Query 023472
Match_columns 281
No_of_seqs 216 out of 1711
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:22:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2t_A Acid phosphatase; all a 99.9 1.8E-22 6.1E-27 173.0 10.9 161 44-218 42-209 (231)
2 2ipb_A PHON protein, class A n 99.9 1.1E-21 3.9E-26 167.9 12.8 163 44-218 30-197 (230)
3 1qi9_A Protein (vanadium bromo 99.5 2.3E-14 7.9E-19 134.7 7.9 110 109-218 378-506 (556)
4 1up8_A Vanadium-dependent brom 99.2 2.8E-11 9.7E-16 114.0 9.3 81 137-217 477-572 (598)
5 3bb0_A Vanadium chloroperoxida 99.1 1.8E-10 6.3E-15 109.7 7.8 107 105-213 346-511 (609)
6 2lx0_A Membrane fusion protein 27.2 76 0.0026 16.8 3.4 27 197-223 2-28 (32)
7 3s8f_B Cytochrome C oxidase su 8.8 2.1E+02 0.0073 22.1 2.8 30 173-202 18-49 (168)
8 2lq2_A De novo designed antifr 8.7 1.7E+02 0.0059 15.1 1.4 21 257-277 8-28 (30)
9 2k1k_A Ephrin type-A receptor 8.3 2.3E+02 0.0078 16.1 2.0 18 262-279 10-27 (38)
10 2kr6_A Presenilin-1; protease, 8.2 7.4E+02 0.025 19.2 5.8 52 72-123 92-145 (176)
No 1
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=99.88 E-value=1.8e-22 Score=173.01 Aligned_cols=161 Identities=16% Similarity=-0.049 Sum_probs=108.3
Q ss_pred hhcChHHHHHHHhh-cchhHHHHHHHHhhhchHHHHHHHHHHHHHhcC--hHHHHHHHHHHHH--HH-HHHHHHHhhcCC
Q 023472 44 VIIGTAFILQIQKY-QHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGH--VKLARHMTLLMAF--CD-YLGNTIKDTVSA 117 (281)
Q Consensus 44 ~~~d~~i~~~lq~~-~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~~~~--~~~~~~l~~~~~~--~~-~l~~~lK~~~~~ 117 (281)
.+.|.+++.++|+. ++|..+..+...+..++...+.+... +.+... ++......+...+ +. .++..+|..++|
T Consensus 42 ~~~D~~~~~~i~~~~~~~~~~~a~~~~t~~~~~~~~~~~~~-l~~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r 120 (231)
T 1d2t_A 42 FLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAFSGA-FGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMR 120 (231)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHCCHHHHHHHTHHH-HTSCCSTTTCHHHHHHHHHTHHHHHTTTTHHHHHHHCC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHhhccCchhHHHHHHHH-HccccChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45799999999987 57888999998888877544333322 233222 2122222222222 23 678899999999
Q ss_pred CCCCCCCC-ccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcC
Q 023472 118 PRPSCPPV-RRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLG 196 (281)
Q Consensus 118 pRP~~~~~-~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG 196 (281)
|||..... ...... .+..+..++||||||++.+++++.++....++ + + .....++..+++||+|+|
T Consensus 121 ~RP~~~~~~~~~~p~-~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~----~----~----~~~~~~a~~v~~SRvylG 187 (231)
T 1d2t_A 121 IRPFAFYGVSTCNTT-EQDKLSKNGSYPSGHTSIGWATALVLAEINPQ----R----Q----NEILKRGYELGQSRVICG 187 (231)
T ss_dssp CCHHHHHTCCCSCC---CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGG----G----H----HHHHHHHHHHHHHHHHHT
T ss_pred CCcCccCCCCceecC-CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHH----H----H----HHHHHHHHHHHHHHHhcC
Confidence 99974211 111000 01115678999999999999998776654321 1 1 123567789999999999
Q ss_pred ccChHHHHHHHHHHHHHHHHHH
Q 023472 197 MHSLVDIIAGLALGLAVLAFWL 218 (281)
Q Consensus 197 ~H~~sDVi~G~~lG~~~~~~~~ 218 (281)
+|||+||++|.++|..++....
