. ++++..
T Consensus 82 ~v~~~l~~~l~~~~-ivv~~s 101 (286)
T 3c24_A 82 KVAEDIVPRVRPGT-IVLILD 101 (286)
T ss_dssp HHHHHHGGGSCTTC-EEEESC
T ss_pred HHHHHHHHhCCCCC-EEEECC
Confidence 67778877788765 444433
No 397
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=72.65 E-value=4.8 Score=34.06 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=62.1
Q ss_pred HHHHHHHhhCCCCCeEEEeCCcccchhhhhc-CCCeEEEEcCCHHHHHhCCCCC------ceEEeecccc-cCCCCCCCc
Q 023470 86 TLTNLYRQMLRPGSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQELAKNPRLE------YFIVKDLNQD-QKLEFDHCS 157 (282)
Q Consensus 86 ~~~~~~~~~~~~~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~------~~~~~d~~~~-~~l~~~~~s 157 (282)
.+.+.+... .+..+||+=+|+|....... ++.+++.+|.+++.++.-+++. .+...|.... ..+.-+...
T Consensus 82 ~yf~~l~~~--n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~ 159 (283)
T 2oo3_A 82 EYISVIKQI--NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEK 159 (283)
T ss_dssp HHHHHHHHH--SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTS
T ss_pred HHHHHHHHh--cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCC
Confidence 444455543 45568999888776544443 5679999999998775433222 2223332110 111122356
Q ss_pred eeEEEecchhhccCCHHHHHHHHHH--cccCCcEEEEEEc
Q 023470 158 FDAVVCAVSVQYLQQPEKVFAEVFR--VLKPGGVFIVSFS 195 (282)
Q Consensus 158 ~D~v~~~~~l~~~~~~~~~l~~~~r--~LkpgG~li~~~~ 195 (282)
||+|++-=-.+.-.+.+++++.+.+ .+.|+|.+++=+|
T Consensus 160 fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 160 RGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp CEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 9999996322222244555555554 4568999888655
No 398
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=71.43 E-value=6.4 Score=34.16 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=54.7
Q ss_pred hhCCCCCeEEEeCCc-ccch---hhhhcCCCeEEEEcCCHHHHHhCCCCCceEEeecccc--cCC-CCC-CCceeEEEec
Q 023470 93 QMLRPGSEVLDLMSS-WVSH---LPQEVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQD--QKL-EFD-HCSFDAVVCA 164 (282)
Q Consensus 93 ~~~~~~~~vLDiGcG-~~~~---~~~~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~--~~l-~~~-~~s~D~v~~~ 164 (282)
..+.++.+||=+|+| .|.. +++...+.+|+++|.|++-++.+++...-.+.+.... +.+ ... ...+|+|+-+
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~ 261 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDF 261 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEEC
Confidence 356788999999996 3332 3333326799999999877665544332222333210 000 111 2369999876
Q ss_pred chhhccCCHHH--HHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEK--VFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~--~l~~~~r~LkpgG~li~~ 193 (282)
-. . .. .+..+.+. +||++++.
T Consensus 262 ~G-----~-~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 262 VG-----S-QATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp SC-----C-HHHHHHGGGGEE--EEEEEEEC
T ss_pred CC-----C-chHHHHHHHhhc--CCCEEEEE
Confidence 44 2 22 56666666 89998764
No 399
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=71.15 E-value=6.7 Score=32.59 Aligned_cols=84 Identities=15% Similarity=0.121 Sum_probs=47.8
Q ss_pred eEEEeCCc-ccchhhhhc--CCC--eEEEEcCCHHHHHhCCCCCce--EEeecccccCCCCCCC-ceeEEEecchhhccC
Q 023470 100 EVLDLMSS-WVSHLPQEV--SYK--RVVGHGLNAQELAKNPRLEYF--IVKDLNQDQKLEFDHC-SFDAVVCAVSVQYLQ 171 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~~--~v~giD~s~~~l~~~~~~~~~--~~~d~~~~~~l~~~~~-s~D~v~~~~~l~~~~ 171 (282)
+|.=||+| +|..++... .+. +|+++|.+++.++........ ...+. .+. . . ..|+|+.+--...
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~---~~~-~--~~~aDvVilavp~~~-- 74 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---AKV-E--DFSPDFVMLSSPVRT-- 74 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---GGG-G--GTCCSEEEECSCHHH--
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCH---HHH-h--cCCCCEEEEcCCHHH--
Confidence 57789998 454443322 344 899999998766543322110 11122 111 1 2 5788887643322
Q ss_pred CHHHHHHHHHHcccCCcEEEE
Q 023470 172 QPEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~ 192 (282)
...++.++...+++|..++.
T Consensus 75 -~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 75 -FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp -HHHHHHHHHHHSCTTCEEEE
T ss_pred -HHHHHHHHHhhCCCCcEEEE
Confidence 24577788888998875443
No 400
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=69.85 E-value=1.4 Score=36.87 Aligned_cols=38 Identities=29% Similarity=0.482 Sum_probs=28.2
Q ss_pred CceeEEEec----chhhccCCHH-------HHHHHHHHcccCCcEEEEE
Q 023470 156 CSFDAVVCA----VSVQYLQQPE-------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 156 ~s~D~v~~~----~~l~~~~~~~-------~~l~~~~r~LkpgG~li~~ 193 (282)
+.||+|+++ +-.||...-+ .+-..+.+.|||||.+++.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 789999998 4456654222 2456788999999999876
No 401
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=69.52 E-value=5.2 Score=40.17 Aligned_cols=94 Identities=10% Similarity=0.105 Sum_probs=66.0
Q ss_pred CCeEEEeCCcccchhhhhc-CCCeEEEEcCCHH---HHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhcc---
Q 023470 98 GSEVLDLMSSWVSHLPQEV-SYKRVVGHGLNAQ---ELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL--- 170 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~~-~~~~v~giD~s~~---~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~--- 170 (282)
+..+||+|.|--.++.... +...|+.+|.-+- |-........|++.|...+ .+ .....+|++.|.++|-.-
T Consensus 828 ~~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~-~~-~~~~~~d~vtailSLGAA~a~ 905 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTA-AF-WNGIRCDSATAIFTIGAAAAA 905 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSG-GG-GSSCCCSEEEETTTHHHHHHH
T ss_pred CCEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEeccccc-ee-EecCCCCEEEEeeechhhhhh
Confidence 4789999999655555544 6789999998763 2222223357888887542 11 234679999999887544
Q ss_pred --CCHHHHHHHHHHcccCCcE--EEEE
Q 023470 171 --QQPEKVFAEVFRVLKPGGV--FIVS 193 (282)
Q Consensus 171 --~~~~~~l~~~~r~LkpgG~--li~~ 193 (282)
-+..+.++.+.+.+++.|. +++.
T Consensus 906 a~~tl~~~l~~~l~~~~~~~v~~l~lQ 932 (1299)
T 3iyl_W 906 AGTDLIAFVQQLIPRIVAAGGTRMWLQ 932 (1299)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcCceEEEEE
Confidence 3788899999999998886 5554
No 402
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.11 E-value=8.5 Score=30.96 Aligned_cols=98 Identities=13% Similarity=-0.060 Sum_probs=58.4
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
...+|+=+||| .|..++... .+. |+++|.+++.++.......+..+|......+. ..-...|+|++.. ++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-----~~ 81 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL-----ES 81 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECC-----SC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcC-----CC
Confidence 35679999998 455555544 345 99999998766543333456667764322121 1124578888754 23
Q ss_pred HHH--HHHHHHHcccCCcEEEEEEcCchhH
Q 023470 173 PEK--VFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 173 ~~~--~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
.+. .+....+-+.|+..++..+.++...
T Consensus 82 d~~n~~~~~~a~~~~~~~~iia~~~~~~~~ 111 (234)
T 2aef_A 82 DSETIHCILGIRKIDESVRIIAEAERYENI 111 (234)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECSSGGGH
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECCHhHH
Confidence 332 4556677788887888776655443
No 403
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.63 E-value=11 Score=28.04 Aligned_cols=99 Identities=9% Similarity=-0.036 Sum_probs=56.2
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCC-HH---HHHhC-CCCCceEEeecccccCCC-CCCCceeEEEecchhh
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLN-AQ---ELAKN-PRLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s-~~---~l~~~-~~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~ 168 (282)
..+|+=+||| .|..+.... .+.+|+.+|.+ ++ .+... .....+..+|......+. ..-...|+|++...-.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 3568888998 455554433 56899999997 43 23221 223456666664321111 1124578888764311
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEEEcCchh
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
.....+....+-+.|...++....++..
T Consensus 83 ---~~n~~~~~~a~~~~~~~~ii~~~~~~~~ 110 (153)
T 1id1_A 83 ---ADNAFVVLSAKDMSSDVKTVLAVSDSKN 110 (153)
T ss_dssp ---HHHHHHHHHHHHHTSSSCEEEECSSGGG
T ss_pred ---HHHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 1123556667777788888776655544
No 404
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.97 E-value=6.7 Score=33.16 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=48.9
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.+.+|+=||+| .|...+... -+.+|++.|.+++..+...... ....+. .++.---...|+|+..--.+-+ +
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-~~~~~~---~~l~~~l~~aDvVi~~~p~~~i-~- 229 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMG-LVPFHT---DELKEHVKDIDICINTIPSMIL-N- 229 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CEEEEG---GGHHHHSTTCSEEEECCSSCCB-C-
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC-CeEEch---hhHHHHhhCCCEEEECCChhhh-C-
Confidence 56789999998 444443322 4569999999986544221111 111111 1111001357999887665333 3
Q ss_pred HHHHHHHHHcccCCcEEEEE
Q 023470 174 EKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~~ 193 (282)
++....+|||+.++-.
T Consensus 230 ----~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 230 ----QTVLSSMTPKTLILDL 245 (300)
T ss_dssp ----HHHHTTSCTTCEEEEC
T ss_pred ----HHHHHhCCCCCEEEEE
Confidence 2345778998876643
No 405
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=64.73 E-value=9.2 Score=33.67 Aligned_cols=67 Identities=9% Similarity=0.140 Sum_probs=39.5
Q ss_pred CeEEEeCCcccchh--hhhcCCCeEEEEcCCHHHHHhCC---CCCceEEeeccccc--CC---CCCCCceeEEEecc
Q 023470 99 SEVLDLMSSWVSHL--PQEVSYKRVVGHGLNAQELAKNP---RLEYFIVKDLNQDQ--KL---EFDHCSFDAVVCAV 165 (282)
Q Consensus 99 ~~vLDiGcG~~~~~--~~~~~~~~v~giD~s~~~l~~~~---~~~~~~~~d~~~~~--~l---~~~~~s~D~v~~~~ 165 (282)
.+++|+-||.|... ....+...+.++|+++.+++..+ ....+...|+.... .+ ......+|+|+...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 57999999876432 22235556779999998775432 22344556663210 01 01245799999863
No 406
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=64.47 E-value=6.6 Score=33.20 Aligned_cols=36 Identities=17% Similarity=-0.055 Sum_probs=25.6
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
..+|.=||+| .|..++... .+.+|++.|.+++.++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~ 45 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACAN 45 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 4578889998 455444332 56799999999876654
No 407
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=64.42 E-value=3.4 Score=35.02 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=28.4
Q ss_pred CceeEEEecchh----hc-c--CCHH----HHHHHHHHcccCCcEEEEEEc
Q 023470 156 CSFDAVVCAVSV----QY-L--QQPE----KVFAEVFRVLKPGGVFIVSFS 195 (282)
Q Consensus 156 ~s~D~v~~~~~l----~~-~--~~~~----~~l~~~~r~LkpgG~li~~~~ 195 (282)
+.+|+|++...- || - .|.. -+++.+..+|+|||.+++.+-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 679999998533 33 1 1222 267888999999999998753
No 408
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=63.76 E-value=1.9 Score=37.64 Aligned_cols=65 Identities=20% Similarity=0.211 Sum_probs=39.5
Q ss_pred CCeEEEeCCcccchhh--hhcC--CCeEEEEcCCHHHHHhCCC---CCceEEeecccccCCC---CCCCceeEEEecc
Q 023470 98 GSEVLDLMSSWVSHLP--QEVS--YKRVVGHGLNAQELAKNPR---LEYFIVKDLNQDQKLE---FDHCSFDAVVCAV 165 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~--~~~~--~~~v~giD~s~~~l~~~~~---~~~~~~~d~~~~~~l~---~~~~s~D~v~~~~ 165 (282)
..+|||+.||.|..-. ...+ ...|.++|+++.+++..+. ...+...|+ ..+. ++...+|+|+...
