Query 023472
Match_columns 281
No_of_seqs 216 out of 1711
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 04:18:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023472.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023472hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2822 Sphingoid base-phospha 100.0 3.3E-44 7.2E-49 314.3 18.6 250 25-278 43-293 (407)
2 PLN02525 phosphatidic acid pho 100.0 1.1E-41 2.5E-46 306.3 25.3 214 65-278 8-221 (352)
3 cd03392 PAP2_like_2 PAP2_like_ 100.0 3.2E-28 7E-33 202.7 20.4 168 44-223 10-181 (182)
4 cd03388 PAP2_SPPase1 PAP2_like 100.0 2.2E-28 4.7E-33 197.7 17.9 149 60-216 1-149 (151)
5 cd03395 PAP2_like_4 PAP2_like_ 100.0 1.8E-27 4E-32 197.3 19.3 166 45-222 4-175 (177)
6 cd03389 PAP2_lipid_A_1_phospha 99.9 6E-26 1.3E-30 189.4 18.7 163 45-219 4-184 (186)
7 PRK11837 undecaprenyl pyrophos 99.9 2.8E-24 6E-29 181.1 19.4 164 45-225 4-176 (202)
8 cd03385 PAP2_BcrC_like PAP2_li 99.9 1.7E-23 3.6E-28 167.8 16.9 141 62-218 1-143 (144)
9 cd03391 PAP2_containing_2_like 99.9 3.6E-23 7.7E-28 168.3 18.0 143 60-216 11-157 (159)
10 cd03393 PAP2_like_3 PAP2_like_ 99.9 3.8E-24 8.3E-29 167.5 9.8 122 82-217 3-124 (125)
11 cd03381 PAP2_glucose_6_phospha 99.9 1.9E-22 4.2E-27 172.5 20.8 138 82-220 6-153 (235)
12 cd03382 PAP2_dolichyldiphospha 99.9 1.1E-22 2.3E-27 165.6 17.7 139 69-217 18-158 (159)
13 PRK09597 lipid A 1-phosphatase 99.9 1.7E-22 3.7E-27 165.4 15.9 138 57-219 49-186 (190)
14 PRK10699 phosphatidylglyceroph 99.9 5.7E-22 1.2E-26 169.8 16.3 161 58-225 33-234 (244)
15 cd03383 PAP2_diacylglycerolkin 99.9 2.4E-21 5.2E-26 147.0 13.6 99 93-219 9-107 (109)
16 cd03390 PAP2_containing_1_like 99.9 5.7E-21 1.2E-25 160.5 14.3 123 97-219 51-191 (193)
17 cd03394 PAP2_like_5 PAP2_like_ 99.9 5.8E-21 1.3E-25 145.1 11.3 103 91-216 2-104 (106)
18 cd03384 PAP2_wunen PAP2, wunen 99.8 2.4E-20 5.3E-25 150.2 13.6 123 94-216 6-148 (150)
19 cd03396 PAP2_like_6 PAP2_like_ 99.8 9.1E-20 2E-24 153.7 16.7 118 97-219 72-195 (197)
20 PLN02715 lipid phosphate phosp 99.8 2.7E-19 5.9E-24 159.5 18.1 124 97-220 128-267 (327)
21 PLN02250 lipid phosphate phosp 99.8 5.5E-19 1.2E-23 157.0 18.0 124 97-220 103-243 (314)
22 PLN02731 Putative lipid phosph 99.8 6.5E-19 1.4E-23 157.0 17.2 123 97-219 122-260 (333)
23 smart00014 acidPPc Acid phosph 99.8 1.2E-18 2.7E-23 134.4 12.6 111 100-216 3-114 (116)
24 cd01610 PAP2_like PAP2_like pr 99.8 3.4E-17 7.4E-22 126.3 14.1 113 98-217 9-121 (122)
25 PF01569 PAP2: PAP2 superfamil 99.7 8.9E-19 1.9E-23 137.2 3.8 124 96-224 4-127 (129)
26 cd03397 PAP2_acid_phosphatase 99.7 1.6E-16 3.5E-21 136.8 17.1 105 101-217 110-214 (232)
27 COG0671 PgpB Membrane-associat 99.7 2.1E-16 4.5E-21 134.0 16.9 120 95-225 94-215 (232)
28 KOG3146 Dolichyl pyrophosphate 99.7 3.5E-15 7.5E-20 122.1 17.4 125 93-226 56-181 (228)
29 cd03380 PAP2_like_1 PAP2_like_ 99.7 2.4E-15 5.2E-20 127.9 16.8 107 97-215 98-205 (209)
30 KOG3030 Lipid phosphate phosph 99.6 1.2E-14 2.6E-19 129.1 17.5 124 97-220 115-260 (317)
31 cd03386 PAP2_Aur1_like PAP2_li 99.6 6.1E-14 1.3E-18 117.1 19.2 149 58-217 22-182 (186)
32 KOG4268 Uncharacterized conser 99.6 4.7E-14 1E-18 110.1 11.6 110 98-220 70-179 (189)
33 cd03398 PAP2_haloperoxidase PA 99.5 3.7E-13 8E-18 116.2 11.8 114 101-216 95-229 (232)
34 PF14378 PAP2_3: PAP2 superfam 99.0 1.9E-08 4.1E-13 84.3 16.5 64 141-214 126-189 (191)
35 COG3907 PAP2 (acid phosphatase 98.7 1.8E-06 3.8E-11 70.8 16.7 119 96-220 111-236 (249)
36 COG1963 Uncharacterized protei 97.2 0.0031 6.7E-08 49.3 9.1 104 99-220 14-150 (153)
37 PF02681 DUF212: Divergent PAP 97.1 0.0013 2.9E-08 51.8 6.2 52 98-160 7-60 (141)
38 PF14360 PAP2_C: PAP2 superfam 96.8 0.0084 1.8E-07 42.1 7.0 64 143-214 6-69 (74)
39 KOG3058 Uncharacterized conser 90.3 4.3 9.3E-05 36.9 10.8 113 90-210 139-270 (351)
40 PF10261 Scs3p: Inositol phosp 81.4 35 0.00075 29.5 14.3 33 182-216 204-236 (238)
41 COG5336 Uncharacterized protei 65.4 20 0.00043 27.0 5.1 34 201-241 50-83 (116)
42 COG4129 Predicted membrane pro 52.5 85 0.0018 28.7 8.1 69 142-221 10-78 (332)
43 PF12270 Cyt_c_ox_IV: Cytochro 51.5 1.2E+02 0.0026 23.9 11.6 43 101-151 49-91 (137)
44 COG3301 NrfD Formate-dependent 44.7 1.4E+02 0.0031 26.6 7.9 92 56-158 8-102 (305)
45 PF06799 DUF1230: Protein of u 37.4 71 0.0015 25.4 4.5 29 177-205 67-95 (144)
46 PF07694 5TM-5TMR_LYT: 5TMR of 34.3 2.3E+02 0.0051 22.4 8.0 19 179-197 61-79 (169)
47 COG3004 NhaA Na+/H+ antiporter 33.9 2.4E+02 0.0052 25.8 7.7 27 184-213 214-240 (390)
48 TIGR02916 PEP_his_kin putative 33.3 5E+02 0.011 25.9 13.2 71 146-216 2-72 (679)
49 PF11282 DUF3082: Protein of u 32.4 1.9E+02 0.0041 20.7 6.1 30 199-228 3-32 (82)
50 PF06168 DUF981: Protein of un 31.8 2.4E+02 0.0053 23.5 7.1 27 244-270 58-84 (191)
51 KOG3750 Inositol phospholipid 30.6 1.7E+02 0.0036 25.8 6.1 79 142-222 153-246 (270)
52 PF06946 Phage_holin_5: Phage 28.9 2.3E+02 0.0051 20.7 8.3 47 180-226 39-87 (93)
53 PF12597 DUF3767: Protein of u 26.9 60 0.0013 24.8 2.5 26 251-277 32-57 (118)
54 TIGR02005 PTS-IIBC-alpha PTS s 23.7 1.2E+02 0.0026 29.5 4.5 50 202-251 138-195 (524)
55 PF14034 Spore_YtrH: Sporulati 22.9 2.9E+02 0.0063 20.6 5.3 27 253-279 69-95 (102)
56 PLN02248 cellulose synthase-li 22.8 5.1E+02 0.011 27.8 8.8 45 179-223 1044-1089(1135)
57 PHA00407 phage lambda Rz1-like 21.7 1.2E+02 0.0026 21.2 2.9 16 2-17 25-40 (84)
58 PF06295 DUF1043: Protein of u 20.9 98 0.0021 23.9 2.7 19 203-221 2-20 (128)
59 TIGR00844 c_cpa1 na(+)/h(+) an 20.3 2.2E+02 0.0047 29.4 5.6 28 199-226 208-235 (810)
No 1
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=314.34 Aligned_cols=250 Identities=37% Similarity=0.617 Sum_probs=226.6
Q ss_pred hhhhhHHHHHhhhhHHHHhhhcChHHHHHHHh-hcchhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 023472 25 CLNVTQKLRSLLQPWVTHYVIIGTAFILQIQK-YQHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAF 103 (281)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~lq~-~~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~ 103 (281)
+.....+.|...++++.+.++.+.+.....|+ .+|+++|.+|...|.+|++.||++++|+.+|..+...+++++..++.