T Consensus 188 vH~psDVlaG~~lG~~~~~~~~ 209 (231)
T 1d2t_A 188 YHWQSDVDAARVVGSAVVATLH 209 (231)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887654
No 2
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=99.86 E-value=1.1e-21 Score=167.89 Aligned_cols=163 Identities=16% Similarity=-0.001 Sum_probs=105.7
Q ss_pred hhcChHHHHHHHhhcchhHHHHHHHHhhhchHHHHHHHHHHHHH---hcChHHHHHHHHHHHH-HH-HHHHHHHhhcCCC
Q 023472 44 VIIGTAFILQIQKYQHKFLDSLFSGLSCVVSVPFYTGFLPLVFW---SGHVKLARHMTLLMAF-CD-YLGNTIKDTVSAP 118 (281)
Q Consensus 44 ~~~d~~i~~~lq~~~~p~l~~~~~~~s~lg~~~~~~~~l~~l~~---~~~~~~~~~l~~~~~~-~~-~l~~~lK~~~~~p 118 (281)
.+.|.++..++|+.+++.....+.....++.+.....+...+.+ +.++.....++..... +. .++..+|..++||
T Consensus 30 ~~~D~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r~ 109 (230)
T 2ipb_A 30 FRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATASAKKYYMRT 109 (230)
T ss_dssp HHHHHHHHHHHHTTTTSHHHHHHHHHHCCSHHHHHHHHHHHHTBCCSTTTCHHHHHHHHHHHHHHHTTTTHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHhcCcchHHHHHHHHhCCcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35799999999998887766666666666654433333333322 2222223333333333 33 7888999999999
Q ss_pred CCCCCCCccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHhHhhcCcc
Q 023472 119 RPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGMH 198 (281)
Q Consensus 119 RP~~~~~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRvylG~H 198 (281)
||.............+.....++||||||++.+++++.++..+.++ + .. ....++..+++||+|+|+|
T Consensus 110 RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~----~---~~-----~~~~~a~~v~~SRv~~G~H 177 (230)
T 2ipb_A 110 RPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPE----R---AQ-----ELARRGWEFGQSRVICGAH 177 (230)
T ss_dssp CHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGG----G---HH-----HHHHHHHHHHHHHHHHTSS
T ss_pred CcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHH----H---HH-----HHHHHHHHHHHHHHhcCcc
Confidence 9974221110000001114678999999999999988776554321 1 11 1345678999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 023472 199 SLVDIIAGLALGLAVLAFWL 218 (281)
Q Consensus 199 ~~sDVi~G~~lG~~~~~~~~ 218 (281)
|++||++|.++|..++....
T Consensus 178 ~~sDVlaG~~lG~~~~~~~~ 197 (230)
T 2ipb_A 178 WQSDVDAGRYVGAVEFARLQ 197 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887654
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=99.50 E-value=2.3e-14 Score=134.75 Aligned_cols=110 Identities=20% Similarity=0.177 Sum_probs=71.7
Q ss_pred HHHHhhcCCCCCCCCC--CccccccccccccccCCCCCcccHHHHHHHHHHHHHHHHHh-----ccCc-----hhHHH--
Q 023472 109 NTIKDTVSAPRPSCPP--VRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSY-----SQNN-----YAVTQ-- 174 (281)
Q Consensus 109 ~~lK~~~~~pRP~~~~--~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~-- 174 (281)
+++|.+++|+||..+. ...+........+..++||||||++.+++++.++..++.+. .+.+ ....+
T Consensus 378 ~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~~r~~ 457 (556)
T 1qi9_A 378 ELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLID 457 (556)
T ss_dssp HHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEEE
T ss_pred hHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhccccccccccccccccccccccc
Confidence 4899999999997531 11110000011145689999999999999998887666321 0000 00000
Q ss_pred ----HHHH-HHHHHHHHHHHHhHhhcCccChHHHHHHHHHHHHHHHHHH
Q 023472 175 ----FAGV-ALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFWL 218 (281)
Q Consensus 175 ----~~~~-~~~~~~~~lv~~SRvylG~H~~sDVi~G~~lG~~~~~~~~ 218 (281)
.... .....++..+++||+|+|+|||+||++|+++|..++....
