BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023481
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
GN=PSBS PE=1 SV=1
Length = 274
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/284 (74%), Positives = 237/284 (83%), Gaps = 14/284 (4%)
Query: 1 MAQTMLLM-SGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSS 59
MAQ MLLM GVST++ +LKR++L+ Q Q ++PK + SN + +SSSS
Sbjct: 1 MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPK-------SSTSNLFFSPLPSSSSS 53
Query: 60 K--AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
F T+ALFKSK KAP K +K K KVEDG+FGTSGG GFTK+NELFVGRVAMIGFA
Sbjct: 54 SSTVFKTLALFKSKAKAPKKVEK--PKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFA 111
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGEGITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDEP
Sbjct: 112 ASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPT-- 169
Query: 178 TGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
TGL AVIPPGK +RSALGLK GP+FGFTKSNELFVGRLAQLG AFSLIGEIITGKGAL
Sbjct: 170 TGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGAL 229
Query: 238 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
AQLNIETG+PINEIEPLVL NV+FFF+AA+NPGTGKF+TD++EE
Sbjct: 230 AQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273
>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum
GN=PSBS PE=2 SV=1
Length = 274
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/281 (72%), Positives = 229/281 (81%), Gaps = 7/281 (2%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L + +A+A++SS
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSFFLPSLPLKYPSASASASSHF 53
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+TVALFKSK KAP K + K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASL
Sbjct: 54 TSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKF+D+P PTGL
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGL 173
Query: 181 GGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQL 240
AVIPPGKG +SALGL EGGP+F FTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQL
Sbjct: 174 DKAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
Query: 241 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
N ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE
Sbjct: 234 NFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274
>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=PSBS PE=1 SV=1
Length = 265
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/282 (73%), Positives = 225/282 (79%), Gaps = 19/282 (6%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL SGV+ H + ++ + +PK H +F LS S A S +
Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
+F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAAS
Sbjct: 47 SFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAAS 104
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTG
Sbjct: 105 LLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTG 162
Query: 180 LGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQ 239
L AVIPPGK +RSALGLKE GP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQ
Sbjct: 163 LEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQ 222
Query: 240 LNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
LNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 223 LNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic OS=Solanum
lycopersicum GN=PSBS PE=3 SV=1
Length = 276
Score = 306 bits (785), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 207/288 (71%), Positives = 229/288 (79%), Gaps = 19/288 (6%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L +++ +SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSSTNASSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKFVD+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITG 233
P PTGL AVIPPGK +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITG
Sbjct: 169 PTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 234 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic OS=Solanum
sogarandinum GN=PSBS PE=2 SV=1
Length = 276
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/288 (70%), Positives = 226/288 (78%), Gaps = 19/288 (6%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L ++ SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSTTNFSSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+F+D+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITG 233
P TGL AVIPPGK +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITG
Sbjct: 169 PAPATGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 234 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora paradoxa GN=ycf17 PE=3
SV=1
Length = 49
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT E + GR+AM+GF A+LL E +TG+G L
Sbjct: 10 WGFTSGAENWNGRLAMLGFIAALLTESLTGQGTL 43
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 204 FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNI 242
+GFT E + GRLA LG +L+ E +TG+G L L I
Sbjct: 10 WGFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGI 48
>sp|P51355|YCF17_PORPU Uncharacterized protein ycf17 OS=Porphyra purpurea GN=ycf17 PE=3
SV=1
Length = 48
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT E + GR AMIGF A + E +TGKG+L
Sbjct: 8 WGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLL 41
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 197 LKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