T Consensus 43 f~~~~~~~R~~lr~~l~p~~rn~~~~~~~~qk~~rn~fld~yF~yts~lGsh~FYilfLP~~~W~g~~~ltrdm~~i~~~ 122 (407)
T KOG2822|consen 43 FPKFMHKFRFNLREWLAPAVRNQSPLLYRQQKKVRNPFLDVYFSYTSLLGSHVFYILFLPFPFWNGDPYLTRDMTYIWVL 122 (407)
T ss_pred cccchhhHHhhchhhhhhhhhccChHHHHHHHHhcCchHHhhhhhhhhhcchhhheeehhhHHhcCChhHhhHHHHHHHH
Confidence 33446778899999999999999999999997 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Q 023472 104 CDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCL 183 (281)
Q Consensus 104 ~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (281)
++++++.+|+.++.|||.+||+.+++..+ ..++|||+||+||++++++...+++.+....+...+ .+.++..++++
T Consensus 123 ~~Ylggc~KD~~~lPRP~sPPvvrltls~---~~~~EYG~PStHt~natais~~~~~~ls~~d~~s~p-~~~lgl~lv~~ 198 (407)
T KOG2822|consen 123 VMYLGGCIKDYWCLPRPSSPPVVRLTLSE---DTTKEYGMPSTHTMNATAISFYFFLVLSTMDRESYP-IQYLGLSLVLL 198 (407)
T ss_pred HHHHhhhhhheeecCCCCCCCeEEEEecc---chhhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhH-HHHHHHHHHHH
Confidence 99999999999999999999999997654 377899999999999999998876665543332222 34566677888
Q ss_pred HHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCchhHHHHHHHHHHHhhcCCCCCCCCChhhHH
Q 023472 184 LVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYVDNFIISGHNVLSFWSALSFLLLFAYPTPELPTPSFEFHT 263 (281)
Q Consensus 184 ~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~ 263 (281)
+..++++||+|+|||...|+++|.++|+++..+.+.+.+.+|.++.+..+++.+.+++++.++..||+|+++||||||++
T Consensus 199 y~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~~~~~~~dnf~~s~~~fP~~sv~l~lfllf~hp~p~~~~p~~eDs~ 278 (407)
T KOG2822|consen 199 YYALVCLGRIYCGMHGVLDIVSGLLIGVLILILRYPFVDFIDNFISSSQWFPLFSVVLGLFLLFFHPTPDDECPCREDST 278 (407)
T ss_pred HHHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhhhHHHhccchhhcCccccHHHHHHHHHHhccCCCCCCCCCchhhhh
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 023472 264 AFNGVALGIVSTCSL 278 (281)
Q Consensus 264 ~~~g~~~G~~~g~~~ 278 (281)
+|+|++.|+..|.|+
T Consensus 279 aflgv~~GI~cg~w~ 293 (407)
T KOG2822|consen 279 AFLGVGAGIDCGDWL 293 (407)
T ss_pred hhhhhhccceeeccc
Confidence 999999999999886
No 2
>PLN02525 phosphatidic acid phosphatase family protein
Probab=100.00 E-value=1.1e-41 Score=306.27 Aligned_cols=214 Identities=79% Similarity=1.336 Sum_probs=186.8
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCC
Q 023472 65 LFSGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLP 144 (281)
Q Consensus 65 ~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFP 144 (281)
+|...+.+++.+++++++++++|+++++.++.++.+++.+.++++.+|+.++||||..++.++++..+.+...+.+||||
T Consensus 8 ~f~~~~~l~~~~Fyi~~Lp~l~w~~~~~~~~~lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFP 87 (352)
T PLN02525 8 FFSGLSCVVSVPFYTAFLPLLFWSGHGKLARQMTLLMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLP 87 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCC
Confidence 88899999999999999999999999999999999999999999999999999999988877766655555567899999
Q ss_pred cccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhH
Q 023472 145 SSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYV 224 (281)
Q Consensus 145 SgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~ 224 (281)
||||++++++++++.+++.+..++++++.+.....+.++++.++++||+|+|+|||+||++|+++|++++.++..+.+.+
T Consensus 88 SgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~~~~~~~~ 167 (352)
T PLN02525 88 SSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFWLTVDEYV 167 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888776654433333334433335567789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCchhHHHHHHHHHHHhhcCCCCCCCCChhhHHHHHHHHHHHHhhhhh
Q 023472 225 DNFIISGHNVLSFWSALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVSTCSL 278 (281)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~g~~~G~~~g~~~ 278 (281)
|+++.++++.+..++.+.++++..||+|+++||||+|+++++|+++|+.+|.|.
T Consensus 168 d~~i~~~~~~~~~~~~l~~lll~~~p~p~~~~P~f~ds~af~GV~~Gi~~g~~~ 221 (352)
T PLN02525 168 DAFITSGQNVTPFWAALSFLLLFAYPTPEFPTPSFEYHTAFNGVAFGIVAGVQQ 221 (352)
T ss_pred HHHhhcCCccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHhhhhh
Confidence 999998888777777888888899999999999999999999999999999874
No 3
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.96 E-value=3.2e-28 Score=202.74 Aligned_cols=168 Identities=21% Similarity=0.317 Sum_probs=131.6
Q ss_pred hhcChHHHHHHHhhcchhHHHHHHHHhhhchHHHHHHHH----HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 023472 44 VIIGTAFILQIQKYQHKFLDSLFSGLSCVVSVPFYTGFL----PLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPR 119 (281)
Q Consensus 44 ~~~d~~i~~~lq~~~~p~l~~~~~~~s~lg~~~~~~~~l----~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pR 119 (281)
.+.|.++..++|+.++|.+|.++..++.+|+...+..+. .++.++++++....+......+..++..+|..++|||
T Consensus 10 ~~~D~~i~~~~~~~~~~~~~~~~~~it~lg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~R 89 (182)
T cd03392 10 TAFDQSVLSLLRSLRTPLLTAFMTAITFLGSPAVLLIIVLLLALLLLLKRRRRAALFLLLALLGGGALNTLLKLLVQRPR 89 (182)
T ss_pred hhHHHHHHHHHHhcCChHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 347999999999999999999999999999986554332 2244555566666667777888899999999999999
Q ss_pred CCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccC
Q 023472 120 PSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHS 199 (281)
Q Consensus 120 P~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~ 199 (281)
|...+.. ++.++||||||++++++++.++.+.+.++.++. ..+.....+.+.++..+++||+|+|+||
T Consensus 90 P~~~~~~----------~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~sRv~lg~H~ 157 (182)
T cd03392 90 PPLHLLV----------PEGGYSFPSGHAMGATVLYGFLAYLLARRLPRR--RVRILLLILAAILILLVGLSRLYLGVHY 157 (182)
T ss_pred CCCcccC----------CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchh--hHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9754310 356899999999999999988876665433221 2333333566788999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Q 023472 200 LVDIIAGLALGLAVLAFWLTVHEY 223 (281)
Q Consensus 200 ~sDVi~G~~lG~~~~~~~~~~~~~ 223 (281)
|+||++|+++|.+++.+....+++
T Consensus 158 ~sDvl~G~~lG~~~~~~~~~~~~~ 181 (182)
T cd03392 158 PSDVLAGWLLGLAWLALLILLYRR 181 (182)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999888776654
No 4
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.96 E-value=2.2e-28 Score=197.67 Aligned_cols=149 Identities=40% Similarity=0.730 Sum_probs=117.4
Q ss_pred hhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccccccc
Q 023472 60 KFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENAL 139 (281)
Q Consensus 60 p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~ 139 (281)
|++|.+|..+|++|+..++++++++++|.++++.++.+......+..++..+|..++||||..++..... ...+.+
T Consensus 1 ~~ld~~~~~it~lg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~----~~~~~~ 76 (151)
T cd03388 1 PFLDYYFAFTALLGTHTFYILFLPFLFWNGDPYVGRDLVVVLALGMYIGQFIKDLFCLPRPSSPPVVRLT----MSSAAL 76 (151)
T ss_pred ChHHHHHHHHHHhcchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCchhhhh----ccccCC
Confidence 5789999999999998877777888889888887777777888888899999999999999864322111 001467
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 140 EYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 140 ~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
+|||||||++++++++..+.....++.++ .++........++.++++||+|+|+|||+||++|+++|.+++..
T Consensus 77 ~~SFPSgH~~~a~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~ 149 (151)
T cd03388 77 EYGFPSTHAMNATAISFYLLIYLYDRYQY----PFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLF 149 (151)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999998877665433222 12222245667889999999999999999999999999988754
No 5
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.96 E-value=1.8e-27 Score=197.27 Aligned_cols=166 Identities=20% Similarity=0.194 Sum_probs=116.9
Q ss_pred hcChHHHHHHHhh-cchhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHHH-HHH----HHHHHHHHHHHHHhhcCCC
Q 023472 45 IIGTAFILQIQKY-QHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLARH-MTL----LMAFCDYLGNTIKDTVSAP 118 (281)
Q Consensus 45 ~~d~~i~~~lq~~-~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~-l~~----~~~~~~~l~~~lK~~~~~p 118 (281)
+.|.++.+++|+. ++|.+|.++..+|.+|+.....+.+.+.++..+++.... ... ....+..++..+|..++||
T Consensus 4 ~~D~~l~~~i~~~~~~~~l~~~~~~it~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~ 83 (177)
T cd03395 4 QIDVWLFLLLNGTLVHPLLDDLMPFLTGKKLSVPIFLLLALFILFRKGPIGLLILLLVLLAVGFADQLASGFLKPLVARL 83 (177)
T ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHCchhHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4699999999986 599999999999999987554333222222222222222 211 2233456788999999999
Q ss_pred CCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCcc
Q 023472 119 RPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMH 198 (281)
Q Consensus 119 RP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H 198 (281)
||...+...... ...++..++||||||++.+++++..+.+..+++ ..+ .+...++.++++||+|+|+|
T Consensus 84 RP~~~~~~~~~~--~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~------~~~----~~~~~~~~~v~~SRvylG~H 151 (177)
T cd03395 84 RPCNALDGVRLV--VLGDQGGSYSFASSHAANSFALALFIWLFFRRG------LFS----PVLLLWALLVGYSRVYVGVH 151 (177)
T ss_pred CCCCCccccccc--cccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH------HHH----HHHHHHHHHHHHHHHHhCCc
Confidence 998642211000 012356789999999999999988876554321 122 44567789999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHH
Q 023472 199 SLVDIIAGLALGLAVLAFWLTVHE 222 (281)
Q Consensus 199 ~~sDVi~G~~lG~~~~~~~~~~~~ 222 (281)
||+||++|+++|..++.+...+++
T Consensus 152 ~psDVl~G~~lG~~~~~~~~~~~~ 175 (177)
T cd03395 152 YPGDVIAGALIGIISGLLFYLLFS 175 (177)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988776654
No 6
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.94 E-value=6e-26 Score=189.41 Aligned_cols=163 Identities=20% Similarity=0.177 Sum_probs=115.7
Q ss_pred hcChHHHHHHHhhcchhHHHHHHHHhhhchHHHHHHHH---HHHHHhc------------Ch---HHHHHHHHHHHHHHH
Q 023472 45 IIGTAFILQIQKYQHKFLDSLFSGLSCVVSVPFYTGFL---PLVFWSG------------HV---KLARHMTLLMAFCDY 106 (281)
Q Consensus 45 ~~d~~i~~~lq~~~~p~l~~~~~~~s~lg~~~~~~~~l---~~l~~~~------------~~---~~~~~l~~~~~~~~~ 106 (281)
..|.++.+++|+.++|.+|.++..++++|++..+.+.. .+..+.+ ++ +....+..++..+..
T Consensus 4 ~~D~~~~~~~~~~~~~~l~~~~~~it~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 83 (186)
T cd03389 4 YLDRPLALYIKALDGRILAGFFRTITDFGKSGWYLIPSLLLFLLFRFGDLRGLSAPSRARFPKAAWAGLFLFATVALSGI 83 (186)
T ss_pred eccHHHHHHHHHCCchhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999874433321 1222211 11 223334455666778
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Q 023472 107 LGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVG 186 (281)
Q Consensus 107 l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (281)
+++.+|..++||||...........+.....+.++||||||++.+++.+.++....++ ++ .....++.