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di---~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTI---EGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCG---GGCCHHHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCH---HHccHhHcCcCCcCEEEEcC
Confidence 3579999998765322 2223 3479999999988754332 223456666 3332 1112589999873
No 409
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=63.45 E-value=6.2 Score=33.96 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=49.8
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEee--------cc-cccCCCCCCCceeEEEecch
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKD--------LN-QDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d--------~~-~~~~l~~~~~s~D~v~~~~~ 166 (282)
++|.=||+| .|..++... .+.+|+++|.+++.++..+......+.. +. ...++.-.-..+|+|+.+--
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 578999998 454443322 5678999999987654322110011000 00 00111000135788887643
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-.. ...+++.+...|++|..++..
T Consensus 85 ~~~---~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIH---HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp GGG---HHHHHHHHGGGCCTTCEEEES
T ss_pred chH---HHHHHHHHHHhCCCCCEEEEc
Confidence 222 256788888889987655443
No 410
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=62.61 E-value=7.5 Score=31.97 Aligned_cols=87 Identities=7% Similarity=0.001 Sum_probs=48.4
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCe-EEEEcCCHHHHHhCCCCCceE-EeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKR-VVGHGLNAQELAKNPRLEYFI-VKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~-v~giD~s~~~l~~~~~~~~~~-~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
+++|.=|||| .|..++... .+.+ |..+|.+++.++......... ..+. .+. . ...|+|+.+---..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~---~~~-~--~~~Dvvi~av~~~~--- 80 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDL---AEV-N--PYAKLYIVSLKDSA--- 80 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCG---GGS-C--SCCSEEEECCCHHH---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCH---HHH-h--cCCCEEEEecCHHH---
Confidence 3578889998 444443322 2445 899999987664432211111 1222 122 1 24788888654332
Q ss_pred HHHHHHHHHHcccCCcEEEEEE
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~ 194 (282)
...+++++...+++|.. ++++
T Consensus 81 ~~~v~~~l~~~~~~~~i-vv~~ 101 (266)
T 3d1l_A 81 FAELLQGIVEGKREEAL-MVHT 101 (266)
T ss_dssp HHHHHHHHHTTCCTTCE-EEEC
T ss_pred HHHHHHHHHhhcCCCcE-EEEC
Confidence 25577777777777654 4443
No 411
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=62.44 E-value=24 Score=28.83 Aligned_cols=68 Identities=7% Similarity=-0.003 Sum_probs=44.0
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhC-CCCCceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKN-PRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~-~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
++||=.||| .|..+.... .+.+|++++.++...... .....+..+|+ .++. -..+|+|+.+.......
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~---~d~~--~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPG---EEPS--LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSS---SCCC--CTTCCEEEECCCCBTTB
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecc---cccc--cCCCCEEEECCCccccc
Confidence 579999997 455554433 568999999987644321 13345677777 3444 35689999887654433
No 412
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=61.33 E-value=9.2 Score=34.40 Aligned_cols=86 Identities=12% Similarity=-0.025 Sum_probs=49.0
Q ss_pred CCCCeEEEeCCcc-cchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 96 RPGSEVLDLMSSW-VSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 96 ~~~~~vLDiGcG~-~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
-.+.+|+=+|+|. |...+... -+.+|+++|+++.....+.... +.+.++. +.+ ...|+|+.+-.-.|+-+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G-~~v~~Le--eal----~~ADIVi~atgt~~lI~ 290 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDG-FRLVKLN--EVI----RQVDIVITCTGNKNVVT 290 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CEECCHH--HHT----TTCSEEEECSSCSCSBC
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcC-CEeccHH--HHH----hcCCEEEECCCCcccCC
Confidence 3678999999983 44433322 4679999999985332221111 2233331 112 24688888533223222
Q ss_pred HHHHHHHHHHcccCCcEEEEE
Q 023470 173 PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+..+.+|||+.++-.
T Consensus 291 -----~e~l~~MK~gailINv 306 (435)
T 3gvp_A 291 -----REHLDRMKNSCIVCNM 306 (435)
T ss_dssp -----HHHHHHSCTTEEEEEC
T ss_pred -----HHHHHhcCCCcEEEEe
Confidence 3677788999876543
No 413
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=60.44 E-value=7.1 Score=32.89 Aligned_cols=87 Identities=11% Similarity=0.049 Sum_probs=48.0
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.+.+|+=+|+| .|..++... -+.+|+++|.+++..+...... ....+. .++.-.-...|+|+..--.+-+ +.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-~~~~~~---~~l~~~l~~aDvVi~~~p~~~i-~~ 228 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMG-MEPFHI---SKAAQELRDVDVCINTIPALVV-TA 228 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-SEEEEG---GGHHHHTTTCSEEEECCSSCCB-CH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-CeecCh---hhHHHHhcCCCEEEECCChHHh-CH
Confidence 57789999998 444443322 4569999999986543222111 111111 1111001357998887544322 22
Q ss_pred HHHHHHHHHcccCCcEEEEE
Q 023470 174 EKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~~ 193 (282)
+....+|||+.++-.
T Consensus 229 -----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 229 -----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp -----HHHHHSCTTCEEEEC
T ss_pred -----HHHHhcCCCCEEEEe
Confidence 345568998876643
No 414
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=60.30 E-value=11 Score=30.01 Aligned_cols=96 Identities=13% Similarity=-0.046 Sum_probs=55.9
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhC-C-CCCceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKN-P-RLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~-~-~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
++|+=+|+| .|..++... .+..|+.+|.+++.++.. . ....+..+|......+. ..-..+|+|++... +
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~-----~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP-----R 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS-----C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC-----C
Confidence 357889998 455554433 578999999999876542 1 12345666664321121 11245788887542 3
Q ss_pred HH--HHHHHHHHcccCCcEEEEEEcCchh
Q 023470 173 PE--KVFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 173 ~~--~~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
.. ..+....+.+.|...++....++..
T Consensus 76 d~~n~~~~~~a~~~~~~~~iia~~~~~~~ 104 (218)
T 3l4b_C 76 DEVNLFIAQLVMKDFGVKRVVSLVNDPGN 104 (218)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECCCSGGG
T ss_pred cHHHHHHHHHHHHHcCCCeEEEEEeCcch
Confidence 32 2555566666677777665554433
No 415
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=59.95 E-value=12 Score=31.96 Aligned_cols=37 Identities=5% Similarity=-0.101 Sum_probs=26.4
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
..++|.=||+| .|..++... .+.+|++.|.+++.++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~ 69 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAAS 69 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHH
Confidence 34689999998 455444332 56799999999887654
No 416
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=59.85 E-value=7 Score=37.29 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=25.6
Q ss_pred CCceeEEEecch-hhccCC--HHHHHHHHHHcccCCcEEEE
Q 023470 155 HCSFDAVVCAVS-VQYLQQ--PEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 155 ~~s~D~v~~~~~-l~~~~~--~~~~l~~~~r~LkpgG~li~ 192 (282)
+..+|+++.-.. -..-++ ...+++.+.++++|||.+.-
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 467999987532 111111 16699999999999998763
No 417
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=59.34 E-value=18 Score=28.17 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=54.6
Q ss_pred CeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhcc--CC
Q 023470 99 SEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL--QQ 172 (282)
Q Consensus 99 ~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~--~~ 172 (282)
++||=.|+ | .|..+...+ .+.+|++++.+++.+........+..+|+..... . .-..+|+|+.+...... ..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-~-~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-S-DLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-H-HHTTCSEEEECCCSSTTTTTS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh-h-hhcCCCEEEECCcCCccccch
Confidence 36888887 4 566555443 5789999999977665433445677778754221 1 11357999988654221 12
Q ss_pred HHHHHHHHHHcccC--CcEEEEE
Q 023470 173 PEKVFAEVFRVLKP--GGVFIVS 193 (282)
Q Consensus 173 ~~~~l~~~~r~Lkp--gG~li~~ 193 (282)
......++...++. .+++++.
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEE
T ss_pred HHHHHHHHHHHHHhcCCceEEEE
Confidence 23344555555554 3566654
No 418
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=58.74 E-value=4.6 Score=37.50 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCCCCCCceeEEEec----chhhccCCHH-------HHHHHHHHcccCCcEEEEE
Q 023470 150 KLEFDHCSFDAVVCA----VSVQYLQQPE-------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 150 ~l~~~~~s~D~v~~~----~~l~~~~~~~-------~~l~~~~r~LkpgG~li~~ 193 (282)
.+| ++++||+|+.+ +-.||...-+ .+-....+.|||||.+++.
T Consensus 215 G~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~ 268 (670)
T 4gua_A 215 GFP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVK 268 (670)
T ss_dssp CCC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEE
Confidence 344 34789999998 4556664222 2456788999999999875
No 419
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=58.53 E-value=1.2 Score=39.62 Aligned_cols=95 Identities=17% Similarity=0.142 Sum_probs=49.7
Q ss_pred CCCeEEEeCCcc-cchhhhhc--CCCeEEEEcCCHHHHHhCCCCC-ceEEeeccc------------------ccCCCCC
Q 023470 97 PGSEVLDLMSSW-VSHLPQEV--SYKRVVGHGLNAQELAKNPRLE-YFIVKDLNQ------------------DQKLEFD 154 (282)
Q Consensus 97 ~~~~vLDiGcG~-~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~-~~~~~d~~~------------------~~~l~~~ 154 (282)
++.+|+=+|+|. |...++.. -+.+|+++|.++..++.+.... .+...+... ...+.-.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 457899999983 33332221 3569999999987554433221 111100000 0011101
Q ss_pred CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEE
Q 023470 155 HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
-...|+|+..-.+..-..+.-+-+++.+.+|||+.++
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIV 299 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVV 299 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEE
Confidence 1458999976322211111113478888999987765
No 420
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=58.28 E-value=10 Score=30.25 Aligned_cols=76 Identities=21% Similarity=0.158 Sum_probs=47.1
Q ss_pred CCCeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhC-CCCC-ceEEeecccccCCCCCCCceeEEEecchhhcc
Q 023470 97 PGSEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKN-PRLE-YFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 97 ~~~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~-~~~~-~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
.+++||=.|+ | .|..+...+ .+.+|++++.++..++.. .... .+..+|+. ..+.-.-+.+|+|+.+......
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~ 97 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPH 97 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCC
Confidence 4678999999 3 566555443 678999999987655321 1234 56777875 2222112358999998765443
Q ss_pred CCHH
Q 023470 171 QQPE 174 (282)
Q Consensus 171 ~~~~ 174 (282)
.+++
T Consensus 98 ~~~~ 101 (236)
T 3e8x_A 98 TGAD 101 (236)
T ss_dssp SCHH
T ss_pred CCcc
Confidence 3433
No 421
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=58.12 E-value=17 Score=31.34 Aligned_cols=92 Identities=17% Similarity=0.105 Sum_probs=45.8
Q ss_pred hCCCCCeEEEeCC-c-ccch---hhhhcCCCeEEE-EcCCH---HHHHhCCCCCceEEeeccc-----ccCCCCCCCcee
Q 023470 94 MLRPGSEVLDLMS-S-WVSH---LPQEVSYKRVVG-HGLNA---QELAKNPRLEYFIVKDLNQ-----DQKLEFDHCSFD 159 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~---~~~~~~~~~v~g-iD~s~---~~l~~~~~~~~~~~~d~~~-----~~~l~~~~~s~D 159 (282)
.+.++.+||=+|+ | .|.. +++. .+.++++ ++.++ +.++.+++...-.+.+... ...+.-..+.+|
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHH-cCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCce
Confidence 4668899999998 5 3432 2332 3455554 45432 1222222221111112110 011111111489
Q ss_pred EEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 160 AVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 160 ~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
+|+-+-. . . .+.+..++|++||++++.