+K+ +GFT S E + GR A +G + E++TGKG L
Sbjct: 1 MKKNFWFWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLL 41
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 151 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLADD 202
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
FG K EL GRLA L + + I+TGKG L L P+N
Sbjct: 203 PEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVN 251
>sp|P27516|CBR_DUNBA Carotene biosynthesis-related protein CBR, chloroplastic
OS=Dunaliella bardawil GN=CBR PE=1 SV=1
Length = 172
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 38/136 (27%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
GF+ E+ GR+AM+GF A+L E TG+ +L QL + + + L F+LF+
Sbjct: 71 MGFSGAPEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTL-------IALTFVLFS- 122
Query: 158 LGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRL 217
++IP A ++G + FT E+ GR
Sbjct: 123 -----------------------AASLIP-------AFARRKGDAMGPFTPDAEMTNGRF 152
Query: 218 AQLGIAFSLIGEIITG 233
A +G A L+ E I G
Sbjct: 153 AMIGFAAMLVYEGIQG 168
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 203 IFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQL 240
+ GF+ + E+ GRLA LG +L E+ TG+ L QL
Sbjct: 70 VMGFSGAPEIINGRLAMLGFVAALGAELSTGESVLTQL 107
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLL-----------GEGITGKG---ILAQLNLET-GIP- 141
F K EL V R AM+G + GE + KG I +Q L+ G P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPS 152
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G+ + E +P GG+ P LGL E
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDP--------LGLAED 204
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 25/168 (14%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F ++ E+ R AM+G L E + G+ AQ+ E G+
Sbjct: 94 FARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 153
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 154 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDP--------LGLADD 205
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI 248
F K E+ GRLA + + I+TGKG L LN P+
Sbjct: 206 PDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
>sp|Q8YQR8|HEMH_NOSS1 Ferrochelatase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hemH
PE=3 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
S +G T E++ GR+AM+GF A L+ E +TG+G+L + L
Sbjct: 346 SWEWGMTSSAEVWNGRIAMLGFIA-LIIELVTGQGLLHMIGL 386
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 204 FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
+G T S E++ GR+A LG +LI E++TG+G L
Sbjct: 349 WGMTSSAEVWNGRIAMLGF-IALIIELVTGQGLL 381
>sp|Q3MCT9|HEMH_ANAVT Ferrochelatase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=hemH PE=3 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
S +G T E++ GR+AM+GF A L+ E +TG+G+L + L
Sbjct: 346 SWEWGMTSSAEVWNGRIAMLGFIA-LIIELVTGQGLLHMIGL 386
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 204 FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
+G T S E++ GR+A LG +LI E++TG+G L
Sbjct: 349 WGMTSSAEVWNGRIAMLGF-IALIIELVTGQGLL 381
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V GR AM+G + E + G+ +Q+ E G+
Sbjct: 90 FAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPS 149
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 150 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP--------LGLADD 201
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 202 AEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
>sp|B2J9P0|HEMH_NOSP7 Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=hemH PE=3 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 20/104 (19%)
Query: 34 PKPFSHLMF-NPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIF 92
P P +H +F N L+ L A + S S A K K P+ +
Sbjct: 302 PAPNTHPVFINALA--ELVIDALKNPSFKLSQAAQMKKMVKMYPQER------------- 346
Query: 93 GTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G T E++ GR+AM+GF A L+ E ITG G L + L
Sbjct: 347 ---WEWGLTTSAEVWNGRIAMLGFIA-LIIELITGHGFLHMIGL 386
>sp|Q3ALP2|HEMH_SYNSC Ferrochelatase OS=Synechococcus sp. (strain CC9605) GN=hemH PE=3
SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G+ +E++ GR+AM+GF+A LL E I+G+G L L L
Sbjct: 353 WGWNNSSEVWNGRLAMVGFSAFLL-ELISGQGPLHALGL 390
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 34.3 bits (77), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E ++ G+ +Q+ E G+
Sbjct: 81 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 140
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 141 LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP--------LGLADD 192
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 193 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
>sp|Q1XDD2|YCF17_PORYE Uncharacterized protein ycf17 OS=Porphyra yezoensis GN=ycf17 PE=3
SV=1
Length = 48
Score = 34.3 bits (77), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT E + GR AMIGF + + E +TG+G+L
Sbjct: 8 WGFTDSAETWNGRFAMIGFISVIFIEVVTGQGLL 41
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 197 LKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
+K+ ++GFT S E + GR A +G + E++TG+G L
Sbjct: 1 MKKSLWLWGFTDSAETWNGRFAMIGFISVIFIEVVTGQGLL 41
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 64/169 (37%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E GI AQ+ E G+
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPS 152
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDP--------LGLAED 204