T Consensus 84 i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~~--------~~----~~~~~~~~ 151 (186)
T cd03389 84 LVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFPR--------YR----WAFILLAL 151 (186)
T ss_pred HHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHH--------HH----HHHHHHHH
Confidence 8889999999999975321111111111123567999999999999998887765432 12 23355778
Q ss_pred HHHHhHhhcCccChHHHHHHHHHHHHHHHHHHH
Q 023472 187 LIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLT 219 (281)
Q Consensus 187 lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~ 219 (281)
++++||+|+|+|||+||++|+++|.+++...+.
T Consensus 152 lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 152 LIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999877654
No 7
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.93 E-value=2.8e-24 Score=181.08 Aligned_cols=164 Identities=18% Similarity=0.191 Sum_probs=109.1
Q ss_pred hcChHHHHHHHhh-cc-hhHHHHHHHHhhhchHHHHH-HHHHHHHHhc------ChHHHHHHHHHHHHHHHHHHHHHhhc
Q 023472 45 IIGTAFILQIQKY-QH-KFLDSLFSGLSCVVSVPFYT-GFLPLVFWSG------HVKLARHMTLLMAFCDYLGNTIKDTV 115 (281)
Q Consensus 45 ~~d~~i~~~lq~~-~~-p~l~~~~~~~s~lg~~~~~~-~~l~~l~~~~------~~~~~~~l~~~~~~~~~l~~~lK~~~ 115 (281)
+.|.+++.++|+. ++ +.++.++..++.-+. ..+. ..+..+++.. +++....+..++.++..++..+|..+
T Consensus 4 ~~d~~lf~~in~~~~~~~~l~~~~~~i~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~ 82 (202)
T PRK11837 4 NLNLSLFSLINATPDSAPWMISLAIFIAKDLI-LIVPLLAVVLWLWGPRDQLTAQRQLVIKIAIALAISLLVSWTIGHLF 82 (202)
T ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999973 43 478888888776321 1221 2222233321 12233334556677788889999999
Q ss_pred CCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhc
Q 023472 116 SAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYL 195 (281)
Q Consensus 116 ~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvyl 195 (281)
+||||....... ....++.++||||||++.+++++..+.. .. + +..+ .....++.++++||+|+
T Consensus 83 ~r~RP~~~~~~~-----~~~~~~~~~SFPSgHa~~~~~~a~~~l~--~~--~---~~~~----~~~~~~a~lva~SRVyl 146 (202)
T PRK11837 83 PHDRPFVEGIGY-----NFLHHAADDSFPSDHGTVIFTFALAFLF--WH--R---LWSG----SLLMAIAVAIAWSRVYL 146 (202)
T ss_pred cCCCCCCCcccc-----ccccCCCCCCCchHHHHHHHHHHHHHHH--HH--H---HHHH----HHHHHHHHHHHHHHHHh
Confidence 999997532211 1123466899999999988876543322 11 0 1122 34567789999999999
Q ss_pred CccChHHHHHHHHHHHHHHHHHHHHHHhHH
Q 023472 196 GMHSLVDIIAGLALGLAVLAFWLTVHEYVD 225 (281)
Q Consensus 196 G~H~~sDVi~G~~lG~~~~~~~~~~~~~~~ 225 (281)
|+|||+||++|+++|.+++.+....++..+
T Consensus 147 GvHypsDVlgG~~lG~~~~~~~~~~~~~~~ 176 (202)
T PRK11837 147 GVHWPLDMLGALLVGMIGCLSAQIIWQLFG 176 (202)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987765555444
No 8
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.91 E-value=1.7e-23 Score=167.84 Aligned_cols=141 Identities=22% Similarity=0.218 Sum_probs=94.4
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHh-cC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccccccc
Q 023472 62 LDSLFSGLSCVVSVPFYTGFLPLVFWS-GH-VKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENAL 139 (281)
Q Consensus 62 l~~~~~~~s~lg~~~~~~~~l~~l~~~-~~-~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~ 139 (281)
+|.+|..+++.+.....++.+..++.. ++ ++.......++..+..++..+|..++||||...+.... ....+.
T Consensus 1 ld~~~~~~t~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~-----~~~~~~ 75 (144)
T cd03385 1 LDALAIFIAEYLIYILPLLLVVLWLWGGEKQRKVVLFATIAVAVALLINYIIGLLYFHPRPFVVGLGHN-----LLPHAA 75 (144)
T ss_pred CHHHHHHHHhhHHHHHHHHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccc-----cccCCC
Confidence 367788888875442222222222222 22 23334455667778888999999999999975332111 112456
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHH
Q 023472 140 EYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWL 218 (281)
Q Consensus 140 ~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~ 218 (281)
++||||||++.++++...+.. .+ + ++.+ .....++.++++||+|+|+|||+||++|+.+|.+++.+.+
T Consensus 76 ~~SFPSgH~~~~~~~~~~l~~--~~--~---~~~~----~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 76 DSSFPSDHTTLFFSIAFSLLL--RR--R---KWAG----WILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred CCCCCcHHHHHHHHHHHHHHH--Hh--h---HHHH----HHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 899999999999887654332 11 1 1122 3456788899999999999999999999999999887653
No 9
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.91 E-value=3.6e-23 Score=168.28 Aligned_cols=143 Identities=19% Similarity=0.228 Sum_probs=102.1
Q ss_pred hhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHH----HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccc
Q 023472 60 KFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLAR----HMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEK 135 (281)
Q Consensus 60 p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~----~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~ 135 (281)
...|.+++.++.+|+..+.+.....++|..+++..+ .+......+..++..+|..++||||....... ...
T Consensus 11 ~~~~~~~~~~t~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~-----~~~ 85 (159)
T cd03391 11 GPVRPLVKLLELSGHGIPWLAGTISCLWISSSPAGQEVLVNLLLGLLLDIITVAILKALVRRRRPAYNSPDM-----LDY 85 (159)
T ss_pred hhhHHHHHHHHHhcCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcc-----chh
Confidence 467899999999999866655554555543333222 33445555667788999999999998542111 011
Q ss_pred ccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHH
Q 023472 136 ENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLA 215 (281)
Q Consensus 136 ~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~ 215 (281)
...+++||||||++.+++++.++....++. ...+ .....++.++++||+|+|+|||+||++|.++|.+++.
T Consensus 86 ~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~-----~~~~----~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~ 156 (159)
T cd03391 86 VAVDKYSFPSGHASRAAFVARFLLNHLVLA-----VPLR----VLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEAL 156 (159)
T ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHHHHH-----HHHH----HHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHH
Confidence 234579999999999999887776543311 1112 4456789999999999999999999999999998876
Q ss_pred H
Q 023472 216 F 216 (281)
Q Consensus 216 ~ 216 (281)
.
T Consensus 157 ~ 157 (159)
T cd03391 157 L 157 (159)
T ss_pred h
Confidence 4
No 10
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.91 E-value=3.8e-24 Score=167.48 Aligned_cols=122 Identities=31% Similarity=0.485 Sum_probs=94.1
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHH
Q 023472 82 LPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHY 161 (281)
Q Consensus 82 l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 161 (281)
+++++|+.+++.+..+..+...+..++..+|..++||||...+.... ....++.++||||||++.+++++..+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~----~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 78 (125)
T cd03393 3 LSLIYWLVDKRLGRYLGLALCASGYLNAALKEVFKIPRPFTYDGIQA----IYEESAGGYGFPSGHAQTSATFWGSLMLH 78 (125)
T ss_pred EEEEeeeEcHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccch----hccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 56677888888899899999999999999999999999976432110 01135678999999999998877665433
Q ss_pred HHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHH
Q 023472 162 VLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFW 217 (281)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~ 217 (281)
.++ +... .+...++..+++||+|+|+|||+||++|.++|.+++++.
T Consensus 79 ~~~------~~~~----~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 79 VRK------KWFT----LIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HHH------HHHH----HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 221 1111 345567889999999999999999999999999988753
No 11
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.91 E-value=1.9e-22 Score=172.48 Aligned_cols=138 Identities=18% Similarity=0.165 Sum_probs=97.8
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC--CCc--c----ccccccccccccCCCCCcccHHHHHH
Q 023472 82 LPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCP--PVR--R----VTATKDEKENALEYGLPSSHTLNTVC 153 (281)
Q Consensus 82 l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~--~~~--~----~~~~~~~~~~~~~~sFPSgHa~~~~~ 153 (281)
+|+.+. .+++.+..++.+...+..+|.++|.+++|+||... +.+ . ....+.+..++++|||||||++.+++
T Consensus 6 ~p~~~~-~~~~~g~~l~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a 84 (235)
T cd03381 6 FPLCGH-LSQSVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTA 84 (235)
T ss_pred ehHHhh-cchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHH
Confidence 444443 55667777777777887799999999999999852 110 0 00011234578899999999999999
Q ss_pred HHHHHHHHHHHhcc--CchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 154 LAGYLLHYVLSYSQ--NNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 154 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
++.++...+....+ ..++..+.....+...+.+++++||+|+|+|||+||++|+++|..++......
T Consensus 85 ~~~~l~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~~ 153 (235)
T cd03381 85 VLLVMVTALLSHLAGRKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSHI 153 (235)
T ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 98877654432211 11233344444566677888999999999999999999999999988776543
No 12
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.90 E-value=1.1e-22 Score=165.64 Aligned_cols=139 Identities=24% Similarity=0.313 Sum_probs=93.0
Q ss_pred HhhhchHHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCccc
Q 023472 69 LSCVVSVPFYTGFLPLV-FWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSH 147 (281)
Q Consensus 69 ~s~lg~~~~~~~~l~~l-~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgH 147 (281)
....+..++........ ...++++...........+..++..+|..++||||..+.. .++.++||||||
T Consensus 18 ~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~----------~~~~~~SFPSgH 87 (159)
T cd03382 18 LAYLSLLPVAILVGYATLILFRRELEAIYLFIGLLANEALNYVLKRIIKEPRPCSGAY----------FVRSGYGMPSSH 87 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCc----------CCCCCCCCCchh
Confidence 34444444443333322 2223333445556667778888999999999999975432 145689999999
Q ss_pred HHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHH
Q 023472 148 TLNTVCLAGYLLHYVLSYSQN-NYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFW 217 (281)
Q Consensus 148 a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~ 217 (281)
++.+++...++........++ .++..+.....+.++++..+++||+|+|+|||+||++|+++|.+++.++
T Consensus 88 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~ 158 (159)
T cd03382 88 SQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILW 158 (159)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhc
Confidence 998876665554433221111 1123444444567778899999999999999999999999999988764
No 13
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.90 E-value=1.7e-22 Score=165.37 Aligned_cols=138 Identities=18% Similarity=0.274 Sum_probs=103.2
Q ss_pred hcchhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccc
Q 023472 57 YQHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKE 136 (281)
Q Consensus 57 ~~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~ 136 (281)
++.+++++.+..++.+|... ..+..++++....++.+++.+..++..+|..++||||..+... +..