T Consensus 243 vvid~~g-----~-~-~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 243 LALNCVG-----G-K-SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp EEEESSC-----H-H-HHHHHHTTSCTTCEEEEC
T ss_pred EEEECCC-----c-H-HHHHHHHhhCCCCEEEEE
Confidence 9887643 1 2 234678999999998764
No 422
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=57.55 E-value=45 Score=29.87 Aligned_cols=37 Identities=19% Similarity=0.079 Sum_probs=24.0
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
.+.+.-=||.| +|..++..+ .+.+|+++|++++.++.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~ 49 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDK 49 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 35556667887 444443332 57899999999987653
No 423
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=56.66 E-value=6.8 Score=32.94 Aligned_cols=35 Identities=3% Similarity=-0.096 Sum_probs=24.8
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
.+|.=|||| .|..++... .+.+|+++|.+++.++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~ 41 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDG 41 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHH
Confidence 468889998 455444332 56799999999876654
No 424
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=56.61 E-value=5.1 Score=33.82 Aligned_cols=82 Identities=11% Similarity=0.077 Sum_probs=46.3
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH--
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP-- 173 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~-- 173 (282)
.+|.=||+| .|..++... .+.+|++.|.+++.++......-....+. .++ -. .|+|+.+- ++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~---~~~---~~-aDvvi~~v-----p~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSV---ADV---AA-ADLIHITV-----LDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSH---HHH---TT-SSEEEECC-----SSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCH---HHH---Hh-CCEEEEEC-----CChHH
Confidence 568889998 455444432 46799999999865433221111111111 111 12 68877643 332
Q ss_pred -HHHHHHHHHcccCCcEEEE
Q 023470 174 -EKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 174 -~~~l~~~~r~LkpgG~li~ 192 (282)
+.+++++...++||..++-
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 4467788888888766543
No 425
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=56.49 E-value=11 Score=31.95 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=37.5
Q ss_pred eEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCHHH-
Q 023470 100 EVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPEK- 175 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~~- 175 (282)
+|==||.| .|..++... .+.+|++.|.+++.++......-....+. .++ -...|+|+++. ++...
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~---~e~---~~~~dvvi~~l-----~~~~~~ 75 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENA---IDA---ITPGGIVFSVL-----ADDAAV 75 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSG---GGG---CCTTCEEEECC-----SSHHHH
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCH---HHH---HhcCCceeeec-----cchhhH
Confidence 56667887 355444432 67899999999987755443322111111 122 13357777653 22222
Q ss_pred ---HHHHHHHcccCCcEEE
Q 023470 176 ---VFAEVFRVLKPGGVFI 191 (282)
Q Consensus 176 ---~l~~~~r~LkpgG~li 191 (282)
+..++...+++|+.++
T Consensus 76 ~~v~~~~~~~~~~~~~iii 94 (297)
T 4gbj_A 76 EELFSMELVEKLGKDGVHV 94 (297)
T ss_dssp HHHSCHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHhhcCCCeEEE
Confidence 2234556666666544
No 426
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=56.18 E-value=21 Score=27.36 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=52.9
Q ss_pred CCCeEEEeCCcccc---hhhhhcCCCeEEEEcCCHHHHHh-CCCCCceEEeecccccCCCCC----CCceeEEEecchhh
Q 023470 97 PGSEVLDLMSSWVS---HLPQEVSYKRVVGHGLNAQELAK-NPRLEYFIVKDLNQDQKLEFD----HCSFDAVVCAVSVQ 168 (282)
Q Consensus 97 ~~~~vLDiGcG~~~---~~~~~~~~~~v~giD~s~~~l~~-~~~~~~~~~~d~~~~~~l~~~----~~s~D~v~~~~~l~ 168 (282)
..+-|||+|-|.|. ++...++..+|+.+|-.-..-.- ......++.+++. +.++.. ....-++.+-...+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~--~tL~~~~~r~g~~a~LaHaD~G~g 117 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIR--ETLPATLERFGATASLVHADLGGH 117 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHH--HHHHHHHHHHCSCEEEEEECCCCS
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHH--HHHHHHHHhcCCceEEEEeecCCC
Confidence 45679999999876 55666799999999954211111 1122356677764 233210 23344444444333
Q ss_pred ccCCHHH----HHHHHHHcccCCcEEEEE
Q 023470 169 YLQQPEK----VFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 169 ~~~~~~~----~l~~~~r~LkpgG~li~~ 193 (282)
+-..... +-.-+..+|.|||.++=.
T Consensus 118 ~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 118 NREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp CHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred CcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 2211111 223467889999987754
No 427
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=55.48 E-value=2.1 Score=37.84 Aligned_cols=35 Identities=14% Similarity=-0.036 Sum_probs=23.2
Q ss_pred CCCeEEEeCCcc-cchhhhh--cCCCeEEEEcCCHHHH
Q 023470 97 PGSEVLDLMSSW-VSHLPQE--VSYKRVVGHGLNAQEL 131 (282)
Q Consensus 97 ~~~~vLDiGcG~-~~~~~~~--~~~~~v~giD~s~~~l 131 (282)
++.+|+=+|+|. |...... .-+.+|+++|.++..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 467899999983 3322222 1356899999987544
No 428
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=55.08 E-value=8.7 Score=33.24 Aligned_cols=93 Identities=14% Similarity=0.069 Sum_probs=47.6
Q ss_pred hCCCC-CeEEEeCC-c-ccchhhhh--cCCCeEEEEcCCHHH----HHhCCCCCceEEeeccc----c--cCCC-C---C
Q 023470 94 MLRPG-SEVLDLMS-S-WVSHLPQE--VSYKRVVGHGLNAQE----LAKNPRLEYFIVKDLNQ----D--QKLE-F---D 154 (282)
Q Consensus 94 ~~~~~-~~vLDiGc-G-~~~~~~~~--~~~~~v~giD~s~~~----l~~~~~~~~~~~~d~~~----~--~~l~-~---~ 154 (282)
.+.++ .+||=.|+ | .|....+. ..+.+++++.-+.+. .+.++....-.+.+... + +.+. . .
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhcc
Confidence 45678 89999998 5 34332221 135677777543221 12111111111222210 0 0110 0 1
Q ss_pred CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 155 HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+.+|+|+-+-.- .... .+.++|++||+++..
T Consensus 243 ~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 243 GGEAKLALNCVGG------KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp TCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEEC
T ss_pred CCCceEEEECCCc------hhHH-HHHHHhccCCEEEEe
Confidence 2469999876541 2233 678999999998764
No 429
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=55.06 E-value=4.3 Score=28.35 Aligned_cols=69 Identities=16% Similarity=-0.010 Sum_probs=39.2
Q ss_pred CCeEEEeCCc-ccchhhhhc--CC-CeEEEEcCCHHHHHhCC-CCCceEEeecccccCCCCCCCceeEEEecch
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SY-KRVVGHGLNAQELAKNP-RLEYFIVKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~-~~v~giD~s~~~l~~~~-~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
..+|+=+|+| .|..+.... .+ .+|+++|.+++.++... ....+...|+.....+.-.-..+|+|+.+-.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 4579999997 454443322 44 78999999987665432 2234455555321111100135788887753
No 430
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=54.89 E-value=10 Score=34.17 Aligned_cols=33 Identities=6% Similarity=-0.053 Sum_probs=22.8
Q ss_pred CCeEEEeCCcccchhhhhc--------CCCeEEEEcCCHHH
Q 023470 98 GSEVLDLMSSWVSHLPQEV--------SYKRVVGHGLNAQE 130 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~~--------~~~~v~giD~s~~~ 130 (282)
...|+|+|.|.|..+.... ...+++-|++|+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 4689999998776432211 13489999999754
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=54.33 E-value=13 Score=29.15 Aligned_cols=69 Identities=7% Similarity=0.053 Sum_probs=42.6
Q ss_pred CeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeeccc-ccCCCCCCCceeEEEecchhh
Q 023470 99 SEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ-DQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 99 ~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~-~~~l~~~~~s~D~v~~~~~l~ 168 (282)
++||=.|+ | .|..+...+ .+.+|++++.++..+... ....+..+|+.. .+.+.-.-..+|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 36788886 4 566555443 568999999987654332 334567778754 222211123589999886644
No 432
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=54.16 E-value=1.3 Score=38.83 Aligned_cols=95 Identities=18% Similarity=0.089 Sum_probs=49.4
Q ss_pred CCeEEEeCCc-ccchhhhh--cCCCeEEEEcCCHHHHHhCCCC--CceEEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQE--VSYKRVVGHGLNAQELAKNPRL--EYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~--~~~~~v~giD~s~~~l~~~~~~--~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
+.+||=+|+| .|...... ..+.+|+++|.+++.++..... ......+... .++.-.-..+|+|+.+-.......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNS-AEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH-HHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCH-HHHHHHHcCCCEEEECCCcCCCCC
Confidence 4789999997 33322221 1345999999998765443211 1111111100 111000124899987654432111
Q ss_pred HHHHHHHHHHcccCCcEEEEE
Q 023470 173 PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~ 193 (282)
+.-+.++..+.++|||.++..
T Consensus 246 ~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEEET
T ss_pred CeecCHHHHhhCCCCCEEEEE
Confidence 111245667889999987743
No 433
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=53.82 E-value=13 Score=32.95 Aligned_cols=90 Identities=13% Similarity=0.015 Sum_probs=47.6
Q ss_pred eEEEeCCc-ccchhhhhc-CCCeEEEEcCCHHHHHhCCC-CCceEE-------------eecccccCCCCCCCceeEEEe
Q 023470 100 EVLDLMSS-WVSHLPQEV-SYKRVVGHGLNAQELAKNPR-LEYFIV-------------KDLNQDQKLEFDHCSFDAVVC 163 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~-~~~~v~giD~s~~~l~~~~~-~~~~~~-------------~d~~~~~~l~~~~~s~D~v~~ 163 (282)
+|.=||+| .|..++..+ .+.+|+++|.+++.++..+. ...+.. .... .+..-.-...|+|+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t--~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKAT--LDSKAAYKEAELVII 79 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE--SCHHHHHHHCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEe--CCHHHHhcCCCEEEE
Confidence 57778998 344333221 36799999999876653221 110000 0000 010000124677777
Q ss_pred cchhh-----ccCC---HHHHHHHHHHcccCCcEEEE
Q 023470 164 AVSVQ-----YLQQ---PEKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 164 ~~~l~-----~~~~---~~~~l~~~~r~LkpgG~li~ 192 (282)
+---. ..+| .+.+++.+.. +++|..++.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 63211 1112 5678888888 999887776
No 434
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=53.80 E-value=11 Score=36.65 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCC-c-ccchhhh--hcCCCeEEEEcCCHHHHHhCCCCCceEEeecccccCC-----C-CCCCceeEEEec
Q 023470 95 LRPGSEVLDLMS-S-WVSHLPQ--EVSYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKL-----E-FDHCSFDAVVCA 164 (282)
Q Consensus 95 ~~~~~~vLDiGc-G-~~~~~~~--~~~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l-----~-~~~~s~D~v~~~ 164 (282)
++++.+||=.|+ | .|....+ +..+.+|++++.+++ .+..+ ...-.+.+... .++ . -....+|+|+-+
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~-lga~~v~~~~~-~~~~~~i~~~t~g~GvDvVld~ 419 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE-LSREHLASSRT-CDFEQQFLGATGGRGVDVVLNS 419 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC-SCGGGEECSSS-STHHHHHHHHSCSSCCSEEEEC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh-cChhheeecCC-hhHHHHHHHHcCCCCeEEEEEC
Confidence 457889999996 5 3432222 125668999986652 22222 21111222210 000 0 112459999986
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
..- ..+....++|+|||+++..