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 89/252 (35%), Gaps = 55/252 (21%)
Query: 45 LSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVE---------------- 88
LS+ + AA S+SS F + KT A PK P
Sbjct: 8 LSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPS 67
Query: 89 --------DGIFGTSG------GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL--- 131
D + T+G F ++ E+ R AM+G + E + G+
Sbjct: 68 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 127
Query: 132 -------AQLNLETGIP-------IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
+Q+ E G+ I+ L ++ + L+GA+ G + E +P
Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP 187
Query: 178 TGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
GGA P LGL + F K E+ GRLA + + I+TGKG L
Sbjct: 188 LYPGGAFDP--------LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 238 AQLNIETGIPIN 249
L P+N
Sbjct: 240 ENLADHLADPVN 251
>sp|Q7U5G0|HEMH_SYNPX Ferrochelatase OS=Synechococcus sp. (strain WH8102) GN=hemH PE=3
SV=1
Length = 391
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G+ +E++ GR+AM+GF+A LL E I+G G L L L
Sbjct: 353 WGWNNSSEVWNGRLAMLGFSAFLL-ELISGHGPLHALGL 390
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 148 LLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFT 207
L ++ L+GA+ G + E +P GG+ P LGL E F
Sbjct: 159 LAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDP--------LGLAERPQAFAEL 210
Query: 208 KSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVI 260
K E+ GRLA + + I+TGKG L L P+N L+ N +
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFV 263
>sp|Q0I8L9|HEMH_SYNS3 Ferrochelatase OS=Synechococcus sp. (strain CC9311) GN=hemH PE=3
SV=1
Length = 391
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 76 PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
P T K+ + K E +G+ +E++ GR+AMIGF+A LL E I+G G L +
Sbjct: 340 PTTVKLYPQEKWE---------WGWNNSSEVWNGRLAMIGFSAFLL-ELISGHGPLHAVG 389
Query: 136 L 136
L
Sbjct: 390 L 390
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 64/170 (37%), Gaps = 27/170 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 91 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GAI G + E +P GG P LGL +
Sbjct: 151 LIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDP--------LGLADD 202
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 203 PEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G+ + E +P GG+ P LGL E
Sbjct: 152 LVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDP--------LGLAED 203
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + ++TGKG L L P+N
Sbjct: 204 PEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252
>sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 142 IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLAEDP 205
Query: 202 PIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 206 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F+K EL V R AM+G + E ++ G+ +Q+ E G+
Sbjct: 94 FSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 153
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 154 LVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLADD 205
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 206 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVN 254
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 27/170 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E ++ G+ +Q+ E G+
Sbjct: 88 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 147
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 148 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLADD 199
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 200 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 249
>sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 142 IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLAEDP 205
Query: 202 PIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 206 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=hemH PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G T E++ GR+AM+GF A LL E +TG+G L L L
Sbjct: 349 WGITLNAEVWNGRIAMLGFLA-LLVELLTGRGPLHALGL 386
>sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH
PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G T E++ GR+AM+GF A LL E +TG+G L L L
Sbjct: 349 WGITLNAEVWNGRIAMLGFLA-LLVELLTGRGPLHALGL 386
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F+K EL V R AM+G + E ++ G+ +Q+ E G+
Sbjct: 95 FSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 154
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 155 LVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLADD 206
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 207 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 152 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP--------LGLAED 203
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 204 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 27/170 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ AQ+ E G+
Sbjct: 104 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQ 163
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GAI G + E +P GG P LGL +
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDP--------LGLADD 215
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG + L P+N
Sbjct: 216 PDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 265
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP--------LGLAED 204