T Consensus 49 ~~~~~l~~~~r~it~lg~~~-------~~l~~~d~~g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~r~~-------~~p 114 (190)
T PRK09597 49 LAFHFTEHYARFIPTILSVA-------IPLIQRDAIGLFQVANASIATTLLTHTTKRALNHVTINDQRLG-------ERP 114 (190)
T ss_pred CCcHHHHHHHHHHHHHHHHH-------HHHHhccHhHHHHHHHHHHHHHHHHHHHHHHhccccccccccc-------cCC
Confidence 58899999999999998766 3455677777788888999999999999999999988643211 112
Q ss_pred cccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 137 NALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 137 ~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
+..++|||||||+++++.+.++.. ++ +.+ .. ...+.+++++++||+|+|+|||+||++|+++|.+++..
T Consensus 115 ~~~~~SFPSGHt~~af~~a~~l~~---~~-~~~---~~----~~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~l 183 (190)
T PRK09597 115 YGGNFNMPSGHSSMVGLAVAFLMR---RY-SFK---KY----WWLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSL 183 (190)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHH---HH-chh---HH----HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 334599999999999876543321 11 111 11 12234567899999999999999999999999998877
Q ss_pred HHH
Q 023472 217 WLT 219 (281)
Q Consensus 217 ~~~ 219 (281)
+..
T Consensus 184 f~~ 186 (190)
T PRK09597 184 FTS 186 (190)
T ss_pred HHh
Confidence 654
No 14
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.89 E-value=5.7e-22 Score=169.80 Aligned_cols=161 Identities=17% Similarity=0.190 Sum_probs=99.6
Q ss_pred cchhHHHHHHHHhhhchHHHHHHH----HHHHHHh--cChHHHHH----HHHHHHHHHHHHHHHHhhcCCCCCC------
Q 023472 58 QHKFLDSLFSGLSCVVSVPFYTGF----LPLVFWS--GHVKLARH----MTLLMAFCDYLGNTIKDTVSAPRPS------ 121 (281)
Q Consensus 58 ~~p~l~~~~~~~s~lg~~~~~~~~----l~~l~~~--~~~~~~~~----l~~~~~~~~~l~~~lK~~~~~pRP~------ 121 (281)
.++.....+..+++.+..+..++. +.+..|+ .++|.... +...++++..++..+|+.+++|||+
T Consensus 33 ~~~~~~~~~~~lT~t~~~p~~~iT~~~l~~~~~~~~r~~~k~~l~l~~~l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~ 112 (244)
T PRK10699 33 EQSWWLKGLFWVTETVTQPWGILTHVLLCGWFLWCLRFRLKAALVLFAILAAAILVGQGVKSWIKERVQEPRPFVVWLEK 112 (244)
T ss_pred CCchHHhhHhheecCCCCchHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Confidence 344555566667777665443322 2222232 23333332 2334566777788999999999996
Q ss_pred CCCC--ccc---------cccc--------------cccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHH
Q 023472 122 CPPV--RRV---------TATK--------------DEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFA 176 (281)
Q Consensus 122 ~~~~--~~~---------~~~~--------------~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (281)
+... +.. ...+ ..-.++++|||||||++++++++.+....+..++ + ...
T Consensus 113 ~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~w~~~hw~~~~gySFPSGHa~~a~~~~l~~~~ll~~~~--~---~~~- 186 (244)
T PRK10699 113 THHIPVDEFYTLKRAERGELVKEQLAEQSNIPQWLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRR--R---YKT- 186 (244)
T ss_pred hcCCCHHHHHccCHHHHHHHHHHHHhccccCCHHHHhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH--H---HHH-
Confidence 2110 000 0000 0013678999999999998876654433332111 1 111
Q ss_pred HHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhHH
Q 023472 177 GVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYVD 225 (281)
Q Consensus 177 ~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~~ 225 (281)
..+..+++..+++||+|+|+|||+||++|.++|.+++.+...+.++..
T Consensus 187 -~~~~~~wa~~v~~SRvyLGvH~psDVlaG~llG~~~~~l~~~l~~~~~ 234 (244)
T PRK10699 187 -VALLMLWATGVMGSRLLLGMHWPRDLVVATLISWLLVTVATWLAQRIC 234 (244)
T ss_pred -HHHHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 144667889999999999999999999999999999888777655443
No 15
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.87 E-value=2.4e-21 Score=146.99 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhH
Q 023472 93 LARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAV 172 (281)
Q Consensus 93 ~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~ 172 (281)
.......+..++..++..+|..++||||. +.||||||++.+++++..+.+...+ +.
T Consensus 9 ~~~~~~~~~~~~~~i~~~lK~~~~r~RP~------------------~~sFPSgHt~~a~a~a~~l~~~~~~------~~ 64 (109)
T cd03383 9 PPHVTFVSLLIVIIVVVILKAYFGRGTPL------------------EGGMPSGHAAIAFSIATAISLITNN------PI 64 (109)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCC------------------CCCCChHHHHHHHHHHHHHHHHHhh------HH
Confidence 33334566778888999999999999994 2489999999999988766543221 11
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHH
Q 023472 173 TQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLT 219 (281)
Q Consensus 173 ~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~ 219 (281)
. ..+...++.++++||+|+|+|||+||++|+++|..++...+.
T Consensus 65 ~----~~~~~~~a~lv~~SRvylg~H~psDVlaG~~lG~~~~~~~~~ 107 (109)
T cd03383 65 I----SILSVLLAVMVAHSRVEMKIHTMWEVVVGAILGALITLLIFK 107 (109)
T ss_pred H----HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 145667889999999999999999999999999998877654
No 16
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.86 E-value=5.7e-21 Score=160.48 Aligned_cols=123 Identities=23% Similarity=0.250 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCcccccc----------ccccccccCCCCCcccHHHHHHHHHHHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSC-----PPVRRVTAT----------KDEKENALEYGLPSSHTLNTVCLAGYLLHY 161 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~-----~~~~~~~~~----------~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 161 (281)
+..++.++..++..+|..++||||.. ++....... ......+..+||||||++.+++.+.++.++
T Consensus 51 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~ 130 (193)
T cd03390 51 LLLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLY 130 (193)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHH
Confidence 34556677888999999999999974 111100000 001112345899999999999988887766
Q ss_pred HHHhcc---CchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHH
Q 023472 162 VLSYSQ---NNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLT 219 (281)
Q Consensus 162 ~~~~~~---~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~ 219 (281)
+.++.+ ++.+.++.....+.+++++++++||+|+|.||++||++|+++|..++.+.++
T Consensus 131 l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~SRi~~g~H~~sDVlaG~~lG~~~a~~~~~ 191 (193)
T cd03390 131 LAGKLHIFDPRGSSWRLLLALLPLLLAILVAVSRTRDYRHHFSDVIAGSLIGLIIAYLSYR 191 (193)
T ss_pred HHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHheeE
Confidence 653321 1223344444456778899999999999999999999999999999877654
No 17
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.85 E-value=5.8e-21 Score=145.15 Aligned_cols=103 Identities=21% Similarity=0.177 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCch
Q 023472 91 VKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNY 170 (281)
Q Consensus 91 ~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~ 170 (281)
++....+..++.++..++..+|..++||||.... +.++||||||++.+++++.++..... +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~-------------~~~~sfPSgHa~~a~~~~~~~~~~~~----~-- 62 (106)
T cd03394 2 REGLLILAEAAALTAAVTEGLKFAVGRARPDGSN-------------NGYRSFPSGHTASAFAAATFLQYRYG----W-- 62 (106)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------------CCCCccCcHHHHHHHHHHHHHHHHHc----c--
Confidence 4556667788888999999999999999996421 45899999999999988876543221 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 171 AVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 171 ~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
++.+ .....++.++++||+|+|+|||+||++|.++|.+++.+
T Consensus 63 ~~~~----~~~~~~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~ 104 (106)
T cd03394 63 RWYG----IPAYALASLVGASRVVANRHWLSDVLAGAAIGILVGYL 104 (106)
T ss_pred hHHH----HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHheee
Confidence 1122 34556788999999999999999999999999988654
No 18
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.85 E-value=2.4e-20 Score=150.24 Aligned_cols=123 Identities=20% Similarity=0.178 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCccccc--------------cccccccccCCCCCcccHHHHHHH
Q 023472 94 ARHMTLLMAFCDYLGNTIKDTVSAPRPSC-----PPVRRVTA--------------TKDEKENALEYGLPSSHTLNTVCL 154 (281)
Q Consensus 94 ~~~l~~~~~~~~~l~~~lK~~~~~pRP~~-----~~~~~~~~--------------~~~~~~~~~~~sFPSgHa~~~~~~ 154 (281)
...+.+.+..+..++..+|..++||||+. |+...... ..++...+.++||||||++.+++.
T Consensus 6 ~~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~ 85 (150)
T cd03384 6 VGVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYA 85 (150)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHH
Confidence 34566778888899999999999999973 21111000 001111456899999999999988
Q ss_pred HHHHHHHHHHhccC-chhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 155 AGYLLHYVLSYSQN-NYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 155 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
+.++.+++.++.+. ..+.++.+...+.+.++.++++||+|+|.||++||++|.++|.++++.
T Consensus 86 ~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 86 AVFLALYLQARLKLRGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 88877666543222 233445455566788899999999999999999999999999998864
No 19
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.84 E-value=9.1e-20 Score=153.65 Aligned_cols=118 Identities=17% Similarity=0.135 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCC----cccccc--ccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCch
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSCPPV----RRVTAT--KDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNY 170 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~~~~----~~~~~~--~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~ 170 (281)
+..++..+..++..+|..++||||..... ...... .....++.++||||||++.+++++..... ..++ ++
T Consensus 72 ~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~-~~~~-~~-- 147 (197)
T cd03396 72 LILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFL-FRRR-RP-- 147 (197)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHH-HHHh-cc--
Confidence 45566677778999999999999975311 000000 11234567899999999999987654432 2221 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHH
Q 023472 171 AVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLT 219 (281)
Q Consensus 171 ~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~ 219 (281)
.++.....+.+.++.++++||+|.|+||+|||++|+++|.+++.+.+.