T Consensus 458 ~~~~~l~~~~~l~~lA~lIg~SRVYlGVHYPSDVlaG~lLG~~va~~vl 506 (556)
T 1qi9_A 458 FRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTL 506 (556)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeehhhHHHHHHHHHHHHHHeeCccCHHHHHHHHHHHHHHHHHHH
Confidence 0000 0134478899999999999999999999999998876654
No 4
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=99.21 E-value=2.8e-11 Score=114.04 Aligned_cols=81 Identities=22% Similarity=0.169 Sum_probs=57.5
Q ss_pred cccCCCCCcccHHHHHHHHHHHHHHHHHhcc---C-------chhHH-----HHHHHHHHHHHHHHHHHhHhhcCccChH
Q 023472 137 NALEYGLPSSHTLNTVCLAGYLLHYVLSYSQ---N-------NYAVT-----QFAGVALLCLLVGLIAVGRIYLGMHSLV 201 (281)
Q Consensus 137 ~~~~~sFPSgHa~~~~~~~~~~~~~~~~~~~---~-------~~~~~-----~~~~~~~~~~~~~lv~~SRvylG~H~~s 201 (281)
...++||||||++.+++.+..+..++.+... . ..+.. ..........++..+++||+|+|+||++
T Consensus 477 tP~~pSYPSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~SRVYlGVHypS 556 (598)
T 1up8_A 477 SPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFS 556 (598)
T ss_dssp SCSSCSSSCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHHhheeeeecHH
Confidence 3468999999999999999887766653320 0 00000 0000023456788999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 023472 202 DIIAGLALGLAVLAFW 217 (281)
Q Consensus 202 DVi~G~~lG~~~~~~~ 217 (281)
||++|+.+|..++...
T Consensus 557 DVlAG~~LG~aVa~~v 572 (598)
T 1up8_A 557 DQFESLLLGEQVAIGI 572 (598)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999876554
No 5
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A
Probab=99.07 E-value=1.8e-10 Score=109.66 Aligned_cols=107 Identities=21% Similarity=0.114 Sum_probs=66.8
Q ss_pred HHHHHHHHhhcCCCCCCC------------CCCccccc----cccccccccCCCCCcccHHHHHHHHHHHHHHHHHh---
Q 023472 105 DYLGNTIKDTVSAPRPSC------------PPVRRVTA----TKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSY--- 165 (281)
Q Consensus 105 ~~l~~~lK~~~~~pRP~~------------~~~~~~~~----~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~~~--- 165 (281)
...+...|..+.|+||.. +....+.. ......+...+||||||++.+.+.+.++..++.+.
T Consensus 346 ~ia~w~~K~~y~R~RP~taI~~~~~~~~~dp~w~~l~~~~~~~~~~~~tP~~pSYPSGHAt~s~A~A~vL~~~f~~~~~~ 425 (609)
T 3bb0_A 346 GIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGT 425 (609)
T ss_dssp HHHHHHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTSSSCCBCCSSCCSSCHHHHHHHHHHHHHHHHHBTTTBC
T ss_pred HHHHHHHhhhhcCCCcCchhhcccccccCCccchhhcccccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhccccc
Confidence 334456899999999953 11110000 00001245679999999999999998887666100
Q ss_pred ----ccCchh------------------------------------HHHHHHHHHHHHHHHHHHHhHhhcCccChHHHHH
Q 023472 166 ----SQNNYA------------------------------------VTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIA 205 (281)
Q Consensus 166 ----~~~~~~------------------------------------~~~~~~~~~~~~~~~lv~~SRvylG~H~~sDVi~ 205 (281)
...+.. ..+.+ .....++..+++||+|+|+||++|+.+
T Consensus 426 ~~~~G~d~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~r~~--~sl~~~A~e~g~SRIY~GVHypsDv~a 503 (609)
T 3bb0_A 426 WKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHF--DSAWELMFENAISRIFLGVHWRFDAAA 503 (609)
T ss_dssp CCTTSCCCCCEEEEECTTSSSSCEEESSCCCTTSCGGGSCEEECCCCEEEE--SCHHHHHHHHHHHHHHTTSSCHHHHSC
T ss_pred ccccCccccceeecccccccccccccccccccccccccccccccccchhhH--HHHHHHHHHHhhhhheeeeeCHHHHHH