T Consensus 420 ~gg-------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 420 LAG-------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp CCT-------TTTHHHHTSCTTCEEEEEC
T ss_pred CCc-------HHHHHHHHHhcCCCEEEEe
Confidence 431 3458889999999998864
No 435
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=53.56 E-value=13 Score=33.57 Aligned_cols=34 Identities=3% Similarity=-0.213 Sum_probs=24.3
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHH
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELA 132 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~ 132 (282)
++|.=||+| +|..++..+ .+.+|+++|.+++.++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~ 39 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIE 39 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence 468888998 454444332 5679999999987654
No 436
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=53.50 E-value=2.6 Score=37.55 Aligned_cols=37 Identities=8% Similarity=-0.084 Sum_probs=24.4
Q ss_pred CCCeEEEeCCcc-cchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 97 PGSEVLDLMSSW-VSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 97 ~~~~vLDiGcG~-~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
++.+|+=+|+|. |....... -+.+|+++|.++..++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~ 210 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ 210 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 467899999983 33222221 35699999999865543
No 437
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=53.34 E-value=6.1 Score=33.08 Aligned_cols=84 Identities=13% Similarity=0.073 Sum_probs=45.1
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecch-hhccCCHH
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVS-VQYLQQPE 174 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~-l~~~~~~~ 174 (282)
++|.=|||| .|..++... .+.+|+++|.+++.++......-....+. .+. + ...|+|+.+-- -.+ .+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~---~~~-~--~~~D~vi~~v~~~~~---~~ 76 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTA---KAI-A--EQCDVIITMLPNSPH---VK 76 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSH---HHH-H--HHCSEEEECCSSHHH---HH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCH---HHH-H--hCCCEEEEECCCHHH---HH
Confidence 478899998 454443322 45789999999876643322111111111 111 1 24688877542 111 13
Q ss_pred HHH---HHHHHcccCCcEEE
Q 023470 175 KVF---AEVFRVLKPGGVFI 191 (282)
Q Consensus 175 ~~l---~~~~r~LkpgG~li 191 (282)
.++ +++...++||..++
T Consensus 77 ~~~~~~~~l~~~l~~~~~vv 96 (299)
T 1vpd_A 77 EVALGENGIIEGAKPGTVLI 96 (299)
T ss_dssp HHHHSTTCHHHHCCTTCEEE
T ss_pred HHHhCcchHhhcCCCCCEEE
Confidence 344 45667788877553
No 438
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=52.90 E-value=6.1 Score=35.27 Aligned_cols=38 Identities=5% Similarity=-0.031 Sum_probs=25.6
Q ss_pred CCCeEEEeCCcc-cchhhhhc--CCCeEEEEcCCHHHHHhC
Q 023470 97 PGSEVLDLMSSW-VSHLPQEV--SYKRVVGHGLNAQELAKN 134 (282)
Q Consensus 97 ~~~~vLDiGcG~-~~~~~~~~--~~~~v~giD~s~~~l~~~ 134 (282)
++.+|+=+|+|. |...++.. -+.+|+++|.++..++.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 467899999983 33332222 467999999998665443
No 439
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=52.50 E-value=10 Score=34.59 Aligned_cols=37 Identities=5% Similarity=-0.159 Sum_probs=26.9
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
..++|.=||+| +|..++..+ .+.+|+++|++++.++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~ 46 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDI 46 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 46789999998 454444332 56799999999887654
No 440
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=52.30 E-value=31 Score=26.91 Aligned_cols=93 Identities=19% Similarity=0.068 Sum_probs=55.7
Q ss_pred CeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHh-CCCCCceEEeecccccCCCCCCCceeEEEecchhhccCC-
Q 023470 99 SEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAK-NPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ- 172 (282)
Q Consensus 99 ~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~-~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~- 172 (282)
++||=.|+ | .|..+...+ .+.+|++++.++..+.. ......++.+|+..... . .-..+|+|+.+....+.+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~-~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-A-DLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-H-HHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-h-hcccCCEEEECCccCCCcch
Confidence 36888898 4 566555443 67899999999876653 23345677788754222 1 1135899998876532211
Q ss_pred ---HHHHHHHHHHcccC-CcEEEEE
Q 023470 173 ---PEKVFAEVFRVLKP-GGVFIVS 193 (282)
Q Consensus 173 ---~~~~l~~~~r~Lkp-gG~li~~ 193 (282)
......++.+.++. |+++++.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 12245566666654 4565544
No 441
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=52.24 E-value=11 Score=32.04 Aligned_cols=64 Identities=13% Similarity=0.133 Sum_probs=37.2
Q ss_pred CeEEEeCCcccc--hhhhhcCCCeEEEEcCCHHHHHhCC--CCCceEEeecccccCCCCCCCceeEEEec
Q 023470 99 SEVLDLMSSWVS--HLPQEVSYKRVVGHGLNAQELAKNP--RLEYFIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 99 ~~vLDiGcG~~~--~~~~~~~~~~v~giD~s~~~l~~~~--~~~~~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
++|||+=||.|. .-....+..-+.++|+++.+.+.-+ -......+|+.....-.+ ..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~--~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEF--PKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGS--CCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhC--CcccEEEec
Confidence 479999887553 2223335556679999987665322 123456677733211112 358999887
No 442
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=52.06 E-value=19 Score=32.15 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=23.5
Q ss_pred eEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHh
Q 023470 100 EVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~ 133 (282)
+|.=||+| .|..++..+ .+.+|+++|.+++.++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~ 38 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL 38 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 56778998 344443332 56799999999887654
No 443
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=50.97 E-value=65 Score=28.15 Aligned_cols=94 Identities=16% Similarity=0.040 Sum_probs=53.7
Q ss_pred CCCeEEEeCCcccchhhhhcCCCeEEEEcCCHH---HHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhh-ccCC
Q 023470 97 PGSEVLDLMSSWVSHLPQEVSYKRVVGHGLNAQ---ELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ-YLQQ 172 (282)
Q Consensus 97 ~~~~vLDiGcG~~~~~~~~~~~~~v~giD~s~~---~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~-~~~~ 172 (282)
.+.+||.++-+.|..-....+..+++.+.-|.- .++.+.-... . . ..+......||+|+...-=+ ....
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~---~---~~~~~~~~~~d~v~~~~Pk~k~~~~ 117 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQAR-L---A---LPWEAAAGAYDLVVLALPAGRGTAY 117 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCE-E---C---CGGGSCTTCEEEEEEECCGGGCHHH
T ss_pred hCCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCcc-c---c---CCccCCcCCCCEEEEECCcchhHHH
Confidence 356899998865542222224467887766643 3333222111 1 1 12222356799988743210 0012
Q ss_pred HHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+..|..+.+.|+|||.+++.-.+.
T Consensus 118 ~~~~l~~~~~~l~~g~~i~~~g~~~ 142 (381)
T 3dmg_A 118 VQASLVAAARALRMGGRLYLAGDKN 142 (381)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred HHHHHHHHHHhCCCCCEEEEEEccH
Confidence 3568899999999999999886554
No 444
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=50.74 E-value=8.2 Score=36.66 Aligned_cols=37 Identities=22% Similarity=0.376 Sum_probs=25.9
Q ss_pred CCceeEEEecchhhccCCH----HHHHHHHHHcccCCcEEEE
Q 023470 155 HCSFDAVVCAVSVQYLQQP----EKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~----~~~l~~~~r~LkpgG~li~ 192 (282)
+..||+++.-..- --.++ +.+++.++++++|||.+.-
T Consensus 177 ~~~~d~~~~D~f~-p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 177 NQKVDAWFLDGFA-PAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp TTCEEEEEECCSC-GGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccEEEECCCC-CcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 4679999875321 11122 5699999999999998764
No 445
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=49.76 E-value=26 Score=31.95 Aligned_cols=84 Identities=10% Similarity=0.027 Sum_probs=48.2
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.+.+|+=+|+| .|...+..+ .+.+|+.+|+++.....+.... +.+.+. .+. ....|+|+....-.++-+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g-~dv~~l---ee~---~~~aDvVi~atG~~~vl~- 335 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEG-LQVLTL---EDV---VSEADIFVTTTGNKDIIM- 335 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CEECCG---GGT---TTTCSEEEECSSCSCSBC-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC-CccCCH---HHH---HHhcCEEEeCCCChhhhh-
Confidence 57889999996 444443332 5679999999986543322111 122232 221 235788886654333222
Q ss_pred HHHHHHHHHcccCCcEEEE
Q 023470 174 EKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~ 192 (282)
.+..+.+|+|+.++-
T Consensus 336 ----~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 336 ----LDHMKKMKNNAIVCN 350 (488)
T ss_dssp ----HHHHTTSCTTEEEEE
T ss_pred ----HHHHHhcCCCeEEEE
Confidence 345677888886653
No 446
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=48.42 E-value=52 Score=26.80 Aligned_cols=67 Identities=19% Similarity=0.182 Sum_probs=41.8
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-CCCCceeEEEecchh
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSV 167 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l 167 (282)
.++||=.||| .|..+...+ .+.+|++++.++..+ .....+..+|+.....+. .-.+.+|+|+.+...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~ 73 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAA 73 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence 3578888997 455554433 567999999876432 234466777875433332 112358999987654
No 447
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=48.14 E-value=17 Score=32.87 Aligned_cols=86 Identities=14% Similarity=-0.000 Sum_probs=48.8
Q ss_pred CCCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 96 RPGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 96 ~~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
-.+.+|+=+|+| .|..++... -+.+|+++|+++.....+... .+.+.++. +.+ ...|+|+..-.-.|+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~-G~~vv~Le--ElL----~~ADIVv~atgt~~l-- 315 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMD-GFEVVTLD--DAA----STADIVVTTTGNKDV-- 315 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCEECCHH--HHG----GGCSEEEECCSSSSS--
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhc-CceeccHH--HHH----hhCCEEEECCCCccc--
Confidence 367889999998 354444332 467999999988543222111 12222331 112 246888765322222
Q ss_pred HHHHHHHHHHcccCCcEEEEE
Q 023470 173 PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~ 193 (282)
+-++....+|||++++-.
T Consensus 316 ---I~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 316 ---ITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp ---BCHHHHHHSCTTEEEEEC
T ss_pred ---cCHHHHhcCCCCeEEEEc
Confidence 125667778888877643
No 448
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=48.10 E-value=5.2 Score=33.48 Aligned_cols=34 Identities=6% Similarity=-0.116 Sum_probs=23.5
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHH
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELA 132 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~ 132 (282)
++|.=||+| .|..++... .+.+|++.|.+++.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~ 38 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAE 38 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence 467788998 454444332 5679999999986554
No 449
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=47.93 E-value=56 Score=27.64 Aligned_cols=96 Identities=14% Similarity=-0.056 Sum_probs=59.0
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCC-CCCceEEeecccccCCC-CCCCceeEEEecchhhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNP-RLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~-~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~ 172 (282)
..+|+=+|+| .|..+++.. .+. |+.+|.+++.++ .+ ....+..+|....+.+. ..-...|.|++.. ++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~-----~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL-----ES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC-----SS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC-----Cc
Confidence 4579999998 455554433 355 999999998776 33 33456777765432221 1234688888754 23
Q ss_pred HHH--HHHHHHHcccCCcEEEEEEcCchhH
Q 023470 173 PEK--VFAEVFRVLKPGGVFIVSFSNRMFY 200 (282)
Q Consensus 173 ~~~--~l~~~~r~LkpgG~li~~~~~~~~~ 200 (282)
.+. ......|-+.|...++....++...
T Consensus 188 d~~n~~~~~~ar~~~~~~~iiar~~~~~~~ 217 (336)
T 1lnq_A 188 DSETIHCILGIRKIDESVRIIAEAERYENI 217 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSEEEEECSSGGGH
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECCHHHH
Confidence 333 4555667788887887776555443
No 450
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=46.86 E-value=21 Score=30.40 Aligned_cols=82 Identities=17% Similarity=0.069 Sum_probs=46.2
Q ss_pred CeEEEeCCc-ccchhhhhc--CC-CeEEEEcCCH-------HHHHhCCCCCceEEe-ecccccCCCCCCCceeEEEecch
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SY-KRVVGHGLNA-------QELAKNPRLEYFIVK-DLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~-~~v~giD~s~-------~~l~~~~~~~~~~~~-d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
++|.=||+| +|..++... .+ .+|++.|.++ +.++...... . .. +. .+. -...|+|+.+--
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g-~-~~~s~---~e~---~~~aDvVi~avp 96 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELG-V-EPLDD---VAG---IACADVVLSLVV 96 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTT-C-EEESS---GGG---GGGCSEEEECCC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCC-C-CCCCH---HHH---HhcCCEEEEecC
Confidence 578899998 455444332 45 7999999997 3333221111 1 22 22 111 134688887532
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
-. ...+.++++...|+||..++
T Consensus 97 ~~---~~~~~~~~i~~~l~~~~ivv 118 (317)
T 4ezb_A 97 GA---ATKAVAASAAPHLSDEAVFI 118 (317)
T ss_dssp GG---GHHHHHHHHGGGCCTTCEEE
T ss_pred CH---HHHHHHHHHHhhcCCCCEEE
Confidence 21 12345678888888876655
No 451
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=46.84 E-value=11 Score=31.55 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=59.8
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHhC----CCCCceEEeecccccCC-------CCCCCceeEE
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAKN----PRLEYFIVKDLNQDQKL-------EFDHCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~~----~~~~~~~~~d~~~~~~l-------~~~~~s~D~v 161 (282)
++..+|=-|+ |.|...+..+ .+.+|+.+|.+++.++.. ........+|+....+. .-.-+..|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5667788888 5666555443 788999999998766432 23344566776442111 1112578999
Q ss_pred EecchhhccC-----CH---HH-----------HHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQ-----QP---EK-----------VFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~-----~~---~~-----------~l~~~~r~LkpgG~li~~ 193 (282)
+.+-.+.... +. +. +.+.+...++.+|.++..