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1
Length = 265
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 142 IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 152 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLAEDP 203
Query: 202 PIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 204 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 151 LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLAED 202
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ AQ+ E G+
Sbjct: 100 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 159
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 160 LVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDP--------LGLAED 211
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG + L P+N
Sbjct: 212 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1
Length = 265
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 142 IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 152 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLAEDP 203
Query: 202 PIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 204 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E ++ G+ +Q+ E G+
Sbjct: 89 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 148
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 149 LIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDP--------LGLADD 200
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K EL GRLA + + I+TGKG L L P+N
Sbjct: 201 PEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249
>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type 1 (Fragment)
OS=Cucumis sativus PE=2 SV=1
Length = 206
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 148 LLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFT 207
L ++ L+GA+ G + E +P GG+ P LGL + F
Sbjct: 99 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP--------LGLADDPEAFAEL 150
Query: 208 KSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
K EL GRLA + + I+TGKG L L P+N
Sbjct: 151 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL E
Sbjct: 151 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDP--------LGLAED 202
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 87 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 146
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ + L+GA+ G + E +P GG+ P LGL +
Sbjct: 147 LIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDP--------LGLADD 198
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 199 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 247
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GAI G + E +P GG+ P LGL +
Sbjct: 153 LVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDP--------LGLADD 204
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNN 254
>sp|A0RMH2|ENO_CAMFF Enolase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=eno
PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 180 LGGAVIPPGK--GLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGAL 237
+G A++P G G R AL L++GG FG G L + S+I E I GK A
Sbjct: 32 IGEAIVPSGASTGKREALELRDGGEAFGGK-------GVLKAIKNVNSMIAEEICGKDAY 84
Query: 238 AQLNIETGI 246
Q I+ +
Sbjct: 85 NQKAIDDAM 93
>sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein 1 OS=Mus musculus
GN=Epas1 PE=1 SV=2
Length = 874
Score = 32.3 bits (72), Expect = 3.6, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 175 DEPTGLGGAVIPPGK----GLRSALGLKEGGPIFGFT 207
DEP+ G A++PPG+ GLRS E G + FT
Sbjct: 422 DEPSAYGKAILPPGQPWVSGLRSHSAQSESGSLPAFT 458
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 27/170 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ AQ+ E G+
Sbjct: 104 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQ 163
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
I+ L ++ L+GAI G + E +P GG P LGL +
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDP--------LGLADD 215
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINE 250
F K E+ GRLA + + I+TGKG + L P+N
Sbjct: 216 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 265
>sp|A2C7Q7|HEMH_PROM3 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemH
PE=3 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G +E + GR+AM+GFAA LL E I+G G L + L
Sbjct: 353 WGLNTSSEAWNGRIAMLGFAAFLL-ELISGHGPLHAIGL 390
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 100 FTKQNELFV--GRVAMIGFAASLLGEGITGKGIL----------AQLNLETGIP------ 141
F K EL V R AM+G + E + G+ +Q+ E G+
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 142 -IYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG 200
++ L ++ L+GA+ G + E +P GG+ P LGL +
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP--------LGLADD 204
Query: 201 GPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIN 249
F K E+ GRLA + + I+TGKG L L P+N
Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>sp|Q7V6C6|HEMH_PROMM Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemH
PE=3 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+G +E + GR+AM+GFAA LL E I+G G L + L
Sbjct: 353 WGLNTSSEAWNGRIAMLGFAAFLL-ELISGHGPLHAIGL 390
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,494,803
Number of Sequences: 539616
Number of extensions: 4596342
Number of successful extensions: 13076
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 12910
Number of HSP's gapped (non-prelim): 174
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)