Confidence 000000 00000 012346788999999999999999999
Q ss_pred HHHHHHHH
Q 023472 206 GLALGLAV 213 (281)
Q Consensus 206 G~~lG~~~ 213 (281)
|..+|..+
T Consensus 504 G~~lG~~~ 511 (609)
T 3bb0_A 504 ARDILIPT 511 (609)
T ss_dssp HHHHBCBC
T ss_pred HHHHHHhh
Confidence 99999655
No 6
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=27.18 E-value=76 Score=16.76 Aligned_cols=27 Identities=37% Similarity=0.579 Sum_probs=15.9
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHh
Q 023472 197 MHSLVDIIAGLALGLAVLAFWLTVHEY 223 (281)
Q Consensus 197 ~H~~sDVi~G~~lG~~~~~~~~~~~~~ 223 (281)
-|+.=+|++|.+-=.....+.+++.++
T Consensus 2 khtiweviaglvalltflafgfwlfky 28 (32)
T 2lx0_A 2 KHTIWEVIAGLVALLTFLAFGFWLFKY 28 (32)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377778888876544444444444443
No 7
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=8.84 E-value=2.1e+02 Score=22.10 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhh--cCccChHH
Q 023472 173 TQFAGVALLCLLVGLIAVGRIY--LGMHSLVD 202 (281)
Q Consensus 173 ~~~~~~~~~~~~~~lv~~SRvy--lG~H~~sD 202 (281)
|..++..+.+++...++++-+. .|.|-|+|
T Consensus 18 w~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 49 (168)
T 3s8f_B 18 WLAFSLAMLFVFIALIAYTLATHTAGVIPAGK 49 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGGGGGSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCcCCCc
Confidence 4334445556667788888888 99999987
No 8
>2lq2_A De novo designed antifreeze peptide 4M; AFP, antifreeze protein; NMR {Synthetic}
Probab=8.72 E-value=1.7e+02 Score=15.14 Aligned_cols=21 Identities=29% Similarity=0.216 Sum_probs=13.3
Q ss_pred CChhhHHHHHHHHHHHHhhhh
Q 023472 257 PSFEFHTAFNGVALGIVSTCS 277 (281)
Q Consensus 257 ~~~~~~~~~~g~~~G~~~g~~ 277 (281)
|.|..+.+++|-..--.+.+|
T Consensus 8 pdfpsspailgkaatdvvaaw 28 (30)
T 2lq2_A 8 PDFPSSPAILGKAATDVVAAW 28 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHhhhhHHHHHHHh
Confidence 456777788776655555444
No 9
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=8.33 E-value=2.3e+02 Score=16.08 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhhhh
Q 023472 262 HTAFNGVALGIVSTCSLI 279 (281)
Q Consensus 262 ~~~~~g~~~G~~~g~~~~ 279 (281)
..++.|.++|..+|--+|
T Consensus 10 ~GaIAGiVvG~v~gv~li 27 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALL 27 (38)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHHHH
Confidence 566778888777765544
No 10
>2kr6_A Presenilin-1; protease, alternative splicing, alzheimer disease, amyloidos apoptosis, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=8.24 E-value=7.4e+02 Score=19.24 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=28.8
Q ss_pred hchHHHHHHHHHHHH--HhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023472 72 VVSVPFYTGFLPLVF--WSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCP 123 (281)
Q Consensus 72 lg~~~~~~~~l~~l~--~~~~~~~~~~l~~~~~~~~~l~~~lK~~~~~pRP~~~ 123 (281)
+||..||.+++.-.. ...++.....-.+++.++..++..+=..++++-|.-|
T Consensus 92 LGDFIFYSvLVgkAa~~~~~d~~t~~ac~vaIL~GL~~TL~lLa~~~~aLPALP 145 (176)
T 2kr6_A 92 LGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALP 145 (176)
T ss_dssp TTTHHHHHHHHHHHHHHSCCTTTTHHHHHHHHHHHHHHHHHHHHHHTCSCSSSS
T ss_pred ccCeeehHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Confidence 578888877665433 2234433333334445555555555556777777644
Done!