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 9886543321 11 11 466777888888887654
No 452
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=46.39 E-value=8.5 Score=31.49 Aligned_cols=97 Identities=11% Similarity=0.148 Sum_probs=57.0
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHhCC----CCCceEEeecccccCCC-------CCCCceeEE
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAKNP----RLEYFIVKDLNQDQKLE-------FDHCSFDAV 161 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~~~----~~~~~~~~d~~~~~~l~-------~~~~s~D~v 161 (282)
.+.++|=.|+ |.|..++..+ .+.+|+.+|.+++.++... ....+..+|+.....+. -.-+..|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4567888898 4666555443 6789999999987654321 22345566664321110 011468999
Q ss_pred EecchhhccC-----CHH---H-----------HHHHHHHcccCCcEEEEE
Q 023470 162 VCAVSVQYLQ-----QPE---K-----------VFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 162 ~~~~~l~~~~-----~~~---~-----------~l~~~~r~LkpgG~li~~ 193 (282)
+.+-.+.... +.+ . +.+.+...++.+|.++..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9886543321 111 1 355666667778887764
No 453
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.01 E-value=32 Score=28.17 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=55.7
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCC------------HHHHH-------hCCCCCceEEeecccccCCC-
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLN------------AQELA-------KNPRLEYFIVKDLNQDQKLE- 152 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s------------~~~l~-------~~~~~~~~~~~d~~~~~~l~- 152 (282)
.+.+||=.|+ |.|..++..+ .+.+|+.+|.+ .+.++ .......+..+|+.....+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 4567888898 5666555443 67899999987 43322 22233345666764321110
Q ss_pred -C-----CCCceeEEEecchhhccC------CHHH-----------HHHHHHHcccCCcEEEEE
Q 023470 153 -F-----DHCSFDAVVCAVSVQYLQ------QPEK-----------VFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 153 -~-----~~~s~D~v~~~~~l~~~~------~~~~-----------~l~~~~r~LkpgG~li~~ 193 (282)
+ .-+..|+++.+-.+.... +++. +++.+...++.+|.++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 0 013689999886543221 1111 456667777788887765
No 454
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=45.97 E-value=19 Score=30.93 Aligned_cols=64 Identities=9% Similarity=0.020 Sum_probs=37.2
Q ss_pred CCeEEEeCCcccchh-h-hhcCCCeEEEEcCCHHHHHhCCCC-CceEEeecccccCCCC-CCCceeEEEec
Q 023470 98 GSEVLDLMSSWVSHL-P-QEVSYKRVVGHGLNAQELAKNPRL-EYFIVKDLNQDQKLEF-DHCSFDAVVCA 164 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~-~-~~~~~~~v~giD~s~~~l~~~~~~-~~~~~~d~~~~~~l~~-~~~s~D~v~~~ 164 (282)
+.+++|+.||.|..- . ...+...+.++|+++.+++.-+.+ ......|+. .+.. .-..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~---~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDIT---QVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGG---GSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHH---HcCHhhCCCCCEEEEC
Confidence 468999999876432 2 223555688899999877532211 111145552 2211 11248999987
No 455
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=45.83 E-value=23 Score=31.29 Aligned_cols=35 Identities=6% Similarity=-0.062 Sum_probs=24.2
Q ss_pred CCeEEEeCCcccchhhhh----------cCCCeEEEEcCCHHHHH
Q 023470 98 GSEVLDLMSSWVSHLPQE----------VSYKRVVGHGLNAQELA 132 (282)
Q Consensus 98 ~~~vLDiGcG~~~~~~~~----------~~~~~v~giD~s~~~l~ 132 (282)
...|+|+|.|.|..+... ....+++-||+|+...+
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~ 125 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQ 125 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHH
Confidence 457999999977643221 13458999999996553
No 456
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=45.63 E-value=5.1 Score=32.72 Aligned_cols=84 Identities=8% Similarity=0.112 Sum_probs=42.2
Q ss_pred CeEEEeCCc-ccchhhhhc--CCC----eEEEEcCCHHHHHhCCCCCceEEe-ecccccCCCCCCCceeEEEecchhhcc
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYK----RVVGHGLNAQELAKNPRLEYFIVK-DLNQDQKLEFDHCSFDAVVCAVSVQYL 170 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~----~v~giD~s~~~l~~~~~~~~~~~~-d~~~~~~l~~~~~s~D~v~~~~~l~~~ 170 (282)
.+|.=|||| .|..++... .+. +|++.|.+++.++........... +. .+. -...|+|+.+-- .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~---~e~---~~~aDvVilav~---~ 73 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDN---NEV---AKNADILILSIK---P 73 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCH---HHH---HHHCSEEEECSC---T
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCCh---HHH---HHhCCEEEEEeC---H
Confidence 467889998 344433322 343 899999998766443211011111 11 110 123677776542 2
Q ss_pred CCHHHHHHHHHHcccCCcEEE
Q 023470 171 QQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 171 ~~~~~~l~~~~r~LkpgG~li 191 (282)
.....+++++...++||..++
T Consensus 74 ~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 74 DLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp TTHHHHC---CCSSCTTCEEE
T ss_pred HHHHHHHHHHHhhcCCCCEEE
Confidence 244566677777777665433
No 457
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=44.81 E-value=19 Score=30.52 Aligned_cols=85 Identities=15% Similarity=0.000 Sum_probs=46.9
Q ss_pred eEEEeCCc-ccchhhhhc--CCCeEEEEcC--CHHHHHhCCCCC---c-------eEEeecccccCCCCCCCceeEEEec
Q 023470 100 EVLDLMSS-WVSHLPQEV--SYKRVVGHGL--NAQELAKNPRLE---Y-------FIVKDLNQDQKLEFDHCSFDAVVCA 164 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~~~v~giD~--s~~~l~~~~~~~---~-------~~~~d~~~~~~l~~~~~s~D~v~~~ 164 (282)
+|.=||+| .|..++... .+.+|+.+|. +++.++...... . ....+. +++.-.-...|+|+.+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP---EQLEKCLENAEVVLLG 78 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG---GGHHHHHTTCSEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecH---HhHHHHHhcCCEEEEc
Confidence 57779998 455444332 4579999999 877654322111 0 011110 0111001347888876
Q ss_pred chhhccCCHHHHHHHHHHcccCCcEEE
Q 023470 165 VSVQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 165 ~~l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
---. ....+++++.. |+||..++
T Consensus 79 v~~~---~~~~v~~~i~~-l~~~~~vv 101 (335)
T 1txg_A 79 VSTD---GVLPVMSRILP-YLKDQYIV 101 (335)
T ss_dssp SCGG---GHHHHHHHHTT-TCCSCEEE
T ss_pred CChH---HHHHHHHHHhc-CCCCCEEE
Confidence 4333 34667888888 88876543
No 458
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=44.80 E-value=39 Score=30.47 Aligned_cols=88 Identities=22% Similarity=0.178 Sum_probs=49.5
Q ss_pred CeEEEeCCcc-cchhhhhc--CCCeEEEEcCCHHHHHhCCCC---------------------CceEEeecccccCCCCC
Q 023470 99 SEVLDLMSSW-VSHLPQEV--SYKRVVGHGLNAQELAKNPRL---------------------EYFIVKDLNQDQKLEFD 154 (282)
Q Consensus 99 ~~vLDiGcG~-~~~~~~~~--~~~~v~giD~s~~~l~~~~~~---------------------~~~~~~d~~~~~~l~~~ 154 (282)
.+|.=||+|. |..++... .+.+|+.+|.+++.++.+... ....+ . .++. .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i--~---~~~~-~ 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF--S---SSTK-E 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE--E---SCGG-G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh--c---CCHH-H
Confidence 4688999983 44443322 567999999998766432210 00111 1 1111 0
Q ss_pred CCceeEEEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 155 HCSFDAVVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 155 ~~s~D~v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
-...|+|+.+-. +...-...+++++...++||..++.+
T Consensus 112 ~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 112 LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 134688777542 11111245888888899988766543
No 459
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=44.72 E-value=16 Score=30.43 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=44.6
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEe-ecccccCCCCCCCceeEEEecch-hhccCC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVK-DLNQDQKLEFDHCSFDAVVCAVS-VQYLQQ 172 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~-d~~~~~~l~~~~~s~D~v~~~~~-l~~~~~ 172 (282)
..+|.=|||| .|..++... .+.+|+++|.+++.++...... .... +. .+. . ...|+|+.+-. -.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-~~~~~~~---~~~-~--~~~D~vi~~vp~~~~~-- 74 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-AQACENN---QKV-A--AASDIIFTSLPNAGIV-- 74 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-CEECSSH---HHH-H--HHCSEEEECCSSHHHH--
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-CeecCCH---HHH-H--hCCCEEEEECCCHHHH--
Confidence 3578889998 454443322 4579999999987665432221 1111 11 111 1 23688877541 1122
Q ss_pred HHHHHH---HHHHcccCCcEEE
Q 023470 173 PEKVFA---EVFRVLKPGGVFI 191 (282)
Q Consensus 173 ~~~~l~---~~~r~LkpgG~li 191 (282)
+.++. ++...|++|..++
T Consensus 75 -~~v~~~~~~l~~~l~~~~~vv 95 (301)
T 3cky_A 75 -ETVMNGPGGVLSACKAGTVIV 95 (301)
T ss_dssp -HHHHHSTTCHHHHSCTTCEEE
T ss_pred -HHHHcCcchHhhcCCCCCEEE
Confidence 33443 5666777766443
No 460
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=44.24 E-value=26 Score=31.95 Aligned_cols=84 Identities=13% Similarity=-0.049 Sum_probs=48.3
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.+.+|.=+|.| .|..++... -+.+|+++|+++.....+.... +.+.++ .++ -...|+|+..-.-.++-+
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g-~~~~~l---~el---l~~aDiVi~~~~t~~lI~- 327 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEG-FNVVTL---DEI---VDKGDFFITCTGNVDVIK- 327 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTT-CEECCH---HHH---TTTCSEEEECCSSSSSBC-
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcC-CEecCH---HHH---HhcCCEEEECCChhhhcC-
Confidence 57889999998 344444332 3689999999986532211111 122222 121 134788888743333322
Q ss_pred HHHHHHHHHcccCCcEEEE
Q 023470 174 EKVFAEVFRVLKPGGVFIV 192 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~ 192 (282)
.+....+|||+.++-
T Consensus 328 ----~~~l~~MK~gailiN 342 (479)
T 1v8b_A 328 ----LEHLLKMKNNAVVGN 342 (479)
T ss_dssp ----HHHHTTCCTTCEEEE
T ss_pred ----HHHHhhcCCCcEEEE
Confidence 356677899876653
No 461
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=44.01 E-value=50 Score=27.18 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=48.0
Q ss_pred CeEEEeCCc-ccchhhhhc---C-CCeEEEEcCCHHHHHhCCCCCc--eEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 99 SEVLDLMSS-WVSHLPQEV---S-YKRVVGHGLNAQELAKNPRLEY--FIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~---~-~~~v~giD~s~~~l~~~~~~~~--~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
.+|.=|||| .|..++... + +.+|+++|.+++.++....... ....+. .+. -...|+|+.+--....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~---~~~---~~~aDvVilavp~~~~- 79 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADF---KVF---AALADVIILAVPIKKT- 79 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCT---TTT---GGGCSEEEECSCHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCH---HHh---hcCCCEEEEcCCHHHH-
Confidence 578889998 344433322 2 5789999999876644322111 111121 111 1357888886543332
Q ss_pred CHHHHHHHHHHc-ccCCcEEE
Q 023470 172 QPEKVFAEVFRV-LKPGGVFI 191 (282)
Q Consensus 172 ~~~~~l~~~~r~-LkpgG~li 191 (282)
..+++++... |++|..++
T Consensus 80 --~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 80 --IDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp --HHHHHHHHTSCCCTTCEEE
T ss_pred --HHHHHHHHhcCCCCCCEEE
Confidence 5677888777 88775544
No 462
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=43.92 E-value=32 Score=30.16 Aligned_cols=93 Identities=10% Similarity=0.014 Sum_probs=51.8
Q ss_pred CCCCeEEEeCCcc-cchhhhhc--C-CCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 96 RPGSEVLDLMSSW-VSHLPQEV--S-YKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 96 ~~~~~vLDiGcG~-~~~~~~~~--~-~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
..+.+|+-.|+|. |..+.... . ..-...+|.++....+--.-....+..- +.+. +...|.|+.. ...+
T Consensus 317 ~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p---~~~~--~~~~d~vl~~-~~~~-- 388 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPA---SAFS--DPYPDYALLF-AWNH-- 388 (416)
T ss_dssp HTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEG---GGCC--SSCCSEEEES-CGGG--
T ss_pred HcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCH---HHHh--hcCCCEEEEe-cchh--
Confidence 3577899999973 44443322 1 2223457887753322111112333333 3332 3456765553 2222
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
.+++++.+...+.-||++++.+|..