T Consensus 148 -~~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~ 195 (197)
T cd03396 148 -RLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYR 195 (197)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 123333355677889999999999999999999999999999887764
No 20
>PLN02715 lipid phosphate phosphatase
Probab=99.83 E-value=2.7e-19 Score=159.45 Aligned_cols=124 Identities=21% Similarity=0.278 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCccccc--------cccccccccCCCCCcccHHHHHHHHHHHHHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSC-----PPVRRVTA--------TKDEKENALEYGLPSSHTLNTVCLAGYLLHYVL 163 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~-----~~~~~~~~--------~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~ 163 (281)
+.+++.++..++..+|+.++||||+. |....... .......+..+||||||++.+++..+++.+++.
T Consensus 128 l~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~ 207 (327)
T PLN02715 128 LLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLS 207 (327)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence 45567777888899999999999983 21111000 001112456799999999999999998887765
Q ss_pred HhccC---chhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 164 SYSQN---NYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 164 ~~~~~---~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
.+.+. +...++.....+.++++.+|++||++.+.|+++||++|.++|.+++++.++.
T Consensus 208 ~kl~~~~~~~~~~k~~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~~ 267 (327)
T PLN02715 208 GKIKAFNGEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYRQ 267 (327)
T ss_pred HhhccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 43221 2233454444567788899999999999999999999999999999887654
No 21
>PLN02250 lipid phosphate phosphatase
Probab=99.82 E-value=5.5e-19 Score=157.02 Aligned_cols=124 Identities=25% Similarity=0.323 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCC----CC-ccc---------cccccccccccCCCCCcccHHHHHHHHHHHHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSCP----PV-RRV---------TATKDEKENALEYGLPSSHTLNTVCLAGYLLHYV 162 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~~----~~-~~~---------~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~ 162 (281)
+.+++.++..++..+|+.++||||+.- |. ... .........+...||||||++.+++..+++.+++
T Consensus 103 ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLslyL 182 (314)
T PLN02250 103 LLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLYL 182 (314)
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHHH
Confidence 455667777888999999999999741 11 000 0000011235579999999999999998887776
Q ss_pred HHhcc---CchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 163 LSYSQ---NNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 163 ~~~~~---~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
..+.+ ++...++.....+.++++.++++||+|.+.|+++||++|.++|.+++++.+..
T Consensus 183 ~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y~~ 243 (314)
T PLN02250 183 SGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCYLQ 243 (314)
T ss_pred HHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 53322 22334555444567788999999999999999999999999999999887653
No 22
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.82 E-value=6.5e-19 Score=157.04 Aligned_cols=123 Identities=24% Similarity=0.298 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCccccc--------cccccccccCCCCCcccHHHHHHHHHHHHHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSC-----PPVRRVTA--------TKDEKENALEYGLPSSHTLNTVCLAGYLLHYVL 163 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~-----~~~~~~~~--------~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~ 163 (281)
+.++++++..++..+|..++||||+. |....... .......+...||||||++.+++..+++.+++.
T Consensus 122 ll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~ 201 (333)
T PLN02731 122 LLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLS 201 (333)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence 44566778888999999999999973 11100000 000112355689999999999999998887765
Q ss_pred Hhc---cCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHH
Q 023472 164 SYS---QNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLT 219 (281)
Q Consensus 164 ~~~---~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~ 219 (281)
.+. +.+...++.....+.++++.++++||++.+.|+++||++|+++|.+++++.+.
T Consensus 202 ~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~ 260 (333)
T PLN02731 202 GKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYL 260 (333)
T ss_pred HhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 322 12223345444456778899999999999999999999999999999988765
No 23
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.79 E-value=1.2e-18 Score=134.37 Aligned_cols=111 Identities=27% Similarity=0.377 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccc-cccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHH
Q 023472 100 LMAFCDYLGNTIKDTVSAPRPSCPPVRRV-TATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGV 178 (281)
Q Consensus 100 ~~~~~~~l~~~lK~~~~~pRP~~~~~~~~-~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (281)
....+.+++..+|..++||||+....+.. ........++.++||||||++.+++++.++.....+..++ . ...
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~--~----~~~ 76 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAAR--K----LLI 76 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhhh--H----HHH
Confidence 35678889999999999999975211111 0111233467799999999999999998887766643221 1 112
Q ss_pred HHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 179 ALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 179 ~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
.....++..+++||+|+|.||++|+++|..+|..++..
T Consensus 77 ~~~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~ 114 (116)
T smart00014 77 ILLLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAV 114 (116)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999998754
No 24
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.75 E-value=3.4e-17 Score=126.30 Aligned_cols=113 Identities=26% Similarity=0.271 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHH
Q 023472 98 TLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAG 177 (281)
Q Consensus 98 ~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (281)
......+..++..+|..+.+|||.......... .....++.++||||||++.+++.+.++.....+.. .+...
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~-~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~------~~~~~ 81 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDG-DPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRL------LRLLL 81 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCcc-chhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHH------HHHHH
Confidence 344444555788999999999998642211100 11234677899999999999999988876654321 11112
Q ss_pred HHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHH
Q 023472 178 VALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFW 217 (281)
Q Consensus 178 ~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~ 217 (281)
......++..+++||+|+|.||++|+++|.++|..++...
T Consensus 82 ~~~~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 82 GLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 2567788999999999999999999999999999887653
No 25
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.74 E-value=8.9e-19 Score=137.15 Aligned_cols=124 Identities=23% Similarity=0.274 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHH
Q 023472 96 HMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQF 175 (281)
Q Consensus 96 ~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (281)
.+...++.+..++..+|..+++|||.....+.............++||||||++.+++.+.++.....++ ... +.
T Consensus 4 ~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~----~~~-~~ 78 (129)
T PF01569_consen 4 ALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSR----GWI-RI 78 (129)
T ss_dssp HHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCC----HHH-SE
T ss_pred ccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhcc----ccc-cc
Confidence 4566777788888999999999999753211100000000111257999999999999888776554321 111 00
Q ss_pred HHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhH
Q 023472 176 AGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYV 224 (281)
Q Consensus 176 ~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~ 224 (281)
........++.++++||+|+|.||++|+++|+++|..++.+.....++.
T Consensus 79 ~~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~~~ 127 (129)
T PF01569_consen 79 LLFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYKKR 127 (129)
T ss_dssp EHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCHHH
T ss_pred hhhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1124567789999999999999999999999999999988887655543
No 26
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.73 E-value=1.6e-16 Score=136.81 Aligned_cols=105 Identities=21% Similarity=0.161 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHH
Q 023472 101 MAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVAL 180 (281)
Q Consensus 101 ~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (281)
..-....+..+|..++|+||+...........++.....++||||||++.+++.+.++..+++++. ..
T Consensus 110 ~~da~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~------------~~ 177 (232)
T cd03397 110 LEDAGSATYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERA------------DE 177 (232)
T ss_pred HHHHHHHHHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH------------HH
Confidence 333344478899999999998532111111111122456899999999999998887776665321 11
Q ss_pred HHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHH
Q 023472 181 LCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFW 217 (281)
Q Consensus 181 ~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~ 217 (281)
....+..+|.||+|+|+||++||++|.++|..++...
T Consensus 178 l~~~a~~~g~SRv~~GvH~psDV~aG~~lG~~~~a~l 214 (232)
T cd03397 178 ILARGSEYGQSRIVCGVHWPSDVMGGRIMAAALVAAL 214 (232)
T ss_pred HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 2345678999999999999999999999999875544
No 27
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.73 E-value=2.1e-16 Score=134.02 Aligned_cols=120 Identities=23% Similarity=0.255 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhH
Q 023472 95 RHMTLLMAFCDYLGNTIKD--TVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAV 172 (281)
Q Consensus 95 ~~l~~~~~~~~~l~~~lK~--~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~ 172 (281)
.............+..+|. .+.+|||..... ....+.++||||||++.+++.+.++.....+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~--- 162 (232)
T COG0671 94 LKLLVGLPRPLIVLSALKTWHIFARPRPGLLVA--------LVLGASGYSFPSGHAAGAAAAALLLALLLPLRRALL--- 162 (232)
T ss_pred HHHHHHhHHHHHHHHHHhccccccCCCCcchhc--------cccCcccCCCCChhHHHHHHHHHHHHHHHHHHHhhh---
Confidence 3344445556667778887 889999965321 112456899999999999998877776665432221
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhHH
Q 023472 173 TQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYVD 225 (281)
Q Consensus 173 ~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~~ 225 (281)
.++........++.++++||+|+|+|||+||++|.++|..++.......+...
T Consensus 163 ~~~~~~~~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~~~ 215 (232)
T COG0671 163 RRVLLLILLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRPLA 215 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhccc
Confidence 23333466778899999999999999999999999999999998887766544
No 28
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.68 E-value=3.5e-15 Score=122.14 Aligned_cols=125 Identities=24% Similarity=0.342 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhc-cCchh
Q 023472 93 LARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYS-QNNYA 171 (281)
Q Consensus 93 ~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~-~~~~~ 171 (281)
.+.......+.+..+|.++|+.+++|||..-|. .+-..+||+||.|++...-+..+..+...++. .+...
T Consensus 56 ~a~~~~~G~v~Ne~in~viK~il~qpRP~~~~~---------~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s 126 (228)
T KOG3146|consen 56 AAIWFVIGQVSNEFINVVIKNILKQPRPVSFPD---------TTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFS 126 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc---------cccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 455566778889999999999999999965332 13456999999999987766665544444322 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 023472 172 VTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVHEYVDN 226 (281)
Q Consensus 172 ~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~~~~~~ 226 (281)
+..++...+...++..+++||+|++.|+.++|+.|+++|.+.+..++.+.+.+..
T Consensus 127 ~~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv~G~ivG~l~g~~Wf~~v~slll 181 (228)
T KOG3146|consen 127 RFLFIKSGLLLALSFYVCYSRVYLKYHTLSQVVVGAIVGGLVGILWFYLVNSLLL 181 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 2332333556678899999999999999999999999999999999999888743
No 29
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.68 E-value=2.4e-15 Score=127.92 Aligned_cols=107 Identities=21% Similarity=0.116 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccc-cccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTA-TKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQF 175 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~-~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (281)
+..++.-+..++..+|..++|+||.......... .........++||||||++.+++.+.++..++.++ .
T Consensus 98 l~~a~~da~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~-------~-- 168 (209)
T cd03380 98 LARALTDAGIATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPER-------A-- 168 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-------H--
Confidence 3444455556678999999999997532100000 00011356689999999999999998887766531 1
Q ss_pred HHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHH
Q 023472 176 AGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLA 215 (281)
Q Consensus 176 ~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~ 215 (281)
.....++..++.||+|+|+||++||++|..+|..++.