T Consensus 389 -~~ei~~~~~~~~~~g~~~~~~~p~~ 413 (416)
T 4e2x_A 389 -AEEIMAKEQEFHQAGGRWILYVPEV 413 (416)
T ss_dssp -HHHHHHHCHHHHHTTCEEEECSSSC
T ss_pred -HHHHHHHHHHHHhcCCEEEEECCce
Confidence 4667788888888899999987753
No 463
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=43.72 E-value=20 Score=30.41 Aligned_cols=72 Identities=8% Similarity=0.007 Sum_probs=43.5
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHhC-------CC--CCceEEeecccccCCC-------CCCC
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAKN-------PR--LEYFIVKDLNQDQKLE-------FDHC 156 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~~-------~~--~~~~~~~d~~~~~~l~-------~~~~ 156 (282)
.+.+||=.|+ |.|..++..+ .+.+|++++.+.+.++.. .. ...+..+|+.....+. -.-+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 3567888998 5666655543 678999999998654321 11 2345666764321110 0114
Q ss_pred ceeEEEecchhh
Q 023470 157 SFDAVVCAVSVQ 168 (282)
Q Consensus 157 s~D~v~~~~~l~ 168 (282)
.+|+++.+-.+.
T Consensus 87 ~id~lv~nAg~~ 98 (319)
T 3ioy_A 87 PVSILCNNAGVN 98 (319)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999986643
No 464
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=43.70 E-value=18 Score=29.46 Aligned_cols=79 Identities=19% Similarity=0.170 Sum_probs=44.8
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHh-----CC----CCCceEEeecccccCCC--C-----CCC
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAK-----NP----RLEYFIVKDLNQDQKLE--F-----DHC 156 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~-----~~----~~~~~~~~d~~~~~~l~--~-----~~~ 156 (282)
.+.+||=.|+ |.|..++..+ .+.+|+++|.+++.++. .. ....+..+|+.....+. + .-+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 3567888898 4566555443 67899999998764421 11 11234566664321110 0 013
Q ss_pred ceeEEEecchhhccCCHHH
Q 023470 157 SFDAVVCAVSVQYLQQPEK 175 (282)
Q Consensus 157 s~D~v~~~~~l~~~~~~~~ 175 (282)
.+|+++.+-.+....+.+.
T Consensus 86 ~id~lv~~Ag~~~~~~~~~ 104 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEK 104 (267)
T ss_dssp CCCEEEECCCCCCSSSHHH
T ss_pred CCCEEEECCCCCChhhHHH
Confidence 5799999876544444443
No 465
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=43.13 E-value=12 Score=31.69 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=20.2
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.++.+|..+..+|+|||++++..-|
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC
Confidence 4566899999999999999765443
No 466
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=42.87 E-value=5.8 Score=34.50 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=47.9
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCHH
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
..+|.=||+| +|..++... .+.+|++.|.+++.++.+.........+.. +.+.-.....|+|+.+--... ..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~--e~~~~a~~~aDlVilavP~~~---~~ 82 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLE--ATLQRAAAEDALIVLAVPMTA---ID 82 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHH--HHHHHHHHTTCEEEECSCHHH---HH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHH--HHHHhcccCCCEEEEeCCHHH---HH
Confidence 3568889998 454444332 467999999999877654332211111110 001000012488887654332 24
Q ss_pred HHHHHHHHcccCCcEEEEEE
Q 023470 175 KVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 175 ~~l~~~~r~LkpgG~li~~~ 194 (282)
.+++++... +||. +++.+
T Consensus 83 ~vl~~l~~~-~~~~-iv~Dv 100 (341)
T 3ktd_A 83 SLLDAVHTH-APNN-GFTDV 100 (341)
T ss_dssp HHHHHHHHH-CTTC-CEEEC
T ss_pred HHHHHHHcc-CCCC-EEEEc
Confidence 567777664 7764 44443
No 467
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=42.80 E-value=36 Score=30.48 Aligned_cols=36 Identities=6% Similarity=-0.166 Sum_probs=25.0
Q ss_pred CCeEEEeCCc-ccchhhhhc-CCCeEEEEcCCHHHHHh
Q 023470 98 GSEVLDLMSS-WVSHLPQEV-SYKRVVGHGLNAQELAK 133 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~-~~~~v~giD~s~~~l~~ 133 (282)
-++|-=||+| +|..++..+ .+.+|+++|++++.++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~~v~~ 73 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQNHEVVALDIVQAKVDM 73 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHHHhhH
Confidence 3578889998 344333221 37899999999987654
No 468
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=41.67 E-value=50 Score=27.87 Aligned_cols=95 Identities=11% Similarity=0.008 Sum_probs=51.4
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCC-ceE------EeecccccCCCCCCCceeEEEecch
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLE-YFI------VKDLNQDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~-~~~------~~d~~~~~~l~~~~~s~D~v~~~~~ 166 (282)
...+|.=||+| +|..++... .+.+|+.+ .+++.++..+... ... ...+....+... -..+|+|+.+--
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilavk 95 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCVK 95 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECCC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEcc
Confidence 35689999998 555544432 56789999 8876654322111 000 000000011111 145788887643
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEEEEEcCc
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR 197 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 197 (282)
-. +...+++.+...|+|+..++ +..+.
T Consensus 96 ~~---~~~~~l~~l~~~l~~~~~iv-~~~nG 122 (318)
T 3hwr_A 96 ST---DTQSAALAMKPALAKSALVL-SLQNG 122 (318)
T ss_dssp GG---GHHHHHHHHTTTSCTTCEEE-EECSS
T ss_pred cc---cHHHHHHHHHHhcCCCCEEE-EeCCC
Confidence 22 34778888988898876544 44443
No 469
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=41.67 E-value=28 Score=27.46 Aligned_cols=71 Identities=18% Similarity=0.144 Sum_probs=40.4
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
...+|.=||+| .|..++... .+.+|+.+|.+++ . -...|+|+.+---. ..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~--------------~----------~~~aD~vi~av~~~---~~ 70 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ--------------A----------TTLGEIVIMAVPYP---AL 70 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC--------------C----------SSCCSEEEECSCHH---HH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH--------------H----------hccCCEEEEcCCcH---HH
Confidence 45679999998 455444332 4568988887654 0 12357777653311 22
Q ss_pred HHHHHHHHHcccCCcEEEEEEcC
Q 023470 174 EKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
..+++++...++ |.+++++.+
T Consensus 71 ~~v~~~l~~~~~--~~~vi~~~~ 91 (209)
T 2raf_A 71 AALAKQYATQLK--GKIVVDITN 91 (209)
T ss_dssp HHHHHHTHHHHT--TSEEEECCC
T ss_pred HHHHHHHHHhcC--CCEEEEECC
Confidence 456666666666 455555443
No 470
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=41.35 E-value=33 Score=28.53 Aligned_cols=97 Identities=22% Similarity=0.193 Sum_probs=54.7
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHH-H-------HhCCCCCceEEeecccccCCC--C-----CCCc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQE-L-------AKNPRLEYFIVKDLNQDQKLE--F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~-l-------~~~~~~~~~~~~d~~~~~~l~--~-----~~~s 157 (282)
.+.+||=.|+ |.|..++..+ .+.+|+.+|.+.+. . +.......+..+|+.....+. + .-+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4567888888 4566555443 67899999887432 1 112223345666764321110 0 1136
Q ss_pred eeEEEecchhhccC------CH---H-----------HHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQ------QP---E-----------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~------~~---~-----------~~l~~~~r~LkpgG~li~~ 193 (282)
.|+++.+-...+.. +. + .+++.+.+.++.+|.+++.
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 89999885432211 11 1 1456677778888987765
No 471
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=40.85 E-value=40 Score=30.68 Aligned_cols=33 Identities=15% Similarity=0.010 Sum_probs=23.7
Q ss_pred CCCeEEEeCCc-ccchhhhhc--C-CC-eEEEEcCCHH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--S-YK-RVVGHGLNAQ 129 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~-~~-~v~giD~s~~ 129 (282)
+-++|-=||+| +|..++..+ . +. +|+++|++++
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 45678889998 454444332 4 67 9999999988
No 472
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=40.68 E-value=13 Score=32.26 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.++.+|..+..+|+|||++++..-|
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecC
Confidence 4566899999999999999876544
No 473
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=40.44 E-value=9.7 Score=32.28 Aligned_cols=35 Identities=11% Similarity=-0.144 Sum_probs=24.7
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHH
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELA 132 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~ 132 (282)
.++|.=||+| .|..++... .+.+|++.|.+++.++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 58 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCD 58 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4678889998 455444332 5679999999986554
No 474
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=39.82 E-value=41 Score=30.77 Aligned_cols=83 Identities=8% Similarity=-0.040 Sum_probs=47.5
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
.+.+|.=+|.| .|..++... -+.+|+++|+++.....+... .+...++ .++ -...|+|+..-.-.++-+
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~-G~~~~~l---~el---l~~aDiVi~~~~t~~lI~- 347 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAME-GYRVVTM---EYA---ADKADIFVTATGNYHVIN- 347 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTT-TCEECCH---HHH---TTTCSEEEECSSSSCSBC-
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHc-CCEeCCH---HHH---HhcCCEEEECCCcccccC-
Confidence 57889999998 454444332 468999999998643211111 1122222 121 134788888742223222
Q ss_pred HHHHHHHHHcccCCcEEE
Q 023470 174 EKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 174 ~~~l~~~~r~LkpgG~li 191 (282)
++....+|||..++
T Consensus 348 ----~~~l~~MK~gAilI 361 (494)
T 3d64_A 348 ----HDHMKAMRHNAIVC 361 (494)
T ss_dssp ----HHHHHHCCTTEEEE
T ss_pred ----HHHHhhCCCCcEEE
Confidence 45667789876665
No 475
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=39.72 E-value=24 Score=29.37 Aligned_cols=89 Identities=16% Similarity=0.077 Sum_probs=49.3
Q ss_pred CeEEEeCCc-ccchhhhhc--CCC---eEEEEcCCHHHHHhCCCCCceEEe-ecccccCCCCCCCceeEEEecchhhccC
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYK---RVVGHGLNAQELAKNPRLEYFIVK-DLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~---~v~giD~s~~~l~~~~~~~~~~~~-d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
.+|.=|||| .|..++... .+. +|+.+|.+++.++........... +.. +.+ ...|+|+..---+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~--~~~----~~aDvVilav~p~--- 74 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNR--QGA----LNADVVVLAVKPH--- 74 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHH--HHH----SSCSEEEECSCGG---
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChH--HHH----hcCCeEEEEeCHH---
Confidence 568889998 344433322 334 899999998766543322111111 110 111 2368888765322
Q ss_pred CHHHHHHHHHHc-ccCCcEEEEEEcCc
Q 023470 172 QPEKVFAEVFRV-LKPGGVFIVSFSNR 197 (282)
Q Consensus 172 ~~~~~l~~~~r~-LkpgG~li~~~~~~ 197 (282)
....+++++... ++++ .+++++...
T Consensus 75 ~~~~vl~~l~~~~l~~~-~iiiS~~ag 100 (280)
T 3tri_A 75 QIKMVCEELKDILSETK-ILVISLAVG 100 (280)
T ss_dssp GHHHHHHHHHHHHHTTT-CEEEECCTT
T ss_pred HHHHHHHHHHhhccCCC-eEEEEecCC
Confidence 346788888877 7655 455565443
No 476
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.18 E-value=45 Score=28.16 Aligned_cols=92 Identities=8% Similarity=-0.049 Sum_probs=48.1
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHH-HHHhCC------CCCceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQ-ELAKNP------RLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~-~l~~~~------~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
++|+=||+| +|..++... .+.+|+.++.++. .+.... ....+....+....+.......+|+|+.+-=-.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 578889998 555444332 5679999998862 221110 011111100100011111123689988864333
Q ss_pred ccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 169 YLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 169 ~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
.+ ..+++.+...++++..++..
T Consensus 83 ~~---~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 83 EG---ADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp TT---CCHHHHHTTSCCTTCEEEEE
T ss_pred Ch---HHHHHHHHhhcCCCCEEEEe
Confidence 33 35778888888888765543
No 477
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=38.59 E-value=20 Score=32.19 Aligned_cols=35 Identities=11% Similarity=-0.080 Sum_probs=24.9
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHH
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQEL 131 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l 131 (282)
.+.+|.=+|+| .|..++... -+.+|+++|+++...
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a 247 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINA 247 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhh
Confidence 57889999998 344443332 467999999998544
No 478
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=38.11 E-value=38 Score=30.46 Aligned_cols=97 Identities=13% Similarity=-0.058 Sum_probs=51.4
Q ss_pred CCCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCC-CceEE-------------eecccccCCCCCCCcee
Q 023470 97 PGSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRL-EYFIV-------------KDLNQDQKLEFDHCSFD 159 (282)
Q Consensus 97 ~~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~-~~~~~-------------~d~~~~~~l~~~~~s~D 159 (282)
...+|-=||+| +|..++..+ .+.+|+++|++++.++.-+.. ..... ..+....++.-.-...|
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 34577888998 455444432 578999999998766532221 10000 00000011100012357
Q ss_pred EEEecc-h-h---hccCC---HHHHHHHHHHcccCCcEEEEE
Q 023470 160 AVVCAV-S-V---QYLQQ---PEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 160 ~v~~~~-~-l---~~~~~---~~~~l~~~~r~LkpgG~li~~ 193 (282)
+|+.+- + . ..-+| .+.+++.+...|++|-.++..
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ 128 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK 128 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 777652 1 1 11122 456788899999998776653
No 479
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=38.00 E-value=17 Score=31.40 Aligned_cols=63 Identities=13% Similarity=0.187 Sum_probs=37.2
Q ss_pred CeEEEeCCcccch-hhh-hcCC--CeEEEEcCCHHHHHhCC---CCCceEEeecccccCCC---CCCCceeEEEec
Q 023470 99 SEVLDLMSSWVSH-LPQ-EVSY--KRVVGHGLNAQELAKNP---RLEYFIVKDLNQDQKLE---FDHCSFDAVVCA 164 (282)
Q Consensus 99 ~~vLDiGcG~~~~-~~~-~~~~--~~v~giD~s~~~l~~~~---~~~~~~~~d~~~~~~l~---~~~~s~D~v~~~ 164 (282)
.+++|+-||.|.. +.. ..+. ..|.++|+++.+.+.-+ ........|+. ++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~---~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQ---QLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGG---GCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccc---cCCHHHhccCCCCEEEec
Confidence 4799999986543 222 2232 45789999998775322 22234556663 332 222358999876
No 480
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=37.82 E-value=18 Score=40.02 Aligned_cols=93 Identities=19% Similarity=0.125 Sum_probs=54.2
Q ss_pred hCCCCCeEEEeCC-c-ccchhhh--hcCCCeEEEEcCCHHHHHhCCC----CCceEEeecccc---cC-CCC-CCCceeE
Q 023470 94 MLRPGSEVLDLMS-S-WVSHLPQ--EVSYKRVVGHGLNAQELAKNPR----LEYFIVKDLNQD---QK-LEF-DHCSFDA 160 (282)
Q Consensus 94 ~~~~~~~vLDiGc-G-~~~~~~~--~~~~~~v~giD~s~~~l~~~~~----~~~~~~~d~~~~---~~-l~~-~~~s~D~ 160 (282)
.++++.+||=.|+ | .|....+ ...+.+|++++.+++..+..+. ...-.+.+.... .. ... ....+|+
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDv 1743 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDL 1743 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEE
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceE
Confidence 4568899999975 5 3433222 1256799999998765543321 111111121110 00 011 1235999
Q ss_pred EEecchhhccCCHHHHHHHHHHcccCCcEEEEE
Q 023470 161 VVCAVSVQYLQQPEKVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 161 v~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 193 (282)
|+-+.. ...+....++|+|||+++..
T Consensus 1744 Vld~~g-------~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1744 VLNSLA-------EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp EEECCC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred EEECCC-------chHHHHHHHhcCCCcEEEEe
Confidence 987542 45689999999999998754
No 481
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=37.49 E-value=18 Score=30.66 Aligned_cols=85 Identities=9% Similarity=0.014 Sum_probs=45.9
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCC-eEEEEcCC--HHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccC
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYK-RVVGHGLN--AQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~-~v~giD~s--~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
..+|.=||+| .|..++... .+. +|++.|.+ ++..+......-....+. .+. -...|+|+.+---.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~---~e~---~~~aDvVi~~vp~~--- 94 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASV---AEV---AGECDVIFSLVTAQ--- 94 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCH---HHH---HHHCSEEEECSCTT---
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCH---HHH---HhcCCEEEEecCch---
Confidence 3678899998 454444332 345 99999996 454443222111111111 111 12368887753221
Q ss_pred CHHHHHHHHHHcccCCcEEE
Q 023470 172 QPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li 191 (282)
...+.++++...|++|..++
T Consensus 95 ~~~~~~~~l~~~l~~~~ivv 114 (312)
T 3qsg_A 95 AALEVAQQAGPHLCEGALYA 114 (312)
T ss_dssp THHHHHHHHGGGCCTTCEEE
T ss_pred hHHHHHHhhHhhcCCCCEEE
Confidence 22346788888888876554
No 482
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.94 E-value=25 Score=27.60 Aligned_cols=69 Identities=10% Similarity=0.017 Sum_probs=40.9
Q ss_pred eEEEeCC-c-ccchhhhh---cCCCeEEEEcCCHH-HHHh---CCCCCceEEeecccccCCCCCCCceeEEEecchhh
Q 023470 100 EVLDLMS-S-WVSHLPQE---VSYKRVVGHGLNAQ-ELAK---NPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQ 168 (282)
Q Consensus 100 ~vLDiGc-G-~~~~~~~~---~~~~~v~giD~s~~-~l~~---~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~ 168 (282)
+||=.|+ | .|..+... ..+.+|++++.+++ .++. ......+..+|+.....+.-.-..+|+|+.+....
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 4888896 3 55544332 26789999999987 5432 23344566777743222210012579999887643
No 483
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=36.65 E-value=17 Score=31.56 Aligned_cols=91 Identities=8% Similarity=0.054 Sum_probs=49.0
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCC---CCCceEEe-ecc----cccCCCCCCCceeEEEecch
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNP---RLEYFIVK-DLN----QDQKLEFDHCSFDAVVCAVS 166 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~---~~~~~~~~-d~~----~~~~l~~~~~s~D~v~~~~~ 166 (282)
.++|.=||+| +|..++... .+.+|+.+|.+++.++..+ .+..+.-. .+. ...++.-.-...|+|+..--
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 4679999998 565554432 5678999999987654221 11100000 000 00111000124688876532
Q ss_pred hhccCCHHHHHHHHHHcccCCcEEE
Q 023470 167 VQYLQQPEKVFAEVFRVLKPGGVFI 191 (282)
Q Consensus 167 l~~~~~~~~~l~~~~r~LkpgG~li 191 (282)
-. ....+++++...|+|+-.++
T Consensus 109 ~~---~~~~vl~~i~~~l~~~~ivv 130 (356)
T 3k96_A 109 SF---AFHEVITRMKPLIDAKTRIA 130 (356)
T ss_dssp HH---HHHHHHHHHGGGCCTTCEEE
T ss_pred HH---HHHHHHHHHHHhcCCCCEEE
Confidence 22 34668888888888876544
No 484
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.34 E-value=36 Score=27.79 Aligned_cols=97 Identities=21% Similarity=0.181 Sum_probs=54.8
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCC-HHHHH-------hCCCCCceEEeecccccCCC--C-----CCCc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLN-AQELA-------KNPRLEYFIVKDLNQDQKLE--F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s-~~~l~-------~~~~~~~~~~~d~~~~~~l~--~-----~~~s 157 (282)
.+.++|=.|+ |.|..++..+ .+.+|+.++.. .+.++ .......+..+|+.....+. + .-+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3567888888 4566555443 67899887764 33221 12233455667764321110 0 0136
Q ss_pred eeEEEecchhhccC-----CHH--------------HHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQ-----QPE--------------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~-----~~~--------------~~l~~~~r~LkpgG~li~~ 193 (282)
.|+++.+-.+.... +.+ .+.+.+.+.++.+|.+++.
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 89999886543321 111 1456777788889988765
No 485
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=35.71 E-value=7.1 Score=32.84 Aligned_cols=89 Identities=17% Similarity=0.139 Sum_probs=47.7
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCc--e-EEeecccccCCCCCCCceeEEEecchhhccCC
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEY--F-IVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQ 172 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~--~-~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~ 172 (282)
++|+=||+| +|..++... .+.+|+.++.+++.++....... . ...+.. +.+ ...+|+|+.+-=-. +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~--~~~---~~~~D~vilavk~~---~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGY--EDV---TNTFDVIIIAVKTH---Q 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEG--GGC---CSCEEEEEECSCGG---G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCch--Hhc---CCCCCEEEEeCCcc---C
Confidence 468889998 555444322 34688888887644332221111 0 111110 111 24689988763222 3
Q ss_pred HHHHHHHHHHcccCCcEEEEEEcC
Q 023470 173 PEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 173 ~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
.+.+++++...++++.. ++++.+
T Consensus 75 ~~~~l~~l~~~l~~~~~-iv~~~n 97 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTL-IILAQN 97 (294)
T ss_dssp HHHHGGGHHHHEEEEEE-EEECCS
T ss_pred HHHHHHHHHHhhCCCCE-EEEecc
Confidence 46677888888876654 445444
No 486
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=34.98 E-value=45 Score=27.68 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=54.4
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCH--HHH-------HhCCCCCceEEeecccccCCC-------CCCC
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNA--QEL-------AKNPRLEYFIVKDLNQDQKLE-------FDHC 156 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~--~~l-------~~~~~~~~~~~~d~~~~~~l~-------~~~~ 156 (282)
.+.++|=.|+ |.|..++..+ .+.+|+.+|.+. ... +.......+..+|+.....+. -.-+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567888888 4666555443 678999988862 222 122223344555653321110 0014
Q ss_pred ceeEEEecchhhcc-C-----CHH--------------HHHHHHHHcccCCcEEEEE
Q 023470 157 SFDAVVCAVSVQYL-Q-----QPE--------------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 157 s~D~v~~~~~l~~~-~-----~~~--------------~~l~~~~r~LkpgG~li~~ 193 (282)
..|+++.+-.+... . +.+ .+++.+...++.+|.+++.
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 68999988654321 1 111 1456677778888988765
No 487
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=34.67 E-value=27 Score=28.75 Aligned_cols=83 Identities=5% Similarity=-0.063 Sum_probs=43.5
Q ss_pred eEEEeCCc-ccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCHHHHH
Q 023470 100 EVLDLMSS-WVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPEKVF 177 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~~~l 177 (282)
+|.=|||| .|..++... .+.+|+.+|.+++.++...... ....+. .+. -...|+|+.+---.. ..+.++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~~~~~~~~~~g-~~~~~~---~~~---~~~~D~vi~~v~~~~--~~~~v~ 73 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLARRFPTLVWNRTFEKALRHQEEF-GSEAVP---LER---VAEARVIFTCLPTTR--EVYEVA 73 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHTTSCEEEECSSTHHHHHHHHHH-CCEECC---GGG---GGGCSEEEECCSSHH--HHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHCC-CcccCH---HHH---HhCCCEEEEeCCChH--HHHHHH
Confidence 57778998 344433221 1568999999876554321111 111111 111 134788887532110 123466
Q ss_pred HHHHHcccCCcEEE
Q 023470 178 AEVFRVLKPGGVFI 191 (282)
Q Consensus 178 ~~~~r~LkpgG~li 191 (282)
+++...|++|..++
T Consensus 74 ~~l~~~l~~~~~vv 87 (289)
T 2cvz_A 74 EALYPYLREGTYWV 87 (289)
T ss_dssp HHHTTTCCTTEEEE
T ss_pred HHHHhhCCCCCEEE
Confidence 77777788776544
No 488
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=34.21 E-value=18 Score=29.26 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=53.6
Q ss_pred CCCeEEEeCC--cccchhhhhc---CCCeEEEEcCCHHHHHh-------CCCCCceEEeecccccCCC--C-----CCCc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV---SYKRVVGHGLNAQELAK-------NPRLEYFIVKDLNQDQKLE--F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~---~~~~v~giD~s~~~l~~-------~~~~~~~~~~d~~~~~~l~--~-----~~~s 157 (282)
++.+||=.|+ |.|..++..+ .+.+|++++.+...+.. ......+..+|+.....+. + .-+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4567888888 4565554432 46799999998654321 1223456677764321110 0 0136
Q ss_pred eeEEEecchhhccC--------CHH-----------HHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQ--------QPE-----------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~--------~~~-----------~~l~~~~r~LkpgG~li~~ 193 (282)
+|+|+.+-...... +.+ .+++.+...++++|++++.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 89999885433211 111 1445566666667787765
No 489
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=34.10 E-value=60 Score=29.81 Aligned_cols=93 Identities=5% Similarity=-0.032 Sum_probs=59.9
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCC-CCCCceeEEEecchhhccCCHH
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLE-FDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~-~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
.+|+=+|+| .|..++... .+..|+.+|.+++.++.. .....+|....+.|. ..-..+|++++... +.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---~~~i~gD~t~~~~L~~agi~~ad~vi~~~~-----~d~ 420 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---HVVVYGDATVGQTLRQAGIDRASGIIVTTN-----DDS 420 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---SCEEESCSSSSTHHHHHTTTSCSEEEECCS-----CHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---CCEEEeCCCCHHHHHhcCccccCEEEEECC-----Cch
Confidence 789999998 455555443 678999999998765443 266777775432221 12356888888654 333
Q ss_pred H--HHHHHHHcccCCcEEEEEEcCchh
Q 023470 175 K--VFAEVFRVLKPGGVFIVSFSNRMF 199 (282)
Q Consensus 175 ~--~l~~~~r~LkpgG~li~~~~~~~~ 199 (282)
. ......|-|.|.-.++.-..++..