T Consensus 169 ---~~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~ 205 (209)
T cd03380 169 ---AELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAA 205 (209)
T ss_pred ---HHHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHH
Confidence 1234577889999999999999999999999988764
No 30
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=99.64 E-value=1.2e-14 Score=129.10 Aligned_cols=124 Identities=20% Similarity=0.185 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCcc-cc-------------cc-ccccccccCCCCCcccHHHHHHHHH
Q 023472 97 MTLLMAFCDYLGNTIKDTVSAPRPSC-----PPVRR-VT-------------AT-KDEKENALEYGLPSSHTLNTVCLAG 156 (281)
Q Consensus 97 l~~~~~~~~~l~~~lK~~~~~pRP~~-----~~~~~-~~-------------~~-~~~~~~~~~~sFPSgHa~~~~~~~~ 156 (281)
+.+.++.+..++.++|..++|+||.. |.... .+ .. .++.-.+...||||||++.++..++
T Consensus 115 ~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~ 194 (317)
T KOG3030|consen 115 FLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMG 194 (317)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHH
Confidence 44566677778889999999999983 22211 00 00 1222234568999999999999999
Q ss_pred HHHHHHHHh-ccC-chhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 157 YLLHYVLSY-SQN-NYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 157 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
++.+++... ... +.+.+|..++++.+++++.+|+||+-...|+++||++|+++|++++++.+..
T Consensus 195 flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~ 260 (317)
T KOG3030|consen 195 FLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRY 260 (317)
T ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhh
Confidence 988666532 222 3667787777888899999999999999999999999999999999887643
No 31
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.62 E-value=6.1e-14 Score=117.11 Aligned_cols=149 Identities=21% Similarity=0.156 Sum_probs=96.1
Q ss_pred cchhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCCCcccccc----
Q 023472 58 QHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVS--APRPSCPPVRRVTAT---- 131 (281)
Q Consensus 58 ~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~--~pRP~~~~~~~~~~~---- 131 (281)
+++.++..+..............++.++++.++++..++...++.++..+....-..+. +|||..+........
T Consensus 22 ~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~iy~l~P~~~P~~~~~~~~~~~~~~~~~ 101 (186)
T cd03386 22 RHIPLDPLAWFPYGSLHFLVPLALLAWLFLFRPPGTLRRFRRALGLANLLGLLIYLLFPTAPPRYEPPYGLILLVLLMYG 101 (186)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhcccCCCCCccCccCCcchhhhcCC
Confidence 57777777777666543333333333335566677777777777777777776655554 455443211111000
Q ss_pred ------ccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHH
Q 023472 132 ------KDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIA 205 (281)
Q Consensus 132 ------~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~ 205 (281)
.........++|||+|++.++.++..+....+ ++++ .+...++.++++||+|+|.||++|+++
T Consensus 102 ~~~~~~~~~~~~~~~~~fPS~H~~~a~~~~~~~~~~~~-------~~~~----~~~~~~~~~i~~s~v~~~~H~~~Dv~~ 170 (186)
T cd03386 102 SAGYTSGFGGFDNPFNAFPSLHVAWAVLAALFLWRHRR-------RLLR----WLAVLWPLLIWLSTLYLGNHYFIDLVG 170 (186)
T ss_pred CccccccccCCCCCcceeCcHHHHHHHHHHHHHHHHHH-------HHHH----HHHHHHHHHHHHHHHHHCCccHHHHHH
Confidence 01123456789999999999887766543221 1233 456778889999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 023472 206 GLALGLAVLAFW 217 (281)
Q Consensus 206 G~~lG~~~~~~~ 217 (281)
|..+|.++..+.
T Consensus 171 G~~l~~~~~~~~ 182 (186)
T cd03386 171 GIALALLSFYLA 182 (186)
T ss_pred HHHHHHHHHHHh
Confidence 999999876654
No 32
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.56 E-value=4.7e-14 Score=110.13 Aligned_cols=110 Identities=22% Similarity=0.268 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHH
Q 023472 98 TLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAG 177 (281)
Q Consensus 98 ~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (281)
.+.+.+-.......|..++|.||....... ....+.+.|||||||++.++.+.-+....... ..+ .+
T Consensus 70 lLgLlfDli~vaivk~~f~R~rP~~t~pS~-----l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~----a~P-ly--- 136 (189)
T KOG4268|consen 70 LLGLLFDLITVAIVKKLFKRRRPYETSPSL-----LDYLTMDIYSFPSGHASRAAMVSKFFLSHAVL----AVP-LY--- 136 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCCHHH-----HHHHhhhhhcCCCcchHHHHHHHHHHHHHHHh----ccc-hh---
Confidence 334445555677899999999997541111 11224568999999999988776544322211 111 11
Q ss_pred HHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 178 VALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 178 ~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
....+.|+..+++||+-+|.||.+||++|+.+|.+=+.+...+
T Consensus 137 v~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl~l~~ 179 (189)
T KOG4268|consen 137 VLLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARLVLLV 179 (189)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1446789999999999999999999999999998776655443
No 33
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.48 E-value=3.7e-13 Score=116.20 Aligned_cols=114 Identities=24% Similarity=0.104 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC--Ccc------c--cccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCch
Q 023472 101 MAFCDYLGNTIKDTVSAPRPSCPP--VRR------V--TATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNY 170 (281)
Q Consensus 101 ~~~~~~l~~~lK~~~~~pRP~~~~--~~~------~--~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~ 170 (281)
+.-+...+...|..++++||.... ... . +...+......+.||||||++.+++++.++..++.+......
T Consensus 95 ~~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~ 174 (232)
T cd03398 95 MTDAGIAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPDT 174 (232)
T ss_pred HHHHHHHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 333445677899999999997410 000 0 000011124568999999999999999888766653211100
Q ss_pred -----------hHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 171 -----------AVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 171 -----------~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
...+.. .....++..++.||+|.|+||++|+.+|..+|..++-.
T Consensus 175 ~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~ 229 (232)
T cd03398 175 VSEPDEGGPSTGVTRVW--AELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAA 229 (232)
T ss_pred ccccccCCCCCCCcccH--hHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHH
Confidence 000111 23445678899999999999999999999999887654
No 34
>PF14378 PAP2_3: PAP2 superfamily
Probab=99.03 E-value=1.9e-08 Score=84.32 Aligned_cols=64 Identities=31% Similarity=0.357 Sum_probs=47.8
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHH
Q 023472 141 YGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVL 214 (281)
Q Consensus 141 ~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~ 214 (281)
.+|||.|++.+...+.... +. ++.+..+ .+...+..++.+|-+++|.||..|+++|++++.++.
T Consensus 126 ~afPSlH~a~a~l~~~~~~----~~--~~~~~~~----~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~~ 189 (191)
T PF14378_consen 126 AAFPSLHVAWAVLCALALW----RV--GRPRWLR----ALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLAI 189 (191)
T ss_pred cccCchHHHHHHHHHHHHH----Hc--cccHHHH----HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 4799999998876654432 11 1111222 456778899999999999999999999999998764
No 35
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=98.72 E-value=1.8e-06 Score=70.81 Aligned_cols=119 Identities=12% Similarity=0.083 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCC-------CCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccC
Q 023472 96 HMTLLMAFCDYLGNTIKDTVSAPRPSCP-------PVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQN 168 (281)
Q Consensus 96 ~l~~~~~~~~~l~~~lK~~~~~pRP~~~-------~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~ 168 (281)
....++.++..+...+|.......|.+- +......+.+. ....+.+||-||++..++....++.. ..
T Consensus 111 yvf~~~~L~~s~i~~lKalta~~CPWdLv~yGG~~~~~~L~~~rpp-~~~pGhCfPgGHASsGfa~~aLfFa~-----~~ 184 (249)
T COG3907 111 YVFVTLVLSTSLISLLKALTAMDCPWDLVRYGGGFPFIGLFESRPP-LKAPGHCFPGGHASSGFAWVALFFAA-----WG 184 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCHHHHHhCCCCcceEeecCCCC-CCCCCCcCCCCCccccHHHHHHHHHH-----cc
Confidence 3455677888899999999999999751 11111112111 23457899999999888876544332 23
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 169 NYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
+.+++++++...++....+.++||+-.|+|+.|.-+-...+-.+++...+++
T Consensus 185 ~~Prla~l~l~~g~~~G~l~g~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l 236 (249)
T COG3907 185 VCPRLAWLGLMIGLVAGLLFGISQQLRGAHFLSHNLWSLTICWLVALGFFYL 236 (249)
T ss_pred cChHHHHHHHHHHHHHHHHHhHHHHhhhhhhhcchHHHHHHHHHHHHHHHHH
Confidence 3456777777788889999999999999999999888888777776665544
No 36
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.25 E-value=0.0031 Score=49.29 Aligned_cols=104 Identities=21% Similarity=0.195 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHH
Q 023472 99 LLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGV 178 (281)
Q Consensus 99 ~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (281)
....++....|++|..+.--|-.-..+.- --+.=|+||+|++..++++..+..--. ..++..