T Consensus 421 ~ni~~~~~ak~l~~~~~iiar~~~~~~ 447 (565)
T 4gx0_A 421 TNIFLTLACRHLHSHIRIVARANGEEN 447 (565)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEESSTTS
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 3 555667777787777766655433
No 490
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.05 E-value=86 Score=26.23 Aligned_cols=100 Identities=15% Similarity=0.033 Sum_probs=50.5
Q ss_pred CeEEEeCCc-ccchhhhhc-CCCeEEEEcCCHHHHHhCCCCCceEEeeccc----c-cCCCCCCCceeEEEecchhhccC
Q 023470 99 SEVLDLMSS-WVSHLPQEV-SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQ----D-QKLEFDHCSFDAVVCAVSVQYLQ 171 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~-~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~----~-~~l~~~~~s~D~v~~~~~l~~~~ 171 (282)
++|+=|||| +|..++... .+.+|+.++.+++.++..++.. +....... . .........+|+|+.+-=-.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~~~~~~l~~~G-~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~--- 78 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQEQAAAIQSEG-IRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH--- 78 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCHHHHHHHHHHC-EEEEETTEEEEECCEEESSCCSCCSEEEECCCGG---
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECCHHHHHHHHhCC-ceEecCCCeecccccccccccCCCCEEEEEeCHH---
Confidence 578899998 454443221 5679999999986543222111 11110000 0 00011235689988763222
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEcCchhHHHHHH
Q 023470 172 QPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAIS 205 (282)
Q Consensus 172 ~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~ 205 (282)
+.+.++..+... +++. ++++.|..-..+...
T Consensus 79 ~~~~~l~~l~~~--~~~~-ivs~~nGi~~~e~l~ 109 (307)
T 3ego_A 79 QLQSVFSSLERI--GKTN-ILFLQNGMGHIHDLK 109 (307)
T ss_dssp GHHHHHHHTTSS--CCCE-EEECCSSSHHHHHHH
T ss_pred HHHHHHHHhhcC--CCCe-EEEecCCccHHHHHH
Confidence 235566666543 3455 677666544443333
No 491
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=33.75 E-value=32 Score=28.34 Aligned_cols=97 Identities=21% Similarity=0.200 Sum_probs=52.7
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHH-H-------HhCCCCCceEEeecccccCCC--C-----CCCc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQE-L-------AKNPRLEYFIVKDLNQDQKLE--F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~-l-------~~~~~~~~~~~~d~~~~~~l~--~-----~~~s 157 (282)
.+.++|=.|+ |.|..++..+ .+.+|+.++.+... . ........+..+|+.....+. + .-+.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3567888888 4565554433 67899998877431 1 111223345566664321110 0 0136
Q ss_pred eeEEEecchhhccC-----CHH--------------HHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQ-----QPE--------------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~-----~~~--------------~~l~~~~r~LkpgG~li~~ 193 (282)
+|+++.+-.+.... +.+ .+++.+.+.++.+|++++.
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 89999886543221 111 1345666667777888765
No 492
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=33.68 E-value=2.2e+02 Score=24.24 Aligned_cols=44 Identities=7% Similarity=0.050 Sum_probs=27.8
Q ss_pred CCCCceeEEEecchhhccC--CHHHHHHHHHHcccCCcEEEEEEcC
Q 023470 153 FDHCSFDAVVCAVSVQYLQ--QPEKVFAEVFRVLKPGGVFIVSFSN 196 (282)
Q Consensus 153 ~~~~s~D~v~~~~~l~~~~--~~~~~l~~~~r~LkpgG~li~~~~~ 196 (282)
+..+.--++++-.++.+++ ....+|+.+.+...+|..++....+
T Consensus 187 ~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~ 232 (334)
T 3iei_A 187 MNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVN 232 (334)
T ss_dssp CCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECC
T ss_pred CCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEeccC
Confidence 3334455778888899996 3344888888776555445555433
No 493
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=32.90 E-value=77 Score=25.85 Aligned_cols=97 Identities=14% Similarity=0.100 Sum_probs=55.3
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCC-HHHH-------HhCCCCCceEEeecccccCCC--C-----CCCc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLN-AQEL-------AKNPRLEYFIVKDLNQDQKLE--F-----DHCS 157 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s-~~~l-------~~~~~~~~~~~~d~~~~~~l~--~-----~~~s 157 (282)
.+.++|=.|+ |.|..++..+ .+.+|+.+|.. .+.+ +.......+..+|+...+.+. + .-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4677898998 4666555443 67899888654 2222 122233445666764321110 0 0136
Q ss_pred eeEEEecchhhccC-----CH---H-----------HHHHHHHHcccCCcEEEEE
Q 023470 158 FDAVVCAVSVQYLQ-----QP---E-----------KVFAEVFRVLKPGGVFIVS 193 (282)
Q Consensus 158 ~D~v~~~~~l~~~~-----~~---~-----------~~l~~~~r~LkpgG~li~~ 193 (282)
.|+++.+-.+.... +. + .+++.+.+.++.+|.+++.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 89999886543221 11 1 1466677788888988765
No 494
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=32.54 E-value=9.2 Score=31.38 Aligned_cols=75 Identities=12% Similarity=0.013 Sum_probs=43.5
Q ss_pred CeEEEeCC--cccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCHH
Q 023470 99 SEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQPE 174 (282)
Q Consensus 99 ~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~~ 174 (282)
.+||=.|+ |.|..+...+ .+.+|+++|.++.... .....+..+|+.....+.---..+|+|+.+-......+.+
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~ 81 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFE 81 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHH
Confidence 46788887 3566655543 4678999998763222 2234566777743211110012589999987665555544
Q ss_pred H
Q 023470 175 K 175 (282)
Q Consensus 175 ~ 175 (282)
.
T Consensus 82 ~ 82 (267)
T 3rft_A 82 Q 82 (267)
T ss_dssp H
T ss_pred H
Confidence 4
No 495
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=32.40 E-value=72 Score=25.68 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=22.8
Q ss_pred eEEEeCCc-ccchhhhhc--CC-CeEEEEcCCHHHHHh
Q 023470 100 EVLDLMSS-WVSHLPQEV--SY-KRVVGHGLNAQELAK 133 (282)
Q Consensus 100 ~vLDiGcG-~~~~~~~~~--~~-~~v~giD~s~~~l~~ 133 (282)
+|.=|||| .|..++... .+ .+|+.+|.+++.++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~ 39 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRER 39 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHH
Confidence 57778998 454443322 34 789999999876543
No 496
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=32.34 E-value=95 Score=25.34 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=43.9
Q ss_pred CCCeEEEeCC--cccchhhhhc--CCCeEEEEcCCH--HH---HHhCCCCCceEEeecccccCC--CCCCCceeEEEecc
Q 023470 97 PGSEVLDLMS--SWVSHLPQEV--SYKRVVGHGLNA--QE---LAKNPRLEYFIVKDLNQDQKL--EFDHCSFDAVVCAV 165 (282)
Q Consensus 97 ~~~~vLDiGc--G~~~~~~~~~--~~~~v~giD~s~--~~---l~~~~~~~~~~~~d~~~~~~l--~~~~~s~D~v~~~~ 165 (282)
++..+|==|. |.|..++..+ .+.+|+.+|.+. +. ++..........+|+.+.... -+..+..|+++.+-
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 4566777777 5565544433 788999998873 22 233334445667777543211 13457899999986
Q ss_pred hhh
Q 023470 166 SVQ 168 (282)
Q Consensus 166 ~l~ 168 (282)
.+.
T Consensus 88 Gi~ 90 (247)
T 4hp8_A 88 GII 90 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 497
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=32.04 E-value=19 Score=32.63 Aligned_cols=89 Identities=8% Similarity=0.018 Sum_probs=45.4
Q ss_pred CeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCC---CceEEe-ecccccCCCCCCCceeEEEecchh-hcc
Q 023470 99 SEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRL---EYFIVK-DLNQDQKLEFDHCSFDAVVCAVSV-QYL 170 (282)
Q Consensus 99 ~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~---~~~~~~-d~~~~~~l~~~~~s~D~v~~~~~l-~~~ 170 (282)
.+|.=||+| +|..++... .+.+|++.|.+++.++..... ...... +. .++--.-+..|+|+.+--- .+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~---~e~v~~l~~aDvVilavp~~~~- 81 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTL---EEFVGSLEKPRRIMLMVQAGAA- 81 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSH---HHHHHTBCSSCEEEECCCTTHH-
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCH---HHHHhhccCCCEEEEEccCchH-
Confidence 467888998 455444332 466899999998765432111 011111 11 1110000136777765321 12
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEE
Q 023470 171 QQPEKVFAEVFRVLKPGGVFIVSF 194 (282)
Q Consensus 171 ~~~~~~l~~~~r~LkpgG~li~~~ 194 (282)
.+.+++++...|+||.. +++.
T Consensus 82 --v~~vl~~l~~~l~~g~i-iId~ 102 (474)
T 2iz1_A 82 --TDATIKSLLPLLDIGDI-LIDG 102 (474)
T ss_dssp --HHHHHHHHGGGCCTTCE-EEEC
T ss_pred --HHHHHHHHHhhCCCCCE-EEEC
Confidence 24566777777777654 4443
No 498
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.84 E-value=8.3 Score=30.51 Aligned_cols=69 Identities=13% Similarity=-0.021 Sum_probs=41.8
Q ss_pred CeEEEeCC-c-ccchhhhhc--CCCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 99 SEVLDLMS-S-WVSHLPQEV--SYKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 99 ~~vLDiGc-G-~~~~~~~~~--~~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
++||=.|+ | .|..+...+ .+.+|++++.++..+........+..+|+.....+.-.-..+|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 57999997 4 566554433 568999999997655433344456667764322221001247999887543
No 499
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=31.74 E-value=26 Score=27.84 Aligned_cols=70 Identities=16% Similarity=0.007 Sum_probs=42.8
Q ss_pred CCeEEEeCC-c-ccchhhhhc--C--CCeEEEEcCCHHHHHhCCCCCceEEeecccccCCCCCCCceeEEEecchh
Q 023470 98 GSEVLDLMS-S-WVSHLPQEV--S--YKRVVGHGLNAQELAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSV 167 (282)
Q Consensus 98 ~~~vLDiGc-G-~~~~~~~~~--~--~~~v~giD~s~~~l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l 167 (282)
+.+||=.|+ | .|..+...+ . +.+|++++.++..+........+..+|+.....+.---..+|+|+.+...
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 467888987 4 565554432 3 68999999998766544444556777774321111001247998887543
No 500
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=31.60 E-value=20 Score=30.82 Aligned_cols=84 Identities=17% Similarity=0.127 Sum_probs=46.3
Q ss_pred CCeEEEeCCc-ccchhhhhc--CCCeEEEEcCCHHH-HHhCCCCCceEEeecccccCCCCCCCceeEEEecchhhccCCH
Q 023470 98 GSEVLDLMSS-WVSHLPQEV--SYKRVVGHGLNAQE-LAKNPRLEYFIVKDLNQDQKLEFDHCSFDAVVCAVSVQYLQQP 173 (282)
Q Consensus 98 ~~~vLDiGcG-~~~~~~~~~--~~~~v~giD~s~~~-l~~~~~~~~~~~~d~~~~~~l~~~~~s~D~v~~~~~l~~~~~~ 173 (282)
+.+|.=|||| .|..++... .+.+|++.|.+++. .+.+.... +...+. .+. . ...|+|+..--....
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G-~~~~~~---~e~-~--~~aDvVilavp~~~~--- 85 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHG-LKVADV---KTA-V--AAADVVMILTPDEFQ--- 85 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTT-CEEECH---HHH-H--HTCSEEEECSCHHHH---
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCC-CEEccH---HHH-H--hcCCEEEEeCCcHHH---
Confidence 4578889998 354443322 45689999987643 33222111 111122 111 1 236888876432222
Q ss_pred HHHHH-HHHHcccCCcEEE
Q 023470 174 EKVFA-EVFRVLKPGGVFI 191 (282)
Q Consensus 174 ~~~l~-~~~r~LkpgG~li 191 (282)
..++. ++...|+||..++
T Consensus 86 ~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 86 GRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHHHHHHTGGGCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 45666 7777888887655
Done!