T Consensus 14 lsal~a~~~AQvIKv~I~~~~~rk~~~~~---------~~sTGGMPSsHSA~VtALat~ial~~G----~dS~lF----- 75 (153)
T COG1963 14 LSALVAILLAQVIKVLIELIRTRKLNVTL---------LFSTGGMPSSHSALVTALATSIALTEG----LDSPLF----- 75 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccee---------eeecCCCCchHHHHHHHHHHHHHHHhc----CCCchH-----
Confidence 34455566677777776322221111111 112348999999999888877654322 222211
Q ss_pred HHHHHHHHHHHHh----H----------------h-------------hcCccChHHHHHHHHHHHHHHHHHHHH
Q 023472 179 ALLCLLVGLIAVG----R----------------I-------------YLGMHSLVDIIAGLALGLAVLAFWLTV 220 (281)
Q Consensus 179 ~~~~~~~~lv~~S----R----------------v-------------ylG~H~~sDVi~G~~lG~~~~~~~~~~ 220 (281)
.++..+++.+.+- | + -+--|.|.+|++|.++|++.+++.+.+
T Consensus 76 aiA~vfaiIvm~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~~ 150 (153)
T COG1963 76 AIAAVFAIIVMYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYAF 150 (153)
T ss_pred HHHHHHHHHHhhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence 2333333333321 1 0 133599999999999999999887654
No 37
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=97.13 E-value=0.0013 Score=51.82 Aligned_cols=52 Identities=23% Similarity=0.149 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHH
Q 023472 98 TLLMAFCDYLGNTIKDTVSA--PRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLH 160 (281)
Q Consensus 98 ~~~~~~~~~l~~~lK~~~~~--pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~ 160 (281)
..+-.++..+.|.+|..+.. .|..+. .. --+.=||||.|++..++++..+.+
T Consensus 7 l~~a~~a~~~AQ~iK~~~~~~~~r~~d~--~~---------~~~sGGMPSSHSA~V~aLat~ig~ 60 (141)
T PF02681_consen 7 LIAALIAWFIAQFIKVFINYLKERKWDW--RR---------FFSSGGMPSSHSATVSALATAIGL 60 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccH--HH---------HhhcCCCCchHHHHHHHHHHHHHH
Confidence 34445566677777777652 222211 11 112348999999999888877654
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=96.75 E-value=0.0084 Score=42.12 Aligned_cols=64 Identities=20% Similarity=0.118 Sum_probs=39.6
Q ss_pred CCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHH
Q 023472 143 LPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVL 214 (281)
Q Consensus 143 FPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~ 214 (281)
+.|||++..+....+...+. +++....++.. ....+..+..=+..+.||-.||+.|..+...+-
T Consensus 6 iFSGHt~~~~l~~l~~~~y~----~~~~~~~~~~~----~~~~~~~~~~ii~sr~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYS----PRRFWVLKVIM----WLLAIIGSFLIIASRKHYTVDVVLAYYITSLVF 69 (74)
T ss_pred EEchhHHHHHHHHHHHHHHc----ccchhHHHHHH----HHHHHHHHHHHHHcCCCceeehhhHHHHHHHHH
Confidence 68999998877665544332 22222244333 333333344445556999999999999987654
No 39
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.29 E-value=4.3 Score=36.93 Aligned_cols=113 Identities=13% Similarity=0.034 Sum_probs=62.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccc---ccc--------------cccc--cccCCCCCcccHHH
Q 023472 90 HVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVT---ATK--------------DEKE--NALEYGLPSSHTLN 150 (281)
Q Consensus 90 ~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~---~~~--------------~~~~--~~~~~sFPSgHa~~ 150 (281)
+.-..++..+.++...++-.+.-.....|-|..+-....+ ..+ .+.. ..-|.=.-|||+..
T Consensus 139 r~iv~rR~~f~~gt~y~lR~iTm~vT~LPvP~~h~~C~~k~~~~~~~~~~r~l~~~~~~G~s~~~~~lCGDlmfSGHTlv 218 (351)
T KOG3058|consen 139 RWIVLRRVFFLLGTLYLLRCITMYVTQLPVPGQHFRCAPKPNGDLGEFLHRALEIWSGLGLSLFGVRLCGDLMFSGHTLV 218 (351)
T ss_pred hhhHHHHHHHHHHHHHHHhhheeEEEecccCCCCcccCCcccccHHHHHHHHHHHHHhcCccccccCcccceeeecchHH
Confidence 3345677888888777777766666667766642111000 000 0000 01133358999998
Q ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHH
Q 023472 151 TVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALG 210 (281)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG 210 (281)
.+..+.+.-.+. +++....+++. .++++.-.+.=+.-+-||--||+.++-+-
T Consensus 219 l~~~~l~~~eY~----pr~~~~L~~i~----wll~~~gi~~il~sr~HYTIDVvvAyyit 270 (351)
T KOG3058|consen 219 LTLTALFITEYS----PRRFIILHWIS----WLLAFVGIFLILASRKHYTIDVVVAYYIT 270 (351)
T ss_pred HHHHHHHHHHhc----ccchhHHHHHH----HHHHHHHHHHHHHhCCceeEEEEEehhhH
Confidence 877665554443 33333344333 33333333444566799999999998773
No 40
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=81.36 E-value=35 Score=29.51 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=24.0
Q ss_pred HHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 182 CLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 182 ~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
.++..+....-+| .|++.+=+.|.++|.++.++
T Consensus 204 ~LW~~mll~T~iy--FHT~~EKl~Gl~~g~~~~~~ 236 (238)
T PF10261_consen 204 GLWWWMLLMTSIY--FHTILEKLSGLLFGYLGWYI 236 (238)
T ss_pred HHHHHHHHHHHHH--HCCHHHHHHHHHHHHHhhee
Confidence 3344444555566 89999999999999887543
No 41
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.36 E-value=20 Score=27.00 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCchhHHHHHH
Q 023472 201 VDIIAGLALGLAVLAFWLTVHEYVDNFIISGHNVLSFWSAL 241 (281)
Q Consensus 201 sDVi~G~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (281)
+|.++|.++|+.+.++. |++..++++.+++...+
T Consensus 50 sefIsGilVGa~iG~ll-------D~~agTsPwglIv~lll 83 (116)
T COG5336 50 SEFISGILVGAGIGWLL-------DKFAGTSPWGLIVFLLL 83 (116)
T ss_pred HHHHHHHHHHHHHHHHH-------HHhcCCCcHHHHHHHHH
Confidence 68888888888776553 44454444443333333
No 42
>COG4129 Predicted membrane protein [Function unknown]
Probab=52.50 E-value=85 Score=28.66 Aligned_cols=69 Identities=16% Similarity=0.071 Sum_probs=39.5
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHHHHH
Q 023472 142 GLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWLTVH 221 (281)
Q Consensus 142 sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~~~~ 221 (281)
+...-+|..+++++.+++.++. ...+ . ..++...+++.- -.+.-.|.-.|-+.|..+|+.++.++..+.
T Consensus 10 g~RtlKt~ia~~La~~ia~~l~----~~~~--~----~A~i~AV~~l~~-t~~~s~~~~~~r~~g~~iG~~~a~l~~~l~ 78 (332)
T COG4129 10 GARTLKTGLAAGLALLIAHLLG----LPQP--A----FAGISAVLCLSP-TIKRSLKRALQRLLGNALGAILAVLFFLLF 78 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCch--H----HHHHHHhhcccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4456677777777777766443 1111 0 111112222222 245666777788888888888887776543
No 43
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=51.51 E-value=1.2e+02 Score=23.93 Aligned_cols=43 Identities=26% Similarity=0.302 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccccccccCCCCCcccHHHH
Q 023472 101 MAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNT 151 (281)
Q Consensus 101 ~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~ 151 (281)
..++.++...-|.. .+||.+.+...+ .+.+.+++|.|-|+--=
T Consensus 49 ~mig~yl~~~~rr~--~~rPED~~daEI------~dgAGe~GfFsP~SwWP 91 (137)
T PF12270_consen 49 LMIGFYLRFTARRI--GPRPEDREDAEI------ADGAGELGFFSPHSWWP 91 (137)
T ss_pred HHHHHHHHHHHhhC--CCCCcccccccc------ccCCCCcCcCCCccHhH
Confidence 33444555555655 678876554332 23567899999996433
No 44
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=44.73 E-value=1.4e+02 Score=26.56 Aligned_cols=92 Identities=11% Similarity=0.055 Sum_probs=48.9
Q ss_pred hhcchhHHHHHHHHhhhchHHHHHHHHHHHHHhcChHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023472 56 KYQHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVKLA-RHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDE 134 (281)
Q Consensus 56 ~~~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~~~~~-~~l~~~~~~~~~l~~~lK~~~~~pRP~~~~~~~~~~~~~~ 134 (281)
..+++.+|+.-...-.+....-....+..++|+..+... .+-....+....+-..+-..++..||..-
T Consensus 8 ~~q~~vW~~~IA~yLfL~gIaa~a~~la~l~~r~g~~~~~~r~~svlg~la~iigLl~li~dL~rPw~f----------- 76 (305)
T COG3301 8 HFQSLVWDWPIAIYLFLLGIAAMAVVLAVLLKRFGKLKALLRTGSVLGFLAVILGLLFLIFDLTRPWTF----------- 76 (305)
T ss_pred hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhhhhHHHHHHHHHHHHHHHHHhcChHHH-----------
Confidence 457788877766665555554445556666665554433 22233333333334444555677788421
Q ss_pred cccccCCCCC--cccHHHHHHHHHHH
Q 023472 135 KENALEYGLP--SSHTLNTVCLAGYL 158 (281)
Q Consensus 135 ~~~~~~~sFP--SgHa~~~~~~~~~~ 158 (281)
...-.+|+|- |.-++..+.+..++
T Consensus 77 ~~~mf~~~~~~sS~ms~Gvml~~~~m 102 (305)
T COG3301 77 WKLMFNYSFNASSWMSMGVMLFQLYM 102 (305)
T ss_pred HHHHhchhcCchHHHHHHHHHHHHHH
Confidence 1122356665 66666666655443
No 45
>PF06799 DUF1230: Protein of unknown function (DUF1230); InterPro: IPR009631 This family represents Ycf36, which is found in plants, encoded in the genomes of algal chloroplasts and in cyanobacteria. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=37.37 E-value=71 Score=25.38 Aligned_cols=29 Identities=31% Similarity=0.372 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhHhhcCccChHHHHH
Q 023472 177 GVALLCLLVGLIAVGRIYLGMHSLVDIIA 205 (281)
Q Consensus 177 ~~~~~~~~~~lv~~SRvylG~H~~sDVi~ 205 (281)
+..++.........-|+|+|..|..|=+.
T Consensus 67 ~~~~ga~~~~~l~llRlyLGW~YV~~RL~ 95 (144)
T PF06799_consen 67 SGAVGALLLLLLVLLRLYLGWSYVGDRLL 95 (144)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHhhhc
Confidence 33455556667777888888888777443
No 46
>PF07694 5TM-5TMR_LYT: 5TMR of 5TMR-LYT; InterPro: IPR011620 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the transmembrane region of the 5TM-Lyt (5TM Receptors of the LytS-YhcK type) histidine kinase []. The two-component regulatory system LytS/LytT probably regulates genes involved in cell wall metabolism. ; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0007047 cellular cell wall organization, 0016021 integral to membrane
Probab=34.32 E-value=2.3e+02 Score=22.36 Aligned_cols=19 Identities=21% Similarity=0.078 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhHhhcCc
Q 023472 179 ALLCLLVGLIAVGRIYLGM 197 (281)
Q Consensus 179 ~~~~~~~~lv~~SRvylG~ 197 (281)
..+...+..++..|.+.|-
T Consensus 61 ~~~li~~~i~~~~R~~~gg 79 (169)
T PF07694_consen 61 ISGLIAGLIIGIYRFLLGG 79 (169)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 3456667788899999999
No 47
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=33.94 E-value=2.4e+02 Score=25.84 Aligned_cols=27 Identities=19% Similarity=0.381 Sum_probs=18.0
Q ss_pred HHHHHHHhHhhcCccChHHHHHHHHHHHHH
Q 023472 184 LVGLIAVGRIYLGMHSLVDIIAGLALGLAV 213 (281)
Q Consensus 184 ~~~lv~~SRvylG~H~~sDVi~G~~lG~~~ 213 (281)
.....-++-.-.|+| ..++|.++|..+
T Consensus 214 ~gviLW~~vlkSGVH---ATLAGVi~~f~I 240 (390)
T COG3004 214 VGVILWIAVLKSGVH---ATLAGVILAFFI 240 (390)
T ss_pred HHHHHHHHHHHhhhH---HHHHHHHHHeee
Confidence 344444556778888 678888888554
No 48
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=33.34 E-value=5e+02 Score=25.89 Aligned_cols=71 Identities=17% Similarity=-0.028 Sum_probs=28.5
Q ss_pred ccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHH
Q 023472 146 SHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAF 216 (281)
Q Consensus 146 gHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~ 216 (281)
+|...+.++..+..++...++++...+.-..+..+..+|+...+..+....-+++.-.++.++....|..+
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~w~~~ 72 (679)
T TIGR02916 2 GYGAAAVAYLFLSLLLVTAWRQRLAGGLLLLAAALSAVWALASAALVYMDYPWPLLVLVLEVFRDAAWLAF 72 (679)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 46666665555544444333222222222112122234444444444332222333344444444444333
No 49
>PF11282 DUF3082: Protein of unknown function (DUF3082); InterPro: IPR021434 This family of proteins has no known function.
Probab=32.44 E-value=1.9e+02 Score=20.66 Aligned_cols=30 Identities=3% Similarity=-0.024 Sum_probs=25.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 023472 199 SLVDIIAGLALGLAVLAFWLTVHEYVDNFI 228 (281)
Q Consensus 199 ~~sDVi~G~~lG~~~~~~~~~~~~~~~~~~ 228 (281)
.|-+++.|.+.+..+++..+.+..++....
T Consensus 3 ~Pl~~l~Ga~~ag~la~~ly~lt~~i~~~f 32 (82)
T PF11282_consen 3 TPLRCLSGALIAGGLAYGLYFLTTSIAASF 32 (82)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999998888877644
No 50
>PF06168 DUF981: Protein of unknown function (DUF981); InterPro: IPR009324 This is a family of uncharacterised proteins found in bacteria and archaea.
Probab=31.83 E-value=2.4e+02 Score=23.52 Aligned_cols=27 Identities=26% Similarity=0.207 Sum_probs=21.2
Q ss_pred HHHhhcCCCCCCCCChhhHHHHHHHHH
Q 023472 244 LLLFAYPTPELPTPSFEFHTAFNGVAL 270 (281)
Q Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~g~~~ 270 (281)
-....||-|...+--|.|...+.|+.+
T Consensus 58 ~~~~TWPLPgsYNIlFgd~~~lfGv~l 84 (191)
T PF06168_consen 58 WGTFTWPLPGSYNILFGDPWLLFGVLL 84 (191)
T ss_pred HheeeecCCCcccchHhhhHHHHHHHH
Confidence 334469999999999999888888764
No 51
>KOG3750 consensus Inositol phospholipid synthesis protein, Scs3p [Lipid transport and metabolism]
Probab=30.58 E-value=1.7e+02 Score=25.77 Aligned_cols=79 Identities=24% Similarity=0.251 Sum_probs=42.1
Q ss_pred CC-CcccHHHHHHHHHHHHHHHHH---hccCch--------hHHHHHHHH---HHHHHHHHHHHhHhhcCccChHHHHHH
Q 023472 142 GL-PSSHTLNTVCLAGYLLHYVLS---YSQNNY--------AVTQFAGVA---LLCLLVGLIAVGRIYLGMHSLVDIIAG 206 (281)
Q Consensus 142 sF-PSgHa~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~---~~~~~~~lv~~SRvylG~H~~sDVi~G 206 (281)
|| ||||+-..+....++.--... +...+. +..|..... +..+|-..+-.+ .+-.|...+=+.|
T Consensus 153 GfDiSGH~Fllt~ssl~l~eE~~vf~r~~~~~~~~~~~~l~~~ir~~~~~m~~l~~lW~~ml~~T--viYyH~~~ekVig 230 (270)
T KOG3750|consen 153 GFDISGHVFLLTHSSLFLLEEARVFIRYAQAKLHAQKWQLTTWIRTLFVAMTALLGLWRAMLLVT--VIYYHTLLEKVIG 230 (270)
T ss_pred CcCCcceeHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 55 999998877766665443321 111111 112211111 122222222223 3447888899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 023472 207 LALGLAVLAFWLTVHE 222 (281)
Q Consensus 207 ~~lG~~~~~~~~~~~~ 222 (281)
.+.|.++-+..+.+..
T Consensus 231 ~l~g~l~W~~tY~~~y 246 (270)
T KOG3750|consen 231 ALTGLLTWYFTYRFWY 246 (270)
T ss_pred HHHHHHHHHhheeeec
Confidence 9999887766665543
No 52
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=28.94 E-value=2.3e+02 Score=20.69 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=28.2
Q ss_pred HHHHHHHHHHH-hHhhcCcc-ChHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 023472 180 LLCLLVGLIAV-GRIYLGMH-SLVDIIAGLALGLAVLAFWLTVHEYVDN 226 (281)
Q Consensus 180 ~~~~~~~lv~~-SRvylG~H-~~sDVi~G~~lG~~~~~~~~~~~~~~~~ 226 (281)
+.+....++++ +-.+-+.+ ...|+.+|.+-|.....+.-.+.++-++
T Consensus 39 Is~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~~ 87 (93)
T PF06946_consen 39 ISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSKK 87 (93)
T ss_pred HHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhhh
Confidence 33444444443 23445545 4556789999998888777666654443
No 53
>PF12597 DUF3767: Protein of unknown function (DUF3767); InterPro: IPR022533 This group of proteins includes mitochodrial cytochrome c oxidase proteins [], and some transmembrane domain-containing proteins of unknown function known as FAM36A. Proteins in this family are typically between 112 and 199 amino acids in length.
Probab=26.85 E-value=60 Score=24.83 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=19.3
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHhhhh
Q 023472 251 TPELPTPSFEFHTAFNGVALGIVSTCS 277 (281)
Q Consensus 251 ~~~~~~~~~~~~~~~~g~~~G~~~g~~ 277 (281)
......||+.|+... |+..|+.+|..
T Consensus 32 ~~~~~iPCfR~slL~-Gi~~G~~vG~~ 57 (118)
T PF12597_consen 32 RNVHKIPCFRDSLLY-GIAGGFGVGGL 57 (118)
T ss_pred hHHhcCCcHHHHHHH-HHHHHHHHHhh
Confidence 344567999997766 88888888753
No 54
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=23.66 E-value=1.2e+02 Score=29.55 Aligned_cols=50 Identities=12% Similarity=0.208 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-HHHH--HhcCCchhHHH-----HHHHHHHHhhcCC
Q 023472 202 DIIAGLALGLAVLAFWLTVHEY-VDNF--IISGHNVLSFW-----SALSFLLLFAYPT 251 (281)
Q Consensus 202 DVi~G~~lG~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~-----~~~~l~~~~~~p~ 251 (281)
.|++|++.|.+.+++..++++. +..+ .+++++..++. +.+++++...||.
T Consensus 138 gVfgGIi~G~i~a~l~Nkf~~ikLP~~L~FF~G~RfVpIi~~~~~~~l~~~~~~iWP~ 195 (524)
T TIGR02005 138 SIIGAIIISGIITYIHNRFFDKRLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLVWPK 195 (524)
T ss_pred hhHHHHHHHHHHHHHHHHHhccccchhhhhcCCCcchHhHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999888763 2222 24566654442 3345556667775
No 55
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=22.86 E-value=2.9e+02 Score=20.58 Aligned_cols=27 Identities=15% Similarity=-0.029 Sum_probs=21.3
Q ss_pred CCCCCChhhHHHHHHHHHHHHhhhhhh
Q 023472 253 ELPTPSFEFHTAFNGVALGIVSTCSLI 279 (281)
Q Consensus 253 ~~~~~~~~~~~~~~g~~~G~~~g~~~~ 279 (281)
.+-.|-++.-..++....|...|.++|
T Consensus 69 G~~~~~~KQ~l~Il~Af~GA~~g~~lI 95 (102)
T PF14034_consen 69 GELSDIIKQLLYILSAFLGAHTGYILI 95 (102)
T ss_pred CchHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 344567777888889999999998877
No 56
>PLN02248 cellulose synthase-like protein
Probab=22.80 E-value=5.1e+02 Score=27.84 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhHhhcCcc-ChHHHHHHHHHHHHHHHHHHHHHHh
Q 023472 179 ALLCLLVGLIAVGRIYLGMH-SLVDIIAGLALGLAVLAFWLTVHEY 223 (281)
Q Consensus 179 ~~~~~~~~lv~~SRvylG~H-~~sDVi~G~~lG~~~~~~~~~~~~~ 223 (281)
++.-+.++.+|++|+..|.+ ...+.++++++.+.+.+..+.+.+-
T Consensus 1044 ~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kG 1089 (1135)
T PLN02248 1044 MMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKG 1089 (1135)
T ss_pred HHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45566788899999988864 2357777777777777777777663
No 57
>PHA00407 phage lambda Rz1-like protein
Probab=21.68 E-value=1.2e+02 Score=21.24 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=11.6
Q ss_pred cchhhhHHHHHHHHHH
Q 023472 2 ESVLAAWQVATLGGIV 17 (281)
Q Consensus 2 ~~~~~~~~~~~~~~i~ 17 (281)
+.|.++|+.++++.++
T Consensus 25 kktl~rwkaaLIGlll 40 (84)
T PHA00407 25 KKTLRRWKAALIGLLL 40 (84)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 5688999977666544
No 58
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.94 E-value=98 Score=23.93 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 023472 203 IIAGLALGLAVLAFWLTVH 221 (281)
Q Consensus 203 Vi~G~~lG~~~~~~~~~~~ 221 (281)
++.|+++|++++++..++.
T Consensus 2 ~~i~lvvG~iiG~~~~r~~ 20 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLT 20 (128)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 4667777777777766554
No 59
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=20.32 E-value=2.2e+02 Score=29.37 Aligned_cols=28 Identities=18% Similarity=0.134 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 023472 199 SLVDIIAGLALGLAVLAFWLTVHEYVDN 226 (281)
Q Consensus 199 ~~sDVi~G~~lG~~~~~~~~~~~~~~~~ 226 (281)
..-.+++|.++|++++++..++.++.++
T Consensus 208 ~L~~i~~GiliG~vvG~l~~~Ll~~l~r 235 (810)
T TIGR00844 208 ILWECIFGSILGCIIGYCGRKAIRFAEG 235 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456778888888888877777666553
Done!